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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000049540 (ELN) | hsa-miR-29c-3p | 0.999999950432389 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 23-44 | 0.169289840452462 | 8 | | | | | | | | | | Position on chromosome: | 7:73483054-73483075 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GACUCAC____UCA_____CGU________ | 3' | | | _______GACC____UCAA___UGGUGCUA | | | | _______.|||____||||___|||||||| | | | | _______UUGG____AGUU___ACCACGAU | | (miRNA) | 3' | ______A____CUAA____U__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 285-303 | 0.108068100991977 | 7 | | | | | | | | | | Position on chromosome: | 7:73483316-73483334 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GCCUCCAUCU__A__GGAACU_________ | 3' | | | __________CC_GG_______UGGUGCUA | | | | __________||_|._______|||||||| | | | | __________GG_CU_______ACCACGAU | | (miRNA) | 3' | _________U_____AAAGUUU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 292-315 | 0.0266466672520754 | 7 | | | | | | | | | | Position on chromosome: | 7:73483323-73483346 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GGGG___U____GCUA__CGC_______C | 3' | | | ____AAC_UGGU____CA___UGGUGCU_ | | | | ____|||_.|.|____||___|||||||_ | | | | ____UUG_GCUA____GU___ACCACGA_ | | (miRNA) | 3' | ___A________AA____UU________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1619-1644 | 0.0048614107697771 | 0 | | | | | | | | | | Position on chromosome: | 7:73474513;73474706-73474514;73474729 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GCU____GCUG___CUGGGCU________ | 3' | | | ___CCGA____CAG_______UGGUGCUG | | | | ___||||____||._______|||||||. | | | | ___GGCU____GUU_______ACCACGAU | | (miRNA) | 3' | __U____AAA____U______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1678-1698 | 0.0048862937334376 | 0 | | | | | | | | | | Position on chromosome: | 7:73474763-73474783 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CGGCGUCC____AC__GG__U________ | 3' | | | ________CUGG__UU__AG_UGGUGCUG | | | | ________|.|.__||__|._|||||||. | | | | ________GGCU__AA__UU_ACCACGAU | | (miRNA) | 3' | _______U________AG__U________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1705-1725 | 0.00454759832473278 | 0 | | | | | | | | | | Position on chromosome: | 7:73474790-73474810 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UGGUGUUC____AC__GG__U________ | 3' | | | ________CUGG__UU__AG_UGGUGCUG | | | | ________|.|.__||__|._|||||||. | | | | ________GGCU__AA__UU_ACCACGAU | | (miRNA) | 3' | _______U________AG__U________ | 5' |
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| | | | | 2 | ENSG00000119778 (ATAD2B) | hsa-miR-29c-3p | 0.999999697916751 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 3231-3248 | 0.124940167638744 | 12 | | | | | | | | | | Position on chromosome: | 2:23974765-23974782 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUUCUUUCUCU___UUGA__UU________ | 3' | | | ___________CUG_____A__UGGUGCUA | | | | ___________|.|_____|__|||||||| | | | | ___________GGC_____U__ACCACGAU | | (miRNA) | 3' | __________U___UAAAG_UU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3116-3144 | 0.075767746804529 | 10 | | | | | | | | | | Position on chromosome: | 2:23974650-23974678 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | _____CCACAGCUUGGA_________________ | 3' | | | _AACC____________GAUUU____UGGUGCUA | | | | _||||____________|||||____|||||||| | | | | _UUGG____________CUAAA____ACCACGAU | | (miRNA) | 3' | A_____________________GUUU________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 385-406 | 0.120115022907161 | 9 | | | | | | | | | | Position on chromosome: | 2:23971919-23971940 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUGAUUA____________CU_________ | 3' | | | _______AGUUGG_UUCAG__AUGGUGCUA | | | | _______|...|._||||.__||||||||| | | | | _______UUGGCU_AAGUU__UACCACGAU | | (miRNA) | 3' | ______A______A________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3986-4013 | 0.0180340080885401 | 0 | | | | | | | | | | Position on chromosome: | 2:24111247;24118689-24111269;24118693 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | G___A____AACUUC____CC________ | 3' | | | _GCC_GGUU______UCAG__UGGUGCUA | | | | _.||_|.||______|||.__|||||||| | | | | _UGG_CUAA______AGUU__ACCACGAU | | (miRNA) | 3' | U__________________U_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2735-2754 | 0.0289929922910332 | 0 | | | | | | | | | | Position on chromosome: | 2:24056875-24056894 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UAGGGGUGA_____UUG___U_________ | 3' | | | _________AAUUG___UUA__UGGUGCUA | | | | _________||..|___|.|__|||||||| | | | | _________UUGGC___AGU__ACCACGAU | | (miRNA) | 3' | ________A_____UAA___UU________ | 5' |
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| | | | | 3 | ENSG00000105856 (HBP1) | hsa-miR-29c-3p | 0.999999358752498 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 269-289 | 0.161197318678017 | 13 | | | | | | | | | | Position on chromosome: | 7:106842146-106842166 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | GGCUUGAA_______A__CU_________ | 3' | | | ________AAUUGAU_UC__GUGGUGCUA | | | | ________||..|||_||__.|||||||| | | | | ________UUGGCUA_AG__UACCACGAU | | (miRNA) | 3' | _______A_______A__UU_________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 690-718 | 0.0825707282279498 | 7 | | | | | | | | | | Position on chromosome: | 7:106842567-106842595 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | ______GAUAUAG___CUGU__________ | 3' | | | _AUUGG_______UCA____AAUGGUGCUA | | | | _|..|._______|||____|||||||||| | | | | _UGGCU_______AGU____UUACCACGAU | | (miRNA) | 3' | U_____AA______________________ | 5' |
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| | | | | 4 | ENSG00000163359 (COL6A3) | hsa-miR-29c-3p | 0.999999172225553 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 589-609 | 0.253360518201379 | 13 | | | | | | | | | | Position on chromosome: | 2:238233244-238233264 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CUGCUGCA_____UA______U_________ | 3' | | | ________UGACC____UCAG_AUGGUGCUA | | | | ________|.|||____|||._||||||||| | | | | ________AUUGG____AGUU_UACCACGAU | | (miRNA) | 3' | _____________CUAA______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 7869-7897 | 0.00852808113537265 | 0 | | | | | | | | | | Position on chromosome: | 2:238289790-238289818 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | _____GGGGA___CU___CUUU________ | 3' | | | _CCGA_____UUC__AAG____UGGUGCUG | | | | _||||_____|||__||.____|||||||. | | | | _GGCU_____AAG__UUU____ACCACGAU | | (miRNA) | 3' | U____A________________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 6696-6722 | 0.00279389837476441 | 0 | | | | | | | | | | Position on chromosome: | 2:238285647-238285673 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AG___G__GUGC_____UUCC________ | 3' | | | __GAU_GA____UUCAG____UGGUGCUG | | | | __.|._||____||||.____|||||||. | | | | __UUG_CU____AAGUU____ACCACGAU | | (miRNA) | 3' | _A___G__A________U___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2757-2784 | 0.00223613414872133 | 0 | | | | | | | | | | Position on chromosome: | 2:238259812;238261165-238259835;238261168 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | _____GGAAG____GGUGCCGC_______C | 3' | | | _UCGG_____CGGA________UGGUGCU_ | | | | _.||._____|..|________|||||||_ | | | | _GGCU_____GUUU________ACCACGA_ | | (miRNA) | 3' | U____AAA_____________________U | 5' |
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| | | | | 5 | ENSG00000187231 (SESTD1) | hsa-miR-29c-3p | 0.99999843302191 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 7895-7922 | 0.194488425424146 | 13 | | | | | | | | | | Position on chromosome: | 2:179974314-179974341 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | C_______AAUAAGC______________ | 3' | | | _AACUGAU_______UUUGAAUGGUGCUA | | | | _|||.|||_______||..|||||||||| | | | | _UUGGCUA_______AAGUUUACCACGAU | | (miRNA) | 3' | A____________________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 6140-6163 | 0.0346764708069162 | 7 | | | | | | | | | | Position on chromosome: | 2:179972559-179972582 | Conserved species: | panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UAUUU_______UCUUCAUG_________ | 3' | | | _____AUUUCAG________AUGGUGCUA | | | | _____||||||.________||||||||| | | | | _____UAAAGUU________UACCACGAU | | (miRNA) | 3' | ____C________________________ | 5' |
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| | | | | 6 | ENSG00000038295 (TLL1) | hsa-miR-29c-3p | 0.999998073989563 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 3764-3786 | 0.225793104872914 | 13 | | | | | | | | | | Position on chromosome: | 4:167023106-167023128 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UUGUUU____AAGAC___UU_________ | 3' | | | ______CUGA_____UUC__AUGGUGCUA | | | | ______|.||_____|||__||||||||| | | | | ______GGCU_____AAG__UACCACGAU | | (miRNA) | 3' | _____U____A_______UU_________ | 5' |
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| | | | | 7 | ENSG00000188153 (COL4A5) | hsa-miR-29c-3p | 0.99999736474904 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 97-112 | 0.187471251390466 | 14 | | | | | | | | | | Position on chromosome: | X:107939706-107939721 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,danRer6 | Binding area: | (Transcript) | 5' | CUUUACUACUGCU____________________ | 3' | | | _____________GCCG___UC_AAUGGUGCUA | | | | _____________.|||___||_|||||||||| | | | | _____________UGGC___AG_UUACCACGAU | | (miRNA) | 3' | ____________U____UAA__U__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 374-393 | 0.033197561086291 | 12 | | | | | | | | | | Position on chromosome: | X:107939983-107940002 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGUGGGAAG____AUU_____C_________ | 3' | | | _________AAUU___UUUCA___GGUGCUA | | | | _________||..___|||||___||||||| | | | | _________UUGG___AAAGU___CCACGAU | | (miRNA) | 3' | ________A____CU______UUA_______ | 5' |
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| | | | | 8 | ENSG00000187498 (COL4A1) | hsa-miR-29c-3p | 0.999996662625981 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1355-1378 | 0.186924020744289 | 13 | | | | | | | | | | Position on chromosome: | 13:110802673-110802696 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GACUC____A__G___CAAC_________ | 3' | | | _____AGCU_AU_UCA____AUGGUGCUA | | | | _____|.|._||_|||____||||||||| | | | | _____UUGG_UA_AGU____UACCACGAU | | (miRNA) | 3' | ____A____C__A___U____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1078-1099 | 0.0298842435511482 | 10 | | | | | | | | | | Position on chromosome: | 13:110802396-110802417 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GAACUCC___A__AAAC___AG_______ | 3' | | | _______AUC_GA____CAA__GGUGCUA | | | | _______|.|_||____|||__||||||| | | | | _______UGG_CU____GUU__CCACGAU | | (miRNA) | 3' | ______U______AAA____UA_______ | 5' |
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| | | | | 9 | ENSG00000183496 (MEX3B) | hsa-miR-29c-3p | 0.999993445542816 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 948-970 | 0.00309617817992942 | 7 | | | | | | | | | | Position on chromosome: | 15:82335076-82335098 | Conserved species: | panTro2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UAAUUA____GA______AUAGUA______ | 3' | | | ______UGAU___AGAUG______GUGCUA | | | | ______.|||___|.|||______|||||| | | | | ______GCUA___UUUAC______CACGAU | | (miRNA) | 3' | _____G____AAG_________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 41-59 | 0.202680504285468 | 15 | | | | | | | | | | Position on chromosome: | 15:82334169-82334187 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | AUAAAGGUAA____UAAGU____________ | 3' | | | __________AACU_______AAUGGUGCUA | | | | __________|||._______|||||||||| | | | | __________UUGG_______UUACCACGAU | | (miRNA) | 3' | _________A____CUAAAGU__________ | 5' |
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| | | | | 10 | ENSG00000136381 (IREB2) | hsa-miR-29c-3p | 0.999983219947832 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 166-194 | 0.216518272854972 | 11 | | | | | | | | | | Position on chromosome: | 15:78790652-78790680 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | _______UAAAUAAUAUA____________ | 3' | | | _UGAUUU___________CGAAUGGUGCUA | | | | _.|||||___________|.|||||||||| | | | | _GCUAAA___________GUUUACCACGAU | | (miRNA) | 3' | G_____________________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 928-948 | 0.00273047259924386 | 1 | | | | | | | | | | Position on chromosome: | 15:78791414-78791434 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AUUAUCC___C_______UAAUACG______C | 3' | | | _______ACC____UCAA_______GGUGCU_ | | | | _______|||____||||_______||||||_ | | | | _______UGG____AGUU_______CCACGA_ | | (miRNA) | 3' | ______U___CUAA____UA___________U | 5' |
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| | | | | | | | | UTR3 | 9mer | 1125-1140 | 0.0346405934968239 | 0 | | | | | | | | | | Position on chromosome: | 15:78768632-78768647 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AGCAAACAUGUGU____AAU____________ | 3' | | | _____________CCGG______AUGGUGCUA | | | | _____________|||.______||||||||| | | | | _____________GGCU______UACCACGAU | | (miRNA) | 3' | ____________U____AAAGUU_________ | 5' |
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| | | | | 11 | ENSG00000017427 (IGF1) | hsa-miR-29c-3p | 0.999974369016758 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 5732-5755 | 0.115369215684502 | 11 | | | | | | | | | | Position on chromosome: | 12:102795377-102795400 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AAACU___UU______UAUA_________ | 3' | | | _____CUG__UUUUAG____AUGGUGCUA | | | | _____|.|__|||.|.____||||||||| | | | | _____GGC__AAAGUU____UACCACGAU | | (miRNA) | 3' | ____U___U____________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2969-2994 | 0.068119619829673 | 13 | | | | | | | | | | Position on chromosome: | 12:102792614-102792639 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GUU_____A_CU__GC___U_________ | 3' | | | ___UGGCC_G__AU__CAA_GUGGUGCUA | | | | ___|..||_|__||__|||_.|||||||| | | | | ___AUUGG_C__UA__GUU_UACCACGAU | | (miRNA) | 3' | ______________AA_____________ | 5' |
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| | | | | 12 | ENSG00000156103 (MMP16) | hsa-miR-29c-3p | 0.999968258984861 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 5029-5048 | 0.0020756145897153 | 7 | | | | | | | | | | Position on chromosome: | 8:89049266-89049285 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UGUCCAUAU_____AAAC_____________ | 3' | | | _________UAACU____UCAAA__GUGCUA | | | | _________||||.____|||||__|||||| | | | | _________AUUGG____AGUUU__CACGAU | | (miRNA) | 3' | ______________CUAA_____AC______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2864-2880 | 0.0114896516913976 | 6 | | | | | | | | | | Position on chromosome: | 8:89047101-89047117 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | GCAUUUUCCUAG___AGGAU_________ | 3' | | | ____________GAU_____AUGGUGCUG | | | | ____________|||_____||||||||. | | | | ____________CUA_____UACCACGAU | | (miRNA) | 3' | ___________G___AAGUU_________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 630-641 | 0.149457250418995 | 11 | | | | | | | | | | Position on chromosome: | 8:89044867-89044878 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GCAAAUAUAAGGCUAAA____________ | 3' | | | _________________UAAAUGGUGCUA | | | | _________________.||||||||||| | | | | _________________GUUUACCACGAU | | (miRNA) | 3' | ________________A____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 582-605 | 0.0169717550543155 | 11 | | | | | | | | | | Position on chromosome: | 8:89044819-89044842 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AUAA____A__CAAAA______________U | 3' | | | ____AAUC_GG_____UUUU__GUGGUGCU_ | | | | ____||.|_|._____|||.__.|||||||_ | | | | ____UUGG_CU_____AAAG__UACCACGA_ | | (miRNA) | 3' | ___A________________UU________U | 5' |
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| | | | | 13 | ENSG00000215301 (DDX3X) | hsa-miR-29c-3p | 0.999960459175885 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1483-1507 | 0.176402986828386 | 15 | | | | | | | | | | Position on chromosome: | X:41208456-41208480 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | CAGU_____GG___UUUGUU_________ | 3' | | | ____AUUGA__UCA______AUGGUGCUA | | | | ____|..||__|||______||||||||| | | | | ____UGGCU__AGU______UACCACGAU | | (miRNA) | 3' | ___U_____AA___U______________ | 5' |
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| | | | | 14 | ENSG00000187605 (TET3) | hsa-miR-29c-3p | 0.999958373383265 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 38-58 | 0.022904084328287 | 9 | | | | | | | | | | Position on chromosome: | 2:74329342-74329362 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GCCUGGC____GCUG__UCU________U | 3' | | | _______CCGA____UC___GUGGUGCU_ | | | | _______||||____||___.|||||||_ | | | | _______GGCU____AG___UACCACGA_ | | (miRNA) | 3' | ______U____AA____UU_________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1053-1075 | 0.00322124264034974 | 2 | | | | | | | | | | Position on chromosome: | 2:74330357-74330379 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | ACCCA_____UGAAAAG_C_________C | 3' | | | _____AGCUG_______C_AGUGGUGCU_ | | | | _____|.|.|_______|_|.|||||||_ | | | | _____UUGGC_______G_UUACCACGA_ | | (miRNA) | 3' | ____A_____UAAA____U_________U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1063-1090 | 0.00301172970542674 | 2 | | | | | | | | | | Position on chromosome: | 2:74330367-74330394 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | A____AGU___GC__UGUGC_________ | 3' | | | _AGCC___GGU__UC_____AUGGUGCUG | | | | _|.||___|.|__||_____||||||||. | | | | _UUGG___CUA__AG_____UACCACGAU | | (miRNA) | 3' | A__________A___UU____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1089-1107 | 0.00537929025487928 | 11 | | | | | | | | | | Position on chromosome: | 2:74330393-74330411 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UGCAUGGUGC__UG___AG__C__________ | 3' | | | __________UG__CGG___C___UGGUGCUG | | | | __________|.__||.___|___|||||||. | | | | __________AU__GCU___G___ACCACGAU | | (miRNA) | 3' | ____________UG___AAA_UUU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1462-1476 | 0.00924145693587833 | 9 | | | | | | | | | | Position on chromosome: | 2:74330766-74330780 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | CGGUUCUUUGAAA___GAAU__________U | 3' | | | _____________UGA______GUGGUGCU_ | | | | _____________.||______.|||||||_ | | | | _____________GCU______UACCACGA_ | | (miRNA) | 3' | ____________G___AAAGUU________U | 5' |
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| | | | | | | | | UTR3 | 8mer | 3227-3255 | 0.0216492160267435 | 9 | | | | | | | | | | Position on chromosome: | 2:74332531-74332559 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | ____A____CUCA____AUAAC________ | 3' | | | _AGC_GGUU____CAAA_____UGGUGCUA | | | | _|.|_|.||____||||_____|||||||| | | | | _UUG_CUAA____GUUU_____ACCACGAU | | (miRNA) | 3' | A___G____A____________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3793-3814 | 0.0573687740900245 | 10 | | | | | | | | | | Position on chromosome: | 2:74333097-74333118 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AUUGAAA_____UAAAUA___________ | 3' | | | _______UAGUC______AAAUGGUGCUA | | | | _______||..|______||||||||||| | | | | _______AUUGG______UUUACCACGAU | | (miRNA) | 3' | ____________CUAAAG___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3837-3861 | 0.00433862034626106 | 9 | | | | | | | | | | Position on chromosome: | 2:74333141-74333165 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GUCC_____CCUG__UUGCUGA_______ | 3' | | | ____CUGAU____UC_______GGUGCUA | | | | ____|.|||____||_______||||||| | | | | ____GGCUA____AG_______CCACGAU | | (miRNA) | 3' | ___U_____A_____UUUA__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3931-3947 | 0.00470312494567834 | 7 | | | | | | | | | | Position on chromosome: | 2:74333235-74333251 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UUUUUUUUCCCU__CC____UUU________ | 3' | | | ____________CC____UC___UGGUGCUG | | | | ____________||____||___|||||||. | | | | ____________GG____AG___ACCACGAU | | (miRNA) | 3' | ___________U__CUAA__UUU________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3953-3970 | 0.000754073008802846 | 5 | | | | | | | | | | Position on chromosome: | 2:74333257-74333274 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GUGCUGUCUUA____C____ACC_________ | 3' | | | ___________GACC_GUUU______GUGCUA | | | | ___________.|||_.|||______|||||| | | | | ___________UUGG_UAAA______CACGAU | | (miRNA) | 3' | __________A____C____GUUUAC______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4081-4099 | 0.000861744780138447 | 0 | | | | | | | | | | Position on chromosome: | 2:74333385-74333403 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AGUGGGCCU___U__CU_GG___________U | 3' | | | _________GCC_GG__U__CA___GGUGCU_ | | | | _________.||_|.__|__||___||||||_ | | | | _________UGG_CU__A__GU___CCACGA_ | | (miRNA) | 3' | ________U_________AA__UUA______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 4250-4263 | 0.00468090964133421 | 5 | | | | | | | | | | Position on chromosome: | 2:74333554-74333567 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | Binding area: | (Transcript) | 5' | CAGAUUUUCUCCUGC_____________________ | 3' | | | _______________AGCC_____CAG__GGUGCUA | | | | _______________|.||_____||.__||||||| | | | | _______________UUGG_____GUU__CCACGAU | | (miRNA) | 3' | ______________A____CUAAA___UA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 4457-4478 | 0.0514510153896368 | 11 | | | | | | | | | | Position on chromosome: | 2:74333761-74333782 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CCACUGA_____CU______U________ | 3' | | | _______GGCUG__UUUUAG_UGGUGCUA | | | | _______..|.|__|||.|._|||||||| | | | | _______UUGGC__AAAGUU_ACCACGAU | | (miRNA) | 3' | ______A_____U_______U________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 5017-5036 | 0.00242287002891568 | 2 | | | | | | | | | | Position on chromosome: | 2:74334321-74334340 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GGGGGGAG__G___CCCCCUC_______C | 3' | | | ________GG_CGG_______UGGUGCU_ | | | | ________.._||._______|||||||_ | | | | ________UU_GCU_______ACCACGA_ | | (miRNA) | 3' | _______A__G___AAAGUUU_______U | 5' |
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| | | | | | | | | UTR3 | 9mer | 56-72 | 0.018528884046793 | 0 | | | | | | | | | | Position on chromosome: | 2:74273506-74273522 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CGCCUCAGGGGU____________________ | 3' | | | ____________GCCGG__UC_AAUGGUGCUA | | | | ____________.|||.__||_|||||||||| | | | | ____________UGGCU__AG_UUACCACGAU | | (miRNA) | 3' | ___________U_____AA__U__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3582-3600 | 0.00540387875696105 | 0 | | | | | | | | | | Position on chromosome: | 2:74327903-74327921 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CAGCCUGAGC____CCUAC__________ | 3' | | | __________CCGG_____GGUGGUGCUG | | | | __________|||._____..|||||||. | | | | __________GGCU_____UUACCACGAU | | (miRNA) | 3' | _________U____AAAGU__________ | 5' |
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| | | | | 15 | ENSG00000135473 (PAN2) | hsa-miR-29c-3p | 0.99995481486714 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1246-1262 | 0.164773387757966 | 8 | | | | | | | | | | Position on chromosome: | 12:56711253-56711269 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | CUCAGGGUCUAG___CA____________ | 3' | | | ____________GGU__CAGAUGGUGCUA | | | | ____________|.|__||.||||||||| | | | | ____________CUA__GUUUACCACGAU | | (miRNA) | 3' | ___________G___AA____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 154-174 | 0.00535236153832565 | 4 | | | | | | | | | | Position on chromosome: | 12:56710161-56710181 | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2 | Binding area: | (Transcript) | 5' | AGUUGCUC__AAA___GGG__C__________ | 3' | | | ________AC___GAU___UC____GGUGCUG | | | | ________||___|||___||____||||||. | | | | ________UG___CUA___AG____CCACGAU | | (miRNA) | 3' | _______U__G_____A____UUUA_______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 147-162 | 0.00409629924957599 | 4 | | | | | | | | | | Position on chromosome: | 12:56710154-56710169 | Conserved species: | panTro2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ACAAAGAUGGGU_____GCUGC________U | 3' | | | ____________CCGGU_______GGUGCU_ | | | | ____________|||.|_______||||||_ | | | | ____________GGCUA_______CCACGA_ | | (miRNA) | 3' | ___________U_____AAGUUUA______U | 5' |
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| | | | | 16 | ENSG00000168542 (COL3A1) | hsa-miR-29c-3p | 0.999939735517486 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 221-248 | 0.1555363214272 | 10 | | | | | | | | | | Position on chromosome: | 2:189876722-189876749 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,xenTro2 | Binding area: | (Transcript) | 5' | U__A_______AAUGUCUCA_________ | 3' | | | _CC_AUUUCAA_________AUGGUGCUA | | | | _||_|||||||_________||||||||| | | | | _GG_UAAAGUU_________UACCACGAU | | (miRNA) | 3' | U__C_________________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 595-613 | 0.0084932200695535 | 10 | | | | | | | | | | Position on chromosome: | 2:189877096-189877114 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UUGGAUAUC_____C__G___________C | 3' | | | _________AACUG_UU_UAAA_GGUGCU_ | | | | _________|||.|_||_.|||_||||||_ | | | | _________UUGGC_AA_GUUU_CCACGA_ | | (miRNA) | 3' | ________A_____U__A____A______U | 5' |
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| | | | | | | | | UTR3 | 9mer | 672-688 | 0.0972270993143993 | 9 | | | | | | | | | | Position on chromosome: | 2:189877173-189877189 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AGGCUUUAAAGA__C__GUU___________ | 3' | | | ____________CG_AU_____AUGGUGCUA | | | | ____________||_||_____||||||||| | | | | ____________GC_UA_____UACCACGAU | | (miRNA) | 3' | ___________G_____AAGUU_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 636-660 | 0.020821690625341 | 0 | | | | | | | | | | Position on chromosome: | 2:189853370;189854122-189853369;189854146 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UUCA____CUC______ACCUCC________ | 3' | | | ____GGCC_____CAGG______UGGUGCUA | | | | ____..||_____||..______|||||||| | | | | ____UUGG_____GUUU______ACCACGAU | | (miRNA) | 3' | ___A____CUAAA__________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1020-1047 | 0.0184539422613692 | 0 | | | | | | | | | | Position on chromosome: | 2:189857637-189857664 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | U_____A___CCUGGAUCCCC________ | 3' | | | _GCCGG_UUC___________UGGUGCUA | | | | _.|||._|||___________|||||||| | | | | _UGGCU_AAG___________ACCACGAU | | (miRNA) | 3' | U_____A___UUU________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1109-1136 | 0.00698320447473219 | 0 | | | | | | | | | | Position on chromosome: | 2:189858146-189858173 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ____U__ACC_____GACACGC_______C | 3' | | | _ACC_GG___UCAGG_______UGGUGCU_ | | | | _|||_|.___|||.._______|||||||_ | | | | _UGG_CU___AGUUU_______ACCACGA_ | | (miRNA) | 3' | U______AA____________________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1235-1263 | 0.00341067822912494 | 0 | | | | | | | | | | Position on chromosome: | 2:189859001-189859029 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | _____GG_CCUCCAGGAC___CC_______ | 3' | | | _CCGG__U__________CAG__GGUGCUA | | | | _|||.__|__________||.__||||||| | | | | _GGCU__A__________GUU__CCACGAU | | (miRNA) | 3' | U____AA______________UA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1253-1271 | 0.00451068157444237 | 0 | | | | | | | | | | Position on chromosome: | 2:189859019-189859037 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCCAGGACC_______GCU__________C | 3' | | | _________AGCCGGU____AAUGGUGCU_ | | | | _________|.|||.|____|||||||||_ | | | | _________UUGGCUA____UUACCACGA_ | | (miRNA) | 3' | ________A_______AAGU_________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1515-1532 | 0.00213201432136134 | 0 | | | | | | | | | | Position on chromosome: | 2:189860424-189860441 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAAGGGUCCU_____AGAG___________C | 3' | | | __________GCUGG____CG__UGGUGCU_ | | | | __________.|.|.____|.__|||||||_ | | | | __________UGGCU____GU__ACCACGA_ | | (miRNA) | 3' | _________U_____AAA___UU_______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1741-1766 | 0.0131736786438044 | 0 | | | | | | | | | | Position on chromosome: | 2:189861203;189861891-189861222;189861896 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CC_____CC___AGGAAAUG________C | 3' | | | __CCGGU__UAA________AUGGUGCU_ | | | | __|||.|__.||________||||||||_ | | | | __GGCUA__GUU________UACCACGA_ | | (miRNA) | 3' | _U_____AA___________________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 2137-2154 | 0.0016825648435431 | 0 | | | | | | | | | | Position on chromosome: | 2:189864212-189864229 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UGCUGGUCCUC____GC___CC________ | 3' | | | ___________CUGG___CA__UGGUGCUG | | | | ___________|.|.___||__|||||||. | | | | ___________GGCU___GU__ACCACGAU | | (miRNA) | 3' | __________U____AAA__UU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2424-2441 | 0.00377753081706779 | 0 | | | | | | | | | | Position on chromosome: | 2:189867057-189867074 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCCAGGACCU_________CC________C | 3' | | | __________GCUGGUUUC___UGGUGCU_ | | | | __________.|.|.||||___|||||||_ | | | | __________UGGCUAAAG___ACCACGA_ | | (miRNA) | 3' | _________U_________UUU_______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 2596-2613 | 0.0034520827709025 | 0 | | | | | | | | | | Position on chromosome: | 2:189868180;189868460-189868190;189868466 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACGUGGCAGUC_____GGACC_________ | 3' | | | ___________CUGGU______UGGUGCUG | | | | ___________|.|.|______|||||||. | | | | ___________GGCUA______ACCACGAU | | (miRNA) | 3' | __________U_____AAGUUU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2613-2630 | 0.00232823837739516 | 0 | | | | | | | | | | Position on chromosome: | 2:189868466-189868483 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACCUGGUGCU_____C___CC________C | 3' | | | __________GCUGG_UUC___UGGUGCU_ | | | | __________.|.|._|||___|||||||_ | | | | __________UGGCU_AAG___ACCACGA_ | | (miRNA) | 3' | _________U_____A___UUU_______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 2722-2738 | 0.0024865046865757 | 0 | | | | | | | | | | Position on chromosome: | 2:189868769-189868785 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCCAGGUCCUG___G_____CAC_______C | 3' | | | ___________CGG___UAA___UGGUGCU_ | | | | ___________||.___.||___|||||||_ | | | | ___________GCU___GUU___ACCACGA_ | | (miRNA) | 3' | __________G___AAA___U_________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 3207-3224 | 0.00353031760172679 | 0 | | | | | | | | | | Position on chromosome: | 2:189871669-189871686 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAGUGGCCCU_____CCCUGC________C | 3' | | | __________GCUGG_______UGGUGCU_ | | | | __________.|.|._______|||||||_ | | | | __________UGGCU_______ACCACGA_ | | (miRNA) | 3' | _________U_____AAAGUUU_______U | 5' |
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| | | | | 17 | ENSG00000169855 (ROBO1) | hsa-miR-29c-3p | 0.99991665233267 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 315-336 | 0.164214800434923 | 11 | | | | | | | | | | Position on chromosome: | 3:78646705-78646726 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GAAUAUC__________UAAU________ | 3' | | | _______AUUGAUUUUA____UGGUGCUA | | | | _______|..|||||.|____|||||||| | | | | _______UGGCUAAAGU____ACCACGAU | | (miRNA) | 3' | ______U__________UU__________ | 5' |
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| | | | | 18 | ENSG00000162599 (NFIA) | hsa-miR-29c-3p | 0.999908743728109 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 219-246 | 0.0480512259678331 | 11 | | | | | | | | | | Position on chromosome: | 1:61921212-61921239 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | G_____UUGUA_____UCAU_________ | 3' | | | _GACUG_____AUUUC____AUGGUGCUG | | | | _.||.|_____|||||____||||||||. | | | | _UUGGC_____UAAAG____UACCACGAU | | (miRNA) | 3' | A_______________UU___________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1072-1089 | 0.042195798747916 | 13 | | | | | | | | | | Position on chromosome: | 1:61922065-61922082 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AAAACAAAAA___AAA____U_________U | 3' | | | __________AAC_____UC_AAUGGUGCU_ | | | | __________|||_____||_|||||||||_ | | | | __________UUG_____AG_UUACCACGA_ | | (miRNA) | 3' | _________A___GCUAA__U_________U | 5' |
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| | | | | | | | | UTR3 | 6mer | 2138-2154 | 0.0024027723309544 | 12 | | | | | | | | | | Position on chromosome: | 1:61923131-61923147 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AUUGUCCUGUAC_______GG____________ | 3' | | | ____________GGUCGGU__CA____GUGCUA | | | | ____________...||.|__||____|||||| | | | | ____________UUGGCUA__GU____CACGAU | | (miRNA) | 3' | ___________A_______AA__UUAC______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 2326-2343 | 0.00225290653647869 | 9 | | | | | | | | | | Position on chromosome: | 1:61923319-61923336 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UUUUUUUUAUU_____A_________C_______ | 3' | | | ___________UGACC______AAGU_GGUGCUG | | | | ___________|.|||______||.|_||||||. | | | | ___________AUUGG______UUUA_CCACGAU | | (miRNA) | 3' | ________________CUAAAG____________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 5082-5100 | 0.0528588875132797 | 12 | | | | | | | | | | Position on chromosome: | 1:61926075-61926093 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GUUUAAUGCA____C___A____________ | 3' | | | __________AAUC_AUU_C__AUGGUGCUA | | | | __________||.|_|||_|__||||||||| | | | | __________UUGG_UAA_G__UACCACGAU | | (miRNA) | 3' | _________A____C___A_UU_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 6427-6455 | 0.0023716451834552 | 7 | | | | | | | | | | Position on chromosome: | 1:61927420-61927448 | Conserved species: | panTro2,rheMac2,rn4,mm9,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | _____ACAAGAG__UAC____GAA______ | 3' | | | _AACC_______CA___AGUG___GUGCUA | | | | _||||_______||___|.||___|||||| | | | | _UUGG_______GU___UUAC___CACGAU | | (miRNA) | 3' | A____CUAAA____________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 7350-7377 | 0.0125998378335907 | 12 | | | | | | | | | | Position on chromosome: | 1:61928343-61928370 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | U____UCU__UA_____CCAUUA______ | 3' | | | _UAAC___UG__UUCAA______GUGCUA | | | | _||||___.|__|||||______|||||| | | | | _AUUG___GC__AAGUU______CACGAU | | (miRNA) | 3' | __________UA_____UAC_________ | 5' |
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| | | | | 19 | ENSG00000249158 (PCDHA11) | hsa-miR-29c-3p | 0.999908704085363 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165421972097066 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1197-1223 | 0.00495672135481281 | 0 | | | | | | | | | | Position on chromosome: | 5:140249886-140249912 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CC______AAUUACUACUCGU________ | 3' | | | __UUCAAG_____________UGGUGCUG | | | | __|||||._____________|||||||. | | | | __AAGUUU_____________ACCACGAU | | (miRNA) | 3' | _A___________________________ | 5' |
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| | | | | 20 | ENSG00000080573 (COL5A3) | hsa-miR-29c-3p | 0.999908581009285 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 791-811 | 0.0238374733306684 | 6 | | | | | | | | | | Position on chromosome: | 19:10071028-10071048 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AGCCCCAG___G__GUG__UU________ | 3' | | | ________AAU_GG___CA__UGGUGCUG | | | | ________||._|.___||__|||||||. | | | | ________UUG_CU___GU__ACCACGAU | | (miRNA) | 3' | _______A___G__AAA__UU________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 687-702 | 0.00250035283088128 | 1 | | | | | | | | | | Position on chromosome: | 19:10070924-10070939 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGUCAUUCCUUCU________CAG________ | 3' | | | _____________CC__UUUC____GGUGCUG | | | | _____________||__||||____||||||. | | | | _____________GG__AAAG____CCACGAU | | (miRNA) | 3' | ____________U__CU____UUUA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 458-483 | 0.0867683787316888 | 10 | | | | | | | | | | Position on chromosome: | 19:10070695-10070720 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GUC____CCC____CACCUUU________ | 3' | | | ___GCUG___UUCA_______UGGUGCUA | | | | ___.|.|___||||_______|||||||| | | | | ___UGGC___AAGU_______ACCACGAU | | (miRNA) | 3' | __U____UA_____UU_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 180-201 | 0.0578444117086727 | 10 | | | | | | | | | | Position on chromosome: | 19:10070417-10070438 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GGGGGUG____A__AUCCU__________ | 3' | | | _______AAUC_GG_____AAUGGUGCUG | | | | _______||.|_|._____|||||||||. | | | | _______UUGG_CU_____UUACCACGAU | | (miRNA) | 3' | ______A_______AAAGU__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 4121-4140 | 0.00575545667611511 | 0 | | | | | | | | | | Position on chromosome: | 19:10108819;10112200-10108825;10112212 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GACUCAGUU__A___CU___C__________ | 3' | | | _________CC_GAU__UUC___UGGUGCUG | | | | _________||_|||__|||___|||||||. | | | | _________GG_CUA__AAG___ACCACGAU | | (miRNA) | 3' | ________U___________UUU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3366-3385 | 0.00862299175479 | 0 | | | | | | | | | | Position on chromosome: | 19:10102701-10102720 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCCGGGUG_______AAUU__________C | 3' | | | ________UGACUGG_____GAUGGUGCU_ | | | | ________|.||.|._____.||||||||_ | | | | ________AUUGGCU_____UUACCACGA_ | | (miRNA) | 3' | _______________AAAGU_________U | 5' |
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| | | | | 21 | ENSG00000162849 (KIF26B) | hsa-miR-29c-3p | 0.999899235733329 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 460-471 | 0.148449217921115 | 14 | | | | | | | | | | Position on chromosome: | 1:245866369-245866380 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | UCAUACUUUCUUGUGUA____________ | 3' | | | _________________CAGAUGGUGCUA | | | | _________________||.||||||||| | | | | _________________GUUUACCACGAU | | (miRNA) | 3' | ________________A____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 782-803 | 0.00272813964185132 | 5 | | | | | | | | | | Position on chromosome: | 1:245866691-245866712 | Conserved species: | panTro2,rheMac2,mm9,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | CCAGAA________G_GG_GCA______U | 3' | | | ______GGUUGAUU_U__G___GGUGCU_ | | | | ______....||||_.__.___||||||_ | | | | ______UUGGCUAA_G__U___CCACGA_ | | (miRNA) | 3' | _____A________A_UU_A________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1492-1512 | 0.00335341657819349 | 1 | | | | | | | | | | Position on chromosome: | 1:245867401-245867421 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GGAUUUCC_____AAA__CU_________ | 3' | | | ________CUGAU___AG__GUGGUGCUG | | | | ________|.|||___|.__.|||||||. | | | | ________GGCUA___UU__UACCACGAU | | (miRNA) | 3' | _______U_____AAG_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3115-3129 | 0.00425649048671469 | 0 | | | | | | | | | | Position on chromosome: | 1:245869024-245869038 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CUAAGAUCUAAGAA___G______________ | 3' | | | ______________CGG___C_GGUGGUGCUA | | | | ______________||.___|_..|||||||| | | | | ______________GCU___G_UUACCACGAU | | (miRNA) | 3' | _____________G___AAA_U__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3155-3175 | 0.000664760166260768 | 1 | | | | | | | | | | Position on chromosome: | 1:245869064-245869084 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | ACUCCACG___C___G__C__________ | 3' | | | ________UCG_AUU_CA_GGUGGUGCUG | | | | ________.||_|||_||_..|||||||. | | | | ________GGC_UAA_GU_UUACCACGAU | | (miRNA) | 3' | _______U_______A_____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5312-5325 | 0.00166101115909644 | 4 | | | | | | | | | | Position on chromosome: | 1:245871221-245871234 | Conserved species: | panTro2,rheMac2,oryCun2,echTel1 | Binding area: | (Transcript) | 5' | CUAAGACUCCCAUCC____CCUA_____________ | 3' | | | _______________AACC___________GUGCUA | | | | _______________||||___________|||||| | | | | _______________UUGG___________CACGAU | | (miRNA) | 3' | ______________A____CUAAAGUUUAC______ | 5' |
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| | | | | 22 | ENSG00000065970 (FOXJ2) | hsa-miR-29c-3p | 0.999899208145805 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 526-543 | 0.169437653161902 | 10 | | | | | | | | | | Position on chromosome: | 12:8205973-8205990 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AAGAAUUUGGA________A_________ | 3' | | | ___________GGUUUUAA_AUGGUGCUA | | | | ___________|.|||.||_||||||||| | | | | ___________CUAAAGUU_UACCACGAU | | (miRNA) | 3' | __________G__________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1224-1245 | 0.014730463309843 | 0 | | | | | | | | | | Position on chromosome: | 12:8200885;8201293-8200885;8201313 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GGCUUU___UUUCC___U__C_______C | 3' | | | ______GCC_____UUC_GA_UGGUGCU_ | | | | ______.||_____|||_.|_|||||||_ | | | | ______UGG_____AAG_UU_ACCACGA_ | | (miRNA) | 3' | _____U___CUA________U_______U | 5' |
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| | | | | 23 | ENSG00000081842 (PCDHA6) | hsa-miR-29c-3p | 0.999895550012227 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165325233307799 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1200-1226 | 0.0052365579574484 | 0 | | | | | | | | | | Position on chromosome: | 5:140208877-140208903 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CC______AAUUACUACUCGU________ | 3' | | | __UUCAAG_____________UGGUGCUG | | | | __|||||._____________|||||||. | | | | __AAGUUU_____________ACCACGAU | | (miRNA) | 3' | _A___________________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1933-1949 | 0.00359580540691265 | 0 | | | | | | | | | | Position on chromosome: | 5:140209610-140209626 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACUCUCCGCGCC_____CUG____________ | 3' | | | ____________ACCGG___C___UGGUGCUG | | | | ____________||||.___|___|||||||. | | | | ____________UGGCU___G___ACCACGAU | | (miRNA) | 3' | ___________U_____AAA_UUU________ | 5' |
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| | | | | 24 | ENSG00000155893 (ACPL2) | hsa-miR-29c-3p | 0.999894402993158 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1279-1301 | 0.160347304503592 | 8 | | | | | | | | | | Position on chromosome: | 3:141013327-141013349 | Conserved species: | panTro2,rheMac2,rn4,bosTau4,canFam2,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | CAUCUG_______UGAACU__________ | 3' | | | ______UGAUUUC______AAUGGUGCUA | | | | ______.||||||______|||||||||| | | | | ______GCUAAAG______UUACCACGAU | | (miRNA) | 3' | _____G_______U_______________ | 5' |
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| | | | | 25 | ENSG00000204962 (PCDHA8) | hsa-miR-29c-3p | 0.999889488120262 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.164958047360659 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1200-1226 | 0.00499898053487616 | 0 | | | | | | | | | | Position on chromosome: | 5:140222107-140222133 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CC______AAUUACUACUCGU________ | 3' | | | __UUCAAG_____________UGGUGCUG | | | | __|||||._____________|||||||. | | | | __AAGUUU_____________ACCACGAU | | (miRNA) | 3' | _A___________________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00489048342230925 | 0 | | | | | | | | | | Position on chromosome: | 5:140223020-140223044 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____A__C__CCUGC_______C | 3' | | | ___GC_CGGU_UC_AG_____UGGUGCU_ | | | | ___.|_||.|_||_|._____|||||||_ | | | | ___UG_GCUA_AG_UU_____ACCACGA_ | | (miRNA) | 3' | __U_______A__U______________U | 5' |
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| | | | | 26 | ENSG00000239389 (PCDHA13) | hsa-miR-29c-3p | 0.999885702358705 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165325233307799 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1933-1949 | 0.00401774343847904 | 0 | | | | | | | | | | Position on chromosome: | 5:140263787-140263803 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACGCGCCGCACC____CC______________ | 3' | | | ____________ACCG__UUC___UGGUGCUG | | | | ____________||||__|||___|||||||. | | | | ____________UGGC__AAG___ACCACGAU | | (miRNA) | 3' | ___________U____UA___UUU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00752485450649915 | 0 | | | | | | | | | | Position on chromosome: | 5:140263967-140263991 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____GUC___CCUGU_______C | 3' | | | ___GC_CGGU___CAG_____UGGUGCU_ | | | | ___.|_||.|___||._____|||||||_ | | | | ___UG_GCUA___GUU_____ACCACGA_ | | (miRNA) | 3' | __U_______AA____U___________U | 5' |
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| | | | | 27 | ENSG00000268182 (SMIM17) | hsa-miR-29c-3p | 0.999885287097357 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 227-246 | 0.00584067081962033 | 1 | | | | | | | | | | Position on chromosome: | 19:57166809-57166828 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUGUAUACC__G__GAAA___AA______ | 3' | | | _________AC_GA____GAA__GUGCUA | | | | _________||_||____.||__|||||| | | | | _________UG_CU____UUU__CACGAU | | (miRNA) | 3' | ________U__G__AAAG___AC______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 451-467 | 0.153153165065004 | 9 | | | | | | | | | | Position on chromosome: | 19:57167033-57167049 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CUCUAUCUUCAC_UG___GAU____________ | 3' | | | ____________A__UGA_______UGGUGCUA | | | | ____________|__.||_______|||||||| | | | | ____________U__GCU_______ACCACGAU | | (miRNA) | 3' | ___________A_UG___AAAGUUU________ | 5' |
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| | | | | 28 | ENSG00000251664 (PCDHA12) | hsa-miR-29c-3p | 0.999884600948128 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.164842232490081 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1210-1226 | 0.00342204919918066 | 0 | | | | | | | | | | Position on chromosome: | 5:140256268-140256284 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUACAAGAAUU___AC_____U_________ | 3' | | | ____________ACU____UCG__UGGUGCUG | | | | ____________||.____||.__|||||||. | | | | ____________UGG____AGU__ACCACGAU | | (miRNA) | 3' | ___________U___CUAA___UU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1933-1949 | 0.00378608087910078 | 0 | | | | | | | | | | Position on chromosome: | 5:140256991-140257007 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACGCUCCGCGCC____CCUGC___________ | 3' | | | ____________ACCG________UGGUGCUG | | | | ____________||||________|||||||. | | | | ____________UGGC________ACCACGAU | | (miRNA) | 3' | ___________U____UAAAGUUU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2112-2137 | 0.00378647169670936 | 0 | | | | | | | | | | Position on chromosome: | 5:140257170-140257195 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UC__UG____GUC___CCUGC_______C | 3' | | | __UG__CGGU___CAG_____UGGUGCU_ | | | | __|.__||.|___||._____|||||||_ | | | | __AU__GCUA___GUU_____ACCACGA_ | | (miRNA) | 3' | ____UG____AA____U___________U | 5' |
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| | | | | 29 | ENSG00000204969 (PCDHA2) | hsa-miR-29c-3p | 0.999884173650338 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165731846912385 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1200-1226 | 0.00491927052647829 | 0 | | | | | | | | | | Position on chromosome: | 5:140175750-140175776 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CC______AAUUACUACUCGU________ | 3' | | | __UUCAAG_____________UGGUGCUG | | | | __|||||._____________|||||||. | | | | __AAGUUU_____________ACCACGAU | | (miRNA) | 3' | _A___________________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00772058347573443 | 0 | | | | | | | | | | Position on chromosome: | 5:140176663-140176687 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____AUC___CCUGU_______C | 3' | | | ___GC_CGGU___CAG_____UGGUGCU_ | | | | ___.|_||.|___||._____|||||||_ | | | | ___UG_GCUA___GUU_____ACCACGA_ | | (miRNA) | 3' | __U_______AA____U___________U | 5' |
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| | | | | 30 | ENSG00000248383 (PCDHAC1) | hsa-miR-29c-3p | 0.999883063931993 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165112570652476 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUUGAAU________ | 3' | | | __A__UGG_UUCA________UGGUGCUA | | | | __|__.|._||||________|||||||| | | | | __U__GCU_AAGU________ACCACGAU | | (miRNA) | 3' | _A_UG___A____UU______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 283-301 | 0.00520939589537618 | 0 | | | | | | | | | | Position on chromosome: | 5:140306761-140306779 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUGCGUCU_____UA______CC_______C | 3' | | | _________UGACC_____CGA__UGGUGCU_ | | | | _________|.|||_____|.|__|||||||_ | | | | _________AUUGG_____GUU__ACCACGA_ | | (miRNA) | 3' | ______________CUAAA___U________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 591-607 | 0.0066532227055379 | 0 | | | | | | | | | | Position on chromosome: | 5:140307069-140307085 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AACAGCGCGCC___CACCUGC_________U | 3' | | | ___________ACC_________UGGUGCU_ | | | | ___________|||_________|||||||_ | | | | ___________UGG_________ACCACGA_ | | (miRNA) | 3' | __________U___CUAAAGUUU_______U | 5' |
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