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| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000049540 (ELN) | hsa-miR-29a-3p | 0.99999995029443 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 23-44 | 0.167999343906703 | 8 | | | | | | | | | | Position on chromosome: | 7:73483054-73483075 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GACUCAC____UCA____ACGU________ | 3' | | | _______GACC____UCA____UGGUGCUA | | | | _______.|||____|||____|||||||| | | | | _______UUGG____AGU____ACCACGAU | | (miRNA) | 3' | ______A____CUAA___CU__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 279-303 | 0.10797777030968 | 7 | | | | | | | | | | Position on chromosome: | 7:73483310-73483334 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GCCU__AUCUC____GGAACU________ | 3' | | | ____CC_____CAGG______UGGUGCUA | | | | ____||_____|||.______|||||||| | | | | ____GG_____GUCU______ACCACGAU | | (miRNA) | 3' | ___U__CUAAA__________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 292-315 | 0.0267147495236153 | 7 | | | | | | | | | | Position on chromosome: | 7:73483323-73483346 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GGGG___U____GCUA__C_C_______C | 3' | | | ____AAC_UGGU____CA_G_UGGUGCU_ | | | | ____|||_.|.|____||_|_|||||||_ | | | | ____UUG_GCUA____GU_C_ACCACGA_ | | (miRNA) | 3' | ___A________AA______U_______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1619-1644 | 0.0044525403903468 | 0 | | | | | | | | | | Position on chromosome: | 7:73474513;73474706-73474514;73474729 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GCU____GCUG___CUGGGCU________ | 3' | | | ___CCGA____CAG_______UGGUGCUG | | | | ___||||____|||_______|||||||. | | | | ___GGCU____GUC_______ACCACGAU | | (miRNA) | 3' | __U____AAA____U______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1678-1698 | 0.00462607739350164 | 0 | | | | | | | | | | Position on chromosome: | 7:73474763-73474783 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CGGCGUCC____AC__GG__U________ | 3' | | | ________CUGG__UU__AG_UGGUGCUG | | | | ________|.|.__||__||_|||||||. | | | | ________GGCU__AA__UC_ACCACGAU | | (miRNA) | 3' | _______U________AG__U________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1705-1725 | 0.00430499137094057 | 0 | | | | | | | | | | Position on chromosome: | 7:73474790-73474810 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UGGUGUUC____AC__GG__U________ | 3' | | | ________CUGG__UU__AG_UGGUGCUG | | | | ________|.|.__||__||_|||||||. | | | | ________GGCU__AA__UC_ACCACGAU | | (miRNA) | 3' | _______U________AG__U________ | 5' |
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| | | | | 2 | ENSG00000163359 (COL6A3) | hsa-miR-29a-3p | 0.999999803765905 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 589-609 | 0.277980810844018 | 13 | | | | | | | | | | Position on chromosome: | 2:238233244-238233264 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CUGCUGCA_____UA______U_________ | 3' | | | ________UGACC____UCAG_AUGGUGCUA | | | | ________|.|||____||||_||||||||| | | | | ________AUUGG____AGUC_UACCACGAU | | (miRNA) | 3' | _____________CUAA______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 7869-7897 | 0.00850531662588419 | 0 | | | | | | | | | | Position on chromosome: | 2:238289790-238289818 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | _____GGGGA___CUA__CUUU________ | 3' | | | _CCGA_____UUC___AG____UGGUGCUG | | | | _||||_____|||___||____|||||||. | | | | _GGCU_____AAG___UC____ACCACGAU | | (miRNA) | 3' | U____A____________U___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 6696-6722 | 0.00254045907682606 | 0 | | | | | | | | | | Position on chromosome: | 2:238285647-238285673 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AG___G__GUGC_____UUCC________ | 3' | | | __GAU_GA____UUCAG____UGGUGCUG | | | | __.|._||____|||||____|||||||. | | | | __UUG_CU____AAGUC____ACCACGAU | | (miRNA) | 3' | _A___G__A________U___________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2757-2784 | 0.00190649510642159 | 0 | | | | | | | | | | Position on chromosome: | 2:238259812;238261165-238259835;238261168 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | _____GGAAG____GGUGCCGC_______C | 3' | | | _UCGG_____CGGA________UGGUGCU_ | | | | _.||._____|.||________|||||||_ | | | | _GGCU_____GUCU________ACCACGA_ | | (miRNA) | 3' | U____AAA_____________________U | 5' |
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| | | | | 3 | ENSG00000119778 (ATAD2B) | hsa-miR-29a-3p | 0.999999787906699 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 3231-3248 | 0.124355007942724 | 12 | | | | | | | | | | Position on chromosome: | 2:23974765-23974782 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUUCUUUCUCU___UUGAAUU_________ | 3' | | | ___________CUG________UGGUGCUA | | | | ___________|.|________|||||||| | | | | ___________GGC________ACCACGAU | | (miRNA) | 3' | __________U___UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3116-3136 | 0.076645322164541 | 10 | | | | | | | | | | Position on chromosome: | 2:23974650-23974670 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | AACCCCAC___U__________UUU________ | 3' | | | ________AGC_UGG____AGA___UGGUGCUA | | | | ________|.|_.|.____|||___|||||||| | | | | ________UUG_GCU____UCU___ACCACGAU | | (miRNA) | 3' | _______A_______AAAG______________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 385-406 | 0.125258128301133 | 9 | | | | | | | | | | Position on chromosome: | 2:23971919-23971940 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUGAUUA____________CU_________ | 3' | | | _______AGUUGG_UUCAG__AUGGUGCUA | | | | _______|...|._|||||__||||||||| | | | | _______UUGGCU_AAGUC__UACCACGAU | | (miRNA) | 3' | ______A______A________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3986-4013 | 0.016903622993135 | 0 | | | | | | | | | | Position on chromosome: | 2:24111247;24118689-24111269;24118693 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | G___A____AACUUC____CC________ | 3' | | | _GCC_GGUU______UCAG__UGGUGCUA | | | | _.||_|.||______||||__|||||||| | | | | _UGG_CUAA______AGUC__ACCACGAU | | (miRNA) | 3' | U__________________U_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2735-2754 | 0.0289035416989723 | 0 | | | | | | | | | | Position on chromosome: | 2:24056875-24056894 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UAGGGGUGA_____UUG___U_________ | 3' | | | _________AAUUG___UUA__UGGUGCUA | | | | _________||..|___|.|__|||||||| | | | | _________UUGGC___AGU__ACCACGAU | | (miRNA) | 3' | ________A_____UAA___CU________ | 5' |
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| | | | | 4 | ENSG00000105856 (HBP1) | hsa-miR-29a-3p | 0.999998827043691 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 269-289 | 0.160073658296662 | 13 | | | | | | | | | | Position on chromosome: | 7:106842146-106842166 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | GGCUUGAA_______A__CU_________ | 3' | | | ________AAUUGAU_UC__GUGGUGCUA | | | | ________||..|||_||__.|||||||| | | | | ________UUGGCUA_AG__UACCACGAU | | (miRNA) | 3' | _______A_______A__UC_________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 690-718 | 0.073824806272335 | 7 | | | | | | | | | | Position on chromosome: | 7:106842567-106842595 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | ______GAUAUAG___CUGUA_________ | 3' | | | _AUUGG_______UCA_____AUGGUGCUA | | | | _|..|._______|||_____||||||||| | | | | _UGGCU_______AGU_____UACCACGAU | | (miRNA) | 3' | U_____AA________C_____________ | 5' |
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| | | | | 5 | ENSG00000188153 (COL4A5) | hsa-miR-29a-3p | 0.99999736474904 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 97-112 | 0.187471251390466 | 14 | | | | | | | | | | Position on chromosome: | X:107939706-107939721 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,danRer6 | Binding area: | (Transcript) | 5' | CUUUACUACUGCU____________________ | 3' | | | _____________GCCG___UCA_AUGGUGCUA | | | | _____________.|||___|||_||||||||| | | | | _____________UGGC___AGU_UACCACGAU | | (miRNA) | 3' | ____________U____UAA___C_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 374-393 | 0.033197561086291 | 12 | | | | | | | | | | Position on chromosome: | X:107939983-107940002 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGUGGGAAG____AUU_____C_________ | 3' | | | _________AAUU___UUUCA___GGUGCUA | | | | _________||..___|||||___||||||| | | | | _________UUGG___AAAGU___CCACGAU | | (miRNA) | 3' | ________A____CU______CUA_______ | 5' |
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| | | | | 6 | ENSG00000038295 (TLL1) | hsa-miR-29a-3p | 0.999996873653626 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 3764-3786 | 0.217875842229038 | 13 | | | | | | | | | | Position on chromosome: | 4:167023106-167023128 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UUGUUU____AAGAC___UU_________ | 3' | | | ______CUGA_____UUC__AUGGUGCUA | | | | ______|.||_____|||__||||||||| | | | | ______GGCU_____AAG__UACCACGAU | | (miRNA) | 3' | _____U____A_______UC_________ | 5' |
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| | | | | 7 | ENSG00000187498 (COL4A1) | hsa-miR-29a-3p | 0.99999666168171 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1355-1378 | 0.186924020744289 | 13 | | | | | | | | | | Position on chromosome: | 13:110802673-110802696 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GACUC____A__G___CAAC_________ | 3' | | | _____AGCU_AU_UCA____AUGGUGCUA | | | | _____|.|._||_|||____||||||||| | | | | _____UUGG_UA_AGU____UACCACGAU | | (miRNA) | 3' | ____A____C__A___C____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1078-1105 | 0.0298796198635967 | 10 | | | | | | | | | | Position on chromosome: | 13:110802396-110802423 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | G____CCA______AAACCAAAG_______ | 3' | | | _AACU____UCAGA_________GGUGCUA | | | | _|||.____|||||_________||||||| | | | | _UUGG____AGUCU_________CCACGAU | | (miRNA) | 3' | A____CUAA_____A_______________ | 5' |
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| | | | | 8 | ENSG00000187231 (SESTD1) | hsa-miR-29a-3p | 0.999996043988366 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 7895-7922 | 0.176675461432058 | 13 | | | | | | | | | | Position on chromosome: | 2:179974314-179974341 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | C_______AAUA__CUUUGA_________ | 3' | | | _AACUGAU____AG______AUGGUGCUA | | | | _|||.|||____||______||||||||| | | | | _UUGGCUA____UC______UACCACGAU | | (miRNA) | 3' | A_______AAG__________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 6140-6158 | 0.0373534700932766 | 7 | | | | | | | | | | Position on chromosome: | 2:179972559-179972577 | Conserved species: | panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UAUUUAUUUC___________U__________ | 3' | | | __________AGUC___UUCA_GAUGGUGCUA | | | | __________|..|___||||_|||||||||| | | | | __________UUGG___AAGU_CUACCACGAU | | (miRNA) | 3' | _________A____CUA_______________ | 5' |
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| | | | | 9 | ENSG00000183496 (MEX3B) | hsa-miR-29a-3p | 0.999989160289459 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 948-970 | 0.00288999718287342 | 7 | | | | | | | | | | Position on chromosome: | 15:82335076-82335098 | Conserved species: | panTro2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UAAUUA____GA______AUAGUA______ | 3' | | | ______UGAU___AGAUG______GUGCUA | | | | ______.|||___|||||______|||||| | | | | ______GCUA___UCUAC______CACGAU | | (miRNA) | 3' | _____G____AAG_________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 41-59 | 0.194664448198758 | 15 | | | | | | | | | | Position on chromosome: | 15:82334169-82334187 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | AUAAAGGUAA____UA______UA_________ | 3' | | | __________AACU______AG__AUGGUGCUA | | | | __________|||.______||__||||||||| | | | | __________UUGG______UC__UACCACGAU | | (miRNA) | 3' | _________A____CUAAAG_____________ | 5' |
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| | | | | 10 | ENSG00000135473 (PAN2) | hsa-miR-29a-3p | 0.999985409478878 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1246-1262 | 0.183426428173796 | 8 | | | | | | | | | | Position on chromosome: | 12:56711253-56711269 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | CUCAGGGUCUAG___CA____________ | 3' | | | ____________GGU__CAGAUGGUGCUA | | | | ____________|.|__|||||||||||| | | | | ____________CUA__GUCUACCACGAU | | (miRNA) | 3' | ___________G___AA____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 154-174 | 0.00517495735303155 | 4 | | | | | | | | | | Position on chromosome: | 12:56710161-56710181 | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2 | Binding area: | (Transcript) | 5' | AGUUGCUC__AAA__________CC_______ | 3' | | | ________AC___GAU___GGGU__GGUGCUG | | | | ________||___|||___.|.|__||||||. | | | | ________UG___CUA___UCUA__CCACGAU | | (miRNA) | 3' | _______U__G_____AAG_____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 147-162 | 0.00409629924957599 | 4 | | | | | | | | | | Position on chromosome: | 12:56710154-56710169 | Conserved species: | panTro2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ACAAAGAUGGGU_____GCUGC________U | 3' | | | ____________CCGGU_______GGUGCU_ | | | | ____________|||.|_______||||||_ | | | | ____________GGCUA_______CCACGA_ | | (miRNA) | 3' | ___________U_____AAGUCUA______U | 5' |
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| | | | | 11 | ENSG00000017427 (IGF1) | hsa-miR-29a-3p | 0.999980129027684 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 5732-5755 | 0.124186996998096 | 11 | | | | | | | | | | Position on chromosome: | 12:102795377-102795400 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AAACU___UU______UAUA_________ | 3' | | | _____CUG__UUUUAG____AUGGUGCUA | | | | _____|.|__|||.||____||||||||| | | | | _____GGC__AAAGUC____UACCACGAU | | (miRNA) | 3' | ____U___U____________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 2969-2994 | 0.0634621529460551 | 13 | | | | | | | | | | Position on chromosome: | 12:102792614-102792639 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GUU_____A_CU__GC__AU_________ | 3' | | | ___UGGCC_G__AU__CA__GUGGUGCUA | | | | ___|..||_|__||__||__.|||||||| | | | | ___AUUGG_C__UA__GU__UACCACGAU | | (miRNA) | 3' | ______________AA__C__________ | 5' |
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| | | | | 12 | ENSG00000187605 (TET3) | hsa-miR-29a-3p | 0.999960880212891 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 38-58 | 0.0229335655329218 | 9 | | | | | | | | | | Position on chromosome: | 2:74329342-74329362 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GCCUGGC____GCUG__UCU________U | 3' | | | _______CCGA____UC___GUGGUGCU_ | | | | _______||||____||___.|||||||_ | | | | _______GGCU____AG___UACCACGA_ | | (miRNA) | 3' | ______U____AA____UC_________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1053-1075 | 0.00321864046593194 | 2 | | | | | | | | | | Position on chromosome: | 2:74330357-74330379 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | ACCCA_____UGAAAAGC___________C | 3' | | | _____AGCUG________CAG_UGGUGCU_ | | | | _____|.|.|________|||_|||||||_ | | | | _____UUGGC________GUC_ACCACGA_ | | (miRNA) | 3' | ____A_____UAAA_______U_______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1063-1090 | 0.00302180425383364 | 2 | | | | | | | | | | Position on chromosome: | 2:74330367-74330394 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | A____AGU___GC__UGU_C_________ | 3' | | | _AGCC___GGU__UC___G_AUGGUGCUG | | | | _|.||___|.|__||___|_||||||||. | | | | _UUGG___CUA__AG___C_UACCACGAU | | (miRNA) | 3' | A__________A___U_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1087-1107 | 0.00526026063742007 | 11 | | | | | | | | | | Position on chromosome: | 2:74330391-74330411 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UGCAUGGU____UG______GCC________ | 3' | | | ________GCUG____CGGA___UGGUGCUG | | | | ________.|.|____|.||___|||||||. | | | | ________UGGC____GUCU___ACCACGAU | | (miRNA) | 3' | _______U____UAAA_______________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1449-1476 | 0.00934702399885881 | 9 | | | | | | | | | | Position on chromosome: | 2:74330753-74330780 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | ______CUUUGAAA_G___AUG_______U | 3' | | | _CGGUU________U_AGA___UGGUGCU_ | | | | _||.||________|_|||___|||||||_ | | | | _GCUAA________A_UCU___ACCACGA_ | | (miRNA) | 3' | G______________G_____________U | 5' |
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| | | | | | | | | UTR3 | 8mer | 3229-3255 | 0.0216668295772045 | 9 | | | | | | | | | | Position on chromosome: | 2:74332533-74332559 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AG____UUCUCACAAAAUAAC________ | 3' | | | __CAGG_______________UGGUGCUA | | | | __|||._______________|||||||| | | | | __GUCU_______________ACCACGAU | | (miRNA) | 3' | _A___________________________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3786-3814 | 0.0494642419088206 | 10 | | | | | | | | | | Position on chromosome: | 2:74333090-74333118 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | ______AA____UCUAAAUAAA_________ | 3' | | | _AUUGA___UAG__________AUGGUGCUA | | | | _|..||___.||__________||||||||| | | | | _UGGCU___GUC__________UACCACGAU | | (miRNA) | 3' | U_____AAA______________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3837-3861 | 0.00433452595446175 | 9 | | | | | | | | | | Position on chromosome: | 2:74333141-74333165 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | GUCC_____CCUG__UUGCU__________ | 3' | | | ____CUGAU____UC_____GA_GGUGCUA | | | | ____|.|||____||_____||_||||||| | | | | ____GGCUA____AG_____CU_CCACGAU | | (miRNA) | 3' | ___U_____A_____U______A_______ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3931-3947 | 0.00470312494567834 | 7 | | | | | | | | | | Position on chromosome: | 2:74333235-74333251 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UUUUUUUUCCCU__CC____UUU________ | 3' | | | ____________CC____UC___UGGUGCUG | | | | ____________||____||___|||||||. | | | | ____________GG____AG___ACCACGAU | | (miRNA) | 3' | ___________U__CUAA__UCU________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 3953-3970 | 0.000754073008802846 | 5 | | | | | | | | | | Position on chromosome: | 2:74333257-74333274 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | GUGCUGUCUUA____C____ACC_________ | 3' | | | ___________GACC_GUUU______GUGCUA | | | | ___________.|||_.|||______|||||| | | | | ___________UUGG_UAAA______CACGAU | | (miRNA) | 3' | __________A____C____GUCUAC______ | 5' |
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| | | | | | | | | UTR3 | 6mer | 4081-4099 | 0.000861744780138447 | 0 | | | | | | | | | | Position on chromosome: | 2:74333385-74333403 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AGUGGGCCU___U__CU_GG___________U | 3' | | | _________GCC_GG__U__CA___GGUGCU_ | | | | _________.||_|.__|__||___||||||_ | | | | _________UGG_CU__A__GU___CCACGA_ | | (miRNA) | 3' | ________U_________AA__CUA______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 4245-4263 | 0.00465891196256752 | 5 | | | | | | | | | | Position on chromosome: | 2:74333549-74333567 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2 | Binding area: | (Transcript) | 5' | CAGAUUUUCU__UG______CCCAG_______ | 3' | | | __________CC_____CAG_____GGUGCUA | | | | __________||_____|||_____||||||| | | | | __________GG_____GUC_____CCACGAU | | (miRNA) | 3' | _________U__CUAAA___UA__________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 4457-4478 | 0.0556015719317802 | 11 | | | | | | | | | | Position on chromosome: | 2:74333761-74333782 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CCACUGA_____CU______U________ | 3' | | | _______GGCUG__UUUUAG_UGGUGCUA | | | | _______..|.|__|||.||_|||||||| | | | | _______UUGGC__AAAGUC_ACCACGAU | | (miRNA) | 3' | ______A_____U_______U________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 5017-5036 | 0.00242287002891568 | 2 | | | | | | | | | | Position on chromosome: | 2:74334321-74334340 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GGGGGGAG__G___CCCCCUC_______C | 3' | | | ________GG_CGG_______UGGUGCU_ | | | | ________.._||._______|||||||_ | | | | ________UU_GCU_______ACCACGA_ | | (miRNA) | 3' | _______A__G___AAAGUCU_______U | 5' |
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| | | | | | | | | UTR3 | 9mer | 56-72 | 0.0126157367728912 | 0 | | | | | | | | | | Position on chromosome: | 2:74273506-74273522 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CGCCUCAGGGGU____________________ | 3' | | | ____________GCCGG__UCA_AUGGUGCUA | | | | ____________.|||.__|||_||||||||| | | | | ____________UGGCU__AGU_UACCACGAU | | (miRNA) | 3' | ___________U_____AA___C_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3582-3600 | 0.00490150177270769 | 0 | | | | | | | | | | Position on chromosome: | 2:74327903-74327921 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CAGCCUGAGC____CCUAC__________ | 3' | | | __________CCGG_____GGUGGUGCUG | | | | __________|||._____|.|||||||. | | | | __________GGCU_____CUACCACGAU | | (miRNA) | 3' | _________U____AAAGU__________ | 5' |
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| | | | | 13 | ENSG00000162849 (KIF26B) | hsa-miR-29a-3p | 0.9999320151258 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 460-471 | 0.155142295909963 | 14 | | | | | | | | | | Position on chromosome: | 1:245866369-245866380 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | UCAUACUUUCUUGUGUA____________ | 3' | | | _________________CAGAUGGUGCUA | | | | _________________|||||||||||| | | | | _________________GUCUACCACGAU | | (miRNA) | 3' | ________________A____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 782-803 | 0.00254734149121938 | 5 | | | | | | | | | | Position on chromosome: | 1:245866691-245866712 | Conserved species: | panTro2,rheMac2,mm9,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | CCAGAA________GU___GCA______U | 3' | | | ______GGUUGAUU__GGG___GGUGCU_ | | | | ______....||||__.|.___||||||_ | | | | ______UUGGCUAA__UCU___CCACGA_ | | (miRNA) | 3' | _____A________AG___A________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1492-1512 | 0.00340453036924983 | 1 | | | | | | | | | | Position on chromosome: | 1:245867401-245867421 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GGAUUUCC_____AAA__CU_________ | 3' | | | ________CUGAU___AG__GUGGUGCUG | | | | ________|.|||___||__.|||||||. | | | | ________GGCUA___UC__UACCACGAU | | (miRNA) | 3' | _______U_____AAG_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3115-3129 | 0.00416009427946739 | 0 | | | | | | | | | | Position on chromosome: | 1:245869024-245869038 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CUAAGAUCUAAGAA___G______________ | 3' | | | ______________CGG___C_GGUGGUGCUA | | | | ______________||.___|_|.|||||||| | | | | ______________GCU___G_CUACCACGAU | | (miRNA) | 3' | _____________G___AAA_U__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 3155-3175 | 0.000629619185376932 | 1 | | | | | | | | | | Position on chromosome: | 1:245869064-245869084 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | ACUCCACG___C___G__C__________ | 3' | | | ________UCG_AUU_CA_GGUGGUGCUG | | | | ________.||_|||_||_|.|||||||. | | | | ________GGC_UAA_GU_CUACCACGAU | | (miRNA) | 3' | _______U_______A_____________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 5312-5325 | 0.00166101115909644 | 4 | | | | | | | | | | Position on chromosome: | 1:245871221-245871234 | Conserved species: | panTro2,rheMac2,oryCun2,echTel1 | Binding area: | (Transcript) | 5' | CUAAGACUCCCAUCC____CCUA_____________ | 3' | | | _______________AACC___________GUGCUA | | | | _______________||||___________|||||| | | | | _______________UUGG___________CACGAU | | (miRNA) | 3' | ______________A____CUAAAGUCUAC______ | 5' |
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| | | | | 14 | ENSG00000080573 (COL5A3) | hsa-miR-29a-3p | 0.999910417547056 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 791-811 | 0.0236066112943693 | 6 | | | | | | | | | | Position on chromosome: | 19:10071028-10071048 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AGCCCCAG___G__GUG__UU________ | 3' | | | ________AAU_GG___CA__UGGUGCUG | | | | ________||._|.___||__|||||||. | | | | ________UUG_CU___GU__ACCACGAU | | (miRNA) | 3' | _______A___G__AAA__CU________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 687-702 | 0.00250035283088128 | 1 | | | | | | | | | | Position on chromosome: | 19:10070924-10070939 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGUCAUUCCUUCU________CAG________ | 3' | | | _____________CC__UUUC____GGUGCUG | | | | _____________||__||||____||||||. | | | | _____________GG__AAAG____CCACGAU | | (miRNA) | 3' | ____________U__CU____UCUA_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 458-483 | 0.0867683787316888 | 10 | | | | | | | | | | Position on chromosome: | 19:10070695-10070720 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GUC____CCC____CACCUUU________ | 3' | | | ___GCUG___UUCA_______UGGUGCUA | | | | ___.|.|___||||_______|||||||| | | | | ___UGGC___AAGU_______ACCACGAU | | (miRNA) | 3' | __U____UA_____CU_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 180-206 | 0.0582098182368309 | 10 | | | | | | | | | | Position on chromosome: | 19:10070417-10070443 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GG__G___A_____GAUCCUA_________ | 3' | | | __GG_UGA__UCAG_______AUGGUGCUG | | | | __.._.||__||||_______||||||||. | | | | __UU_GCU__AGUC_______UACCACGAU | | (miRNA) | 3' | _A__G___AA____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 4121-4140 | 0.00575545667611511 | 0 | | | | | | | | | | Position on chromosome: | 19:10108819;10112200-10108825;10112212 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GACUCAGUU__A___CU___C__________ | 3' | | | _________CC_GAU__UUC___UGGUGCUG | | | | _________||_|||__|||___|||||||. | | | | _________GG_CUA__AAG___ACCACGAU | | (miRNA) | 3' | ________U___________UCU________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 3366-3385 | 0.00826159753986453 | 0 | | | | | | | | | | Position on chromosome: | 19:10102701-10102720 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCCGGGUG_______AAUU__________C | 3' | | | ________UGACUGG_____GAUGGUGCU_ | | | | ________|.||.|._____|||||||||_ | | | | ________AUUGGCU_____CUACCACGA_ | | (miRNA) | 3' | _______________AAAGU_________U | 5' |
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| | | | | 15 | ENSG00000249158 (PCDHA11) | hsa-miR-29a-3p | 0.999908343392774 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165421972097066 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1210-1223 | 0.00507521667984805 | 0 | | | | | | | | | | Position on chromosome: | 5:140249899-140249912 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUUCAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | 16 | ENSG00000215301 (DDX3X) | hsa-miR-29a-3p | 0.999908279165486 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1483-1507 | 0.162650074667002 | 15 | | | | | | | | | | Position on chromosome: | X:41208456-41208480 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | CAGU_____GG___UUUGUU_________ | 3' | | | ____AUUGA__UCA______AUGGUGCUA | | | | ____|..||__|||______||||||||| | | | | ____UGGCU__AGU______UACCACGAU | | (miRNA) | 3' | ___U_____AA___C______________ | 5' |
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| | | | | 17 | ENSG00000136381 (IREB2) | hsa-miR-29a-3p | 0.999905670392756 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 166-194 | 0.181773142395399 | 11 | | | | | | | | | | Position on chromosome: | 15:78790652-78790680 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | _______UAAAUAAUAUA__A_________ | 3' | | | _UGAUUU___________CG_AUGGUGCUA | | | | _.|||||___________|._||||||||| | | | | _GCUAAA___________GU_UACCACGAU | | (miRNA) | 3' | G___________________C_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 928-948 | 0.00282857981579779 | 1 | | | | | | | | | | Position on chromosome: | 15:78791414-78791434 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AUUAUCC___C______AUAAUACG______C | 3' | | | _______ACC____UCA________GGUGCU_ | | | | _______|||____|||________||||||_ | | | | _______UGG____AGU________CCACGA_ | | (miRNA) | 3' | ______U___CUAA___CUA___________U | 5' |
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| | | | | | | | | UTR3 | 9mer | 1125-1140 | 0.0346519323649021 | 0 | | | | | | | | | | Position on chromosome: | 15:78768632-78768647 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AGCAAACAUGUGU____AAU____________ | 3' | | | _____________CCGG______AUGGUGCUA | | | | _____________|||.______||||||||| | | | | _____________GGCU______UACCACGAU | | (miRNA) | 3' | ____________U____AAAGUC_________ | 5' |
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| | | | | 18 | ENSG00000081842 (PCDHA6) | hsa-miR-29a-3p | 0.999895689486386 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165325233307799 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1213-1226 | 0.00535107384355089 | 0 | | | | | | | | | | Position on chromosome: | 5:140208890-140208903 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUUCAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1933-1949 | 0.00344109497012567 | 0 | | | | | | | | | | Position on chromosome: | 5:140209610-140209626 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACUCUCCGCGCC_________U_C________ | 3' | | | ____________ACCGG___C_G_UGGUGCUG | | | | ____________||||.___|_|_|||||||. | | | | ____________UGGCU___G_C_ACCACGAU | | (miRNA) | 3' | ___________U_____AAA_U_U________ | 5' |
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| | | | | 19 | ENSG00000165671 (NSD1) | hsa-miR-29a-3p | 0.99989555173083 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 453-473 | 0.00735324317045028 | 4 | | | | | | | | | | Position on chromosome: | 5:176722914-176722934 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2 | Binding area: | (Transcript) | 5' | AGCAUUCA__U___C____CCG_______ | 3' | | | ________CG_GUU_UAGG___GGUGCUA | | | | ________||_.||_.||.___||||||| | | | | ________GC_UAA_GUCU___CCACGAU | | (miRNA) | 3' | _______G______A____A_________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 693-715 | 0.0029743404997712 | 3 | | | | | | | | | | Position on chromosome: | 5:176723154-176723176 | Conserved species: | panTro2,rheMac2,echTel1 | Binding area: | (Transcript) | 5' | AGGUCU__UCUA______GCAAG_______ | 3' | | | ______CC_____UAGAU_____GGUGCUG | | | | ______||_____.||||_____||||||. | | | | ______GG_____GUCUA_____CCACGAU | | (miRNA) | 3' | _____U__CUAAA_________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 950-963 | 0.00532009538887807 | 9 | | | | | | | | | | Position on chromosome: | 5:176723411-176723424 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | CCCUAUUUCCCUAA___AC_______________U | 3' | | | ______________AAC_____UCA___GGUGCU_ | | | | ______________|||_____|||___||||||_ | | | | ______________UUG_____AGU___CCACGA_ | | (miRNA) | 3' | _____________A___GCUAA___CUA______U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1298-1320 | 0.0430048761069319 | 11 | | | | | | | | | | Position on chromosome: | 5:176723759-176723781 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CCCAAG______GAAA__U_U________ | 3' | | | ______GGCUGG____UC_G_UGGUGCUA | | | | ______..|.|.____||_|_|||||||| | | | | ______UUGGCU____AG_C_ACCACGAU | | (miRNA) | 3' | _____A______AA____U_U________ | 5' |
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| | | | | | | | | UTR3 | 9mer | 3730-3745 | 0.0972582461203921 | 11 | | | | | | | | | | Position on chromosome: | 5:176726191-176726206 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | ACACACAAUAAAA__UAAU____________ | 3' | | | _____________UG______GAUGGUGCUA | | | | _____________.|______|||||||||| | | | | _____________GC______CUACCACGAU | | (miRNA) | 3' | ____________G__UAAAGU__________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 4397-4422 | 0.00733182779944615 | 2 | | | | | | | | | | Position on chromosome: | 5:176726858-176726883 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GCA__G____C__AUCG____G_______ | 3' | | | ___AG_CGGU_UC____AGGU_GGUGCUA | | | | ___|._||.|_||____||.|_||||||| | | | | ___UU_GCUA_AG____UCUA_CCACGAU | | (miRNA) | 3' | __A__G____A__________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 5107-5130 | 0.00510410693566546 | 0 | | | | | | | | | | Position on chromosome: | 5:176687131-176687154 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CAUG___AU___AAUG____C_______U | 3' | | | ____AGC__GUU____UUAG_UGGUGCU_ | | | | ____|.|__.||____|.||_|||||||_ | | | | ____UUG__UAA____AGUC_ACCACGA_ | | (miRNA) | 3' | ___A___GC___________U_______U | 5' |
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| | | | | 20 | ENSG00000204962 (PCDHA8) | hsa-miR-29a-3p | 0.999890201262023 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.164958047360659 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1213-1226 | 0.00511851456052127 | 0 | | | | | | | | | | Position on chromosome: | 5:140222120-140222133 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUUCAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00457549649288973 | 0 | | | | | | | | | | Position on chromosome: | 5:140223020-140223044 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____AUC___CCUGC_______C | 3' | | | ___GC_CGGU___CAG_____UGGUGCU_ | | | | ___.|_||.|___|||_____|||||||_ | | | | ___UG_GCUA___GUC_____ACCACGA_ | | (miRNA) | 3' | __U_______AA____U___________U | 5' |
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| | | | | 21 | ENSG00000239389 (PCDHA13) | hsa-miR-29a-3p | 0.999887014829286 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165325233307799 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1933-1949 | 0.00401774343847904 | 0 | | | | | | | | | | Position on chromosome: | 5:140263787-140263803 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACGCGCCGCACC____CC______________ | 3' | | | ____________ACCG__UUC___UGGUGCUG | | | | ____________||||__|||___|||||||. | | | | ____________UGGC__AAG___ACCACGAU | | (miRNA) | 3' | ___________U____UA___UCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00717743553744963 | 0 | | | | | | | | | | Position on chromosome: | 5:140263967-140263991 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____GUC___CCUGU_______C | 3' | | | ___GC_CGGU___CAG_____UGGUGCU_ | | | | ___.|_||.|___|||_____|||||||_ | | | | ___UG_GCUA___GUC_____ACCACGA_ | | (miRNA) | 3' | __U_______AA____U___________U | 5' |
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| | | | | 22 | ENSG00000168542 (COL3A1) | hsa-miR-29a-3p | 0.999885402477214 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 221-248 | 0.131009300668059 | 10 | | | | | | | | | | Position on chromosome: | 2:189876722-189876749 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,xenTro2 | Binding area: | (Transcript) | 5' | U__A______AAAUGUCUCA_________ | 3' | | | _CC_AUUUCA__________AUGGUGCUA | | | | _||_||||||__________||||||||| | | | | _GG_UAAAGU__________UACCACGAU | | (miRNA) | 3' | U__C______C__________________ | 5' |
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| | | | | | | | | UTR3 | 6mer | 595-613 | 0.00977350257348131 | 11 | | | | | | | | | | Position on chromosome: | 2:189877096-189877114 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UUGGAUAUC_____C__GUAAA_______C | 3' | | | _________AACUG_UU______GGUGCU_ | | | | _________|||.|_||______||||||_ | | | | _________UUGGC_AA______CCACGA_ | | (miRNA) | 3' | ________A_____U__AGUCUA______U | 5' |
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| | | | | | | | | UTR3 | 9mer | 672-688 | 0.0938860848535765 | 9 | | | | | | | | | | Position on chromosome: | 2:189877173-189877189 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AGGCUUUAAAGA__C__GUU___________ | 3' | | | ____________CG_AU_____AUGGUGCUA | | | | ____________||_||_____||||||||| | | | | ____________GC_UA_____UACCACGAU | | (miRNA) | 3' | ___________G_____AAGUC_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 636-660 | 0.019168069553436 | 0 | | | | | | | | | | Position on chromosome: | 2:189853370;189854122-189853369;189854146 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UUCA____CUC______ACCUCC________ | 3' | | | ____GGCC_____CAGG______UGGUGCUA | | | | ____..||_____|||.______|||||||| | | | | ____UUGG_____GUCU______ACCACGAU | | (miRNA) | 3' | ___A____CUAAA__________________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1020-1047 | 0.0166639194721775 | 0 | | | | | | | | | | Position on chromosome: | 2:189857637-189857664 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | U_____A___CCU___UCCCC________ | 3' | | | _GCCGG_UUC___GGA_____UGGUGCUA | | | | _.|||._|||___.||_____|||||||| | | | | _UGGCU_AAG___UCU_____ACCACGAU | | (miRNA) | 3' | U_____A______________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1109-1136 | 0.00621380692502142 | 0 | | | | | | | | | | Position on chromosome: | 2:189858146-189858173 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ____U__ACC_____GACACGC_______C | 3' | | | _ACC_GG___UCAGG_______UGGUGCU_ | | | | _|||_|.___||||._______|||||||_ | | | | _UGG_CU___AGUCU_______ACCACGA_ | | (miRNA) | 3' | U______AA____________________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1235-1263 | 0.00452512468661827 | 0 | | | | | | | | | | Position on chromosome: | 2:189859001-189859029 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | _____GGUCCUC____ACCAGCC_______ | 3' | | | _CCGG_______CAGG_______GGUGCUA | | | | _|||._______|||._______||||||| | | | | _GGCU_______GUCU_______CCACGAU | | (miRNA) | 3' | U____AAA________A_____________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 1253-1271 | 0.00468727132923462 | 0 | | | | | | | | | | Position on chromosome: | 2:189859019-189859037 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCCAGGACC_______GC___________C | 3' | | | _________AGCCGGU__UA_AUGGUGCU_ | | | | _________|.|||.|__.|_||||||||_ | | | | _________UUGGCUA__GU_UACCACGA_ | | (miRNA) | 3' | ________A_______AA__C________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 1515-1532 | 0.00211803213371263 | 0 | | | | | | | | | | Position on chromosome: | 2:189860424-189860441 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAAGGGUCCU_____AG____C________C | 3' | | | __________GCUGG____AG_GUGGUGCU_ | | | | __________.|.|.____||_.|||||||_ | | | | __________UGGCU____UC_UACCACGA_ | | (miRNA) | 3' | _________U_____AAAG___________U | 5' |
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| | | | | | | | | UTR3 | 8mer | 1741-1766 | 0.0129744016554151 | 0 | | | | | | | | | | Position on chromosome: | 2:189861203;189861891-189861222;189861896 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CC_____CCUAAAGGAAAU_________C | 3' | | | __CCGGU____________GAUGGUGCU_ | | | | __|||.|____________|||||||||_ | | | | __GGCUA____________CUACCACGA_ | | (miRNA) | 3' | _U_____AAGU_________________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 2127-2154 | 0.00242265266381956 | 0 | | | | | | | | | | Position on chromosome: | 2:189864202-189864229 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | U______CC__CU___CCACC________ | 3' | | | _GCUGGU__UC__GGG_____UGGUGCUG | | | | _.|.|.|__||__.|._____|||||||. | | | | _UGGCUA__AG__UCU_____ACCACGAU | | (miRNA) | 3' | U______A_____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2424-2441 | 0.00377753081706779 | 0 | | | | | | | | | | Position on chromosome: | 2:189867057-189867074 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCCAGGACCU_________CC________C | 3' | | | __________GCUGGUUUC___UGGUGCU_ | | | | __________.|.|.||||___|||||||_ | | | | __________UGGCUAAAG___ACCACGA_ | | (miRNA) | 3' | _________U_________UCU_______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 2596-2613 | 0.0022637640973548 | 0 | | | | | | | | | | Position on chromosome: | 2:189868180;189868460-189868190;189868466 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACGUGGCAGUC___________CC________ | 3' | | | ___________CUGGU___GGA__UGGUGCUG | | | | ___________|.|.|___.||__|||||||. | | | | ___________GGCUA___UCU__ACCACGAU | | (miRNA) | 3' | __________U_____AAG_____________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2613-2630 | 0.00232823837739516 | 0 | | | | | | | | | | Position on chromosome: | 2:189868466-189868483 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACCUGGUGCU_____C___CC________C | 3' | | | __________GCUGG_UUC___UGGUGCU_ | | | | __________.|.|._|||___|||||||_ | | | | __________UGGCU_AAG___ACCACGA_ | | (miRNA) | 3' | _________U_____A___UCU_______U | 5' |
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| | | | | | | | | UTR3 | 7mer | 2712-2738 | 0.00223274886971032 | 0 | | | | | | | | | | Position on chromosome: | 2:189868759-189868785 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | C__A___CCUG____UAACAC_______C | 3' | | | _CC_GGU____CGGG______UGGUGCU_ | | | | _||_|.|____|.|.______|||||||_ | | | | _GG_CUA____GUCU______ACCACGA_ | | (miRNA) | 3' | U______AA___________________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 3207-3224 | 0.00330234099352167 | 0 | | | | | | | | | | Position on chromosome: | 2:189871669-189871686 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAGUGGCCCU_____CC__U_C_______C | 3' | | | __________GCUGG___C_G_UGGUGCU_ | | | | __________.|.|.___|_|_|||||||_ | | | | __________UGGCU___G_C_ACCACGA_ | | (miRNA) | 3' | _________U_____AAA_U_U_______U | 5' |
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| | | | | 23 | ENSG00000204969 (PCDHA2) | hsa-miR-29a-3p | 0.999885353532741 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165731846912385 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1213-1226 | 0.00503685407646803 | 0 | | | | | | | | | | Position on chromosome: | 5:140175763-140175776 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUUCAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00729623148897844 | 0 | | | | | | | | | | Position on chromosome: | 5:140176663-140176687 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____AUC___CCUGU_______C | 3' | | | ___GC_CGGU___CAG_____UGGUGCU_ | | | | ___.|_||.|___|||_____|||||||_ | | | | ___UG_GCUA___GUC_____ACCACGA_ | | (miRNA) | 3' | __U_______AA____U___________U | 5' |
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| | | | | 24 | ENSG00000268182 (SMIM17) | hsa-miR-29a-3p | 0.999885006278396 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 227-246 | 0.00580070488003866 | 1 | | | | | | | | | | Position on chromosome: | 19:57166809-57166828 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUGUAUACC__G__GAA____AAA______ | 3' | | | _________AC_GA____AGA___GUGCUA | | | | _________||_||____|||___|||||| | | | | _________UG_CU____UCU___CACGAU | | (miRNA) | 3' | ________U__G__AAAG___AC_______ | 5' |
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| | | | | | | | | UTR3 | 8mer | 451-467 | 0.153153165065004 | 9 | | | | | | | | | | Position on chromosome: | 19:57167033-57167049 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CUCUAUCUUCAC_UG___GAU____________ | 3' | | | ____________A__UGA_______UGGUGCUA | | | | ____________|__.||_______|||||||| | | | | ____________U__GCU_______ACCACGAU | | (miRNA) | 3' | ___________A_UG___AAAGUCU________ | 5' |
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| | | | | 25 | ENSG00000248383 (PCDHAC1) | hsa-miR-29a-3p | 0.999883299139998 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165112570652476 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 283-301 | 0.0053372272605319 | 0 | | | | | | | | | | Position on chromosome: | 5:140306761-140306779 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUGCGUCU_____UA_____ACC_______C | 3' | | | _________UGACC_____CG___UGGUGCU_ | | | | _________|.|||_____|.___|||||||_ | | | | _________AUUGG_____GU___ACCACGA_ | | (miRNA) | 3' | ______________CUAAA__CU________U | 5' |
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| | | | | | | | | UTR3 | 7mer | 591-607 | 0.00646469676075051 | 0 | | | | | | | | | | Position on chromosome: | 5:140307069-140307085 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AACAGCGCGCC___CAC___U_C_______U | 3' | | | ___________ACC_____C_G_UGGUGCU_ | | | | ___________|||_____|_|_|||||||_ | | | | ___________UGG_____G_C_ACCACGA_ | | (miRNA) | 3' | __________U___CUAAA_U_U_______U | 5' |
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| | | | | 26 | ENSG00000204965 (PCDHA5) | hsa-miR-29a-3p | 0.999882426110285 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.165596218416821 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1210-1223 | 0.00513312219061499 | 0 | | | | | | | | | | Position on chromosome: | 5:140202571-140202584 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUUCAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1930-1946 | 0.00416776835686321 | 0 | | | | | | | | | | Position on chromosome: | 5:140203291-140203307 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAGCACCGCGCC____CC______________ | 3' | | | ____________ACCG__UUC___UGGUGCUG | | | | ____________||||__|||___|||||||. | | | | ____________UGGC__AAG___ACCACGAU | | (miRNA) | 3' | ___________U____UA___UCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2109-2134 | 0.00355616174906237 | 0 | | | | | | | | | | Position on chromosome: | 5:140203470-140203495 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UC__UG____GUC___CCUGC_______C | 3' | | | __UG__CGGU___CAG_____UGGUGCU_ | | | | __|.__||.|___|||_____|||||||_ | | | | __AU__GCUA___GUC_____ACCACGA_ | | (miRNA) | 3' | ____UG____AA____U___________U | 5' |
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| | | | | 27 | ENSG00000204967 (PCDHA4) | hsa-miR-29a-3p | 0.999881275557817 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.166022784704862 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1213-1226 | 0.0053197389953519 | 0 | | | | | | | | | | Position on chromosome: | 5:140187986-140187999 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUUCAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2113-2137 | 0.00855416369159001 | 0 | | | | | | | | | | Position on chromosome: | 5:140188886-140188910 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UCU__G____GUC___CCUUU_______C | 3' | | | ___GC_CGGU___CAG_____UGGUGCU_ | | | | ___.|_||.|___|||_____|||||||_ | | | | ___UG_GCUA___GUC_____ACCACGA_ | | (miRNA) | 3' | __U_______AA____U___________U | 5' |
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| | | | | 28 | ENSG00000251664 (PCDHA12) | hsa-miR-29a-3p | 0.99988029772461 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.164842232490081 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1213-1226 | 0.00505092267853851 | 0 | | | | | | | | | | Position on chromosome: | 5:140256271-140256284 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCUACAAGAAUUACU__U__U_______________ | 3' | | | _______________AC_CG________UGGUGCUG | | | | _______________||_||________|||||||. | | | | _______________UG_GC________ACCACGAU | | (miRNA) | 3' | ______________U_____UAAAGUCU________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1933-1949 | 0.00359150613673313 | 0 | | | | | | | | | | Position on chromosome: | 5:140256991-140257007 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACGCUCCGCGCC____C____U_C________ | 3' | | | ____________ACCG____C_G_UGGUGCUG | | | | ____________||||____|_|_|||||||. | | | | ____________UGGC____G_C_ACCACGAU | | (miRNA) | 3' | ___________U____UAAA_U_U________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2112-2137 | 0.00345876865092723 | 0 | | | | | | | | | | Position on chromosome: | 5:140257170-140257195 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UC__UG____GUC___CCUGC_______C | 3' | | | __UG__CGGU___CAG_____UGGUGCU_ | | | | __|.__||.|___|||_____|||||||_ | | | | __AU__GCUA___GUC_____ACCACGA_ | | (miRNA) | 3' | ____UG____AA____U___________U | 5' |
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| | | | | 29 | ENSG00000243232 (PCDHAC2) | hsa-miR-29a-3p | 0.99987822347862 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2335-2361 | 0.16146818627741 | 11 | | | | | | | | | | Position on chromosome: | 5:140391858-140391884 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UC_UG___A____UUUU__AU________ | 3' | | | __A__UGG_UUCA____GA__UGGUGCUA | | | | __|__.|._||||____||__|||||||| | | | | __U__GCU_AAGU____CU__ACCACGAU | | (miRNA) | 3' | _A_UG___A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 613-632 | 0.00301571636507311 | 0 | | | | | | | | | | Position on chromosome: | 5:140346965-140346984 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AGAACAGUA__G__C___G__C________ | 3' | | | _________AA_UG__UU_AG_UGGUGCUG | | | | _________||_.|__||_||_|||||||. | | | | _________UU_GC__AA_UC_ACCACGAU | | (miRNA) | 3' | ________A__G__UA__G__U________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 1083-1099 | 0.00358656334889876 | 0 | | | | | | | | | | Position on chromosome: | 5:140347435-140347451 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UGAAUGACAAU___CCAG____________C | 3' | | | ___________GCC______AGGUGGUGCU_ | | | | ___________.||______||.|||||||_ | | | | ___________UGG______UCUACCACGA_ | | (miRNA) | 3' | __________U___CUAAAG__________U | 5' |
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| | | | | 30 | ENSG00000114270 (COL7A1) | hsa-miR-29a-3p | 0.999877814742569 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 249-270 | 0.0986799609911974 | 9 | | | | | | | | | | Position on chromosome: | 3:48601755-48601776 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GAACCCC____UCCC__CCCU________ | 3' | | | _______ACUG____UC____UGGUGCUA | | | | _______||.|____||____|||||||| | | | | _______UGGC____AG____ACCACGAU | | (miRNA) | 3' | ______U____UAA___UCU_________ | 5' |
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| | | | | | | | | UTR3 | 8mer | 36-57 | 0.0715663836985807 | 8 | | | | | | | | | | Position on chromosome: | 3:48601542-48601563 | Conserved species: | rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UGACCCA____UGU___GA____________ | 3' | | | _______AGCC___GAU__C__AUGGUGCUG | | | | _______|.||___|||__|__||||||||. | | | | _______UUGG___CUA__G__UACCACGAU | | (miRNA) | 3' | ______A__________AA_UC_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 8541-8568 | 0.00336476021098436 | 0 | | | | | | | | | | Position on chromosome: | 3:48631869-48631896 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | U___CAGC____UCGA___GC________ | 3' | | | _CCG____UUUC____AGG__UGGUGCUG | | | | _|||____||||____||.__|||||||. | | | | _GGC____AAAG____UCU__ACCACGAU | | (miRNA) | 3' | U___U________________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 8019-8046 | 0.00406708418448618 | 0 | | | | | | | | | | Position on chromosome: | 3:48630334-48630361 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | C____UC_GC__CACG___CC________ | 3' | | | _GACC__U__UC____AGA__UGGUGCUG | | | | _.|||__|__||____|||__|||||||. | | | | _UUGG__A__AG____UCU__ACCACGAU | | (miRNA) | 3' | A____CU_A____________________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 7081-7101 | 0.0016461254813913 | 0 | | | | | | | | | | Position on chromosome: | 3:48628228-48628248 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCCAGGG______G______CCC_______U | 3' | | | _______GGUUGA___CGGA___UGGUGCU_ | | | | _______....||___|.||___|||||||_ | | | | _______UUGGCU___GUCU___ACCACGA_ | | (miRNA) | 3' | ______A______AAA______________U | 5' |
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| | | | | | | | | UTR3 | 8mer | 3344-3358 | 0.0069209337627997 | 0 | | | | | | | | | | Position on chromosome: | 3:48616381;48616630-48616387;48616637 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CGCUGGGCCCUCUG_____________________ | 3' | | | ______________GGCCGA______AUGGUGCUG | | | | ______________..||||______||||||||. | | | | ______________UUGGCU______UACCACGAU | | (miRNA) | 3' | _____________A______AAAGUC_________ | 5' |
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| | | | | | | | | UTR3 | 7mer | 2489-2506 | 0.00556080024317322 | 0 | | | | | | | | | | Position on chromosome: | 3:48612232-48612249 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | ACAGGGACCCC____AC___AG________ | 3' | | | ___________CUGG__UCA___GGUGCUA | | | | ___________|.|.__|||___||||||| | | | | ___________GGCU__AGU___CCACGAU | | (miRNA) | 3' | __________U____AA___CUA_______ | 5' |
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