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Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
Data Download:
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Related Pathways
Publication year
Prediction score
Filters
Selected:
Species: -
Regulation: -
Validation: -
Validated: -
Sources: -
Methods: -
Species: -
Regulation: -
Validation: -
Validated: -
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Methods: -
Remove all 
Species
Method Type
Method
Regulation type
Validation type
Validated as
Source
Publication year
Prediction score
Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qPCR
POSITIVE
INDIRECT
Tarbase 7.0
UNKNOWN
Western Blot
POSITIVE
INDIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898110-110899983 (3UTR)
ccgctcgagATATAAGAACTCTTGCAGTCT
ataagaatgcggccgcACAGAGGATCTTTACATGTTTA
Luciferase Reporter Assay
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898320-110898337 (UNKNOWN)
Dual Luciferase Reporter Assay
AGGCCGAGGTGGGCGGATCACTTGA
GCCACCATGCCTGGCTACT
Luciferase Reporter Assay
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qPCR
POSITIVE
INDIRECT
Tarbase 7.0
UNKNOWN
Western Blot
POSITIVE
INDIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qPCR
POSITIVE
INDIRECT
Tarbase 7.0
UNKNOWN
Western Blot
POSITIVE
INDIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qPCR
NEGATIVE
INDIRECT
Tarbase 7.0
UNKNOWN
Western Blot
NEGATIVE
INDIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qPCR
POSITIVE
INDIRECT
Tarbase 7.0
UNKNOWN
Western Blot
POSITIVE
INDIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
SILAC
POSITIVE
INDIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Western Blot
POSITIVE
INDIRECT
Tarbase 7.0
PDCD4 (hsa)
hsa-miR-21-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Immunohistochemistry
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Microarray
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Microarray//Northern blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//qRT-PCR
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Immunohistochemistry//qRT-PCR//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
GFP reporter assay//Northern blot//qRT-PCR//Western blot//ASO assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//qRT-PCR//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//Westren blot//Reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Sequencing
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//qRT-PCR//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Western blot//Northern blot//qRT-PCR//Luciferase reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Immunoblot//Immunofluorescence//Luciferase reporter assay//qRT-PCR
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//qRT-PCR//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//Reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qRT-PCR//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Immunohistochemistry//qRT-PCR//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
qRT-PCR//Luciferase reporter assay//Western blot
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//qRT-PCR//Quantitative proteomic approach
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//Western blot//Reporter assay;Other//Reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay
Other
UNKNOWN
UNKNOWN
miRTarBase
PDCD4 (hsa)
hsa-miR-21-5p
-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898317-110898337 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Abnova, antibody catalog #: H00027161-M01).Treatment protocol: treated with 1 mM sodium arsenite for 30 minutes.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898317-110898337 (UNKNOWN)
AGO2 immunoprecipitation with monoclonal anti-AGO2 antibody (Millipore clone 9E8.2).
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898317-110898337 (UNKNOWN)
Primary effusion lymphoma cell line BC-1
PAR-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898317-110898337 (UNKNOWN)
B cell lines infected by KSHV virus. AGO Immunoprecipitation using anti-Argonaute 2A8. 4 replicates available
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898317-110898337 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. T1 RNase-treated samples
PAR-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898455-110898483 (UNKNOWN)
Breast carcinoma cell line, Her2 amplified. 3 replicates available.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr10:110898317-110898337 (UNKNOWN)
Breast carcinoma cell line, estrogen receptor positive. 3 replicates available.
HITS-CLIP
POSITIVE
DIRECT
Tarbase 7.0