Statistics
TarBase v.8
Help
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.
Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link



Loading... Please wait, this might take a few seconds...



Filters
Clear all
Interactions: 170, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput 		Publications Cell lines Tissues Pred. Score
MYC hsa-miR-4677-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-92a-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-940 low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
HSPA5 hsa-miR-199a-5p low: 1 high: 0 1 1 1 0.679
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Dai B-H et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MYC hsa-let-7b-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-148b-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
E2F1 hsa-miR-149-3p low: 2 high: 0 1 1 1 0.468
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ruey-Jen Lin et al. 2010 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
AKT1 hsa-miR-149-3p low: 2 high: 0 1 1 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ruey-Jen Lin et al. 2010 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
CNTFR hsa-miR-708-5p low: 2 high: 0 1 1 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Li X et al. 2013 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:34551493-34551916 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr9:34551665-34551684 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
GJA1 hsa-miR-1-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Baofeng Yang et al. 2007 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
CTCF hsa-miR-221-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lupini Laura et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr16:67638186-67639117 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
SPARC hsa-miR-29a-3p low: 1 high: 0 1 1 1 0.991
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Christopher L Plaisier et al. 2012 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr5:151663409-151663459 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
WEE1 hsa-miR-221-3p low: 1 high: 0 1 1 1 0.492
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lupini Laura et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr11:9589164-9589187 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
ZEB1 hsa-miR-200b-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Philip A Gregory et al. 2008 RP Kidney HEK293 MDCK N/A
Location Method Result Regulation Validation Type Source
chr10:31527472-31529188 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
GNG12 hsa-miR-708-5p low: 1 high: 0 1 1 1 0.698
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Li X et al. 2013 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:67704507-67705439 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
ANXA1 hsa-miR-221-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lupini Laura et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr9:73170128-73170364 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
RB1 hsa-miR-221-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lupini Laura et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr13:48480093-48481082 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
APAF1 hsa-miR-221-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lupini Laura et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr12:98732439-98733160 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
NNAT hsa-miR-708-5p low: 1 high: 0 1 1 1 0.998
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Li X et al. 2013 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr20:37522767-37523613 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MAPRE1 hsa-miR-92a-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Helwak Aleksandra et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr20:32849794-32849811 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0

Deprecated!

This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.



Close
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept