Statistics
TarBase v.8
Help
Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Previous versions:
This is the latest version of the database. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
The previous version of TarBase (v7, legacy), may be found in this link.
TarBase v6 (legacy) can be downloaded in this link.



Loading... Please wait, this might take a few seconds...



Filters
Clear all
Interactions: 170, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput 		Publications Cell lines Tissues Pred. Score
IRS1 hsa-miR-126-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Jin Zhang et al. 2008 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr2:226736135-226736154 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
RECK hsa-miR-21-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Zhiyu Zhang et al. 2008 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr9:36124062-36124311 Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
MAP2K1 hsa-miR-34a-5p low: 1 high: 0 1 1 1 0.998
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Atsuhiko Ichimura et al. 2010 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr15:66491026-66491228 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MAP2K3 hsa-miR-21-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xu Guangxian et al. 2013 RP Kidney HEK293 HEPG2 N/A
Location Method Result Regulation Validation Type Source
chr17:21312151-21314697 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
CDKN1A hsa-miR-106b-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Wu S et al. 2010 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr6:36685816-36687315 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
E2F1 hsa-miR-20a-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Wu Q. et al. 2013 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
CDKN1A hsa-miR-93-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Wu S et al. 2010 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr6:36685816-36687315 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MMP2 hsa-miR-29a-3p low: 1 high: 0 1 1 1 0.519
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Christopher L Plaisier et al. 2012 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr16:55505720-55505768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MMP2 hsa-miR-29b-3p low: 1 high: 0 1 1 1 0.512
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Christopher L Plaisier et al. 2012 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr16:55505720-55505768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MMP2 hsa-miR-29c-3p low: 1 high: 0 1 1 1 0.524
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Christopher L Plaisier et al. 2012 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr16:55505720-55505768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MYC hsa-miR-34c-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
CTDSP1 hsa-miR-124-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Jaya Visvanathan et al. 2007 RP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
SOX2 hsa-miR-145-5p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
NA et al. 0 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MYC hsa-miR-1248 low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-125a-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-1294 low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
HCN2 hsa-miR-1-3p low: 2 high: 0 2 1 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xiaobin Luo et al. 2008 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr19:617111-617132 Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
Lu Yanjie et al. 2009 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr19:617111-617132 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
MYC hsa-miR-3159 low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-375 low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MYC hsa-miR-455-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Braun J et al. 2014 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr8:127740982-127741405 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept