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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000121749 (TBC1D15) | hsa-miR-520h | 0.999306135915577 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 11-35 | 0.0400170067369983 | 7 | | | | | | | | | | Position on chromosome: | 12:72316996-72317020 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UCUU_____UUU______AGA________ | 3' | | | ____GCUUU___GGGAAG___CACUUUGU | | | | ____.||.|___||||||___|||||||| | | | | ____UGAGA___CCCUUC___GUGAAACA | | (miRNA) | 3' | _________UUU_________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 287-309 | 0.0520518354721215 | 9 | | | | | | | | | | Position on chromosome: | 12:72317272-72317294 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GUGGA____UU____AUUAU________A | 3' | | | _____UGAG__GGAA_____GCACUUUG_ | | | | _____|.|.__||||_____||||||||_ | | | | _____AUUU__CCUU_____CGUGAAAC_ | | (miRNA) | 3' | ____G____C__________________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 304-326 | 0.0309187854508232 | 6 | | | | | | | | | | Position on chromosome: | 12:72317289-72317311 | Conserved species: | panTro2,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | UUAUGC________AAACAUU________ | 3' | | | ______ACUUUGAA_______CACUUUGU | | | | ______|||.|.||_______|||||||| | | | | ______UGAGAUUU_______GUGAAACA | | (miRNA) | 3' | ______________CCCUUC_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1551-1569 | 0.00166959271728697 | 0 | | | | | | | | | | Position on chromosome: | 12:72318536-72318554 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GGCUCACGC__G___UCCC__________G | 3' | | | _________CU_UAA_____AGCACUUUG_ | | | | _________||_|||_____|||||||||_ | | | | _________GA_AUU_____UCGUGAAAC_ | | (miRNA) | 3' | ________U__G___UCCCU_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2760-2780 | 0.00275534860387805 | 2 | | | | | | | | | | Position on chromosome: | 12:72319745-72319765 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CAGUGCA_____UA___ACCA_______A | 3' | | | _______CUGAA__GAA____UACUUUG_ | | | | _______||.||__|||____.||||||_ | | | | _______GAUUU__CUU____GUGAAAC_ | | (miRNA) | 3' | ______A_____CC___C__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2845-2868 | 0.00215524395468773 | 2 | | | | | | | | | | Position on chromosome: | 12:72319830-72319853 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUAAC______UUAUAAAAU__________ | 3' | | | _____ACUUUA_________AG_GCUUUGU | | | | _____|||.||_________||_.|||||| | | | | _____UGAGAU_________UC_UGAAACA | | (miRNA) | 3' | ___________UUCCCU_____G_______ | 5' |
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| | | | | 2 | ENSG00000104343 (UBE2W) | hsa-miR-520h | 0.997219535815456 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 7824-7843 | 0.0957649950561503 | 13 | | | | | | | | | | Position on chromosome: | 8:74706279-74706298 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UAGUCCUA_____AAAAU__________A | 3' | | | ________CUGAG_____GAGCACUUUG_ | | | | ________||.|._____.|||||||||_ | | | | ________GAUUU_____UUCGUGAAAC_ | | (miRNA) | 3' | _______A_____CCC____________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6608-6621 | 0.00340173459184199 | 5 | | | | | | | | | | Position on chromosome: | 8:74705063-74705076 | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUGUUUUGUUGUUG__________________C | 3' | | | ______________UUGAA___AAG_ACUUUG_ | | | | ______________.|.||___|||_||||||_ | | | | ______________GAUUU___UUC_UGAAAC_ | | (miRNA) | 3' | _____________A_____CCC___G______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6242-6270 | 0.00331894005729334 | 8 | | | | | | | | | | Position on chromosome: | 8:74704697-74704725 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | _____UAU__AU__CAUUUU_UA_______ | 3' | | | _UCUG___AG__GA______G__GCUUUGU | | | | _|||.___||__||______.__.|||||| | | | | _AGAU___UC__CU______U__UGAAACA | | (miRNA) | 3' | G____U____C__________CG_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4098-4117 | 0.00149530387996265 | 1 | | | | | | | | | | Position on chromosome: | 8:74702553-74702572 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | CUGCACCAA____CCCCAAUC_U______ | 3' | | | _________CUGG________C_CUUUGU | | | | _________||..________|_|||||| | | | | _________GAUU________G_GAAACA | | (miRNA) | 3' | ________A____UCCCUUC__U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1955-1982 | 0.00286568772995129 | 5 | | | | | | | | | | Position on chromosome: | 8:74700410-74700437 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | Binding area: | (Transcript) | 5' | ____GUU__UU___U__AGAUU______C | 3' | | | ACUU___AG__GAA_GC_____ACUUUG_ | | | | |||.___||__|||_||_____||||||_ | | | | UGAG___UC__CUU_CG_____UGAAAC_ | | (miRNA) | 3' | ____AUU__C__________________A | 5' |
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| | | | | 3 | ENSG00000070087 (PFN2) | hsa-miR-520h | 0.997060632393889 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 1455-1480 | 0.0131932931778832 | 13 | | | | | | | | | | Position on chromosome: | 3:149684146-149684171 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GAU____UAU_AACCUGUGUCUC______ | 3' | | | ___GGGG___G____________CUUUGU | | | | ___.|||___|____________|||||| | | | | ___UCCC___C____________GAAACA | | (miRNA) | 3' | __U____UU__GU________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1001-1017 | 0.0183652798909484 | 7 | | | | | | | | | | Position on chromosome: | 3:149683692-149683708 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GGGGCAUGCCAA_UU___CAU________ | 3' | | | ____________G__GGG___CACUUUGU | | | | ____________.__|||___|||||||| | | | | ____________U__CCC___GUGAAACA | | (miRNA) | 3' | ___________A_UU___UUC________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 906-933 | 0.0235044676353958 | 12 | | | | | | | | | | Position on chromosome: | 3:149683597-149683624 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | _______UC__U_UCUUUUC_________A | 3' | | | _CUCUGA__AG_G_______AGCACUUUG_ | | | | _||||.|__||_|_______|||||||||_ | | | | _GAGAUU__UC_C_______UCGUGAAAC_ | | (miRNA) | 3' | U__________C_U_______________A | 5' |
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| | | | | | | | | UTR3 | 9mer | 110-128 | 0.0508726753487388 | 13 | | | | | | | | | | Position on chromosome: | 3:149682801-149682819 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUUUGUCCAU____UUCCCU___________ | 3' | | | __________UUCU________GCACUUUGU | | | | __________.|||________||||||||| | | | | __________GAGA________CGUGAAACA | | (miRNA) | 3' | _________U____UUUCCCUU_________ | 5' |
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| | | | | 4 | ENSG00000006432 (MAP3K9) | hsa-miR-520h | 0.989130830491539 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 7726-7741 | 0.0588458328291195 | 12 | | | | | | | | | | Position on chromosome: | 14:71196969-71196984 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CUACUUCUUGCA____UAAU__________A | 3' | | | ____________CUGA______GCACUUUG_ | | | | ____________||.|______||||||||_ | | | | ____________GAUU______CGUGAAAC_ | | (miRNA) | 3' | ___________A____UCCCUU________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 7470-7489 | 0.00409648287889516 | 5 | | | | | | | | | | Position on chromosome: | 14:71196713-71196732 | Conserved species: | panTro2,rheMac2,rn4,mm9,loxAfr3 | Binding area: | (Transcript) | 5' | UGCGCAGAG___UCAU____UC_________ | 3' | | | _________CUG____AGGG___C_CUUUGU | | | | _________||.____||||___|_|||||| | | | | _________GAU____UCCC___G_GAAACA | | (miRNA) | 3' | ________A___U_______UUC_U______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 6144-6168 | 0.00665473759822909 | 3 | | | | | | | | | | Position on chromosome: | 14:71195387-71195411 | Conserved species: | panTro2,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | CUU______U___CCCAUU_________G | 3' | | | ___GCUUUA_GAG______AGCACUUUG_ | | | | ___.||.||_.||______|||||||||_ | | | | ___UGAGAU_UUC______UCGUGAAAC_ | | (miRNA) | 3' | _____________CCU____________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6049-6068 | 0.00111004541608176 | 3 | | | | | | | | | | Position on chromosome: | 14:71195292-71195311 | Conserved species: | panTro2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUGCUUCUC_____UGUCCUU__U______ | 3' | | | _________UUCUG________C_CUUUGU | | | | _________.|||.________|_|||||| | | | | _________GAGAU________G_GAAACA | | (miRNA) | 3' | ________U_____UUCCCUUC_U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3190-3213 | 0.00153669834792197 | 2 | | | | | | | | | | Position on chromosome: | 14:71192433-71192456 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CUUUA_G______AAU__CUU_________ | 3' | | | _____G_UCUGAG___GA___GU_CUUUGU | | | | _____._|||.|.___||___|._|||||| | | | | _____U_AGAUUU___CU___CG_GAAACA | | (miRNA) | 3' | ______G______CC___U____U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2544-2565 | 0.00200256355378961 | 3 | | | | | | | | | | Position on chromosome: | 14:71191787-71191808 | Conserved species: | panTro2,rheMac2,loxAfr3 | Binding area: | (Transcript) | 5' | GAGCUGA_____UCCACACCU_U______ | 3' | | | _______GCUUU_________C_CUUUGU | | | | _______.||.|_________|_|||||| | | | | _______UGAGA_________G_GAAACA | | (miRNA) | 3' | ____________UUUCCCUUC_U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1777-1799 | 0.00241156291550788 | 5 | | | | | | | | | | Position on chromosome: | 14:71191020-71191042 | Conserved species: | panTro2,rheMac2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AUGAA__A_____________UUUUA______G | 3' | | | _____AC_UCUA____GGAGC_____ACUUUG_ | | | | _____||_||||____|.|||_____||||||_ | | | | _____UG_AGAU____CUUCG_____UGAAAC_ | | (miRNA) | 3' | ____________UUCC________________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 252-258 | 0.00777371743974567 | 2 | | | | | | | | | | Position on chromosome: | 14:71189495-71189501 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GACCCCGUGUCCUUGAAUUCC_______C | 3' | | | _____________________CACUUUG_ | | | | _____________________|||||||_ | | | | _____________________GUGAAAC_ | | (miRNA) | 3' | ____________________C_______A | 5' |
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| | | | | 5 | ENSG00000079387 (SENP1) | hsa-miR-520h | 0.982919506033282 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 3669-3675 | 0.00732708273658386 | 6 | | | | | | | | | | Position on chromosome: | 12:48468357-48468363 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AUGUCUUAGUUCCAGUAAAAA_______A | 3' | | | _____________________UACUUUG_ | | | | _____________________.||||||_ | | | | _____________________GUGAAAC_ | | (miRNA) | 3' | ____________________C_______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2223-2242 | 0.00254229756257483 | 7 | | | | | | | | | | Position on chromosome: | 12:48438904-48438923 | Conserved species: | panTro2,rheMac2,mm9,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | CAGAUACU_____UGC____AA__________G | 3' | | | ________AUUUU___AAAG______ACUUUG_ | | | | ________|.|.|___||||______||||||_ | | | | ________UGAGA___UUUC______UGAAAC_ | | (miRNA) | 3' | ____________________CCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1897-1914 | 0.00156874757326504 | 5 | | | | | | | | | | Position on chromosome: | 12:48438578-48438595 | Conserved species: | panTro2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | CAGGAAUGUG___G____CU____G______G | 3' | | | __________ACU_UAAA_____G_ACUUUG_ | | | | __________|||_||||_____|_||||||_ | | | | __________UGA_AUUU_____C_UGAAAC_ | | (miRNA) | 3' | _____________G____CCCUU_G______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1283-1305 | 0.0015899188727671 | 5 | | | | | | | | | | Position on chromosome: | 12:48437964-48437986 | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,echTel1 | Binding area: | (Transcript) | 5' | AAUAU________CCU___UGA______C | 3' | | | _____UUUUGAGG___GGA___ACUUUG_ | | | | _____.|.|.|.|___|||___||||||_ | | | | _____GAGAUUUC___CCU___UGAAAC_ | | (miRNA) | 3' | ____U______________UCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 706-723 | 0.00493286796700985 | 2 | | | | | | | | | | Position on chromosome: | 12:48437387-48437404 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UCUCUUUAUUU____UUCUUUUU_________ | 3' | | | ___________UUCU___________CUUUGU | | | | ___________.|||___________|||||| | | | | ___________GAGA___________GAAACA | | (miRNA) | 3' | __________U____UUUCCCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 396-415 | 0.00924776026387478 | 8 | | | | | | | | | | Position on chromosome: | 12:48437077-48437096 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | AUCUGUCUU_____UCCUCAC__________ | 3' | | | _________AC_CU_______AG_ACUUUGU | | | | _________||_||_______||_||||||| | | | | _________UG_GA_______UC_UGAAACA | | (miRNA) | 3' | ___________A__UUUCCCU__G_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 327-336 | 0.043362325141993 | 8 | | | | | | | | | | Position on chromosome: | 12:48437008-48437017 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | AAAUGAAACAUGCAACAA__________A | 3' | | | __________________AAGCACUUUG_ | | | | __________________||||||||||_ | | | | __________________UUCGUGAAAC_ | | (miRNA) | 3' | _________________C__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 124-144 | 0.00637010743386404 | 2 | | | | | | | | | | Position on chromosome: | 12:48436805-48436825 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GAGUAGUA___________A_UUUCCC______ | 3' | | | ________UCU____GGAA_C______CUUUGU | | | | ________|||____||||_|______|||||| | | | | ________AGA____CCUU_G______GAAACA | | (miRNA) | 3' | _______G___UUUC____C_U___________ | 5' |
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| | | | | 6 | ENSG00000107864 (CPEB3) | hsa-miR-520h | 0.981954528302155 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 5290-5304 | 0.0577672018638076 | 12 | | | | | | | | | | Position on chromosome: | 10:93811739-93811753 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GUGUAGAAUGGUA____UUU___________A | 3' | | | _____________CUGA______GCACUUUG_ | | | | _____________||.|______||||||||_ | | | | _____________GAUU______CGUGAAAC_ | | (miRNA) | 3' | ____________A____UCCCUU________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2110-2132 | 0.00461651620500598 | 14 | | | | | | | | | | Position on chromosome: | 10:93808559-93808581 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | UCAGUU_____U_________UAAAAC______ | 3' | | | ______AUUUU_____GAAGC______CUUUGU | | | | ______|.|.|_____|||||______|||||| | | | | ______UGAGA_____CUUCG______GAAACA | | (miRNA) | 3' | ___________UUUCC_____U___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 58-83 | 0.0136431105944921 | 9 | | | | | | | | | | Position on chromosome: | 10:93806507-93806532 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,galGal3 | Binding area: | (Transcript) | 5' | GCU___G__UACAACU___UUAA_______ | 3' | | | ___ACU_CU________GC____ACUUUGU | | | | ___|||_||________||____||||||| | | | | ___UGA_GA________CG____UGAAACA | | (miRNA) | 3' | _________UUUCCCUU_____________ | 5' |
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| | | | | 7 | ENSG00000124762 (CDKN1A) | hsa-miR-520h | 0.981775122199604 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 457-474 | 0.0254832462671797 | 8 | | | | | | | | | | Position on chromosome: | 6:36654035-36654052 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,monDom5 | Binding area: | (Transcript) | 5' | AUUUGAGAAG____CA__U_________A | 3' | | | __________UAAA__GA_GGCACUUUG_ | | | | __________||||__||_.||||||||_ | | | | __________AUUU__CU_UCGUGAAAC_ | | (miRNA) | 3' | _________G____CC____________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 488-513 | 0.00454952513304145 | 6 | | | | | | | | | | Position on chromosome: | 6:36654066-36654091 | Conserved species: | panTro2,rheMac2,mm9,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | CC___U______AUCAUCAAAA______G | 3' | | | __GAG_GGGGGC__________ACUUUG_ | | | | __.||_||..||__________||||||_ | | | | __UUC_CCUUCG__________UGAAAC_ | | (miRNA) | 3' | _U__________________________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 1133-1154 | 0.0458293835547207 | 8 | | | | | | | | | | Position on chromosome: | 6:36654711-36654732 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CCAUCC___CCC__UUCAUU________A | 3' | | | ______CUC___AG______GCACUUUG_ | | | | ______|||___||______||||||||_ | | | | ______GAG___UC______CGUGAAAC_ | | (miRNA) | 3' | _____U___AUU__CCUU__________A | 5' |
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| | | | | 8 | ENSG00000107897 (ACBD5) | hsa-miR-520h | 0.979167703557359 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1680-1704 | 0.00966031201305116 | 3 | | | | | | | | | | Position on chromosome: | 10:27485826-27485850 | Conserved species: | panTro2,rheMac2,loxAfr3 | Binding area: | (Transcript) | 5' | CACA_____AAUGGUCAUAUU________ | 3' | | | ____GGAAG____________CACUUUGU | | | | ____|||||____________|||||||| | | | | ____CCUUC____________GUGAAACA | | (miRNA) | 3' | ___C_________________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1444-1460 | 0.00641835287897299 | 6 | | | | | | | | | | Position on chromosome: | 10:27485590-27485606 | Conserved species: | panTro2,rheMac2,mm9,bosTau4,canFam2,echTel1 | Binding area: | (Transcript) | 5' | UAUUCAAUCAUA____U_U_UU________ | 3' | | | ____________UAAA_G_A__C_CUUUGU | | | | ____________||||_|_|__|_|||||| | | | | ____________AUUU_C_U__G_GAAACA | | (miRNA) | 3' | ___________G____C_C_UC_U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1003-1020 | 0.00315082294322689 | 1 | | | | | | | | | | Position on chromosome: | 10:27485149-27485166 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUUGAAGAUUU______U________GU______ | 3' | | | ___________CUUUGA______GCA__CUUUGU | | | | ___________||.|.|______|||__|||||| | | | | ___________GAGAUU______CGU__GAAACA | | (miRNA) | 3' | __________U______UCCCUU___________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 588-613 | 0.00326180087438849 | 3 | | | | | | | | | | Position on chromosome: | 10:27484734-27484759 | Conserved species: | panTro2,rheMac2,bosTau4 | Binding area: | (Transcript) | 5' | UGU______UAUAC__AAU___U______ | 3' | | | ___CUUUAG_____AG___GGU_CUUUGU | | | | ___||.||._____||___.|._|||||| | | | | ___GAGAUU_____UC___UCG_GAAACA | | (miRNA) | 3' | __U_____________CCU___U______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 166-181 | 0.041366292311695 | 7 | | | | | | | | | | Position on chromosome: | 10:27484312-27484327 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | CUUAUUUUAUAG___________________C | 3' | | | ____________UUUGAA___AAGCACUUUG_ | | | | ____________|.|.||___||||||||||_ | | | | ____________AGAUUU___UUCGUGAAAC_ | | (miRNA) | 3' | ___________G______CCC__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 105-131 | 0.00977564689330714 | 7 | | | | | | | | | | Position on chromosome: | 10:27484251-27484277 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,monDom5 | Binding area: | (Transcript) | 5' | AA___U___AUAU___GUUCCU_______ | 3' | | | __UUA_AGG____AGU______GCUUUGU | | | | __.||_|||____||.______.|||||| | | | | __GAU_UCC____UCG______UGAAACA | | (miRNA) | 3' | _A___U___CU__________________ | 5' |
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| | | | | 9 | ENSG00000134318 (ROCK2) | hsa-miR-520h | 0.975560555114558 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2844-2869 | 0.0058561796132103 | 9 | | | | | | | | | | Position on chromosome: | 2:11322731-11322756 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | CCA_____U____AUGUAAACUA_______ | 3' | | | ___GCUCU__AGG__________GCUUUGU | | | | ___.||||__|||__________.|||||| | | | | ___UGAGA__UCC__________UGAAACA | | (miRNA) | 3' | ________UU___CUUCG____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2131-2149 | 0.00324693559155084 | 2 | | | | | | | | | | Position on chromosome: | 2:11322018-11322036 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GGCUUACGC__G___UCCU__________G | 3' | | | _________CU_UAA_____AGCACUUUG_ | | | | _________||_|||_____|||||||||_ | | | | _________GA_AUU_____UCGUGAAAC_ | | (miRNA) | 3' | ________U__G___UCCCU_________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 279-288 | 0.0618597626743677 | 11 | | | | | | | | | | Position on chromosome: | 2:11320166-11320175 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UGUGAAGACACCAUUUGU__________A | 3' | | | __________________AAGCACUUUG_ | | | | __________________||||||||||_ | | | | __________________UUCGUGAAAC_ | | (miRNA) | 3' | _________________C__________A | 5' |
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| | | | | 10 | ENSG00000152291 (TGOLN2) | hsa-miR-520h | 0.972775118520041 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 4476-4501 | 0.0617299533970426 | 11 | | | | | | | | | | Position on chromosome: | 2:85549623-85549648 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CU___________CUUUGCACCU________G | 3' | | | __GCUUU___GGG__________GCACUUUG_ | | | | __.||.|___|||__________||||||||_ | | | | __UGAGA___CCC__________CGUGAAAC_ | | (miRNA) | 3' | _______UUU___UU________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4203-4225 | 0.00155265257288447 | 0 | | | | | | | | | | Position on chromosome: | 2:85549350-85549372 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UGCUU_____CU____CCUCU_______G | 3' | | | _____UUCUA__AAGG_____UACUUUG_ | | | | _____.||||__||||_____.||||||_ | | | | _____GAGAU__UUCC_____GUGAAAC_ | | (miRNA) | 3' | ____U___________CUUC________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4138-4155 | 0.00223091782067392 | 1 | | | | | | | | | | Position on chromosome: | 2:85549285-85549302 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AAAUGCCAAU___CAAA____U______A | 3' | | | __________GGG____GAGC_ACUUUG_ | | | | __________|||____.|||_||||||_ | | | | __________CCC____UUCG_UGAAAC_ | | (miRNA) | 3' | _________U__________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3191-3217 | 0.00170991010165915 | 2 | | | | | | | | | | Position on chromosome: | 2:85548338-85548364 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | A____U_C_UU__UCUUAUAA_______C | 3' | | | _CUGA_G_G__AG________UACUUUG_ | | | | _||.|_|_|__||________.||||||_ | | | | _GAUU_C_C__UC________GUGAAAC_ | | (miRNA) | 3' | A____U___CU_________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2626-2654 | 0.00192866189651203 | 2 | | | | | | | | | | Position on chromosome: | 2:85547773-85547801 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | _________U__GUGAUUCCCA__________ | 3' | | | _CUC_GGAG_GA__________AGU_CUUUGU | | | | _|||_..||_||__________||._|||||| | | | | _GAG_UUUC_CU__________UCG_GAAACA | | (miRNA) | 3' | U___A____C_______________U______ | 5' |
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| | | | | 11 | ENSG00000047365 (ARAP2) | hsa-miR-520h | 0.970044815144056 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1515-1537 | 0.0675441490125526 | 10 | | | | | | | | | | Position on chromosome: | 4:36069135-36069157 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AACUA____UAACAUAUUUU________A | 3' | | | _____UCUG___________GCACUUUG_ | | | | _____|||.___________||||||||_ | | | | _____AGAU___________CGUGAAAC_ | | (miRNA) | 3' | ____G____UUCCCUU____________A | 5' |
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| | | | | 12 | ENSG00000126804 (ZBTB1) | hsa-miR-520h | 0.969077599299835 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 160-179 | 0.0246762789132987 | 8 | | | | | | | | | | Position on chromosome: | 14:64998776-64998795 | Conserved species: | panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CCAAGAAA____AG_____AU__________G | 3' | | | ________ACUC__UAAAG_____CACUUUG_ | | | | ________||||__|||||_____|||||||_ | | | | ________UGAG__AUUUC_____GUGAAAC_ | | (miRNA) | 3' | ___________________CCUUC_______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 174-191 | 0.038028832514351 | 6 | | | | | | | | | | Position on chromosome: | 14:64998790-64998807 | Conserved species: | panTro2,rheMac2,mm9,bosTau4,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CAGUAAAGAUC_____________U________ | 3' | | | ___________ACUUU____GGAA_CACUUUGU | | | | ___________|||.|____||||_|||||||| | | | | ___________UGAGA____CCUU_GUGAAACA | | (miRNA) | 3' | ________________UUUC____C________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 926-952 | 0.0043033479966624 | 2 | | | | | | | | | | Position on chromosome: | 14:64999542-64999568 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AG_______UCU__CUAUAAAU_______ | 3' | | | __AUUUUAG___GG________GCUUUGU | | | | __|.|.||.___||________.|||||| | | | | __UGAGAUU___CC________UGAAACA | | (miRNA) | 3' | _________U____CUUCG__________ | 5' |
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| | | | | 13 | ENSG00000102780 (DGKH) | hsa-miR-520h | 0.967085400930787 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 778-798 | 0.00578187564153593 | 2 | | | | | | | | | | Position on chromosome: | 13:42804066-42804086 | Conserved species: | rheMac2,oryCun2 | Binding area: | (Transcript) | 5' | GCGUAAAU______UACCU___________ | 3' | | | ________AUUCUG_____AAG_ACUUUGU | | | | ________|.|||._____|||_||||||| | | | | ________UGAGAU_____UUC_UGAAACA | | (miRNA) | 3' | ______________UUCCC___G_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2804-2818 | 0.00179508987357404 | 2 | | | | | | | | | | Position on chromosome: | 13:42806092-42806106 | Conserved species: | panTro2,oryCun2 | Binding area: | (Transcript) | 5' | AUGAGAGCAAUUUU_____UAU_____________ | 3' | | | ______________CUCUG_________GCUUUGU | | | | ______________||||._________.|||||| | | | | ______________GAGAU_________UGAAACA | | (miRNA) | 3' | _____________U_____UUCCCUUCG_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 6886-6892 | 0.00379159759631041 | 10 | | | | | | | | | | Position on chromosome: | 13:42810174-42810180 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AUAUUUAAUAACAAAUAUAAAA_______ | 3' | | | ______________________GCUUUGU | | | | ______________________.|||||| | | | | ______________________UGAAACA | | (miRNA) | 3' | _____________________G_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 7224-7248 | 0.0107475206720485 | 1 | | | | | | | | | | Position on chromosome: | 13:42810512-42810536 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGAU__C___AUAGUAAU__A________ | 3' | | | ____AG_GGA________AG_CACUUUGU | | | | ____||_|||________||_|||||||| | | | | ____UC_CCU________UC_GUGAAACA | | (miRNA) | 3' | ___U_________________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 7506-7532 | 0.0052191342863263 | 2 | | | | | | | | | | Position on chromosome: | 13:42810794-42810820 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | U__________CCUGUAAUCCC_________G | 3' | | | _GCUC___AGG___________AGCACUUUG_ | | | | _.|||___|||___________|||||||||_ | | | | _UGAG___UCC___________UCGUGAAAC_ | | (miRNA) | 3' | _____AUU___CU__________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 8870-8886 | 0.00209109655484513 | 5 | | | | | | | | | | Position on chromosome: | 13:42812158-42812174 | Conserved species: | panTro2,oryCun2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | GGUUUAUCCAG_____UAACU__________G | 3' | | | ___________UUCUG_______G_ACUUUG_ | | | | ___________.|||._______|_||||||_ | | | | ___________GAGAU_______C_UGAAAC_ | | (miRNA) | 3' | __________U_____UUCCCUU_G______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 10942-10957 | 0.00166239357485523 | 1 | | | | | | | | | | Position on chromosome: | 13:42814230-42814245 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUCCACUGAACUU____CUCCC____________ | 3' | | | _____________CUCU_________C_CUUUGU | | | | _____________||||_________|_|||||| | | | | _____________GAGA_________G_GAAACA | | (miRNA) | 3' | ____________U____UUUCCCUUC_U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 10968-10992 | 0.00106013175760058 | 3 | | | | | | | | | | Position on chromosome: | 13:42814256-42814280 | Conserved species: | panTro2,rheMac2,rn4 | Binding area: | (Transcript) | 5' | GUG_____CUACACAUAAU__G______A | 3' | | | ___UCUAG___________AG_ACUUUG_ | | | | ___||||.___________||_||||||_ | | | | ___AGAUU___________UC_UGAAAC_ | | (miRNA) | 3' | __G_____UCCCU________G______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 11705-11723 | 0.00290184994596209 | 2 | | | | | | | | | | Position on chromosome: | 13:42814993-42815011 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GGCUGACAC__G___UCCC__________G | 3' | | | _________CU_UAA_____AGCACUUUG_ | | | | _________||_|||_____|||||||||_ | | | | _________GA_AUU_____UCGUGAAAC_ | | (miRNA) | 3' | ________U__G___UCCCU_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 12901-12929 | 0.00429898677323695 | 3 | | | | | | | | | | Position on chromosome: | 13:42816189-42816217 | Conserved species: | panTro2,rheMac2,loxAfr3 | Binding area: | (Transcript) | 5' | ____U___U_U__UAC___UUUACU______ | 3' | | | _UCU__AG_G_GA___AGC______CUUUGU | | | | _|||__||_|_||___|||______|||||| | | | | _AGA__UC_C_CU___UCG______GAAACA | | (miRNA) | 3' | G___UU_____________U___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 12921-12939 | 0.00495039776611044 | 2 | | | | | | | | | | Position on chromosome: | 13:42816209-42816227 | Conserved species: | panTro2,rn4 | Binding area: | (Transcript) | 5' | AUACAGCUUU_____UUGUUU___________ | 3' | | | __________ACUCU________G_ACUUUGU | | | | __________|||||________|_||||||| | | | | __________UGAGA________C_UGAAACA | | (miRNA) | 3' | _______________UUUCCCUU_G_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 13310-13325 | 0.0075347066042899 | 9 | | | | | | | | | | Position on chromosome: | 13:42816598-42816613 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,echTel1,xenTro2 | Binding area: | (Transcript) | 5' | ACCUGACAGAGC_____UU_UA______G | 3' | | | ____________AGAGG__A__ACUUUG_ | | | | ____________|.|||__|__||||||_ | | | | ____________UUUCC__U__UGAAAC_ | | (miRNA) | 3' | ___________A_____CU_CG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 13501-13516 | 0.0141196027739304 | 12 | | | | | | | | | | Position on chromosome: | 13:42816789-42816804 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CCUUGUACAGAUA_______U______________ | 3' | | | _____________AUUUUGG_GG______CUUUGU | | | | _____________|.|.|.._||______|||||| | | | | _____________UGAGAUU_CC______GAAACA | | (miRNA) | 3' | ____________________U__CUUCGU______ | 5' |
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| | | | | 14 | ENSG00000162624 (LHX8) | hsa-miR-520h | 0.965843331319494 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 99-125 | 0.014083968034178 | 5 | | | | | | | | | | Position on chromosome: | 1:75626680-75626706 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | C_________CAUUUCCAACAU_______C | 3' | | | _AC_CUAAAG____________CACUUUG_ | | | | _||_||||||____________|||||||_ | | | | _UG_GAUUUC____________GUGAAAC_ | | (miRNA) | 3' | ___A______CCUUC______________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 283-298 | 0.0429763580230187 | 11 | | | | | | | | | | Position on chromosome: | 1:75626864-75626879 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUUUAUUUGUCA__A________________C | 3' | | | ____________UC_AAAG___AGCACUUUG_ | | | | ____________||_||||___|||||||||_ | | | | ____________AG_UUUC___UCGUGAAAC_ | | (miRNA) | 3' | ___________G__A____CCU_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 422-434 | 0.0082676479052233 | 7 | | | | | | | | | | Position on chromosome: | 1:75627003-75627015 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUUUUGUUAUAUACA_____________________A | 3' | | | _______________ACUUUA________UACUUUG_ | | | | _______________|||.||________.||||||_ | | | | _______________UGAGAU________GUGAAAC_ | | (miRNA) | 3' | _____________________UUCCCUUC_______A | 5' |
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| | | | | 15 | ENSG00000153207 (AHCTF1) | hsa-miR-520h | 0.964747653939788 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1272-1293 | 0.0532560982895337 | 9 | | | | | | | | | | Position on chromosome: | 1:247003672-247003693 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | GUUACU______UAAUUUAU________A | 3' | | | ______AUUUUA________GCACUUUG_ | | | | ______|.|.||________||||||||_ | | | | ______UGAGAU________CGUGAAAC_ | | (miRNA) | 3' | ____________UUCCCUU_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1172-1200 | 0.0057247256027073 | 7 | | | | | | | | | | Position on chromosome: | 1:247003572-247003600 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ____U____CAUGUCAUUUU__CAU______ | 3' | | | _UUA__GGG___________GC___CUUUGU | | | | _.||__|||___________||___|||||| | | | | _GAU__CCC___________CG___GAAACA | | (miRNA) | 3' | A___UU___UU___________U________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 385-390 | 0.00593115104001759 | 3 | | | | | | | | | | Position on chromosome: | 1:247002785-247002790 | Conserved species: | panTro2,rheMac2,loxAfr3 | Binding area: | (Transcript) | 5' | UGCCUUGUUGAAAAUUUCACUG______A | 3' | | | ______________________ACUUUG_ | | | | ______________________||||||_ | | | | ______________________UGAAAC_ | | (miRNA) | 3' | _____________________G______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 6061-6084 | 0.0231171868446762 | 0 | | | | | | | | | | Position on chromosome: | 1:247070877-247070900 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GUUU______U__CUAUCU_________G | 3' | | | ____UUCUGA_GG______AGCACUUUG_ | | | | ____.|||.|_||______|||||||||_ | | | | ____GAGAUU_CC______UCGUGAAAC_ | | (miRNA) | 3' | ___U______U__CU_____________A | 5' |
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| | | | | 16 | ENSG00000122644 (ARL4A) | hsa-miR-520h | 0.964205405878075 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 94-118 | 0.0116853285283332 | 8 | | | | | | | | | | Position on chromosome: | 7:12728577-12728601 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,echTel1 | Binding area: | (Transcript) | 5' | UGCC___CU______U__UAUUAAA_______ | 3' | | | ____CUC_____GGA_GC_______GCUUUGU | | | | ____|||_____|||_||_______.|||||| | | | | ____GAG_____CCU_CG_______UGAAACA | | (miRNA) | 3' | ___U___AUUUC___U________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 380-389 | 0.0104410589808743 | 8 | | | | | | | | | | Position on chromosome: | 7:12728863-12728872 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,echTel1 | Binding area: | (Transcript) | 5' | UUGCAAGAAAAUUGCAUAC___________ | 3' | | | ___________________AAG_GCUUUGU | | | | ___________________|||_.|||||| | | | | ___________________UUC_UGAAACA | | (miRNA) | 3' | __________________C___G_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1388-1403 | 0.0245806153805224 | 7 | | | | | | | | | | Position on chromosome: | 7:12729871-12729886 | Conserved species: | panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | GAAAAAUCACCA____AAAU________C | 3' | | | ____________AAAG____GCACUUUG_ | | | | ____________||||____||||||||_ | | | | ____________UUUC____CGUGAAAC_ | | (miRNA) | 3' | ___________A____CCUU________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1620-1643 | 0.00497615044639235 | 1 | | | | | | | | | | Position on chromosome: | 7:12730103-12730126 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GGCA_______A__AC___AUUUG______A | 3' | | | ____CU__AGG_GA__AGU_____ACUUUG_ | | | | ____||__|||_||__||._____||||||_ | | | | ____GA__UCC_CU__UCG_____UGAAAC_ | | (miRNA) | 3' | ___A__UU______________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1954-1974 | 0.00621364764139394 | 4 | | | | | | | | | | Position on chromosome: | 7:12730437-12730457 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2 | Binding area: | (Transcript) | 5' | UUUCAAAA____GU___U_UU_ACC______ | 3' | | | ________GCUU____G_G__G___CUUUGU | | | | ________.||.____|_|__|___|||||| | | | | ________UGAG____C_C__C___GAAACA | | (miRNA) | 3' | ____________AUUU_C_UU_GU_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2051-2067 | 0.00663789769767801 | 1 | | | | | | | | | | Position on chromosome: | 7:12730534-12730550 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AAAUGGUAUGA__A___UACAA__________A | 3' | | | ___________AC_CUG_________ACUUUG_ | | | | ___________||_||._________||||||_ | | | | ___________UG_GAU_________UGAAAC_ | | (miRNA) | 3' | _____________A___UUCCCUUCG______A | 5' |
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| | | | | 17 | ENSG00000215504 (AP000974.1) | hsa-miR-520h | 0.961650141241391 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 202-225 | 0.0633643475221531 | 1 | | | | | | | | | | Position on chromosome: | 11:85563802-85563825 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GGGC_____CUGCAAUCUU_________G | 3' | | | ____AGAGG__________GGCACUUUG_ | | | | ____|.|||__________.||||||||_ | | | | ____UUUCC__________UCGUGAAAC_ | | (miRNA) | 3' | ___A_____CU_________________A | 5' |
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| | | | | 18 | ENSG00000010292 (NCAPD2) | hsa-miR-520h | 0.961190634346027 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 440-448 | 0.0419141413654021 | 11 | | | | | | | | | | Position on chromosome: | 12:6623660-6623668 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | AAGAUCAUCCAGAUGCUGC_________A | 3' | | | ___________________AGCACUUUG_ | | | | ___________________|||||||||_ | | | | ___________________UCGUGAAAC_ | | (miRNA) | 3' | __________________U_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 824-833 | 0.0038566934154527 | 7 | | | | | | | | | | Position on chromosome: | 12:6626136-6626145 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | GCCCAUGGCCAUGAUGUCA______________________ | 3' | | | ___________________ACUC____________CUUUGU | | | | ___________________||||____________|||||| | | | | ___________________UGAG____________GAAACA | | (miRNA) | 3' | _______________________AUUUCCCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1656-1676 | 0.00356567981427109 | 11 | | | | | | | | | | Position on chromosome: | 12:6632001-6632021 | Conserved species: | panTro2,rheMac2,rn4,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GUGGUGCA_____U__UUGAAUU______ | 3' | | | ________GGAGG_GA_______CUUUGU | | | | ________..|||_||_______|||||| | | | | ________UUUCC_CU_______GAAACA | | (miRNA) | 3' | _______A________UCGU_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2239-2267 | 0.00193893600153996 | 6 | | | | | | | | | | Position on chromosome: | 12:6635516;6635614-6635537;6635620 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,echTel1 | Binding area: | (Transcript) | 5' | ____C______A__GUCACAAAAGG______ | 3' | | | _CUG__GGGAG_CA___________CUUUGU | | | | _||.__||||._||___________|||||| | | | | _GAU__CCCUU_GU___________GAAACA | | (miRNA) | 3' | A___UU_____C___________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3681-3707 | 0.0117669247671265 | 10 | | | | | | | | | | Position on chromosome: | 12:6640109-6640135 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GC_____C__CCUC__ACAAUG_______ | 3' | | | __UUCUA_AG____AG______ACUUUGU | | | | __.||||_||____||______||||||| | | | | __GAGAU_UC____UC______UGAAACA | | (miRNA) | 3' | _U_____U__CCU___G____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 163-180 | 0.024428633874638 | 0 | | | | | | | | | | Position on chromosome: | 12:6618919-6618936 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GGGCCCCUGG___UGCUGC_________A | 3' | | | __________CUA______AGCACUUUG_ | | | | __________|||______|||||||||_ | | | | __________GAU______UCGUGAAAC_ | | (miRNA) | 3' | _________A___UUCCCU_________A | 5' |
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| | | | | 19 | ENSG00000108848 (LUC7L3) | hsa-miR-520h | 0.961076213528621 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 29-56 | 0.0359573128213136 | 9 | | | | | | | | | | Position on chromosome: | 17:48828052-48828079 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | ______U___UGUAUUGUUUCU_______A | 3' | | | _AGAGG_AAG____________CACUUUG_ | | | | _|.|||_|||____________|||||||_ | | | | _UUUCC_UUC____________GUGAAAC_ | | (miRNA) | 3' | A_____C______________________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 441-468 | 0.0113734491301658 | 9 | | | | | | | | | | Position on chromosome: | 17:48828464-48828491 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | U_________CACAUGUU___C________ | 3' | | | _UUC_GGAGG________GGA_UACUUUGU | | | | _.||_..|||________|.|_.||||||| | | | | _GAG_UUUCC________CUU_GUGAAACA | | (miRNA) | 3' | U___A________________C________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 478-496 | 0.00502372044307245 | 9 | | | | | | | | | | Position on chromosome: | 17:48828501-48828519 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UUUUAAUUAA___G____UAUUU__________ | 3' | | | __________ACU_CUAG_________CUUUGU | | | | __________|||_|||._________|||||| | | | | __________UGA_GAUU_________GAAACA | | (miRNA) | 3' | __________________UCCCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1845-1856 | 0.00406801925200441 | 9 | | | | | | | | | | Position on chromosome: | 17:48829868-48829879 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AAUUGCAAGUUUUCAA___U_______________A | 3' | | | ________________UCU___GG_____ACUUUG_ | | | | ________________|||___||_____||||||_ | | | | ________________AGA___CC_____UGAAAC_ | | (miRNA) | 3' | _______________G___UUU__CUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2785-2802 | 0.00253190902240673 | 2 | | | | | | | | | | Position on chromosome: | 17:48830808-48830825 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUACUAAAAU____UCCACCAA________A | 3' | | | __________CUCU__________ACUUUG_ | | | | __________||||__________||||||_ | | | | __________GAGA__________UGAAAC_ | | (miRNA) | 3' | _________U____UUUCCCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2994-3013 | 0.00167291232286367 | 6 | | | | | | | | | | Position on chromosome: | 17:48831017-48831036 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ACAAAGAUA____CC____CACU________ | 3' | | | _________GCUC___AGG_____GCUUUGU | | | | _________.|||___|||_____.|||||| | | | | _________UGAG___UCC_____UGAAACA | | (miRNA) | 3' | _____________AUU___CUUCG_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4613-4636 | 0.00248448288299801 | 2 | | | | | | | | | | Position on chromosome: | 17:48832636-48832659 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CAGUU_____UCC___UU____UUU______ | 3' | | | _____AUUCU___AAG____GU___CUUUGU | | | | _____|.|||___|||____|.___|||||| | | | | _____UGAGA___UUC____CG___GAAACA | | (miRNA) | 3' | __________U_____CCUU__U________ | 5' |
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| | | | | 20 | ENSG00000164463 (CREBRF) | hsa-miR-520h | 0.959797893105986 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 584-598 | 0.00848767586392995 | 12 | | | | | | | | | | Position on chromosome: | 5:172561333-172561347 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AAGUAAGAAAAAAA_____UAUU______ | 3' | | | ______________AAGCA____CUUUGU | | | | ______________|||||____|||||| | | | | ______________UUCGU____GAAACA | | (miRNA) | 3' | _____________C_______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1227-1250 | 0.00468321477054388 | 9 | | | | | | | | | | Position on chromosome: | 5:172561976-172561999 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | GCUA____UAAAAU___UUUUG______A | 3' | | | ____UUGA______AGU_____ACUUUG_ | | | | ____.|.|______||._____||||||_ | | | | ____GAUU______UCG_____UGAAAC_ | | (miRNA) | 3' | ___A____UCCCU_______________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1872-1892 | 0.00206456629030651 | 3 | | | | | | | | | | Position on chromosome: | 5:172562621-172562641 | Conserved species: | panTro2,rheMac2,oryCun2 | Binding area: | (Transcript) | 5' | GUAGGAU____UUUUUAAUUA_______A | 3' | | | _______UUCU__________UACUUUG_ | | | | _______.|||__________.||||||_ | | | | _______GAGA__________GUGAAAC_ | | (miRNA) | 3' | ______U____UUUCCCUUC________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 1919-1937 | 0.0013515836176688 | 0 | | | | | | | | | | Position on chromosome: | 5:172562668-172562686 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GUAUAAUUUG____UUUCUUU__________ | 3' | | | __________UUCU_________UACUUUGU | | | | __________.|||_________.||||||| | | | | __________GAGA_________GUGAAACA | | (miRNA) | 3' | _________U____UUUCCCUUC________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2491-2499 | 0.00376846616494262 | 9 | | | | | | | | | | Position on chromosome: | 5:172563240-172563248 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | CUUGCAUUUCAAAAAAAAA__________A | 3' | | | ___________________AAG_ACUUUG_ | | | | ___________________|||_||||||_ | | | | ___________________UUC_UGAAAC_ | | (miRNA) | 3' | __________________C___G______A | 5' |
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| | | | | | | | | UTR3 | 9mer | 2639-2657 | 0.0178850987574375 | 12 | | | | | | | | | | Position on chromosome: | 5:172563388-172563406 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UGUAUGUAUA___U___AA___________ | 3' | | | __________UCU__AG__AAGCACUUUGU | | | | __________|||__||__||||||||||| | | | | __________AGA__UC__UUCGUGAAACA | | (miRNA) | 3' | _________G___UU__CC___________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3169-3191 | 0.00328944692401697 | 8 | | | | | | | | | | Position on chromosome: | 5:172563918-172563940 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CAUUG___C____CAAUUAUAA______A | 3' | | | _____UUC_AAAG_________ACUUUG_ | | | | _____.||_||||_________||||||_ | | | | _____GAG_UUUC_________UGAAAC_ | | (miRNA) | 3' | ____U___A____CCUUCG_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3495-3516 | 0.00453079781806358 | 10 | | | | | | | | | | Position on chromosome: | 5:172564244-172564265 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CCUUCC___UC___CAUCUUUA_______A | 3' | | | ______ACU__CUA_________ACUUUG_ | | | | ______|||__|||_________||||||_ | | | | ______UGA__GAU_________UGAAAC_ | | (miRNA) | 3' | ______________UUCCCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4417-4443 | 0.00446560566453104 | 7 | | | | | | | | | | Position on chromosome: | 5:172565166-172565192 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AU____GU______UUCUUUU___AU______ | 3' | | | __ACUU_____GGA_______GUA__CUUUGU | | | | __|||._____|||_______|.|__|||||| | | | | __UGAG_____CCU_______CGU__GAAACA | | (miRNA) | 3' | ______AUUUC___U_________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5481-5508 | 0.0120354604000188 | 10 | | | | | | | | | | Position on chromosome: | 5:172566230-172566257 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | G____AUC__U_UAU___ACAUC______ | 3' | | | _AUUC___AG_G___GCA_____CUUUGU | | | | _|.||___||_|___|||_____|||||| | | | | _UGAG___UC_C___CGU_____GAAACA | | (miRNA) | 3' | _____AUU__C_UU_______________ | 5' |
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| | | | | 21 | ENSG00000164938 (TP53INP1) | hsa-miR-520h | 0.957515019840653 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2212-2238 | 0.00239424583910052 | 3 | | | | | | | | | | Position on chromosome: | 8:95940412-95940438 | Conserved species: | panTro2,rheMac2,bosTau4 | Binding area: | (Transcript) | 5' | UU___________CU___UUUUUAU_______ | 3' | | | __AC_CU__GGGG__AGU_______GCUUUGU | | | | __||_||__.|||__||._______.|||||| | | | | __UG_GA__UCCC__UCG_______UGAAACA | | (miRNA) | 3' | ____A__UU____U__________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 436-451 | 0.00521478659107428 | 3 | | | | | | | | | | Position on chromosome: | 8:95938636-95938651 | Conserved species: | panTro2,bosTau4,loxAfr3 | Binding area: | (Transcript) | 5' | GUGUUUUUUUUUU_______U_____________ | 3' | | | _____________UUUUAAG_GG_____CUUUGU | | | | _____________.|.|||._||_____|||||| | | | | _____________GAGAUUU_CC_____GAAACA | | (miRNA) | 3' | ____________U_______C__UUCGU______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 133-152 | 0.0462380471936526 | 12 | | | | | | | | | | Position on chromosome: | 8:95938333-95938352 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | UACACAGA_____CAAUAC_________C | 3' | | | ________CUGAA______AGCACUUUG_ | | | | ________||.||______|||||||||_ | | | | ________GAUUU______UCGUGAAAC_ | | (miRNA) | 3' | _______A_____CCCU___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 79-96 | 0.0077732203791432 | 7 | | | | | | | | | | Position on chromosome: | 8:95938279-95938296 | Conserved species: | panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AACAUUGUGUG____CACCU___U______ | 3' | | | ___________UUAA______GU_CUUUGU | | | | ___________.|||______|._|||||| | | | | ___________GAUU______CG_GAAACA | | (miRNA) | 3' | __________A____UCCCUU__U______ | 5' |
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| | | | | 22 | ENSG00000259171 (AL163636.6) | hsa-miR-520h | 0.957449400891859 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 179-199 | 0.00998753372945113 | 2 | | | | | | | | | | Position on chromosome: | 14:21167703-21167723 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GAUGAUGC____AC_____AUG_______ | 3' | | | ________AAAG__GGAAG___ACUUUGU | | | | ________||||__|||||___||||||| | | | | ________UUUC__CCUUC___UGAAACA | | (miRNA) | 3' | _______A___________G_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 425-442 | 0.0460856813397923 | 10 | | | | | | | | | | Position on chromosome: | 14:21167949-21167966 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GGUAACCCAC___U_CCUGU________A | 3' | | | __________AGG_G_____GCACUUUG_ | | | | __________|||_|_____||||||||_ | | | | __________UCC_C_____CGUGAAAC_ | | (miRNA) | 3' | _________U_____UU___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 1085-1111 | 0.00552074073572426 | 1 | | | | | | | | | | Position on chromosome: | 14:21168609-21168635 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | U_____U_UUCUUUUUCCUGAA______A | 3' | | | _GGGAA_U______________ACUUUG_ | | | | _|||||_.______________||||||_ | | | | _CCCUU_G______________UGAAAC_ | | (miRNA) | 3' | U_____C_____________________A | 5' |
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| | | | | 23 | ENSG00000187079 (TEAD1) | hsa-miR-520h | 0.955367935218236 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 493-510 | 0.00966150074448301 | 12 | | | | | | | | | | Position on chromosome: | 11:12959263-12959280 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AAACUAAGAAU_______CUUAU_________ | 3' | | | ___________CUUUAGA________CUUUGU | | | | ___________||.||.|________|||||| | | | | ___________GAGAUUU________GAAACA | | (miRNA) | 3' | __________U_______CCCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2596-2616 | 0.0012450401384886 | 2 | | | | | | | | | | Position on chromosome: | 11:12961366-12961386 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UCCAGUCA__CCAGU___CUU_U______ | 3' | | | ________UC_____GGG___C_CUUUGU | | | | ________||_____|||___|_|||||| | | | | ________AG_____CCC___G_GAAACA | | (miRNA) | 3' | _______G__AUUU____UUC_U______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2687-2711 | 0.00106519414249539 | 2 | | | | | | | | | | Position on chromosome: | 11:12961457-12961481 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CUUC______UAU__C___CUCC______ | 3' | | | ____AUUCUG___GG_AGU____CUUUGU | | | | ____|.|||.___||_||.____|||||| | | | | ____UGAGAU___CC_UCG____GAAACA | | (miRNA) | 3' | __________UUC__U___U_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3029-3052 | 0.00235504906665476 | 5 | | | | | | | | | | Position on chromosome: | 11:12961799-12961822 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UUGAC________CU___UAAUU______ | 3' | | | _____AUUUUGGA__GGG_____CUUUGU | | | | _____|.|.|..|__|||_____|||||| | | | | _____UGAGAUUU__CCC_____GAAACA | | (miRNA) | 3' | __________________UUCGU______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3823-3843 | 0.00185093776580794 | 1 | | | | | | | | | | Position on chromosome: | 11:12962593-12962613 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGAGUUG__________UUCCU_C_______G | 3' | | | _______UCUA___GGA_____G_CACUUUG_ | | | | _______||||___|||_____|_|||||||_ | | | | _______AGAU___CCU_____C_GUGAAAC_ | | (miRNA) | 3' | ______G____UUC___U_____________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6103-6129 | 0.00299584898815237 | 6 | | | | | | | | | | Position on chromosome: | 11:12964873-12964899 | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UU____UUUCAACUGUUACU_________ | 3' | | | __CUCU______________GUGCUUUGU | | | | __||||______________|..|||||| | | | | __GAGA______________CGUGAAACA | | (miRNA) | 3' | _U____UUUCCCUU_______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 6851-6873 | 0.00323209474352585 | 3 | | | | | | | | | | Position on chromosome: | 11:12965621-12965643 | Conserved species: | panTro2,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | AAUGGG_____CAC__UCUGUGU______ | 3' | | | ______AUUCU___GG_______CUUUGU | | | | ______|.|||___||_______|||||| | | | | ______UGAGA___CC_______GAAACA | | (miRNA) | 3' | ___________UUU__CUUCGU_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 7239-7260 | 0.0138591047212977 | 16 | | | | | | | | | | Position on chromosome: | 11:12966009-12966030 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | GCAGAGA_____UUUAUA___________ | 3' | | | _______AUUUU______AAGUGCUUUGU | | | | _______|.|.|______|||..|||||| | | | | _______UGAGA______UUCGUGAAACA | | (miRNA) | 3' | ____________UUUCCC___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 7453-7467 | 0.0245130512882696 | 15 | | | | | | | | | | Position on chromosome: | 11:12966223-12966237 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | GACAUUUUGUAGCU_______A_____________ | 3' | | | ______________UUCUAGA_______ACUUUGU | | | | ______________.||||.|_______||||||| | | | | ______________GAGAUUU_______UGAAACA | | (miRNA) | 3' | _____________U_______CCCUUCG_______ | 5' |
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| | | | | 24 | ENSG00000143995 (MEIS1) | hsa-miR-520h | 0.955049484701285 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 202-227 | 0.0097229551996198 | 10 | | | | | | | | | | Position on chromosome: | 2:66796114-66796139 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GG___UUU__CACUAUCU__UG______C | 3' | | | __UCU___GG________GU__ACUUUG_ | | | | __|||___||________|.__||||||_ | | | | __AGA___CC________CG__UGAAAC_ | | (miRNA) | 3' | _G___UUU__CUU_______________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 360-388 | 0.00838700892093147 | 10 | | | | | | | | | | Position on chromosome: | 2:66796272-66796300 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | __________AGUACAAAUGGGGU______ | 3' | | | _GGGGAAGUA______________CUUUGU | | | | _.||||||.|______________|||||| | | | | _UCCCUUCGU______________GAAACA | | (miRNA) | 3' | U_____________________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 374-399 | 0.0283379377362967 | 12 | | | | | | | | | | Position on chromosome: | 2:66796286-66796311 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UAC___U____UCUUUGUUUU________ | 3' | | | ___AAA_GGGG__________CACUUUGU | | | | ___|||_|||.__________|||||||| | | | | ___UUU_CCCU__________GUGAAACA | | (miRNA) | 3' | __A________UC________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 856-876 | 0.00669437083276884 | 8 | | | | | | | | | | Position on chromosome: | 2:66796768-66796788 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,echTel1,galGal3 | Binding area: | (Transcript) | 5' | AUUUUGA____C__UCAACUAA______A | 3' | | | _______GCUC_AG________ACUUUG_ | | | | _______.|||_|.________||||||_ | | | | _______UGAG_UU________UGAAAC_ | | (miRNA) | 3' | ___________A__UCCCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 884-903 | 0.00379372144456719 | 11 | | | | | | | | | | Position on chromosome: | 2:66796796-66796815 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGAUUUUUU____U___UUUAUUC______ | 3' | | | _________UUCU__AG_______CUUUGU | | | | _________.|||__||_______|||||| | | | | _________GAGA__UC_______GAAACA | | (miRNA) | 3' | ________U____UU__CCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1242-1269 | 0.0037201783694637 | 7 | | | | | | | | | | Position on chromosome: | 2:66797154-66797181 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | U__CC____U________CUGUUCUUG______ | 3' | | | _AC__CUAA_____AGCA_________CUUUGU | | | | _||__||||_____||||_________|||||| | | | | _UG__GAUU_____UCGU_________GAAACA | | (miRNA) | 3' | ___A_____UCCCU___________________ | 5' |
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| | | | | 25 | ENSG00000198408 (MGEA5) | hsa-miR-520h | 0.948909656623358 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 1852-1870 | 0.00818724797962486 | 0 | | | | | | | | | | Position on chromosome: | 10:103546052-103546070 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CUAUGUAAA____ACCCAUCA_________A | 3' | | | _________ACUC__________CACUUUG_ | | | | _________||||__________|||||||_ | | | | _________UGAG__________GUGAAAC_ | | (miRNA) | 3' | _____________AUUUCCCUUC_______A | 5' |
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| | | | | | | | | UTR3 | 7mer | 1405-1433 | 0.00453919294462531 | 1 | | | | | | | | | | Position on chromosome: | 10:103545605-103545633 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | ___G____UUC___CAUGUU_________ | 3' | | | ACU_UUGG___AGG______GUACUUUGU | | | | |||_.|..___|||______|.||||||| | | | | UGA_GAUU___UCC______CGUGAAACA | | (miRNA) | 3' | ______________CUU____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1341-1358 | 0.00506716561471991 | 6 | | | | | | | | | | Position on chromosome: | 10:103545541-103545558 | Conserved species: | panTro2,rheMac2,rn4,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | ACAAUUGACAA____GUAAAUUU__________ | 3' | | | ___________ACUU____________CUUUGU | | | | ___________|||.____________|||||| | | | | ___________UGAG____________GAAACA | | (miRNA) | 3' | _______________AUUUCCCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 1308-1330 | 0.00370868420377656 | 5 | | | | | | | | | | Position on chromosome: | 10:103545508-103545530 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | AAACUA___G___CCU__CUAUC______ | 3' | | | ______GCU_UAA___GA_____CUUUGU | | | | ______.||_|||___||_____|||||| | | | | ______UGA_AUU___CU_____GAAACA | | (miRNA) | 3' | _________G___UCC__UCGU_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1242-1269 | 0.0298153490893917 | 11 | | | | | | | | | | Position on chromosome: | 10:103545442-103545469 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | ______UGUUGGUUCAGAAU_________A | 3' | | | _AAGGG______________GGCACUUUG_ | | | | _|||||______________.||||||||_ | | | | _UUCCC______________UCGUGAAAC_ | | (miRNA) | 3' | U_____U______________________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 645-657 | 0.007140551873949 | 7 | | | | | | | | | | Position on chromosome: | 10:103544845-103544857 | Conserved species: | panTro2,rn4,mm9,oryCun2,canFam2,dasNov2,echTel1 | Binding area: | (Transcript) | 5' | GUAGUUUUGCAUCAG___UUUA___________A | 3' | | | _______________CUG_________ACUUUG_ | | | | _______________||._________||||||_ | | | | _______________GAU_________UGAAAC_ | | (miRNA) | 3' | ______________A___UUCCCUUCG______A | 5' |
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| | | | | 26 | ENSG00000094916 (CBX5) | hsa-miR-520h | 0.948473487126863 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 10783-10801 | 0.0131609437311677 | 9 | | | | | | | | | | Position on chromosome: | 12:54635507-54635525 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AGGGGAUGGU_____UCAUUU___U______ | 3' | | | __________CUCUG________C_CUUUGU | | | | __________||||.________|_|||||| | | | | __________GAGAU________G_GAAACA | | (miRNA) | 3' | _________U_____UUCCCUUC_U______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 9546-9564 | 0.00325305024568156 | 2 | | | | | | | | | | Position on chromosome: | 12:54634270-54634288 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GGCUACCGC__G___UCCC__________G | 3' | | | _________CU_UAA_____AGCACUUUG_ | | | | _________||_|||_____|||||||||_ | | | | _________GA_AUU_____UCGUGAAAC_ | | (miRNA) | 3' | ________U__G___UCCCU_________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6862-6887 | 0.00171077265149236 | 2 | | | | | | | | | | Position on chromosome: | 12:54631586-54631611 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUU_______UUCCA_UU__CCU______ | 3' | | | ___UUUUAAA_____G__GC___CUUUGU | | | | ___.|.||||_____|__||___|||||| | | | | ___GAGAUUU_____C__CG___GAAACA | | (miRNA) | 3' | __U_______CC____UU__U________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 6833-6852 | 0.000817605343418445 | 2 | | | | | | | | | | Position on chromosome: | 12:54631557-54631576 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GCUCUGUC_____UAAUACCUG______C | 3' | | | ________CUCUG_________ACUUUG_ | | | | ________||||._________||||||_ | | | | ________GAGAU_________UGAAAC_ | | (miRNA) | 3' | _______U_____UUCCCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 6621-6644 | 0.00225215068021716 | 2 | | | | | | | | | | Position on chromosome: | 12:54631345-54631368 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AAUUA_____________GUCAUUAG______ | 3' | | | _____CUGA___GAAGCA________CUUUGU | | | | _____||.|___||||||________|||||| | | | | _____GAUU___CUUCGU________GAAACA | | (miRNA) | 3' | ____A____UCC____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 6112-6127 | 0.00208691432873712 | 2 | | | | | | | | | | Position on chromosome: | 12:54630836-54630851 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UCCCCCAGCCAUA___CAUAC___________ | 3' | | | _____________CUG________UACUUUGU | | | | _____________||.________.||||||| | | | | _____________GAU________GUGAAACA | | (miRNA) | 3' | ____________A___UUCCCUUC________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 6098-6118 | 0.00100147036925353 | 2 | | | | | | | | | | Position on chromosome: | 12:54630822-54630842 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UGCAUACU______UGCAUUC_________ | 3' | | | ________ACUUUG________UACUUUGU | | | | ________|||.|.________.||||||| | | | | ________UGAGAU________GUGAAACA | | (miRNA) | 3' | ______________UUCCCUUC________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5812-5837 | 0.00153731150455198 | 2 | | | | | | | | | | Position on chromosome: | 12:54630536-54630561 | Conserved species: | panTro2,loxAfr3 | Binding area: | (Transcript) | 5' | AG_________CAUAAAAUAC_______C | 3' | | | __UUUUGAGGG__________UACUUUG_ | | | | __.|.|.|.||__________.||||||_ | | | | __GAGAUUUCC__________GUGAAAC_ | | (miRNA) | 3' | _U_________CUUC_____________A | 5' |
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| | | | | | | | | UTR3 | 7mer | 5738-5759 | 0.00134441475098195 | 2 | | | | | | | | | | Position on chromosome: | 12:54630462-54630483 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UCACAA________AAAAACC_______C | 3' | | | ______UUUAAAGG_______CACUUUG_ | | | | ______|.||||||_______|||||||_ | | | | ______AGAUUUCC_______GUGAAAC_ | | (miRNA) | 3' | _____G________CUUC__________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 4172-4188 | 0.0017688527571935 | 2 | | | | | | | | | | Position on chromosome: | 12:54628896-54628912 | Conserved species: | panTro2,dasNov2 | Binding area: | (Transcript) | 5' | CUGGAUAAUUG____UU__CUA______G | 3' | | | ___________AGAG__GA___ACUUUG_ | | | | ___________|.||__||___||||||_ | | | | ___________UUUC__CU___UGAAAC_ | | (miRNA) | 3' | __________A____C___UCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3985-4008 | 0.00228572769559605 | 5 | | | | | | | | | | Position on chromosome: | 12:54628709-54628732 | Conserved species: | panTro2,rheMac2,mm9,canFam2,echTel1 | Binding area: | (Transcript) | 5' | UGUC_______CAUUGU__UUG______G | 3' | | | ____ACUUUAA______GC___ACUUUG_ | | | | ____|||.|||______||___||||||_ | | | | ____UGAGAUU______CG___UGAAAC_ | | (miRNA) | 3' | ___________UCCCUU___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 982-1003 | 0.00272050995525993 | 3 | | | | | | | | | | Position on chromosome: | 12:54625706-54625727 | Conserved species: | panTro2,rheMac2,oryCun2 | Binding area: | (Transcript) | 5' | AGGACAG________UCACU___CCC______ | 3' | | | _______CU___GGG_____GUA___CUUUGU | | | | _______||___|||_____|.|___|||||| | | | | _______GA___CCC_____CGU___GAAACA | | (miRNA) | 3' | ______A__UUU___UU_______________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 730-750 | 0.00394896939789921 | 5 | | | | | | | | | | Position on chromosome: | 12:54625454-54625474 | Conserved species: | panTro2,rheMac2,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UUUUUCC______UUU____AAA______G | 3' | | | _______CUCUGG____GAG___ACUUUG_ | | | | _______||||..____.||___||||||_ | | | | _______GAGAUU____UUC___UGAAAC_ | | (miRNA) | 3' | ______U______UCCC___G________A | 5' |
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| | | | | | | | | UTR3 | 8mer | 310-317 | 0.0204230443605283 | 4 | | | | | | | | | | Position on chromosome: | 12:54625034-54625041 | Conserved species: | panTro2,rheMac2,rn4,bosTau4 | Binding area: | (Transcript) | 5' | UGUCCCAAAUAGCAAACAAAU________ | 3' | | | _____________________CACUUUGU | | | | _____________________|||||||| | | | | _____________________GUGAAACA | | (miRNA) | 3' | ____________________C________ | 5' |
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| | | | | 27 | ENSG00000268798 (AC027307.3) | hsa-miR-520h | 0.946681060456286 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 31-46 | 0.00698442425338782 | 1 | | | | | | | | | | Position on chromosome: | 19:1441307-1441322 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | CACCUCAGCCCA_____U__UA______C | 3' | | | ____________GAAGG_GG__ACUUUG_ | | | | ____________.||||_..__||||||_ | | | | ____________UUUCC_UU__UGAAAC_ | | (miRNA) | 3' | ___________A_____C__CG______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 414-436 | 0.0507375141732922 | 2 | | | | | | | | | | Position on chromosome: | 19:1441690-1441712 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GGUUC__G____UGAUCCU_________G | 3' | | | _____AC_UCUG_______AGCACUUUG_ | | | | _____||_|||._______|||||||||_ | | | | _____UG_AGAU_______UCGUGAAAC_ | | (miRNA) | 3' | ____________UUCCCU__________A | 5' |
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| | | | | 28 | ENSG00000134243 (SORT1) | hsa-miR-520h | 0.945755340573224 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 3655-3682 | 0.00388115179424556 | 6 | | | | | | | | | | Position on chromosome: | 1:109855847-109855874 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | C_______AUUUUUC____UGU_______ | 3' | | | _UUCUGAG_______AAGC___GCUUUGU | | | | _.|||.|._______||||___.|||||| | | | | _GAGAUUU_______UUCG___UGAAACA | | (miRNA) | 3' | U_______CCC__________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3338-3348 | 0.00253937025935683 | 1 | | | | | | | | | | Position on chromosome: | 1:109855530-109855540 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UCCUUCUCACCCCUUUU____________________C | 3' | | | _________________UUCUG_________ACUUUG_ | | | | _________________.|||._________||||||_ | | | | _________________GAGAU_________UGAAAC_ | | (miRNA) | 3' | ________________U_____UUCCCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 3264-3280 | 0.00172549472244349 | 5 | | | | | | | | | | Position on chromosome: | 1:109855456-109855472 | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ACACACUUCCAG______U___U_________ | 3' | | | ____________UCUAGA__GA___GCUUUGU | | | | ____________||||.|__||___.|||||| | | | | ____________AGAUUU__CU___UGAAACA | | (miRNA) | 3' | ___________G______CC__UCG_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2251-2262 | 0.00304238090428527 | 2 | | | | | | | | | | Position on chromosome: | 1:109854443-109854454 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUUACACAUGCGAGUG____C_____________A | 3' | | | ________________CUAA_______CACUUUG_ | | | | ________________||||_______|||||||_ | | | | ________________GAUU_______GUGAAAC_ | | (miRNA) | 3' | _______________A____UCCCUUC_______A | 5' |
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| | | | | | | | | UTR3 | 7mer | 73-93 | 0.0299040064148661 | 10 | | | | | | | | | | Position on chromosome: | 1:109852265-109852285 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | UAAAUAAA______U_U_UUUA_______ | 3' | | | ________UCUGAA_G_G____ACUUUGU | | | | ________|||.||_|_|____||||||| | | | | ________AGAUUU_C_C____UGAAACA | | (miRNA) | 3' | _______G______C___UUCG_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 12-24 | 0.0163322170616398 | 6 | | | | | | | | | | Position on chromosome: | 1:109852204-109852216 | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GGUUAAAAAUAAAACA__CU_G_______ | 3' | | | ________________GA__G_ACUUUGU | | | | ________________||__|_||||||| | | | | ________________CU__C_UGAAACA | | (miRNA) | 3' | _______________C__U__G_______ | 5' |
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| | | | | 29 | ENSG00000204116 (CHIC1) | hsa-miR-520h | 0.944480598940143 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 485-505 | 0.0317346559840317 | 9 | | | | | | | | | | Position on chromosome: | X:72901326-72901346 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AAUGGCA____UUUUGUCCU________C | 3' | | | _______CUGG_________GCACUUUG_ | | | | _______||.._________||||||||_ | | | | _______GAUU_________CGUGAAAC_ | | (miRNA) | 3' | ______A____UCCCUU___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2412-2431 | 0.00135610289259268 | 1 | | | | | | | | | | Position on chromosome: | X:72903253-72903272 | Conserved species: | rheMac2 | Binding area: | (Transcript) | 5' | UUUGUAAUG______C____UU_______ | 3' | | | _________UUUGGG_GGGG__GCUUUGU | | | | _________|.|..._||..__.|||||| | | | | _________AGAUUU_CCUU__UGAAACA | | (miRNA) | 3' | ________G______C____CG_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2589-2617 | 0.00268248548942335 | 6 | | | | | | | | | | Position on chromosome: | X:72903430-72903458 | Conserved species: | rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | _______A______AUUUUGAAUUU______ | 3' | | | _CUGAAG__AAGUA___________CUUUGU | | | | _||.|||__|||.|___________|||||| | | | | _GAUUUC__UUCGU___________GAAACA | | (miRNA) | 3' | A______CC______________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2899-2906 | 0.00186557471991136 | 2 | | | | | | | | | | Position on chromosome: | X:72903740-72903747 | Conserved species: | rheMac2,oryCun2 | Binding area: | (Transcript) | 5' | UCCAUCCCAGAUAUGUCUCCA_U______ | 3' | | | _____________________C_CUUUGU | | | | _____________________|_|||||| | | | | _____________________G_GAAACA | | (miRNA) | 3' | ____________________C_U______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3922-3936 | 0.00337110848406437 | 4 | | | | | | | | | | Position on chromosome: | X:72904763-72904777 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | GAGUAUGUUCCAUU_____U_______________ | 3' | | | ______________UUCUG____GA___ACUUUGU | | | | ______________.|||.____||___||||||| | | | | ______________GAGAU____CU___UGAAACA | | (miRNA) | 3' | _____________U_____UUCC__UCG_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 4393-4409 | 0.00326078263636394 | 4 | | | | | | | | | | Position on chromosome: | X:72905234-72905250 | Conserved species: | panTro2,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CAAUGGAAAUA_______ACC________G | 3' | | | ___________UUGGAGG____CACUUUG_ | | | | ___________.|..|||____|||||||_ | | | | ___________GAUUUCC____GUGAAAC_ | | (miRNA) | 3' | __________A_______CUUC_______A | 5' |
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| | | | | | | | | UTR3 | 6mer | 5538-5554 | 0.00493752176438716 | 2 | | | | | | | | | | Position on chromosome: | X:72906379-72906395 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AUUUCUCAAAUG____UUUAUUU__________ | 3' | | | ____________UUCU___________CUUUGU | | | | ____________.|||___________|||||| | | | | ____________GAGA___________GAAACA | | (miRNA) | 3' | ___________U____UUUCCCUUCGU______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5611-5629 | 0.00781470802677133 | 9 | | | | | | | | | | Position on chromosome: | X:72906452-72906470 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | GUAAAAUUG______UGCCU__G______A | 3' | | | _________UUUUAA______G_ACUUUG_ | | | | _________.|.|||______|_||||||_ | | | | _________GAGAUU______C_UGAAAC_ | | (miRNA) | 3' | ________U______UCCCUU_G______A | 5' |
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| | | | | 30 | ENSG00000009780 (FAM76A) | hsa-miR-520h | 0.944089194119621 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 105-130 | 0.0100182470985798 | 8 | | | | | | | | | | Position on chromosome: | 1:28087198-28087223 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UCU______UUAC_____UAUCCUU______ | 3' | | | ___AUUUUA______AGU_______CUUUGU | | | | ___|.|.||______||._______|||||| | | | | ___UGAGAU______UCG_______GAAACA | | (miRNA) | 3' | _________UUCCCU___U____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 450-461 | 0.00638205264410095 | 5 | | | | | | | | | | Position on chromosome: | 1:28087543-28087554 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | AUAUAUCACUGCCACC____________________A | 3' | | | ________________CUCUGA________ACUUUG_ | | | | ________________||||.|________||||||_ | | | | ________________GAGAUU________UGAAAC_ | | (miRNA) | 3' | _______________U______UCCCUUCG______A | 5' |
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| | | | | | | | | UTR3 | 7mer | 570-576 | 0.00927045885614732 | 9 | | | | | | | | | | Position on chromosome: | 1:28087663-28087669 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UUUCCAGAUGUAUUAUGUAUGA_______ | 3' | | | ______________________ACUUUGU | | | | ______________________||||||| | | | | ______________________UGAAACA | | (miRNA) | 3' | _____________________G_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1564-1580 | 0.00670296199914334 | 1 | | | | | | | | | | Position on chromosome: | 1:28088657-28088673 | Conserved species: | rheMac2 | Binding area: | (Transcript) | 5' | AAAACAGGUGC____CA______________C | 3' | | | ___________UUCU_____GAAGCACUUUG_ | | | | ___________.|||_____|||||||||||_ | | | | ___________GAGA_____CUUCGUGAAAC_ | | (miRNA) | 3' | __________U____UUUCC___________A | 5' |
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| | | | | | | | | UTR3 | 6mer | 2412-2440 | 0.012004187399202 | 9 | | | | | | | | | | Position on chromosome: | 1:28089505-28089533 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | _____U____U_____CCUUUUGUUU______ | 3' | | | ACUUU___GG_AA_CA__________CUUUGU | | | | |||.|___||_||_||__________|||||| | | | | UGAGA___CC_UU_GU__________GAAACA | | (miRNA) | 3' | _____UUU__C__C__________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2478-2498 | 0.0119400093624831 | 9 | | | | | | | | | | Position on chromosome: | 1:28089571-28089591 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AGGAAUG______UUUGUAC_________A | 3' | | | _______UUUUGG_______AG_ACUUUG_ | | | | _______.|.|.._______||_||||||_ | | | | _______GAGAUU_______UC_UGAAAC_ | | (miRNA) | 3' | ______U______UCCCU____G______A | 5' |
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| | | | | | | | | UTR3 | 8mer | 622-646 | 0.0142517274297715 | 0 | | | | | | | | | | Position on chromosome: | 1:28081729-28081753 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CUGG____ACC___CACUGAC________ | 3' | | | ____ACUC___AGG_______CACUUUGU | | | | ____||||___|||_______|||||||| | | | | ____UGAG___UCC_______GUGAAACA | | (miRNA) | 3' | ________AUU___CUUC___________ | 5' |
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