DIANA TOOLS - MicroT-CDS

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Results: 606 targets for miRNAs hsa-miR-654-3p

. Threshold is set to 0.7.

Name:	hsa-miR-654-3p
Alternative description:	MIMAT0004814
Related names:
miRNA sequence:	uaugucugcugaccaucaccuu
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Breast Neoplasms Colorectal Neoplasms Disease Progression Genetic Predisposition to Disease Hematologic Neoplasms Lupus Nephritis Muscular Diseases Neoplasms, Hormone-Dependent Prostatic Neoplasms Sheep Diseases

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000118922 (KLF12)

hsa-miR-654-3p

0.99861195721125

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

9176-9198

0.00358820272832055

Position on chromosome:

13:74269402-74269424

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	UUACCC___CC____GAGC____________	3'
		______GGG___UGG____UCAGU_GACAUA
		______.\|\|___\|\|\|____\|\|\|\|._\|\|\|\|\|\|
		______UCC___ACC____AGUCG_CUGUAU
(miRNA)	3'	_____U___ACU____________U______	5'

UTR3

7mer

9085-9099

0.00985910844963333

Position on chromosome:

13:74269311-74269325

Conserved species:

panTro2,rheMac2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CUUGUACAUUUUC___G____U_U_______U	3'
		_____________UGA____C_G_CAGACAU_
		_____________\|\|\|____\|_\|_\|\|\|\|\|\|\|_
		_____________ACU____G_C_GUCUGUA_
(miRNA)	3'	____________C___ACCA_U_________U	5'

UTR3

6mer

6428-6449

0.00185570994351416

Position on chromosome:

13:74266654-74266675

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGAAAAG____AGAAUCCUAAA_______	3'
		_______CAGU___________GGACAUA
		_______\|\|\|.___________.\|\|\|\|\|\|
		_______GUCG___________UCUGUAU
(miRNA)	3'	______A______________________	5'

UTR3

6mer

3397-3404

0.00211550221086126

Position on chromosome:

13:74263623-74263630

Conserved species:

rheMac2,mm9,loxAfr3

Binding area:

(Transcript)	5'	UAUACAAUGAGACUAUAUGAA________	3'
		_____________________UAGACAUG
		_____________________.\|\|\|\|\|\|.
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

UTR3

6mer

2875-2893

0.00064734933261771

Position on chromosome:

13:74263101-74263119

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	ACACUUUAUG_____GAAA___________	3'
		__________GAUGG____CGG_AGACAUG
		__________\|\|\|\|\|____\|.\|_\|\|\|\|\|\|.
		__________CUACC____GUC_UCUGUAU
(miRNA)	3'	_________A_____A______G_______	5'

UTR3

6mer

2408-2414

0.00185519950278137

Position on chromosome:

13:74262634-74262640

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUGUAUACCUUUCCACCAAUA_______U	3'
		_____________________UAGACAU_
		_____________________.\|\|\|\|\|\|_
		_____________________GUCUGUA_
(miRNA)	3'	____________________C_______U	5'

UTR3

6mer

1534-1556

0.00203722835264398

Position on chromosome:

13:74261760-74261782

Conserved species:

panTro2,oryCun2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	AUCAAA___UAA___AUU____________	3'
		______AAG___GAU___UUAG_GGACAUA
		______\|\|\|___\|\|\|___\|.\|\|_.\|\|\|\|\|\|
		______UUC___CUA___AGUC_UCUGUAU
(miRNA)	3'	_________CA____CC_____G_______	5'

UTR3

8mer

149-164

0.0962656871473047

Position on chromosome:

13:74260375-74260390

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUAUUGUUUUUAA________U_________	3'
		_____________UGGU_GUC__CAGACAUA
		_____________\|\|.\|_\|\|\|__\|\|\|\|\|\|\|\|
		_____________ACUA_CAG__GUCUGUAU
(miRNA)	3'	____________C____C___UC________	5'

ENSG00000166747 (AP1G1)

hsa-miR-654-3p

0.993355653296356

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

173-197

0.0933066199530704

Position on chromosome:

16:71763086-71763110

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CUAA___A_C__UAAUUAUU_________	3'
		____UGA_G_UC________GCAGACAUA
		____\|\|\|_\|_\|\|________\|\|\|\|\|\|\|\|\|
		____ACU_C_AG________CGUCUGUAU
(miRNA)	3'	___C___A_C__U________________	5'

UTR3

7mer

1845-1864

0.00483936726832806

Position on chromosome:

16:71803544-71803563

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAGAAAUGU____GCGA___CC________	3'
		_________GUGA_____AG__CAGACAUG
		_________\|\|\|\|_____\|\|__\|\|\|\|\|\|\|.
		_________CACU_____UC__GUCUGUAU
(miRNA)	3'	________C____ACCAG____________	5'

ENSG00000145860 (RNF145)

hsa-miR-654-3p

0.992407572625862

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

35-54

0.0903495599880024

Position on chromosome:

5:158584452-158584471

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GCAAAUUUG_________ACUGA________	3'
		_________GAUG__UAG_____CAGACAUA
		_________\|\|\|\|__.\|\|_____\|\|\|\|\|\|\|\|
		_________CUAC__GUC_____GUCUGUAU
(miRNA)	3'	________A____CA________________	5'

ENSG00000144134 (RABL2A)

hsa-miR-654-3p

0.991715682056017

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

108-135

0.0889127568465816

Position on chromosome:

2:114392688;114398930-114392707;114398937

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	A___CCC___CCUGCA___U_________	3'
		_AGG___AUG______UCA_GCAGACAUA
		_\|\|\|___\|\|\|______\|\|\|_\|\|\|\|\|\|\|\|\|
		_UCC___UAC______AGU_CGUCUGUAU
(miRNA)	3'	U___AC____C__________________	5'

ENSG00000100462 (PRMT5)

hsa-miR-654-3p

0.991460553687392

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

990-1017

0.0604354158782912

Position on chromosome:

14:23393887-23393914

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,fr2

Binding area:

(Transcript)	5'	C______ACAAUCUGGAA__U_________	3'
		_UGAUGG___________UC__CAGACAUA
		_\|\|\|\|\|\|___________\|\|__\|\|\|\|\|\|\|\|
		_ACUACC___________AG__GUCUGUAU
(miRNA)	3'	C___________________UC________	5'

UTR3

7mer

701-724

0.0110041828945483

Position on chromosome:

14:23393332-23393355

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,monDom5

Binding area:

(Transcript)	5'	GCCAA____CCGUA___UCAU________	3'
		_____GUGA_____GUC____CAGACAUG
		_____\|\|\|\|_____\|\|\|____\|\|\|\|\|\|\|.
		_____CACU_____CAG____GUCUGUAU
(miRNA)	3'	____C____AC______UC__________	5'

UTR3

8mer

669-693

0.0169732106929605

Position on chromosome:

14:23393300-23393324

Conserved species:

panTro2,rheMac2,rn4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAU______CUCCAGAGAA_________C	3'
		___GGGUGG__________AGCAGACAU_
		___.\|\|\|\|.__________\|\|\|\|\|\|\|\|\|_
		___UCCACU__________UCGUCUGUA_
(miRNA)	3'	__U______ACCAG______________U	5'

ENSG00000115486 (GGCX)

hsa-miR-654-3p

0.988482406209155

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

4499-4526

0.00536001535137507

Position on chromosome:

2:85776345-85776372

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	A_____AAAAUAAUU__CC__A________	3'
		_GAGGU_________UG__CG__AGACAUA
		_.\|\|\|\|_________\|\|__\|.__\|\|\|\|\|\|\|
		_UUCCA_________AC__GU__UCUGUAU
(miRNA)	3'	______CU_________CA__CG_______	5'

UTR3

6mer

4073-4097

0.00241085714560261

Position on chromosome:

2:85775919-85775943

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGU________UA__GAAU__UU______U	3'
		___AAGG_GAU__GG____GC__AGACAU_
		___\|\|\|\|_\|\|\|__\|\|____\|\|__\|\|\|\|\|\|_
		___UUCC_CUA__CC____CG__UCUGUA_
(miRNA)	3'	_______A_______AGU___________U	5'

UTR3

6mer

3300-3313

0.00136975840108534

Position on chromosome:

2:85775146-85775159

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUAAUUUUUGUAUUU_____AG_______	3'
		_______________UUAGU__AGACAUG
		_______________\|.\|\|.__\|\|\|\|\|\|.
		_______________AGUCG__UCUGUAU
(miRNA)	3'	______________C______________	5'

UTR3

6mer

2468-2486

0.00165823959463366

Position on chromosome:

2:85774314-85774332

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUAUACAGA___U___ACCUAA______U	3'
		_________AUG_UCA______AGACAU_
		_________\|\|\|_\|\|\|______\|\|\|\|\|\|_
		_________UAC_AGU______UCUGUA_
(miRNA)	3'	________C___C___CG__________U	5'

UTR3

6mer

1024-1041

0.00240070276579931

Position on chromosome:

2:85772870-85772887

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUAAAUUGCC___ACU_______A_______U	3'
		__________AGG______UUAG_UAGACAU_
		__________\|\|\|______\|.\|\|_.\|\|\|\|\|\|_
		__________UCC______AGUC_GUCUGUA_
(miRNA)	3'	_________U___ACUACC____________U	5'

UTR3

8mer

493-516

0.071105149547933

Position on chromosome:

2:85772339-85772362

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UAAAC__U___AAU_G__AAC________	3'
		_____UG_UGG___U_AG___CAGACAUA
		_____\|\|_\|\|\|___\|_\|\|___\|\|\|\|\|\|\|\|
		_____AC_ACC___A_UC___GUCUGUAU
(miRNA)	3'	____C__U_______G_____________	5'

UTR3

8mer

948-973

0.00761668302390723

Position on chromosome:

2:85779649-85779674

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUC__C_____AAGGA___U_________	3'
		___GG_GAUGG_____UCA_GCAGACAUG
		___\|\|_\|\|\|\|\|_____\|\|\|_\|\|\|\|\|\|\|\|.
		___CC_CUACC_____AGU_CGUCUGUAU
(miRNA)	3'	__U__A_______________________	5'

ENSG00000203827 (NBPF16)

hsa-miR-654-3p

0.987327935472353

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

85-100

0.0448537298650382

Position on chromosome:

1:148756770-148756785

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUACAGUUCCAUU___A___CC________	3'
		_____________UGG__AG__CAGACAUA
		_____________\|\|\|__\|\|__\|\|\|\|\|\|\|\|
		_____________ACC__UC__GUCUGUAU
(miRNA)	3'	____________U___AG____________	5'

UTR3

7mer

226-245

0.0376773899560672

Position on chromosome:

1:148756911-148756930

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACAUGCC___A___________U_______U	3'
		________GGG_GUGA___UCAG_CAGACAU_
		________..\|_\|\|\|\|___\|\|\|\|_\|\|\|\|\|\|\|_
		________UUC_CACU___AGUC_GUCUGUA_
(miRNA)	3'	________________ACC____________U	5'

UTR3

8mer

971-992

0.00640307209491763

Position on chromosome:

1:148749979;148751038-148749995;148751042

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUGCAU__C__U__ACAUA_________C	3'
		______GG_UG_UG_____GGCAGACAU_
		______\|\|_\|\|_\|\|_____.\|\|\|\|\|\|\|\|_
		______CC_AC_AC_____UCGUCUGUA_
(miRNA)	3'	_____U_____U__CAG___________U	5'

ENSG00000203832 (NBPF20)

hsa-miR-654-3p

0.986724792988833

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1525-1540

0.0512533144244846

Position on chromosome:

1:148251774-148251789

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUACAGUUCCAUU___A___CC________	3'
		_____________UGG__AG__CAGACAUA
		_____________\|\|\|__\|\|__\|\|\|\|\|\|\|\|
		_____________ACC__UC__GUCUGUAU
(miRNA)	3'	____________U___AG____________	5'

UTR3

7mer

1380-1399

0.0270538205273647

Position on chromosome:

1:148251629-148251648

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACAUGCC___A___________U_______U	3'
		________GGG_GUGA___UCAG_CAGACAU_
		________..\|_\|\|\|\|___\|\|\|\|_\|\|\|\|\|\|\|_
		________UUC_CACU___AGUC_GUCUGUA_
(miRNA)	3'	________________ACC____________U	5'

UTR3

6mer

175-196

0.00326903486166859

Position on chromosome:

1:148250424-148250445

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUCUGC__U__CAAAA__AAGA______U	3'
		______UG_UG_____AG____AGACAU_
		______\|\|_\|\|_____\|\|____\|\|\|\|\|\|_
		______AC_AC_____UC____UCUGUA_
(miRNA)	3'	_____C__U__CAG____G_________U	5'

UTR3

8mer

12060-12081

0.00479154665141552

Position on chromosome:

1:148329077;148330124-148329081;148330140

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUGCAU__C__U__ACAUA_________C	3'
		______GG_UG_UG_____GGCAGACAU_
		______\|\|_\|\|_\|\|_____.\|\|\|\|\|\|\|\|_
		______CC_AC_AC_____UCGUCUGUA_
(miRNA)	3'	_____U_____U__CAG___________U	5'

ENSG00000101624 (CEP76)

hsa-miR-654-3p

0.983831127679092

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2630-2651

0.0778527111331304

Position on chromosome:

18:12697325-12697346

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	UUCAUAU____CUAA___AAA________	3'
		_______GGUG____UCA___CAGACAUA
		_______\|\|\|\|____\|\|\|___\|\|\|\|\|\|\|\|
		_______CCAC____AGU___GUCUGUAU
(miRNA)	3'	______U____UACC___C__________	5'

ENSG00000143195 (ILDR2)

hsa-miR-654-3p

0.981295609801947

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

6109-6124

0.00978252084704362

Position on chromosome:

1:166888552-166888567

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUCUCUGGAUAA___GAAAU__________	3'
		_____________UGA_______CAGACAUG
		_____________\|\|\|_______\|\|\|\|\|\|\|.
		_____________ACU_______GUCUGUAU
(miRNA)	3'	____________C___ACCAGUC________	5'

UTR3

6mer

5397-5407

0.00374973787780557

Position on chromosome:

1:166887840-166887850

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACAUGUCAAUAUCGGA___U________U	3'
		_________________GUC__UAGACAU_
		_________________\|\|\|__.\|\|\|\|\|\|_
		_________________CAG__GUCUGUA_
(miRNA)	3'	________________C___UC_______U	5'

UTR3

8mer

4587-4602

0.00292856655274334

Position on chromosome:

1:166887030-166887045

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCCGUCAACUUCC__C__________________	3'
		_____________AG_UGAU_____GCAGACAUG
		_____________\|\|_\|\|\|\|_____\|\|\|\|\|\|\|\|.
		_____________UC_ACUA_____CGUCUGUAU
(miRNA)	3'	____________U__C____CCAGU_________	5'

UTR3

7mer

3255-3277

0.00689480852577358

Position on chromosome:

1:166885698-166885720

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AGUACA___UAAAUCU__U__A__________	3'
		______AAG_______UG_GU____AGACAUA
		______\|\|\|_______\|\|_\|\|____\|\|\|\|\|\|\|
		______UUC_______AC_CA____UCUGUAU
(miRNA)	3'	_________CACU________GUCG_______	5'

UTR3

6mer

3207-3223

0.00106173204625192

Position on chromosome:

1:166885650-166885666

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCGUAAUUUAAU_________AA_UA_______	3'
		____________AGG____GG__A__AGACAUG
		____________\|\|\|____\|\|__\|__\|\|\|\|\|\|.
		____________UCC____CC__U__UCUGUAU
(miRNA)	3'	___________U___ACUA__AG_CG_______	5'

UTR3

6mer

2621-2645

0.00127978465585014

Position on chromosome:

1:166885064-166885088

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCA____CC___CUGU___CUU______	3'
		____UGAU__UCA____GCA___GACAUA
		____\|\|\|\|__\|\|\|____\|\|\|___\|\|\|\|\|\|
		____ACUA__AGU____CGU___CUGUAU
(miRNA)	3'	___C____CC___________________	5'

UTR3

7mer

1098-1108

0.00440041629893362

Position on chromosome:

1:166883541-166883551

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUUCCAGUUUCUCUUCA___C_______C	3'
		_________________CAG_CAGACAU_
		_________________\|\|\|_\|\|\|\|\|\|\|_
		_________________GUC_GUCUGUA_
(miRNA)	3'	________________A___________U	5'

UTR3

7mer

646-665

0.00927300578035968

Position on chromosome:

1:166883089-166883108

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGCCUAAA___C____AUUA________	3'
		_________GUG_UGGU____CAGACAUG
		_________\|\|\|_\|\|\|\|____\|\|\|\|\|\|\|.
		_________CAC_ACCA____GUCUGUAU
(miRNA)	3'	________C___U____GUC_________	5'

UTR3

8mer

51-58

0.0360591340983366

Position on chromosome:

1:166882494-166882501

Conserved species:

panTro2,dasNov2

Binding area:

(Transcript)	5'	CAUGACUUUUUUUUUCUGUGU________	3'
		_____________________CAGACAUA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

ENSG00000167230 (C17orf78)

hsa-miR-654-3p

0.979209381695002

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

88-98

0.0710430620371198

Position on chromosome:

17:35748661-35748671

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,echTel1,monDom5

Binding area:

(Transcript)	5'	GCAGAGAUCACUGUUAUC__C________	3'
		__________________CA_CAGACAUA
		__________________\|\|_\|\|\|\|\|\|\|\|
		__________________GU_GUCUGUAU
(miRNA)	3'	_________________A__C________	5'

UTR3

6mer

438-460

0.00262359281990546

Position on chromosome:

17:35749011-35749033

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	AGAAAC____CAGCU_____UGU______	3'
		______AAGG_____GUUAG___GACAUA
		______\|\|\|\|_____\|\|.\|\|___\|\|\|\|\|\|
		______UUCC_____CAGUC___CUGUAU
(miRNA)	3'	__________ACUAC_____GU_______	5'

ENSG00000182752 (PAPPA)

hsa-miR-654-3p

0.978732935640608

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1938-1964

0.00163063750201973

Position on chromosome:

9:119160834-119160860

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U______CAAAAACACU_G__A______C	3'
		_GGUGAU__________U_AG_AGACAU_
		_\|\|\|\|\|\|__________\|_\|\|_\|\|\|\|\|\|_
		_CCACUA__________A_UC_UCUGUA_
(miRNA)	3'	U______CC_________G__G______U	5'

UTR3

7mer

3675-3693

0.00449982821133477

Position on chromosome:

9:119162571-119162589

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CAAACAUAAA___UUCCC___A_______	3'
		__________GAU_____UAG_AGACAUA
		__________\|\|\|_____.\|\|_\|\|\|\|\|\|\|
		__________CUA_____GUC_UCUGUAU
(miRNA)	3'	_________A___CCA_____G_______	5'

UTR3

6mer

3860-3887

0.00246272642473922

Position on chromosome:

9:119162756-119162783

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	U_____UUUCCAGCUAUUA__G_______	3'
		_UGGUU_____________AG_GGACAUA
		_\|\|\|\|._____________\|\|_.\|\|\|\|\|\|
		_ACCAG_____________UC_UCUGUAU
(miRNA)	3'	U____________________G_______	5'

UTR3

8mer

5498-5519

0.064999144961939

Position on chromosome:

9:119164394-119164415

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUCUAUA___UUUUAAAUACU________	3'
		_______CAG___________CAGACAUA
		_______\|\|\|___________\|\|\|\|\|\|\|\|
		_______GUC___________GUCUGUAU
(miRNA)	3'	______A______________________	5'

UTR3

7mer

980-990

0.00588363616405286

Position on chromosome:

9:118949998-118950008

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUGGAGCCUCCUCUGUG___A_______U	3'
		_________________CGG_CAGACAU_
		_________________\|.\|_\|\|\|\|\|\|\|_
		_________________GUC_GUCUGUA_
(miRNA)	3'	________________A___________U	5'

ENSG00000100567 (PSMA3)

hsa-miR-654-3p

0.976592728953659

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

10-37

0.0632139912989007

Position on chromosome:

14:58724480-58724507

Conserved species:

panTro2,rheMac2,rn4,mm9,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	U__CA____CUCGUUCU____________	3'
		_GG__GAUG________UUAGCAGACAUA
		_\|\|__\|\|\|\|________\|.\|\|\|\|\|\|\|\|\|\|
		_CC__CUAC________AGUCGUCUGUAU
(miRNA)	3'	U__A_____C___________________	5'

UTR3

6mer

416-440

0.00847143937334268

Position on chromosome:

14:58737197;58737652-58737203;58737669

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGUU_____AUUAACUAA___A___________	3'
		____GGUGA_________UGG_____AGACAUG
		____\|\|\|\|\|_________\|\|\|_____\|\|\|\|\|\|.
		____CCACU_________ACC_____UCUGUAU
(miRNA)	3'	___U_________________AGUCG_______	5'

ENSG00000137338 (PGBD1)

hsa-miR-654-3p

0.976585718939133

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

10-28

0.0261727413920181

Position on chromosome:

6:28270072-28270090

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUACAUAAA____A__UAGU________U	3'
		_________AUGG_CA____GCAGACAU_
		_________\|\|\|\|_\|\|____\|\|\|\|\|\|\|\|_
		_________UACC_GU____CGUCUGUA_
(miRNA)	3'	________C____A______________U	5'

UTR3

7mer

22-40

0.0168259392272647

Position on chromosome:

6:28270084-28270102

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	GGACAUAGUG___ACAUUAAUA_______	3'
		__________CAG_________AGACAUA
		__________\|\|\|_________\|\|\|\|\|\|\|
		__________GUC_________UCUGUAU
(miRNA)	3'	_________A___G_______________	5'

UTR3

7mer

128-134

0.018748816862847

Position on chromosome:

6:28270190-28270196

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UUAAAUAAUACUUUUAAAAAU_______U	3'
		_____________________CAGACAU_
		_____________________\|\|\|\|\|\|\|_
		_____________________GUCUGUA_
(miRNA)	3'	____________________C_______U	5'

UTR3

7mer

223-239

0.0106533250516851

Position on chromosome:

6:28270285-28270301

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	UCUCUAUGUCAA__UU__U_____________	3'
		____________GU__UG_GU___CAGACAUG
		____________\|\|__\|\|_\|\|___\|\|\|\|\|\|\|.
		____________CA__AC_CA___GUCUGUAU
(miRNA)	3'	___________C__CU_____GUC________	5'

UTR3

7mer

292-319

0.0101785092760104

Position on chromosome:

6:28251883-28251910

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	A___AGCUC______CCUGUGUGA_______	3'
		_AGG_______CAGC_________AGACAUA
		_\|\|\|_______\|\|\|\|_________\|\|\|\|\|\|\|
		_UCC_______GUCG_________UCUGUAU
(miRNA)	3'	U___ACUACCA____________________	5'

UTR3

7mer

634-645

0.00573361626820639

Position on chromosome:

6:28254938;28264593-28254945;28264596

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUGUUUAACCCAGUCA____C________U	3'
		________________GGUC__CAGACAU_
		________________\|\|\|\|__\|\|\|\|\|\|\|_
		________________CCAG__GUCUGUA_
(miRNA)	3'	_______________A____UC_______U	5'

ENSG00000143321 (HDGF)

hsa-miR-654-3p

0.976040840522085

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

477-489

0.071295312586598

Position on chromosome:

1:156712376-156712388

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CUUAUAGUCAUAUAUA___CC________	3'
		________________UCA__CAGACAUA
		________________\|\|\|__\|\|\|\|\|\|\|\|
		________________AGU__GUCUGUAU
(miRNA)	3'	_______________C___C_________	5'

ENSG00000124507 (PACSIN1)

hsa-miR-654-3p

0.975617626488169

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

82-95

0.0629942330426845

Position on chromosome:

6:34500390-34500403

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CUUCCCCUCGCCAUA__G____UC________	3'
		_______________GA____U__CAGACAUA
		_______________\|\|____.__\|\|\|\|\|\|\|\|
		_______________CU____G__GUCUGUAU
(miRNA)	3'	______________A__ACCA_UC________	5'

UTR3

7mer

591-617

0.00647004615277658

Position on chromosome:

6:34500899-34500925

Conserved species:

panTro2,rheMac2,mm9,canFam2

Binding area:

(Transcript)	5'	UG_____UUCCAGG____CCC________	3'
		__GAGGU_______GGUC___CAGACAUG
		__.\|\|\|\|_______\|\|\|\|___\|\|\|\|\|\|\|.
		__UUCCA_______CCAG___GUCUGUAU
(miRNA)	3'	_______CUA________UC_________	5'

UTR3

6mer

1108-1129

0.00153776607533585

Position on chromosome:

6:34501416-34501437

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCGCAC_____CCUC_____CUG______C	3'
		______GGGUG_____CAGC___AGACAU_
		______.\|\|\|\|_____\|\|\|\|___\|\|\|\|\|\|_
		______UCCAC_____GUCG___UCUGUA_
(miRNA)	3'	_____U_____UACCA_____________U	5'

ENSG00000055609 (KMT2C)

hsa-miR-654-3p

0.973281586510601

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

14058-14071

0.0207210014148529

Position on chromosome:

7:151935859-151935872

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGAGCCCACCUUCC_____CC_______U	3'
		______________UGGUC__CAGACAU_
		______________\|\|\|\|\|__\|\|\|\|\|\|\|_
		______________ACCAG__GUCUGUA_
(miRNA)	3'	_____________U_____UC_______U	5'

UTR3

6mer

13553-13569

0.00570074734843502

Position on chromosome:

7:151921588-151921604

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GACUCCUGCUGU______ACU__________	3'
		____________GUGAUG____GU_GACAUA
		____________\|\|\|\|\|\|____\|._\|\|\|\|\|\|
		____________CACUAC____CG_CUGUAU
(miRNA)	3'	___________C______CAGU__U______	5'

UTR3

8mer

13257-13284

0.0221033420455699

Position on chromosome:

7:151919705-151919732

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	____AAGAA____AAAAUG__________U	3'
		_AGG_____GUGG______UAGCAGACAU_
		_\|\|\|_____.\|\|\|______.\|\|\|\|\|\|\|\|\|_
		_UCC_____UACC______GUCGUCUGUA_
(miRNA)	3'	U___AC_______A_______________U	5'

UTR3

7mer

12975-13002

0.0058288464045878

Position on chromosome:

7:151917652-151917679

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	____CCGUCCU____ACCCCUC_______C	3'
		_UGG_______UCAG_______CAGACAU_
		_\|\|\|_______\|\|\|\|_______\|\|\|\|\|\|\|_
		_ACC_______AGUC_______GUCUGUA_
(miRNA)	3'	U____________________________U	5'

UTR3

7mer

8953-8980

0.00411570402138947

Position on chromosome:

7:151874848-151874875

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	G__C_A___AUAUAUUGAACUG_______	3'
		_GG_C_AGC_____________AGACAUA
		_\|\|_\|_\|\|\|_____________\|\|\|\|\|\|\|
		_CC_G_UCG_____________UCUGUAU
(miRNA)	3'	A__A_________________________	5'

UTR3

6mer

8872-8896

0.000954023974215023

Position on chromosome:

7:151874767-151874791

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UGUA____CAUCUUCUAA__U_________	3'
		____GAGG__________UC_G_AGACAUG
		____.\|\|\|__________\|\|_\|_\|\|\|\|\|\|.
		____UUCC__________AG_C_UCUGUAU
(miRNA)	3'	________ACUACC______U_G_______	5'

UTR3

7mer

7848-7862

0.00648209643909018

Position on chromosome:

7:151873743-151873757

Conserved species:

panTro2,rheMac2,mm9,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CUAAUGAGAAAUC____AAUU_________U	3'
		_____________UGAU______CAGACAU_
		_____________\|\|\|\|______\|\|\|\|\|\|\|_
		_____________ACUA______GUCUGUA_
(miRNA)	3'	____________C____CCAGUC_______U	5'

UTR3

6mer

2271-2294

0.00398227700898735

Position on chromosome:

7:151836848-151836871

Conserved species:

rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	GGCU___CCUGUA__C__C___________U	3'
		____GGG______UG_UG_UCG__AGACAU_
		____.\|\|______\|\|_\|\|_\|\|.__\|\|\|\|\|\|_
		____UCC______AC_AC_AGU__UCUGUA_
(miRNA)	3'	___U___________U__C___CG______U	5'

UTR3

9mer

152-163

0.0132222431957832

Position on chromosome:

7:151945191-151945202

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AGUCAUCAUUUUCAUCA____________	3'
		_________________UCAGCAGACAUA
		_________________\|\|\|\|\|\|\|\|\|\|\|\|
		_________________AGUCGUCUGUAU
(miRNA)	3'	________________C____________	5'

ENSG00000115750 (TAF1B)

hsa-miR-654-3p

0.970256326883907

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

135-148

0.0676635253066445

Position on chromosome:

2:10045055-10045068

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUUAGAUUUGCCUC___UUC________	3'
		_______________GUU___CAGACAUA
		_______________\|\|.___\|\|\|\|\|\|\|\|
		_______________CAG___GUCUGUAU
(miRNA)	3'	______________C___UC_________	5'

ENSG00000116991 (SIPA1L2)

hsa-miR-654-3p

0.970213248438607

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

730-737

0.0676391454419693

Position on chromosome:

1:232534441-232534448

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AUAAACAUGAGAACAAAUAAU________	3'
		_____________________CAGACAUA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

ENSG00000005189 (AC004381.6)

hsa-miR-654-3p

0.970133051717661

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

36-62

0.0675938497135506

Position on chromosome:

16:20826350-20826376

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,monDom5

Binding area:

(Transcript)	5'	UG____UCU___AAAAGCAUU________	3'
		__GAUG___UCG_________CAGACAUA
		__\|\|\|\|___\|\|._________\|\|\|\|\|\|\|\|
		__CUAC___AGU_________GUCUGUAU
(miRNA)	3'	_A____C_____C________________	5'

ENSG00000182963 (GJC1)

hsa-miR-654-3p

0.969705602541698

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

5914-5935

0.0474744617196317

Position on chromosome:

17:42881730-42881751

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCUUCCA__UC___AGA__AA________	3'
		_______GA__UGG___AG__CAGACAUA
		_______\|\|__\|\|\|___\|\|__\|\|\|\|\|\|\|\|
		_______CU__ACC___UC__GUCUGUAU
(miRNA)	3'	______A_______AG_____________	5'

UTR3

6mer

4075-4094

0.00199514042777359

Position on chromosome:

17:42879891-42879910

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	AUGUACCUC____GUAAU__A________	3'
		_________AUGG_____UA_UAGACAUG
		_________\|\|\|\|_____.\|_.\|\|\|\|\|\|.
		_________UACC_____GU_GUCUGUAU
(miRNA)	3'	________C____A______C________	5'

UTR3

6mer

3776-3797

0.00173531395926744

Position on chromosome:

17:42879592-42879613

Conserved species:

panTro2,rheMac2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AAUGCC___AAGAAC____GCAA______U	3'
		______AGG_______CAG____AGACAU_
		______\|\|\|_______\|\|\|____\|\|\|\|\|\|_
		______UCC_______GUC____UCUGUA_
(miRNA)	3'	_____U___ACUACCA___G_________U	5'

UTR3

6mer

3481-3502

0.0021549660263551

Position on chromosome:

17:42879297-42879318

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UGCCAAA____UUCUCCCCUAAU______	3'
		_______GUCA____________GACAUA
		_______\|\|\|\|____________\|\|\|\|\|\|
		_______CAGU____________CUGUAU
(miRNA)	3'	______C____CGU_______________	5'

UTR3

6mer

2985-3005

0.00215998991355771

Position on chromosome:

17:42878801-42878821

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UACUGUUU___AU__CCA__UA_______	3'
		________UGA__UG___UA__AGACAUG
		________\|\|\|__\|\|___.\|__\|\|\|\|\|\|.
		________ACU__AC___GU__UCUGUAU
(miRNA)	3'	_______C_______CA___CG_______	5'

UTR3

7mer

2242-2262

0.00526333255423344

Position on chromosome:

17:42878058-42878078

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUGCUUU____CUCUUUA___________C	3'
		_______GGUG_______UCA_CAGACAU_
		_______\|\|\|\|_______\|\|\|_\|\|\|\|\|\|\|_
		_______CCAC_______AGU_GUCUGUA_
(miRNA)	3'	______U____UACC______C_______U	5'

UTR3

6mer

2030-2050

0.00129498141671879

Position on chromosome:

17:42877846-42877866

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUGUAA____CAA____AUGU________	3'
		________AAGG_____GU____UAGACAUG
		________\|\|\|\|_____\|\|____.\|\|\|\|\|\|.
		________UUCC_____CA____GUCUGUAU
(miRNA)	3'	____________ACUAC__GUC_________	5'

UTR3

8mer+wobble

1206-1228

0.00527620785472971

Position on chromosome:

17:42877022-42877044

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCUCCG______C___GAUUA________	3'
		______AAGGUG_UGG_____CAGGCAUA
		______\|\|\|\|\|\|_\|\|\|_____\|\|\|.\|\|\|\|
		______UUCCAC_ACC_____GUCUGUAU
(miRNA)	3'	____________U___AGUC_________	5'

ENSG00000167232 (ZNF91)

hsa-miR-654-3p

0.968527842505303

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1364-1388

0.0308031473873247

Position on chromosome:

19:23541862-23541886

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUC____CC____CCCUAAC________	3'
		____UGGU__UCAG_______CAGACAUA
		____\|\|.\|__\|\|\|\|_______\|\|\|\|\|\|\|\|
		____ACUA__AGUC_______GUCUGUAU
(miRNA)	3'	___C____CC___________________	5'

UTR3

8mer

1196-1220

0.0381467692067679

Position on chromosome:

19:23541694-23541718

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAAA___UCC___AUUC___A________	3'
		____AAG___UGA____UUA_CAGACAUA
		____\|\|\|___\|\|\|____\|.\|_\|\|\|\|\|\|\|\|
		____UUC___ACU____AGU_GUCUGUAU
(miRNA)	3'	_______C_____ACC____C________	5'

UTR3

8mer

3059-3066

0.0239170909395051

Position on chromosome:

19:23545264-23545271

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUAUAAAUUUUUAAAUUCAAA________	3'
		_____________________CAGACAUA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

UTR3

7mer

3047-3066

0.00684547216634248

Position on chromosome:

19:23545252-23545271

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAAUUCAAA___ACAUACGAUA_______	3'
		_________CAG__________AGACAUA
		_________\|\|\|__________\|\|\|\|\|\|\|
		_________GUC__________UCUGUAU
(miRNA)	3'	________A___G________________	5'

UTR3

7mer

2723-2748

0.00921082548602827

Position on chromosome:

19:23544928-23544953

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCU______CU_AACCCUAACU_______	3'
		___AUGGUC__C__________AGACAUA
		___\|\|\|\|\|\|__\|__________\|\|\|\|\|\|\|
		___UACCAG__G__________UCUGUAU
(miRNA)	3'	__C______UC__________________	5'

UTR3

7mer

2135-2160

0.00696983915444576

Position on chromosome:

19:23544340-23544365

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAU______UU_AACCCUAACU_______	3'
		___AUGGUC__C__________AGACAUA
		___\|\|\|\|\|\|__\|__________\|\|\|\|\|\|\|
		___UACCAG__G__________UCUGUAU
(miRNA)	3'	__C______UC__________________	5'

UTR3

7mer

1715-1740

0.00620195412517362

Position on chromosome:

19:23543920-23543945

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCU______CUCAACCCUA__A_______	3'
		___AUGGUC__________AG_AGACAUA
		___\|\|\|\|\|\|__________\|\|_\|\|\|\|\|\|\|
		___UACCAG__________UC_UCUGUAU
(miRNA)	3'	__C__________________G_______	5'

UTR3

7mer

1211-1236

0.00738802086989046

Position on chromosome:

19:23543416-23543441

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAU______UU_AACCCUAACU_______	3'
		___AUGGUC__C__________AGACAUA
		___\|\|\|\|\|\|__\|__________\|\|\|\|\|\|\|
		___UACCAG__G__________UCUGUAU
(miRNA)	3'	__C______UC__________________	5'

UTR3

7mer

539-546

0.00928032120055598

Position on chromosome:

19:23542744-23542751

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAGCCAAUCCUCAACCCUAAC________	3'
		_____________________UAGACAUA
		_____________________.\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

UTR3

7mer

287-294

0.0137984033763464

Position on chromosome:

19:23542492-23542499

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAGCCAAUCUUCAACCCUAAC________	3'
		_____________________UAGACAUA
		_____________________.\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

ENSG00000111203 (ITFG2)

hsa-miR-654-3p

0.968244935771511

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

344-367

0.00767931935842842

Position on chromosome:

12:2930445-2930468

Conserved species:

panTro2,rheMac2,mm9,oryCun2,echTel1,monDom5

Binding area:

(Transcript)	5'	GCCC___AC______CUG__C_______C	3'
		____GAG__GUGGUG___CA_CAGACAU_
		____.\|\|__\|\|\|.\|\|___\|\|_\|\|\|\|\|\|\|_
		____UUC__CACUAC___GU_GUCUGUA_
(miRNA)	3'	_______________CA___C_______U	5'

UTR3

8mer

614-629

0.0560171733538901

Position on chromosome:

12:2931994-2932009

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,monDom5,xenTro2

Binding area:

(Transcript)	5'	GUUGCAUGCGCCU________A___________	3'
		_____________GG_GAUGG____CAGACAUA
		_____________\|\|_\|\|\|\|\|____\|\|\|\|\|\|\|\|
		_____________CC_CUACC____GUCUGUAU
(miRNA)	3'	____________U__A_____AGUC________	5'

UTR3

6mer

1330-1354

0.00286363655217883

Position on chromosome:

12:2939678-2939702

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GACA_____AGUUG_ACCG__G_______	3'
		____GAUGG_____C____AG_AGACAUG
		____\|\|\|\|\|_____\|____\|\|_\|\|\|\|\|\|.
		____CUACC_____G____UC_UCUGUAU
(miRNA)	3'	___A_____A___________G_______	5'

ENSG00000167600 (CYP2S1)

hsa-miR-654-3p

0.966705488519021

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

229-249

0.0621637722186979

Position on chromosome:

19:41712623-41712643

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	AACUGCUG______CUUUCCA________	3'
		________GGUUAG_______CAGACAUA
		________\|\|\|.\|\|_______\|\|\|\|\|\|\|\|
		________CCAGUC_______GUCUGUAU
(miRNA)	3'	_______A_____________________	5'

UTR3

6mer

748-769

0.00359662227237714

Position on chromosome:

19:41713142-41713163

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGCGAUU___CA___AGACUUU_______	3'
		_______AUG__CAG_______GGACAUA
		_______\|\|\|__\|\|\|_______.\|\|\|\|\|\|
		_______UAC__GUC_______UCUGUAU
(miRNA)	3'	______C___CA___G_____________	5'

ENSG00000197020 (ZNF100)

hsa-miR-654-3p

0.963074664884202

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3786-3793

0.042209589884749

Position on chromosome:

19:21909354-21909361

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAAUAAAUUCUCAAUUCCUAA________	3'
		_____________________CAGACAUA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

UTR3

6mer

2744-2756

0.00355599222664496

Position on chromosome:

19:21908312-21908324

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUAUAAACUUUGCU___AAAA________U	3'
		_______________AUG______AGACAU_
		_______________\|\|\|______\|\|\|\|\|\|_
		_______________UAC______UCUGUA_
(miRNA)	3'	______________C___CAGUCG______U	5'

UTR3

7mer

2460-2485

0.00523852395749089

Position on chromosome:

19:21908028-21908053

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CA____A_U____UUAUGCCA_______U	3'
		__GUGA_G_GUUA________CAGACAU_
		__\|\|\|\|_\|_\|\|.\|________\|\|\|\|\|\|\|_
		__CACU_C_CAGU________GUCUGUA_
(miRNA)	3'	_C____A______C______________U	5'

UTR3

8mer

1629-1639

0.0082927335363607

Position on chromosome:

19:21907197-21907207

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUGUCUGCCUGCAAACA__U________U	3'
		_________________CA_GCAGACAU_
		_________________\|\|_\|\|\|\|\|\|\|\|_
		_________________GU_CGUCUGUA_
(miRNA)	3'	________________A___________U	5'

UTR3

6mer

1081-1091

0.00188253140135844

Position on chromosome:

19:21906649-21906659

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUUCUUUUCACUUUUUA____U______	3'
		__________________UAGU_GACAUA
		__________________.\|\|._\|\|\|\|\|\|
		__________________GUCG_CUGUAU
(miRNA)	3'	_________________A____U______	5'

UTR3

6mer

845-858

0.0028420557768307

Position on chromosome:

19:21906413-21906426

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAUUGAUUCUUCAU________A_______	3'
		_______________GUGG__AG_GGACAUA
		_______________.\|\|\|__\|\|_.\|\|\|\|\|\|
		_______________UACC__UC_UCUGUAU
(miRNA)	3'	______________C____AG__G_______	5'

UTR3

8mer

1043-1050

0.0320900199293108

Position on chromosome:

19:21910528-21910535

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCAUACAUUUUCAAAUUCAAA________	3'
		_____________________CAGACAUA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GUCUGUAU
(miRNA)	3'	____________________C________	5'

UTR3

7mer

1031-1050

0.00777799136606472

Position on chromosome:

19:21910516-21910535

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAAUUCAAA___ACAUAAGAUA_______	3'
		_________CAG__________AGACAUA
		_________\|\|\|__________\|\|\|\|\|\|\|
		_________GUC__________UCUGUAU
(miRNA)	3'	________A___G________________	5'

ENSG00000136450 (SRSF1)

hsa-miR-654-3p

0.961833372991455

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1677-1697

0.020174390815149

Position on chromosome:

17:56082398-56082418

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGCUUUUC___U___UUUCU_________	3'
		________AUG_GUC_____GUAGACAUA
		________\|\|\|_\|\|\|_____\|.\|\|\|\|\|\|\|
		________UAC_CAG_____CGUCUGUAU
(miRNA)	3'	_______C_______U_____________	5'

UTR3

8mer

723-736

0.0432523451304593

Position on chromosome:

17:56081444-56081457

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GUGCAUCUGUUAAAC_____A____________	3'
		_______________UGAUG_____CAGACAUA
		_______________\|\|\|\|\|_____\|\|\|\|\|\|\|\|
		_______________ACUAC_____GUCUGUAU
(miRNA)	3'	______________C_____CAGUC________	5'

UTR3

7mer

526-546

0.00671192832398519

Position on chromosome:

17:56084419-56084439

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCUACGU____AACUUAC_UC_______C	3'
		_______GGGU_______C__CAGACAU_
		_______.\|\|\|_______\|__\|\|\|\|\|\|\|_
		_______UCCA_______G__GUCUGUA_
(miRNA)	3'	______U____CUACCA__UC_______U	5'

ENSG00000135837 (CEP350)

hsa-miR-654-3p

0.961329770052067

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3459-3481

0.0632229329660802

Position on chromosome:

1:180083756-180083778

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCUUGU___UACU__ACUGU_________	3'
		______GUG____GU_____GCAGACAUG
		______\|\|\|____\|\|_____\|\|\|\|\|\|\|\|.
		______CAC____CA_____CGUCUGUAU
(miRNA)	3'	_____C___UAC___GU____________	5'

ENSG00000102313 (ITIH6)

hsa-miR-654-3p

0.960474567636461

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

826-849

0.00276789510171734

Position on chromosome:

X:54776158-54776181

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUACA_____AUACAAACA___________	3'
		_____AGGGU_________CA_UAGACAUG
		_____\|.\|\|\|_________\|\|_.\|\|\|\|\|\|.
		_____UUCCA_________GU_GUCUGUAU
(miRNA)	3'	__________CUACCA_____C________	5'

UTR3

7mer

816-825

0.00752121858594598

Position on chromosome:

X:54776148-54776157

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUACAAACACAUAGACAUG___________	3'
		___________________CAG_AGACAUA
		___________________\|\|\|_\|\|\|\|\|\|\|
		___________________GUC_UCUGUAU
(miRNA)	3'	__________________A___G_______	5'

UTR3

7mer

136-156

0.0157852318181982

Position on chromosome:

X:54775468-54775488

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGAUAUG_____A___AGGGA_______U	3'
		_______GAUGG_UAG_____CAGACAU_
		_______\|\|\|\|\|_.\|\|_____\|\|\|\|\|\|\|_
		_______CUACC_GUC_____GUCUGUA_
(miRNA)	3'	______A_____A_______________U	5'

UTR3

6mer

97-103

0.00420853604262296

Position on chromosome:

X:54775429-54775435

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACAGGAAUCACAAAACAAACAU_______	3'
		______________________GGACAUA
		______________________.\|\|\|\|\|\|
		______________________UCUGUAU
(miRNA)	3'	_____________________G_______	5'

UTR3

7mer

81-97

0.0249937127652953

Position on chromosome:

X:54775413-54775429

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	AAACAUGGACAU_______A_____________	3'
		____________AGG_GGU___UAG_AGACAUA
		____________\|\|\|_\|.\|___.\|\|_\|\|\|\|\|\|\|
		____________UCC_CUA___GUC_UCUGUAU
(miRNA)	3'	___________U___A___CCA___G_______	5'

UTR3

6mer

37-59

0.00752462168072858

Position on chromosome:

X:54775369-54775391

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	GGAGCC__A____CAGAA____________	3'
		______AG_GUGG_____UCAG_GGACAUA
		______\|\|_\|\|\|._____\|\|\|\|_.\|\|\|\|\|\|
		______UC_CACU_____AGUC_UCUGUAU
(miRNA)	3'	_____U_______ACC______G_______	5'

UTR3

8mer

190-213

0.00802998172158461

Position on chromosome:

X:54776518;54777436-54776539;54777437

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGAU___GCAGUUCCAG__C________C	3'
		____AGG__________CA_GCAGACAU_
		____\|\|\|__________\|\|_\|\|\|\|\|\|\|\|_
		____UCC__________GU_CGUCUGUA_
(miRNA)	3'	___U___ACUACCA______________U	5'

ENSG00000145779 (TNFAIP8)

hsa-miR-654-3p

0.958847762277563

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

121-136

0.0510659932163403

Position on chromosome:

5:118729198-118729213

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	GACUUUACCCAAU____UUGU________	3'
		_____________UCAG____CAGACAUA
		_____________\|\|\|\|____\|\|\|\|\|\|\|\|
		_____________AGUC____GUCUGUAU
(miRNA)	3'	____________C________________	5'

UTR3

6mer

2927-2944

0.00272341090674645

Position on chromosome:

5:118732004-118732021

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GAUCUGUGUA____UU__ACAA______U	3'
		__________GAUG__GU____AGACAU_
		__________\|\|\|\|__\|\|____\|\|\|\|\|\|_
		__________CUAC__CA____UCUGUA_
(miRNA)	3'	_________A________GUCG______U	5'

UTR3

6mer

5610-5619

0.00448833160540361

Position on chromosome:

5:118734687-118734696

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	AAGCAAAUUAUAAAAUAC__UA______U	3'
		__________________UA__AGACAU_
		__________________.\|__\|\|\|\|\|\|_
		__________________GU__UCUGUA_
(miRNA)	3'	_________________A__CG______U	5'

UTR3

6mer

6011-6017

0.00388621649143677

Position on chromosome:

5:118735088-118735094

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUUUUAAAGAUACAAUUUUUAA_______	3'
		______________________AGACAUG
		______________________\|\|\|\|\|\|.
		______________________UCUGUAU
(miRNA)	3'	_____________________G_______	5'

ENSG00000197134 (ZNF257)

hsa-miR-654-3p

0.955240629995882

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

205-217

0.00503438449762505

Position on chromosome:

19:22256333-22256345

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	AAAAGAGCCCUGUAAU___A____________	3'
		________________AUG___AG_AGACAUG
		________________\|\|\|___\|\|_\|\|\|\|\|\|.
		________________UAC___UC_UCUGUAU
(miRNA)	3'	_______________C___CAG__G_______	5'

UTR3

7mer

260-285

0.0127446072121042

Position on chromosome:

19:22270800-22270825

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUG___ACCUU__CC___AGCG_______	3'
		___AAG_____UG__CAG____AGACAUA
		___\|\|\|_____\|\|__\|\|\|____\|\|\|\|\|\|\|
		___UUC_____AC__GUC____UCUGUAU
(miRNA)	3'	______CACU___CA___G__________	5'

UTR3

7mer

490-502

0.0137556358359229

Position on chromosome:

19:22271030-22271042

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUAUAAGUUUUCAAAU____A________	3'
		________________UCAG_UAGACAUA
		________________\|\|\|\|_.\|\|\|\|\|\|\|
		________________AGUC_GUCUGUAU
(miRNA)	3'	_______________C_____________	5'

UTR3

7mer

493-514

0.00772303417549298

Position on chromosome:

19:22271033-22271054

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAUUCA___AGACAUA__AUA_______	3'
		_______GAU_______AG___AGACAUA
		_______\|\|\|_______\|\|___\|\|\|\|\|\|\|
		_______CUA_______UC___UCUGUAU
(miRNA)	3'	______A___CCAG_____G_________	5'

UTR3

6mer

559-586

0.00312918076521127

Position on chromosome:

19:22271099-22271126

Conserved species:

panTro2

Binding area:

(Transcript)	5'	U__C___CUU______ACUAACUC______	3'
		_UG_AUG___UCA_CA________GACAUA
		_\|\|_\|\|\|___\|\|\|_\|\|________\|\|\|\|\|\|
		_AC_UAC___AGU_GU________CUGUAU
(miRNA)	3'	C______C_____C________________	5'

UTR3

6mer

652-670

0.00215959665659695

Position on chromosome:

19:22271192-22271210

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAACCAGUCC_____UCUUACUC______	3'
		__________UCAGC________GACAUA
		__________\|\|\|\|\|________\|\|\|\|\|\|
		__________AGUCG________CUGUAU
(miRNA)	3'	_________C_____U_____________	5'

UTR3

6mer

997-1015

0.00273695858689393

Position on chromosome:

19:22271537-22271555

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAACCAGUCC_____CCUUACUC______	3'
		__________UCAGC________GACAUA
		__________\|\|\|\|\|________\|\|\|\|\|\|
		__________AGUCG________CUGUAU
(miRNA)	3'	_________C_____U_____________	5'

UTR3

6mer

1337-1360

0.00204763255753186

Position on chromosome:

19:22271877-22271900

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAACC____UU__UACCUUAUUC______	3'
		_____GGUC__CA__________GACAUA
		_____\|\|\|\|__\|\|__________\|\|\|\|\|\|
		_____CCAG__GU__________CUGUAU
(miRNA)	3'	____A____UC__________________	5'

UTR3

7mer

2832-2853

0.011398061370708

Position on chromosome:

19:22273372-22273393

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUAGCU____CAC___CA___UU_______U	3'
		______AAGG___UGA____C__CAGACAU_
		______\|\|\|\|___\|\|\|____\|__\|\|\|\|\|\|\|_
		______UUCC___ACU____G__GUCUGUA_
(miRNA)	3'	________________ACCA_UC_______U	5'