DIANA TOOLS - MicroT-CDS

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Results: 584 targets for miRNAs hsa-miR-28-5p

. Threshold is set to 0.7.

Name:	hsa-miR-28-5p
Alternative description:	MIMAT0000085
Related names:
miRNA sequence:	aaggagcucacagucuauugag
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Anemia, Sickle Cell Aortic Valve Stenosis Asthma Brain Neoplasms Breast Neoplasms Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Renal Cell Cardiomyopathy, Hypertrophic Cell Transformation, Neoplastic Chromosome Aberrations Colonic Neoplasms Colorectal Neoplasms Diabetes Mellitus, Type 2 Disease Progression Epstein-Barr Virus Infections Fatty Liver Genetic Predisposition to Disease Glioblastoma Glioma Glomerulosclerosis, Focal Segmental Hematologic Neoplasms Huntington Disease Inflammation Kidney Neoplasms Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myelogenous, Chronic, BCR-ABL Positive Leukemia, Myeloid, Acute Lung Neoplasms Lymphoma, Follicular Lymphoma, Large B-Cell, Diffuse Melanoma Metabolic Syndrome X Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Neuroblastoma Obesity Prostatic Neoplasms Proteinuria Sarcoma Stomach Neoplasms Urinary Bladder Neoplasms Uterine Cervical Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000198315 (ZKSCAN8)

hsa-miR-28-5p

0.992599450338755

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

201-219

0.0220799556516988

Position on chromosome:

6:28121997-28122015

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	GUCUUUGAA__UAU___AUG________G	3'
		_________AG___CUG___GAGCUCCU_
		_________\|\|___\|\|\|___\|\|\|\|\|\|\|\|_
		_________UC___GAC___CUCGAGGA_
(miRNA)	3'	________A__U_____A__________A	5'

UTR3

6mer

818-840

0.00395550146032616

Position on chromosome:

6:28122614-28122636

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	AUACAU___GG______UC___CU______	3'
		______UUU__U_GACU__UGA__CUCCUU
		______.\|.__\|_\|\|\|\|__\|\|\|__\|\|\|\|\|\|
		______GAG__A_CUGA__ACU__GAGGAA
(miRNA)	3'	_________UU_U____C____C_______	5'

UTR3

8mer

2641-2668

0.0166558897316013

Position on chromosome:

6:28124437-28124464

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	A______AAUGGCAUUCAUUA________	3'
		_ACUGUG______________AGCUCCUU
		_\|\|\|\|\|\|______________\|\|\|\|\|\|\|\|
		_UGACAC______________UCGAGGAA
(miRNA)	3'	C____________________________	5'

UTR3

6mer

4142-4162

0.00343114551244751

Position on chromosome:

6:28125938-28125958

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,xenTro2

Binding area:

(Transcript)	5'	UAUUUUAU____U___AUUCUCC______	3'
		________AUUG_UGA_______CUCCUU
		________\|.\|\|_\|\|\|_______\|\|\|\|\|\|
		________UGAC_ACU_______GAGGAA
(miRNA)	3'	_______C________C____________	5'

UTR3

6mer

4598-4611

0.00421370299962331

Position on chromosome:

6:28126394-28126407

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	CAGUCCAGUUUUUAA_____UUU_____________	3'
		_______________UCAGU__________CUCCUU
		_______________\|\|\|.\|__________\|\|\|\|\|\|
		_______________AGUUA__________GAGGAA
(miRNA)	3'	______________G_____UCUGACACUC______	5'

UTR3

6mer

4731-4748

0.00200110925665147

Position on chromosome:

6:28126527-28126544

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCUUGUAUAA__UUU__AA__U______C	3'
		__________AG___CU__GG_GCUCCU_
		__________\|\|___\|\|__\|._\|\|\|\|\|\|_
		__________UC___GA__CU_CGAGGA_
(miRNA)	3'	_________A__U____CA_________A	5'

UTR3

8mer

5327-5340

0.0384337724375396

Position on chromosome:

6:28127123-28127136

Conserved species:

rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUUUCCAAAAUUAA_____A________	3'
		_______________AUUGU_AGCUCCUU
		_______________\|.\|\|\|_\|\|\|\|\|\|\|\|
		_______________UGACA_UCGAGGAA
(miRNA)	3'	______________C_____C________	5'

ENSG00000159140 (SON)

hsa-miR-28-5p

0.990498641418501

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

793-814

0.00393183624906339

Position on chromosome:

21:34930651-34930672

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUCAUGC____UUUUC__AA_UU______	3'
		_______CUUA_____CU__G__CUCCUU
		_______\|\|.\|_____\|\|__\|__\|\|\|\|\|\|
		_______GAGU_____GA__C__GAGGAA
(miRNA)	3'	___________UAUCU__CA_UC______	5'

UTR3

8mer

1011-1035

0.0208483388668285

Position on chromosome:

21:34930869-34930893

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	AUUG____UUUAC__AAUCCA________	3'
		____CUUA_____CU______AGCUCCUU
		____\|\|.\|_____\|\|______\|\|\|\|\|\|\|\|
		____GAGU_____GA______UCGAGGAA
(miRNA)	3'	________UAUCU__CAC___________	5'

UTR3

6mer

1129-1150

0.00249468993581062

Position on chromosome:

21:34930987-34931008

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCACCAC__G_C____A_____CUU______	3'
		_______CU_A_UAGG___UGA___CUCCUU
		_______\|\|_\|_\|\|\|.___\|\|\|___\|\|\|\|\|\|
		_______GA_U_AUCU___ACU___GAGGAA
(miRNA)	3'	_________G_U____GAC___C________	5'

UTR3

8mer

1358-1383

0.0593775491060356

Position on chromosome:

21:34931216-34931241

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUU___UUGUAC________A________	3'
		___CUC______UAGAUUGU_AGCUCCUU
		___\|\|\|______\|\|\|\|.\|\|\|_\|\|\|\|\|\|\|\|
		___GAG______AUCUGACA_UCGAGGAA
(miRNA)	3'	______UU____________C________	5'

ENSG00000215405 (GOLGA6L6)

hsa-miR-28-5p

0.989931225089594

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1025-1039

0.013069920526364

Position on chromosome:

15:20738119-20738133

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAGGGUCCCCACCA___UCCCAU_______	3'
		______________AGG_______CUCCUU
		______________\|\|._______\|\|\|\|\|\|
		______________UCU_______GAGGAA
(miRNA)	3'	_____________A___GACACUC______	5'

UTR3

7mer

716-738

0.0150818211494195

Position on chromosome:

15:20737810-20737832

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGGGG____GAAUCC__AACA_______C	3'
		_____AGGC______GU____AGCUCCU_
		_____\|\|.\|______\|\|____\|\|\|\|\|\|\|_
		_____UCUG______CA____UCGAGGA_
(miRNA)	3'	____A____A_______C__________A	5'

UTR3

8mer

463-481

0.0509829507783589

Position on chromosome:

15:20737557-20737575

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUGUUUUCC______GUCUC________G	3'
		_________AGGCUG_____GAGCUCCU_
		_________\|\|.\|\|\|_____\|\|\|\|\|\|\|\|_
		_________UCUGAC_____CUCGAGGA_
(miRNA)	3'	________A______A____________A	5'

UTR3

6mer

270-288

0.00712307254917057

Position on chromosome:

15:20737364-20737382

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	UUUAACAUUA_________ACCCAC_______	3'
		__________CU__AUGGA_______CUCCUU
		__________\|\|__\|\|.\|\|_______\|\|\|\|\|\|
		__________GA__UAUCU_______GAGGAA
(miRNA)	3'	____________GU_____GACACUC______	5'

UTR3

7mer

1483-1502

0.00470698870489549

Position on chromosome:

15:20741632-20741651

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAAGGAAA__G__GA____CA_________G	3'
		________CU_GA__GGGC____AGCUCCU_
		________\|\|_.\|__.\|.\|____\|\|\|\|\|\|\|_
		________GA_UU__UCUG____UCGAGGA_
(miRNA)	3'	__________G__A_____ACAC_______A	5'

ENSG00000102908 (NFAT5)

hsa-miR-28-5p

0.989403740128247

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

40-66

0.0509383708192336

Position on chromosome:

16:69680956-69680982

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UC___C______G___CUUGC________	3'
		__CUC_AUGGGC_GUG_____AGCUCCUU
		__\|\|\|_\|\|.\|.\|_\|\|\|_____\|\|\|\|\|\|\|\|
		__GAG_UAUCUG_CAC_____UCGAGGAA
(miRNA)	3'	_____U______A________________	5'

UTR3

6mer

120-143

0.0104730383038841

Position on chromosome:

16:69681036-69681059

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AAGG__AUGCA______GA_CU_______C	3'
		____CU_____AGUGGA__G___GCUCCU_
		____\|\|_____\|.\|.\|\|__\|___\|\|\|\|\|\|_
		____GA_____UUAUCU__C___CGAGGA_
(miRNA)	3'	______G__________GA_ACU______A	5'

UTR3

6mer

861-884

0.0030268993918033

Position on chromosome:

16:69689606-69689629

Conserved species:

panTro2,rheMac2,bosTau4,monDom5,xenTro2

Binding area:

(Transcript)	5'	CAGAG___C_____GAAAUACAA______	3'
		_____UAA_UGGAC_________CUCCUU
		_____.\|\|_\|.\|\|\|_________\|\|\|\|\|\|
		_____GUU_AUCUG_________GAGGAA
(miRNA)	3'	____A_________ACACUC_________	5'

UTR3

7mer

4390-4407

0.0067186504735448

Position on chromosome:

16:69729253-69729270

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AACCAAGGGAA___CUU_______________	3'
		___________CAA___GACUG___GCUCCUU
		___________\|\|\|___\|\|\|\|\|___\|\|\|\|\|\|\|
		___________GUU___CUGAC___CGAGGAA
(miRNA)	3'	__________A___AU______ACU_______	5'

UTR3

6mer

8203-8227

0.00170318647421051

Position on chromosome:

16:69734046-69734070

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUC___CC__CCUU__U__UUU______	3'
		____CUC__UG____CU_UG___CUCCUU
		____\|\|\|__\|.____\|\|_\|\|___\|\|\|\|\|\|
		____GAG__AU____GA_AC___GAGGAA
(miRNA)	3'	_______UU__CU____C__UC_______	5'

UTR3

6mer

8230-8250

0.000561219458334731

Position on chromosome:

16:69734073-69734093

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCCUUCC____UUCCUCCCUCC_______	3'
		________CUUA____________CUCCUU
		________\|\|.\|____________\|\|\|\|\|\|
		________GAGU____________GAGGAA
(miRNA)	3'	____________UAUCUGACACUC______	5'

UTR3

8mer

10035-10061

0.00341398447726886

Position on chromosome:

16:69735878-69735904

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	UG_____UUU_C__CUAUUCC________	3'
		__UUAAU___G_CU_______AGCUCCUU
		__\|.\|\|\|___\|_\|\|_______\|\|\|\|\|\|\|\|
		__AGUUA___C_GA_______UCGAGGAA
(miRNA)	3'	_G_____U___U__CAC____________	5'

UTR3

6mer

11533-11554

0.00262527684005941

Position on chromosome:

16:69737376-69737397

Conserved species:

panTro2,rheMac2,rn4,oryCun2

Binding area:

(Transcript)	5'	AGAUUGA____UUUCAUUUUAAU______	3'
		_______UUCA____________CUCCUU
		_______.\|\|\|____________\|\|\|\|\|\|
		_______GAGU____________GAGGAA
(miRNA)	3'	___________UAUCUGACACUC______	5'

UTR3

6mer

11884-11905

0.00539113711724624

Position on chromosome:

16:69737727-69737748

Conserved species:

panTro2,rheMac2,mm9,oryCun2

Binding area:

(Transcript)	5'	UAUUUGA___CCAC______AAUAA______	3'
		_______CUC______UUGU_____CUCCUU
		_______\|\|\|______.\|\|\|_____\|\|\|\|\|\|
		_______GAG______GACA_____GAGGAA
(miRNA)	3'	__________UUAUCU____CUC________	5'

ENSG00000273079 (GRIN2B)

hsa-miR-28-5p

0.97946441759039

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

22443-22469

0.0151545483942881

Position on chromosome:

12:13715608-13715634

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	GG____A_______UUCCCAUUU_______	3'
		__GGUG_ACU_UGG_________GCUCCUU
		__..\|._\|\|\|_\|\|._________\|\|\|\|\|\|\|
		__UUAU_UGA_ACU_________CGAGGAA
(miRNA)	3'	_G____C___C___________________	5'

UTR3

6mer

22359-22383

0.00490671354982874

Position on chromosome:

12:13715524-13715548

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUG____CCAGCACCAUCUCUC______	3'
		____GUGA_______________CUCCUU
		____\|\|\|\|_______________\|\|\|\|\|\|
		____CACU_______________GAGGAA
(miRNA)	3'	___A____C____________________	5'

UTR3

6mer

22342-22354

0.00322382377441628

Position on chromosome:

12:13715507-13715519

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCUCUCCUCCUUUUCA____U_______________	3'
		________________CAGU___CU_____CUCCUU
		________________\|\|.\|___\|\|_____\|\|\|\|\|\|
		________________GUUA___GA_____GAGGAA
(miRNA)	3'	_______________A____UCU__CACUC______	5'

UTR3

9mer

22216-22238

0.00918091772425846

Position on chromosome:

12:13715381-13715403

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGCUUC___C____UG__GAA_________	3'
		______CUC__UGG__UG___GAGCUCCUU
		______\|\|\|__\|.\|__\|\|___\|\|\|\|\|\|\|\|\|
		______GAG__AUC__AC___CUCGAGGAA
(miRNA)	3'	_________UU___UG__A___________	5'

UTR3

6mer

20570-20595

0.00225343634644893

Position on chromosome:

12:13713735-13713760

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	CUU_____C__UCCCCAACCCUC______	3'
		___GACUG_UG____________CUCCUU
		___\|\|\|\|\|_\|\|____________\|\|\|\|\|\|
		___CUGAC_AC____________GAGGAA
(miRNA)	3'	__U________UC________________	5'

UTR3

6mer

17583-17602

0.00148401647855876

Position on chromosome:

12:13710748-13710767

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CCUAAUUUA__U____AAUCUCA______	3'
		_________CA_UAGG_______CUCCUU
		_________\|\|_\|\|\|._______\|\|\|\|\|\|
		_________GU_AUCU_______GAGGAA
(miRNA)	3'	________A__U____GACACUC______	5'

UTR3

6mer

15375-15393

0.00192031872149655

Position on chromosome:

12:13708540-13708558

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CCAUCCUUU___CCAACCAAGU________C	3'
		_________CUC____________GCUCCU_
		_________\|\|\|____________\|\|\|\|\|\|_
		_________GAG____________CGAGGA_
(miRNA)	3'	____________UUAUCUGACACU______A	5'

UTR3

6mer

14911-14929

0.00188630549102122

Position on chromosome:

12:13708076-13708094

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUGGUUCCUG___UUCCU___UAU________	3'
		__________CUC______CU_____CUCCUU
		__________\|\|\|______\|\|_____\|\|\|\|\|\|
		__________GAG______GA_____GAGGAA
(miRNA)	3'	_____________UUAUCU__CACUC______	5'

UTR3

6mer

14865-14887

0.00084160217512236

Position on chromosome:

12:13708030-13708052

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUAUAU__G__CUU___CCUCUU______	3'
		______CU_AG___GAC______CUCCUU
		______\|\|_\|.___\|\|\|______\|\|\|\|\|\|
		______GA_UU___CUG______GAGGAA
(miRNA)	3'	________G__AU____ACACUC______	5'

UTR3

6mer

14655-14671

0.00226279759929037

Position on chromosome:

12:13707820-13707836

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAACCAACAUAA___CCA____UC_________	3'
		____________UCA____ACU_____CUCCUU
		____________\|\|\|____\|\|\|_____\|\|\|\|\|\|
		____________AGU____UGA_____GAGGAA
(miRNA)	3'	___________G___UAUC___CACUC______	5'

UTR3

6mer

14198-14203

0.00197295833899497

Position on chromosome:

12:13707363-13707368

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUGUUCCCUUUGUCCAAAAUACU______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

13087-13103

0.00192361805160583

Position on chromosome:

12:13706252-13706268

Conserved species:

panTro2,canFam2

Binding area:

(Transcript)	5'	AGAGAAUGCUAG__UC__A___A__________	3'
		____________UC__UA_ACU_____CUCCUU
		____________\|\|__\|\|_\|\|\|_____\|\|\|\|\|\|
		____________AG__AU_UGA_____GAGGAA
(miRNA)	3'	___________G__UU__C___CACUC______	5'

UTR3

6mer

12496-12513

0.00199897107836855

Position on chromosome:

12:13705661-13705678

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	CCUAUGGGGU__A_____C__U_________G	3'
		__________CU_GAUAG_CU____GCUCCU_
		__________\|\|_.\|\|\|\|_\|\|____\|\|\|\|\|\|_
		__________GA_UUAUC_GA____CGAGGA_
(miRNA)	3'	____________G_____U__CACU______A	5'

UTR3

6mer

11786-11798

0.00123839240110198

Position on chromosome:

12:13704951-13704963

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUGCGAAUUUGUUGA____CCU______C	3'
		_______________GCUG___GCUCCU_
		_______________.\|\|\|___\|\|\|\|\|\|_
		_______________UGAC___CGAGGA_
(miRNA)	3'	______________C____ACU______A	5'

UTR3

8mer

10100-10114

0.00411082509672255

Position on chromosome:

12:13703265-13703279

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCCCAUGUAAAG____AC_________G	3'
		_____________AGGC__UGAGCUCCU_
		_____________\|\|.\|__\|\|\|\|\|\|\|\|\|_
		_____________UCUG__ACUCGAGGA_
(miRNA)	3'	____________A____AC_________A	5'

UTR3

6mer

10069-10095

0.000555245640477579

Position on chromosome:

12:13703234-13703260

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	AG________C___CCUC__CUCCC______	3'
		__UUC__UAG_CUG____UG_____CUCCUU
		__.\|\|__\|\|\|_\|\|\|____\|\|_____\|\|\|\|\|\|
		__GAG__AUC_GAC____AC_____GAGGAA
(miRNA)	3'	_____UU___U_________UC_________	5'

UTR3

6mer

9926-9931

0.00223672714062885

Position on chromosome:

12:13703091-13703096

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2

Binding area:

(Transcript)	5'	CCAUAACCACUUCUCCAAAUAAC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

7359-7386

0.00226065810812511

Position on chromosome:

12:13700524-13700551

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U___C______CAAUUAU___UUU______	3'
		_CUC__UAGGC_______UGU___CUCCUU
		_\|\|\|__\|\|\|.\|_______\|\|\|___\|\|\|\|\|\|
		_GAG__AUCUG_______ACA___GAGGAA
(miRNA)	3'	____UU_______________CUC______	5'

UTR3

8mer

7003-7030

0.00823505487108395

Position on chromosome:

12:13700168-13700195

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	A___UUG___ACAACCUUCCA________	3'
		_UCG___AGA___________AGCUCCUU
		_\|\|.___\|\|\|___________\|\|\|\|\|\|\|\|
		_AGU___UCU___________UCGAGGAA
(miRNA)	3'	G___UA____GACAC______________	5'

UTR3

6mer

2037-2042

0.0014910326976695

Position on chromosome:

12:13695202-13695207

Conserved species:

canFam2

Binding area:

(Transcript)	5'	AUUAUUUGUUCUUACUUACCUUA______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1158-1175

0.0012477718423804

Position on chromosome:

12:13694323-13694340

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUUUACCCUGC_____AU____CCC________	3'
		___________CUCAG____CU_____CUCCUU
		___________\|\|\|\|.____\|\|_____\|\|\|\|\|\|
		___________GAGUU____GA_____GAGGAA
(miRNA)	3'	________________AUCU__CACUC______	5'

UTR3

6mer

567-588

0.00348690458826706

Position on chromosome:

12:13693732-13693753

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CACACUC___CC____GCCG_CU______	3'
		_______CUC__UGGG____G__CUCCUU
		_______\|\|\|__\|.\|.____\|__\|\|\|\|\|\|
		_______GAG__AUCU____C__GAGGAA
(miRNA)	3'	__________UU____GACA_UC______	5'

ENSG00000162897 (FCAMR)

hsa-miR-28-5p

0.97800865745413

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2128-2154

0.0026392029567316

Position on chromosome:

1:207139216-207139242

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UG_____CCCC___A___CCCAU______	3'
		__GAUGG____CUG_UGA_____CUCCUU
		__.\|\|.\|____\|\|\|_\|\|\|_____\|\|\|\|\|\|
		__UUAUC____GAC_ACU_____GAGGAA
(miRNA)	3'	_G_____U__________C__________	5'

UTR3

9mer

1977-2002

0.00655063779277015

Position on chromosome:

1:207139065-207139090

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCC___UGCU___G_GAGGA_________	3'
		___CUC____GGC_G_____GAGCUCCUU
		___\|\|\|____\|.\|_\|_____\|\|\|\|\|\|\|\|\|
		___GAG____CUG_C_____CUCGAGGAA
(miRNA)	3'	______UUAU___A_A_____________	5'

UTR3

6mer

788-806

0.00200613540759994

Position on chromosome:

1:207133100-207133118

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAAAGCAG___UC_____CC_________G	3'
		_________CUC___GGAC__UG_GCUCCU_
		_________\|\|\|___.\|\|\|__\|\|_\|\|\|\|\|\|_
		_________GAG___UCUG__AC_CGAGGA_
(miRNA)	3'	____________UUA____AC__U______A	5'

UTR3

7mer

183-208

0.00664690201627678

Position on chromosome:

1:207131493-207131518

Conserved species:

panTro2

Binding area:

(Transcript)	5'	ACA___CC___CCCUU____G_________	3'
		___CUC___AG_____GCUG_GGGCUCCUU
		___\|\|\|___\|\|_____.\|\|\|_\|.\|\|\|\|\|\|\|
		___GAG___UC_____UGAC_CUCGAGGAA
(miRNA)	3'	______UUA___________A_________	5'

UTR3

8mer

92-114

0.0548860591647632

Position on chromosome:

1:207131402-207131424

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	UGCCUU___A________CUA________	3'
		______CUC_AGUAGAUU___AGCUCCUU
		______\|\|\|_\|.\|\|\|\|.\|___\|\|\|\|\|\|\|\|
		______GAG_UUAUCUGA___UCGAGGAA
(miRNA)	3'	__________________CAC________	5'

ENSG00000171475 (WIPF2)

hsa-miR-28-5p

0.977551435278682

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

72-94

0.0629616739661663

Position on chromosome:

17:38434550-38434572

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUCCC__G__AC_____CAUGA________A	3'
		_____CU_AA____CUG_____GAGCUCCU_
		_____\|\|_\|\|____\|\|\|_____\|\|\|\|\|\|\|\|_
		_____GA_UU____GAC_____CUCGAGGA_
(miRNA)	3'	_______G__AUCU___A____________A	5'

UTR3

6mer

329-357

0.00295178401679618

Position on chromosome:

17:38434807-38434835

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	_____GGC___G______AAUGGUA______	3'
		_UUAG___AGG_UG_GAG_______CUCCUU
		_\|.\|.___\|\|._\|\|_\|\|\|_______\|\|\|\|\|\|
		_AGUU___UCU_AC_CUC_______GAGGAA
(miRNA)	3'	G____A_____G__A________________	5'

UTR3

6mer

2419-2446

0.00230479798746935

Position on chromosome:

17:38436897-38436924

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	A_______UG_UUUUUUUUUUUUC______	3'
		_UCAA_AG__U_____________CUCCUU
		_\|\|\|\|_\|\|__\|_____________\|\|\|\|\|\|
		_AGUU_UC__A_____________GAGGAA
(miRNA)	3'	G____A__UG_CACUC______________	5'

UTR3

6mer

5600-5621

0.00494016933701441

Position on chromosome:

17:38440078-38440099

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUAAAAA_____CC____AUUCU_______	3'
		_______UUCAA__AGAC______CUCCUU
		_______.\|\|\|\|__\|\|\|\|______\|\|\|\|\|\|
		_______GAGUU__UCUG______GAGGAA
(miRNA)	3'	____________A_____ACACUC______	5'

UTR3

7mer

497-522

0.00693923800469394

Position on chromosome:

17:38420926-38420951

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AG____AC____A__AAGCAC_______C	3'
		__CAGU__GGGC_UG______AGCUCCU_
		__\|\|.\|__.\|.\|_\|\|______\|\|\|\|\|\|\|_
		__GUUA__UCUG_AC______UCGAGGA_
(miRNA)	3'	_A_____________AC___________A	5'

UTR3

7mer

956-974

0.00873836862076064

Position on chromosome:

17:38421385;38430042-38421398;38430046

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AGACCCUCC____C___GA_C________C	3'
		_________CAGU_GGG__G__AGCUCCU_
		_________\|\|.\|_.\|.__\|__\|\|\|\|\|\|\|_
		_________GUUA_UCU__C__UCGAGGA_
(miRNA)	3'	________A________GA_AC_______A	5'

ENSG00000168014 (C2CD3)

hsa-miR-28-5p

0.974792027348976

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1856-1882

0.0508960332158961

Position on chromosome:

11:73748531-73748557

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AG___CC___UG_UGCAA__C________	3'
		__UAA__UGG__U_____GU_AGCUCCUU
		__.\|\|__\|.\|__\|_____\|\|_\|\|\|\|\|\|\|\|
		__GUU__AUC__A_____CA_UCGAGGAA
(miRNA)	3'	_A________UG________C________	5'

UTR3

7mer

578-602

0.00357543963766613

Position on chromosome:

11:73724341-73724365

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUUG___G____ACCAG__CU________	3'
		____CAG_AGGC_____GU__GGCUCCUU
		____\|\|._\|\|.\|_____\|\|__.\|\|\|\|\|\|\|
		____GUU_UCUG_____CA__UCGAGGAA
(miRNA)	3'	___A___A____A______C_________	5'

UTR3

8mer

451-472

0.015972484778996

Position on chromosome:

11:73724214-73724235

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUGUCCA___GCC___AUUUC________	3'
		_______CUU___AGA_____AGCUCCUU
		_______\|\|.___\|\|\|_____\|\|\|\|\|\|\|\|
		_______GAG___UCU_____UCGAGGAA
(miRNA)	3'	__________UUA___GACAC________	5'

ENSG00000148735 (PLEKHS1)

hsa-miR-28-5p

0.972561391698025

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

392-418

0.0028234835632326

Position on chromosome:

10:115540933-115540959

Conserved species:

panTro2,xenTro2

Binding area:

(Transcript)	5'	AG__G_UC_____UCCCA__CAC______	3'
		__CU_A__AGGCU_____GA___CUCCUU
		__\|\|_\|__\|\|.\|\|_____\|\|___\|\|\|\|\|\|
		__GA_U__UCUGA_____CU___GAGGAA
(miRNA)	3'	____G_UA_____CA_____C________	5'

UTR3

6mer

413-433

0.0021721856376507

Position on chromosome:

10:115540954-115540974

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCAGACAC___CUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

428-447

0.00229601447383516

Position on chromosome:

10:115540969-115540988

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCCAAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

469-474

0.00249033509429937

Position on chromosome:

10:115541010-115541015

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUCCCCAACAUCCUUCCCAACAC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

469-488

0.00237421054874405

Position on chromosome:

10:115541010-115541029

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCCCAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

483-503

0.0031229159318538

Position on chromosome:

10:115541024-115541044

Conserved species:

panTro2,rheMac2,fr2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

498-518

0.00269629216289504

Position on chromosome:

10:115541039-115541059

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAAACAC___CUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

513-532

0.00254044499575682

Position on chromosome:

10:115541054-115541073

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCCAAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

527-547

0.00249092994826626

Position on chromosome:

10:115541068-115541088

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

557-577

0.00244626354356965

Position on chromosome:

10:115541098-115541118

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAAACAC___UUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

572-592

0.00172202813859256

Position on chromosome:

10:115541113-115541133

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCAAACAC___CUUCCC____AC__________	3'
		________CUC______AGAC______CUCCUU
		________\|\|\|______\|\|\|\|______\|\|\|\|\|\|
		________GAG______UCUG______GAGGAA
(miRNA)	3'	___________UUA_______ACACUC______	5'

UTR3

6mer

587-606

0.00241322329070454

Position on chromosome:

10:115541128-115541147

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCCAGACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

601-620

0.00203495615865458

Position on chromosome:

10:115541142-115541161

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCCCAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

630-650

0.00200328361839261

Position on chromosome:

10:115541171-115541191

Conserved species:

danRer6

Binding area:

(Transcript)	5'	CCAAACCC___UUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

645-665

0.00219630293903351

Position on chromosome:

10:115541186-115541206

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAAACAC___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

660-679

0.00155513821022928

Position on chromosome:

10:115541201-115541220

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCCAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

696-701

0.00211289608440698

Position on chromosome:

10:115541237-115541242

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUCCUUCCCCCUUCCCCAACAC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

696-716

0.00178236355760821

Position on chromosome:

10:115541237-115541257

Conserved species:

tetNig2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

711-730

0.00200507312116524

Position on chromosome:

10:115541252-115541271

Conserved species:

panTro2,tetNig2

Binding area:

(Transcript)	5'	CCCCAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

725-745

0.00175027553490513

Position on chromosome:

10:115541266-115541286

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCAAACCC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

767-772

0.0017409630143116

Position on chromosome:

10:115541308-115541313

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUCCCCAACAUCCUUCCCAACAC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

767-786

0.00188341951144527

Position on chromosome:

10:115541308-115541327

Conserved species:

panTro2,tetNig2

Binding area:

(Transcript)	5'	UCCCAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

781-801

0.0018873361638595

Position on chromosome:

10:115541322-115541342

Conserved species:

panTro2,tetNig2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

796-816

0.00183730945549912

Position on chromosome:

10:115541337-115541357

Conserved species:

rheMac2,tetNig2

Binding area:

(Transcript)	5'	CCAAACAC___CUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

811-830

0.00148977042693132

Position on chromosome:

10:115541352-115541371

Conserved species:

tetNig2

Binding area:

(Transcript)	5'	CCCAAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

825-845

0.00149188633892156

Position on chromosome:

10:115541366-115541386

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

855-875

0.00168977101127816

Position on chromosome:

10:115541396-115541416

Conserved species:

panTro2,tetNig2

Binding area:

(Transcript)	5'	CCAAACAC___UUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

870-890

0.00115489038488489

Position on chromosome:

10:115541411-115541431

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CCAAACAC___CUUCCC____AC__________	3'
		________CUC______AGAC______CUCCUU
		________\|\|\|______\|\|\|\|______\|\|\|\|\|\|
		________GAG______UCUG______GAGGAA
(miRNA)	3'	___________UUA_______ACACUC______	5'

UTR3

6mer

913-918

0.00158868694494947

Position on chromosome:

10:115541454-115541459

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCCCAACACCGCCUUCCCAACAC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

928-948

0.00152068412659632

Position on chromosome:

10:115541469-115541489

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAAACCC___UUUCCCAAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

943-963

0.00104787702281361

Position on chromosome:

10:115541484-115541504

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCAAACAC___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

958-978

0.00138379885461255

Position on chromosome:

10:115541499-115541519

Conserved species:

panTro2,xenTro2

Binding area:

(Transcript)	5'	CCCAACAC___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

973-992

0.00132208639642839

Position on chromosome:

10:115541514-115541533

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCCCAACAC___CUUCCCAACAC________	3'
		_________CUC_____________CUCCUU
		_________\|\|\|_____________\|\|\|\|\|\|
		_________GAG_____________GAGGAA
(miRNA)	3'	____________UUAUCUGACACUC______	5'

UTR3

6mer

1009-1014

0.00128265574486934

Position on chromosome:

10:115541550-115541555

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUCCUUCCCCCUUCCCCAACAA______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1009-1029

0.000956780428303139

Position on chromosome:

10:115541550-115541570

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCAACAA___CUUCCCCAACAC_______	3'
		________CUC_____________CUCCUU
		________\|\|\|_____________\|\|\|\|\|\|
		________GAG_____________GAGGAA
(miRNA)	3'	___________UUAUCUGACACUC______	5'

UTR3

6mer

1858-1880

0.00171416621153295

Position on chromosome:

10:115542399-115542421

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCCG____CUCU___UCCUCCU______G	3'
		_____CUCA_____CU_______GCUCCU_
		_____\|\|\|\|_____\|\|_______\|\|\|\|\|\|_
		_____GAGU_____GA_______CGAGGA_
(miRNA)	3'	_________UAUCU__CACU_________A	5'

ENSG00000108381 (ASPA)

hsa-miR-28-5p

0.968324760999079

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

40-62

0.0436854656137061

Position on chromosome:

17:3402423-3402445

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	UACAAA___UGC___U____A________	3'
		______UUC___UAG_CUGU_AGCUCCUU
		______.\|\|___\|\|\|_\|\|\|\|_\|\|\|\|\|\|\|\|
		______GAG___AUC_GACA_UCGAGGAA
(miRNA)	3'	_________UU____U____C________	5'

UTR3

7mer

83-104

0.0164273874032677

Position on chromosome:

17:3402466-3402487

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	GCCUUA____________CAUACAU_______A	3'
		______UUCA____ACUG_______AGCUCCU_
		______.\|\|\|____\|\|\|\|_______\|\|\|\|\|\|\|_
		______GAGU____UGAC_______UCGAGGA_
(miRNA)	3'	__________UAUC____AC____________A	5'

UTR3

6mer

434-455

0.00356359549119293

Position on chromosome:

17:3402817-3402838

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUGUUUC___C__CA____CUCA______	3'
		_______CAA_AG__UGUG____CUCCUU
		_______\|\|\|_\|\|__\|\|\|\|____\|\|\|\|\|\|
		_______GUU_UC__ACAC____GAGGAA
(miRNA)	3'	______A___A__UG____UC________	5'

UTR3

6mer

3611-3633

0.00292616496002175

Position on chromosome:

17:3405994-3406016

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	ACUGAC_________GCA____AAC______	3'
		______CUC_AUGGA____GAG___CUCCUU
		______\|\|\|_\|\|.\|\|____\|\|\|___\|\|\|\|\|\|
		______GAG_UAUCU____CUC___GAGGAA
(miRNA)	3'	_________U_____GACA____________	5'

ENSG00000186432 (KPNA4)

hsa-miR-28-5p

0.966039082168852

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

6338-6343

0.00238872116753288

Position on chromosome:

3:160219121-160219126

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUUCUGUUUCCCCCUUUCCCAC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1059-1079

0.00142370552190904

Position on chromosome:

3:160213842-160213862

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCCUGAC_____AU___CCACC_______	3'
		________CUCAG__GAU______CUCCUU
		________\|\|\|\|.__\|\|.______\|\|\|\|\|\|
		________GAGUU__CUG______GAGGAA
(miRNA)	3'	_____________AU___ACACUC______	5'

UTR3

6mer

280-298

0.00604673982269132

Position on chromosome:

3:160213063-160213081

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	UCCUUGAAUA__________AUUUA_______	3'
		__________UUC__UAGAU______CUCCUU
		__________.\|\|__\|\|\|\|.______\|\|\|\|\|\|
		__________GAG__AUCUG______GAGGAA
(miRNA)	3'	_____________UU_____ACACUC______	5'

UTR3

8mer

103-122

0.055566055720115

Position on chromosome:

3:160212886-160212905

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	CUUUCUUUC__C________A________	3'
		_________CA_UAGAUUGU_AGCUCCUU
		_________\|\|_\|\|\|\|.\|\|\|_\|\|\|\|\|\|\|\|
		_________GU_AUCUGACA_UCGAGGAA
(miRNA)	3'	________A__U________C________	5'

ENSG00000121101 (TEX14)

hsa-miR-28-5p

0.965641070132404

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4441-4465

0.00491634507998003

Position on chromosome:

17:56707888-56707912

Conserved species:

panTro2,bosTau4,xenTro2

Binding area:

(Transcript)	5'	GGAA____UGUU___GCA__UAA______	3'
		____UUUA____GAU___GU___CUCCUU
		____.\|.\|____\|\|.___\|\|___\|\|\|\|\|\|
		____GAGU____CUG___CA___GAGGAA
(miRNA)	3'	________UAU____A____CUC______	5'

UTR3

7mer

3567-3580

0.0182205482201941

Position on chromosome:

17:56688586-56688599

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GGGUUUAUCCACCG___C_______C_________A	3'
		______________CUC______CU___AGCUCCU_
		______________\|\|\|______\|\|___\|\|\|\|\|\|\|_
		______________GAG______GA___UCGAGGA_
(miRNA)	3'	_________________UUAUCU__CAC_______A	5'

UTR3

7mer

2895-2915

0.00222879759205113

Position on chromosome:

17:56676914-56676934

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	CAGGGAGA_____AAUCA________________	3'
		________CUCAG_____AGAU_____GCUCCUU
		________\|\|\|\|._____\|\|\|._____\|\|\|\|\|\|\|
		________GAGUU_____UCUG_____CGAGGAA
(miRNA)	3'	_____________A________ACACU_______	5'

UTR3

6mer

1842-1868

0.00315192932815803

Position on chromosome:

17:56663387-56663413

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AG__AC______AGCUCACAGUAC______	3'
		__CU___UGGAC____________CUCCUU
		__\|\|___\|.\|\|\|____________\|\|\|\|\|\|
		__GA___AUCUG____________GAGGAA
(miRNA)	3'	____GUU_____ACACUC____________	5'

UTR3

6mer

1009-1031

0.00322528603550443

Position on chromosome:

17:56649321-56649343

Conserved species:

panTro2,rheMac2,rn4,loxAfr3

Binding area:

(Transcript)	5'	AGAGAG_______AA______UUCU______	3'
		______CAA_AGA__CUG_GA____CUCCUU
		______\|\|\|_\|\|\|__\|\|\|_\|\|____\|\|\|\|\|\|
		______GUU_UCU__GAC_CU____GAGGAA
(miRNA)	3'	_____A___A________A__C_________	5'

UTR3

8mer

269-294

0.0334851482361454

Position on chromosome:

17:56634310-56634335

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	AGU__G____UCCU______A________	3'
		___UU_AGUG____GGUUGU_AGCUCCUU
		___.\|_\|.\|.____\|..\|\|\|_\|\|\|\|\|\|\|\|
		___GA_UUAU____CUGACA_UCGAGGAA
(miRNA)	3'	_____G______________C________	5'

ENSG00000215883 (CYB5RL)

hsa-miR-28-5p

0.965404309432164

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2677-2696

0.0523785854338411

Position on chromosome:

1:54645012;54645657-54645025;54645662

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUAGGUUU_______AUG__________C	3'
		________AUAGGUU___GUGAGCUCCU_
		________\|\|\|\|..\|___\|\|\|\|\|\|\|\|\|\|_
		________UAUCUGA___CACUCGAGGA_
(miRNA)	3'	_______U____________________A	5'

UTR3

8mer

2477-2495

0.00928230862599711

Position on chromosome:

1:54640486;54644822-54640495;54644830

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUUUGUA_____CC___A___________C	3'
		_________CUCAG__AGG____GAGCUCCU_
		_________\|\|\|\|.__\|\|.____\|\|\|\|\|\|\|\|_
		_________GAGUU__UCU____CUCGAGGA_
(miRNA)	3'	______________A____GACA________A	5'

UTR3

6mer

689-712

0.00345091592891058

Position on chromosome:

1:54638698-54638721

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAAA____CA____CAAAGAAA______	3'
		_____AGAC__GUGG________CUCCUU
		_____\|\|\|\|__\|\|\|.________\|\|\|\|\|\|
		_____UCUG__CACU________GAGGAA
(miRNA)	3'	____A____A_____C_____________	5'

ENSG00000080546 (SESN1)

hsa-miR-28-5p

0.965177277605374

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

192-214

0.0650010603259986

Position on chromosome:

6:109307832-109307854

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCCCCA___UAA________C________	3'
		______CUU___AGGCUGUG_AGCUCCUU
		______\|\|.___\|\|.\|\|\|\|\|_\|\|\|\|\|\|\|\|
		______GAG___UCUGACAC_UCGAGGAA
(miRNA)	3'	_________UUA_________________	5'

ENSG00000197013 (ZNF429)

hsa-miR-28-5p

0.964546337751558

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

250-269

0.0136450953904537

Position on chromosome:

19:21738120-21738139

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGUAAGCCC__G_CUG________________	3'
		_________CU_A___GGGCUGU___CUCCUU
		_________\|\|_\|___.\|.\|\|\|\|___\|\|\|\|\|\|
		_________GA_U___UCUGACA___GAGGAA
(miRNA)	3'	___________G_UA________CUC______	5'

UTR3

8mer

811-838

0.0510517982033454

Position on chromosome:

19:21738681-21738708

Conserved species:

panTro2

Binding area:

(Transcript)	5'	G__G__GG___GA_GUCCCCC________	3'
		_CU_GG__AGG__G_______AGCUCCUU
		_\|\|_..__\|\|.__\|_______\|\|\|\|\|\|\|\|
		_GA_UU__UCU__C_______UCGAGGAA
(miRNA)	3'	___G__A____GA_AC_____________	5'

ENSG00000134825 (TMEM258)

hsa-miR-28-5p

0.963146072183938

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

192-216

0.0581116443410581

Position on chromosome:

11:61557343-61557367

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,tetNig2,fr2

Binding area:

(Transcript)	5'	ACA____UGAUAU__AUAAA________C	3'
		___CUCG______CU_____GAGCUCCU_
		___\|\|\|.______\|\|_____\|\|\|\|\|\|\|\|_
		___GAGU______GA_____CUCGAGGA_
(miRNA)	3'	_______UAUCU___CA___________A	5'

UTR3

6mer

183-200

0.00592841145295798

Position on chromosome:

11:61557334-61557351

Conserved species:

panTro2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GAUAUCUAUAA___G__CCUCAU______	3'
		___________AGA_CU______CUCCUU
		___________\|\|\|_\|\|______\|\|\|\|\|\|
		___________UCU_GA______GAGGAA
(miRNA)	3'	__________A______CACUC_______	5'

ENSG00000174579 (MSL2)

hsa-miR-28-5p

0.960664376318533

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2133-2152

0.0500644328513286

Position on chromosome:

3:135869897-135869916

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCUGUUGG_____C______CCG________G	3'
		________UUUAA____UUG___GAGCUCCU_
		________.\|.\|\|____.\|\|___\|\|\|\|\|\|\|\|_
		________GAGUU____GAC___CUCGAGGA_
(miRNA)	3'	_____________AUCU___A__________A	5'

UTR3

6mer

1545-1565

0.00327212042813601

Position on chromosome:

3:135869309-135869329

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UCUAGGGA___AAUUCUAAAUCC______	3'
		________AGA____________CUCCUU
		________\|\|\|____________\|\|\|\|\|\|
		________UCU____________GAGGAA
(miRNA)	3'	_______A___GACACUC___________	5'

UTR3

6mer

1277-1298

0.00425661689390831

Position on chromosome:

3:135869041-135869062

Conserved species:

panTro2,rn4,mm9,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	CCACAG__UU__UU___AAUAU______A	3'
		______UC__UA__UUG_____GCUCCU_
		______\|\|__\|\|__.\|\|_____\|\|\|\|\|\|_
		______AG__AU__GAC_____CGAGGA_
(miRNA)	3'	_____G__UU__CU___ACU________A	5'

UTR3

6mer

764-790

0.00533961011021279

Position on chromosome:

3:135868528-135868554

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UU_____ACA___CAGAUGACAC______	3'
		__UGGAC___GAG__________CUCCUU
		__\|.\|\|\|___\|\|\|__________\|\|\|\|\|\|
		__AUCUG___CUC__________GAGGAA
(miRNA)	3'	_U_____ACA___________________	5'

ENSG00000123411 (IKZF4)

hsa-miR-28-5p

0.960028176937324

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

321-339

0.00455257008800886

Position on chromosome:

12:56429437-56429455

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCCCCCACC_____________CCACAA______	3'
		__________CUC______CUGU______CUCCUU
		__________\|\|\|______\|\|\|\|______\|\|\|\|\|\|
		__________GAG______GACA______GAGGAA
(miRNA)	3'	_____________UUAUCU____CUC_________	5'

UTR3

7mer

388-401

0.0175314240361045

Position on chromosome:

12:56429504-56429517

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CCAGCAGCCCCAGG______A___________C	3'
		______________GGUAGG_____AGCUCCU_
		______________..\|\|\|._____\|\|\|\|\|\|\|_
		______________UUAUCU_____UCGAGGA_
(miRNA)	3'	_____________G______GACAC_______A	5'

UTR3

6mer

758-779

0.00205515969249416

Position on chromosome:

12:56429874-56429895

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGAUGU______U___GUCCCU______	3'
		_______GAUAGA_CUG______CUCCUU
		_______.\|\|\|\|\|_\|\|\|______\|\|\|\|\|\|
		_______UUAUCU_GAC______GAGGAA
(miRNA)	3'	______G__________ACUC________	5'

UTR3

6mer

822-848

0.00324156771039721

Position on chromosome:

12:56429938-56429964

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GU__AUUA____GU____UUUCU______	3'
		__CU____AGUG__GGCU_____CUCCUU
		__\|\|____\|.\|.__\|.\|\|_____\|\|\|\|\|\|
		__GA____UUAU__CUGA_____GAGGAA
(miRNA)	3'	____G_____________CACUC______	5'

UTR3

7mer

1017-1041

0.00257627642884278

Position on chromosome:

12:56430133-56430157

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UGAC___CC______CUCAG_________	3'
		____CUU__UAGGCU_____GGGCUCCUU
		____\|\|.__\|\|\|.\|\|_____\|.\|\|\|\|\|\|\|
		____GAG__AUCUGA_____CUCGAGGAA
(miRNA)	3'	_______UU______CA____________	5'

UTR3

6mer

1621-1644

0.00177277087692374

Position on chromosome:

12:56430737-56430760

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGUAA___U____UCCUU__CUCU_______	3'
		_____CUC__UGG_____CU_____CUCCUU
		_____\|\|\|__\|.\|_____\|\|_____\|\|\|\|\|\|
		_____GAG__AUC_____GA_____GAGGAA
(miRNA)	3'	________UU___U______CACUC______	5'

UTR3

6mer

1858-1875

0.00182357679823336

Position on chromosome:

12:56430974-56430991

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAAAAAACUUU___CU______U__UC______	3'
		___________CUC______CU_UG__CUCCUU
		___________\|\|\|______\|\|_\|\|__\|\|\|\|\|\|
		___________GAG______GA_AC__GAGGAA
(miRNA)	3'	______________UUAUCU__C__UC______	5'

UTR3

6mer

1926-1952

0.00120233496926055

Position on chromosome:

12:56431042-56431068

Conserved species:

panTro2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GA__C________GCAAUUGUUC______	3'
		__AG_AUUGUGGG__________CUCCUU
		__\|\|_\|.\|\|\|\|.\|__________\|\|\|\|\|\|
		__UC_UGACACUC__________GAGGAA
(miRNA)	3'	_A___________________________	5'

UTR3

8mer

2051-2070

0.00776314039925366

Position on chromosome:

12:56431167-56431186

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCAACGGCA_CC____G__CU________	3'
		_________C__UGGG_UG__AGCUCCUU
		_________\|__\|.\|._\|\|__\|\|\|\|\|\|\|\|
		_________G__AUCU_AC__UCGAGGAA
(miRNA)	3'	________A_UU____G__AC________	5'

UTR3

8mer

2476-2498

0.0122827991507734

Position on chromosome:

12:56431592-56431614

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,monDom5

Binding area:

(Transcript)	5'	AACAUC____UGCUCU__CCC________	3'
		______CUCA______CU___AGCUCCUU
		______\|\|\|\|______\|\|___\|\|\|\|\|\|\|\|
		______GAGU______GA___UCGAGGAA
(miRNA)	3'	__________UAUCU___CAC________	5'

UTR3

6mer

2924-2943

0.00785810686242367

Position on chromosome:

12:56432040-56432059

Conserved species:

panTro2,rn4,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CCCCCCUUU_________G_UUUU_______	3'
		_________UUUAA_AGA_U_____CUCCUU
		_________.\|.\|\|_\|\|\|_\|_____\|\|\|\|\|\|
		_________GAGUU_UCU_A_____GAGGAA
(miRNA)	3'	______________A___G_CACUC______	5'

ENSG00000184313 (MROH7)

hsa-miR-28-5p

0.959694645872608

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

724-740

0.0212429477095369

Position on chromosome:

1:55145651-55145667

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CUGCCCGUCUCC___CU_________________	3'
		____________CUC____GGCU___AGCUCCUU
		____________\|\|\|____\|.\|\|___\|\|\|\|\|\|\|\|
		____________GAG____CUGA___UCGAGGAA
(miRNA)	3'	_______________UUAU____CAC________	5'

UTR3

8mer

796-817

0.025269526833602

Position on chromosome:

1:55151935-55151956

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGGCAG_____C__C____GC________G	3'
		______C_CAG_GG_CUGU__GAGCUCCU_
		______\|_\|\|._.\|_\|\|\|\|__\|\|\|\|\|\|\|\|_
		______G_GUU_UC_GACA__CUCGAGGA_
(miRNA)	3'	_______A___A__U______________A	5'

UTR3

6mer

859-871

0.00307048503067884

Position on chromosome:

1:55151998-55152010

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UGAGGCGCAUCUACC_____________________G	3'
		_______________CUCA____GCU____GCUCCU_
		_______________\|\|\|\|____.\|\|____\|\|\|\|\|\|_
		_______________GAGU____UGA____CGAGGA_
(miRNA)	3'	___________________UAUC___CACU______A	5'

UTR3

6mer

906-932

0.000951035357461881

Position on chromosome:

1:55152045-55152071

Conserved species:

panTro2,rn4,mm9

Binding area:

(Transcript)	5'	C_____CCUGCCU_____C_U_______C	3'
		_CUCAA_______GGCUG_G_GGCUCCU_
		_\|\|\|\|\|_______\|.\|\|\|_\|_.\|\|\|\|\|\|_
		_GAGUU_______CUGAC_C_UCGAGGA_
(miRNA)	3'	______AU__________A_________A	5'

UTR3

6mer

1170-1183

0.00218184684929975

Position on chromosome:

1:55161098-55161111

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	GCAUCCUCUACCUG____UCCC_____________G	3'
		______________CUCA___________GCUCCU_
		______________\|\|\|\|___________\|\|\|\|\|\|_
		______________GAGU___________CGAGGA_
(miRNA)	3'	__________________UAUCUGACACU______A	5'

UTR3

6mer

1551-1569

0.00198757890484297

Position on chromosome:

1:55167766-55167784

Conserved species:

panTro2,canFam2,dasNov2

Binding area:

(Transcript)	5'	AGCGACGCA__AG____C___C______C	3'
		_________CG__AGGU_GUG_GCUCCU_
		_________\|.__\|\|.._\|\|\|_\|\|\|\|\|\|_
		_________GU__UCUG_CAC_CGAGGA_
(miRNA)	3'	________A__UA____A___U______A	5'

UTR3

6mer

2177-2187

0.00781481654376644

Position on chromosome:

1:55175803-55175813

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	CUGCCCACUUCCCACCA__G___C______G	3'
		_________________GC___G_GCUCCU_
		_________________.\|___\|_\|\|\|\|\|\|_
		_________________UG___C_CGAGGA_
(miRNA)	3'	________________C__ACA_U______A	5'

ENSG00000164778 (EN2)

hsa-miR-28-5p

0.954723476815042

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

399-423

0.0432493729956223

Position on chromosome:

7:155255782-155255806

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	ACA______AACCGAAUAAAU_______A	3'
		___ACUGUG____________AGCUCCU_
		___\|\|\|\|\|\|____________\|\|\|\|\|\|\|_
		___UGACAC____________UCGAGGA_
(miRNA)	3'	__C_________________________A	5'

UTR3

6mer

708-721

0.00302943881194553

Position on chromosome:

7:155256091-155256104

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACCCUCCUGCACCUA___CCCUC______	3'
		_______________ACU_____CUCCUU
		_______________\|\|\|_____\|\|\|\|\|\|
		_______________UGA_____GAGGAA
(miRNA)	3'	______________C___CACUC______	5'

UTR3

6mer

709-727

0.00180058520341444

Position on chromosome:

7:155256092-155256110

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUGCACCUAA___CCUC____CCUU_______	3'
		__________CUC______CU_____CUCCUU
		__________\|\|\|______\|\|_____\|\|\|\|\|\|
		__________GAG______GA_____GAGGAA
(miRNA)	3'	_____________UUAUCU__CACUC______	5'

UTR3

6mer

741-746

0.00161843130343306

Position on chromosome:

7:155256124-155256129

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCUUCUCCUUUUUCCUCCUCUUC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

735-753

0.00142631593107011

Position on chromosome:

7:155256118-155256136

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUUUUUCCUC___UUC_____CCUUC______	3'
		__________CUC______CU_____CUCCUU
		__________\|\|\|______\|\|_____\|\|\|\|\|\|
		__________GAG______GA_____GAGGAA
(miRNA)	3'	_____________UUAUCU__CACUC______	5'

UTR3

6mer

748-765

0.00169883803008752

Position on chromosome:

7:155256131-155256148

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCCUCCUUC___CUUC____CCU_______C	3'
		__________CUC______CU____GCUCCU_
		__________\|\|\|______\|\|____\|\|\|\|\|\|_
		__________GAG______GA____CGAGGA_
(miRNA)	3'	_____________UUAUCU__CACU______A	5'

UTR3

6mer

748-769

0.00187571605669475

Position on chromosome:

7:155256131-155256152

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCCUUC___CUUCCUC___CUC_______	3'
		_______CUC_______CUG____CUCCUU
		_______\|\|\|_______\|\|\|____\|\|\|\|\|\|
		_______GAG_______GAC____GAGGAA
(miRNA)	3'	__________UUAUCU____ACUC______	5'

UTR3

6mer

795-800

0.00160090522435227

Position on chromosome:

7:155256178-155256183

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUCUUCUUUUUCUUCUCCUCCUC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

795-817

0.00156282026926636

Position on chromosome:

7:155256178-155256200

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCCUC___CUUCCUUCCUCCUC______	3'
		______CUC______________CUCCUU
		______\|\|\|______________\|\|\|\|\|\|
		______GAG______________GAGGAA
(miRNA)	3'	_________UUAUCUGACACUC_______	5'

UTR3

6mer

1006-1032

0.00267006041718221

Position on chromosome:

7:155256389-155256415

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	AG_C___G__CG______GCGACC______	3'
		__C_CAA_AG___GUGGG______CUCCUU
		__\|_\|\|\|_\|\|___\|\|\|.\|______\|\|\|\|\|\|
		__G_GUU_UC___CACUC______GAGGAA
(miRNA)	3'	___A___A__UGA_________________	5'

ENSG00000165895 (ARHGAP42)

hsa-miR-28-5p

0.954326787515477

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

129-150

0.0554974509269798

Position on chromosome:

11:100859662-100859683

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUUCA_____C_____A__U________	3'
		_______C_CAG_AGACU_UG_AGCUCCUU
		_______\|_\|\|._\|\|\|\|\|_\|\|_\|\|\|\|\|\|\|\|
		_______G_GUU_UCUGA_AC_UCGAGGAA
(miRNA)	3'	________A___A_____C___________	5'

UTR3

6mer

2927-2945

0.00488566746260643

Position on chromosome:

11:100862460-100862478

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	ACGAAGUAUG___AA_____UUU______	3'
		__________AGG__GUGGG___CUCCUU
		__________\|\|.__\|\|\|.\|___\|\|\|\|\|\|
		__________UCU__CACUC___GAGGAA
(miRNA)	3'	_________A___GA______________	5'

ENSG00000215717 (TMEM167B)

hsa-miR-28-5p

0.954076871066444

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

267-293

0.00492234483977402

Position on chromosome:

1:109637389-109637415

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CC______GAUA_____ACAUAC______	3'
		__CUCGGU____AGAUU______CUCCUU
		__\|\|\|..\|____\|\|\|.\|______\|\|\|\|\|\|
		__GAGUUA____UCUGA______GAGGAA
(miRNA)	3'	_________________CACUC_______	5'

UTR3

7mer

306-331

0.0085138830768916

Position on chromosome:

1:109637428-109637453

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UG___UCC__UU____UCUUC_______C	3'
		__UCA___UG__UUGU_____AGCUCCU_
		__\|\|\|___\|.__.\|\|\|_____\|\|\|\|\|\|\|_
		__AGU___AU__GACA_____UCGAGGA_
(miRNA)	3'	_G___U____CU____C___________A	5'

UTR3

8mer

2335-2359

0.0468534221357157

Position on chromosome:

1:109639457-109639481

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGGC_AG______AUGAA__C________	3'
		____C__GGUGGA_____GU_AGCUCCUU
		____\|__..\|.\|\|_____\|\|_\|\|\|\|\|\|\|\|
		____G__UUAUCU_____CA_UCGAGGAA
(miRNA)	3'	_____AG______GA_____C________	5'

ENSG00000116580 (GON4L)

hsa-miR-28-5p

0.953953139435041

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

613-635

0.0200284992301461

Position on chromosome:

1:155720121-155720143

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AUAGCA________G__GAGUUC________	3'
		______UCG__AGA_UG______AGCUCCUU
		______\|\|.__\|\|\|_\|\|______\|\|\|\|\|\|\|\|
		______AGU__UCU_AC______UCGAGGAA
(miRNA)	3'	_____G___UA___G__AC____________	5'

UTR3

8mer

496-515

0.0128746218171571

Position on chromosome:

1:155720004-155720023

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUAGCUAG__CCGC___AU_________C	3'
		________UC____GAC__UGAGCUCCU_
		________\|\|____\|\|\|__\|\|\|\|\|\|\|\|\|_
		________AG____CUG__ACUCGAGGA_
(miRNA)	3'	_______G__UUAU___AC_________A	5'

UTR3

8mer

439-452

0.0138986429590701

Position on chromosome:

1:155719947-155719960

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAGCUGUUUUUAUUG____________________	3'
		_______________CAA___ACU___AGCUCCUU
		_______________\|\|\|___\|\|\|___\|\|\|\|\|\|\|\|
		_______________GUU___UGA___UCGAGGAA
(miRNA)	3'	______________A___AUC___CAC________	5'

UTR3

7mer

365-387

0.0131083703677566

Position on chromosome:

1:155719873-155719895

Conserved species:

panTro2,rheMac2,rn4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	UAGCA__G__CC_____U__U_______G	3'
		_____CU_GG__AGGCU_UG_AGCUCCU_
		_____\|\|_..__\|\|.\|\|_\|\|_\|\|\|\|\|\|\|_
		_____GA_UU__UCUGA_AC_UCGAGGA_
(miRNA)	3'	_______G__A______C__________A	5'

UTR3

8mer

4092-4112

0.0126482126293052

Position on chromosome:

1:155740873-155740893

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAAGAAC_____CAU__ACA_________G	3'
		_______CUCAA___GA____GAGCUCCU_
		_______\|\|\|\|\|___\|\|____\|\|\|\|\|\|\|\|_
		_______GAGUU___CU____CUCGAGGA_
(miRNA)	3'	____________AU___GACA________A	5'

UTR3

7mer

1444-1469

0.00272975142951794

Position on chromosome:

1:155727089-155727114

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AG__________ACAGA____GC_______C	3'
		__CUCA__AGAC_____UGUG__AGCUCCU_
		__\|\|\|\|__\|\|\|\|_____\|\|\|\|__\|\|\|\|\|\|\|_
		__GAGU__UCUG_____ACAC__UCGAGGA_
(miRNA)	3'	______UA______________________A	5'

ENSG00000083168 (KAT6A)

hsa-miR-28-5p

0.952213387974246

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2190-2213

0.0312105019996365

Position on chromosome:

8:41789187-41789210

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGGGA__UGG___ACAACCCA________	3'
		_____CA___AGA________AGCUCCUU
		_____\|\|___\|\|\|________\|\|\|\|\|\|\|\|
		_____GU___UCU________UCGAGGAA
(miRNA)	3'	____A__UA____GACAC___________	5'

UTR3

6mer

2120-2144

0.00536085908038586

Position on chromosome:

8:41789117-41789141

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAAA_____GCAGGAAAAUGCUU______	3'
		____GUGAG______________CUCCUU
		____\|\|\|\|\|______________\|\|\|\|\|\|
		____CACUC______________GAGGAA
(miRNA)	3'	___A_________________________	5'

UTR3

6mer

1077-1100

0.00449101244893758

Position on chromosome:

8:41788074-41788097

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAUAU____A__CAUUAAAUUCU______	3'
		_____CUGU_AG___________CUCCUU
		_____\|\|\|\|_\|\|___________\|\|\|\|\|\|
		_____GACA_UC___________GAGGAA
(miRNA)	3'	____U____C___________________	5'

UTR3

6mer

124-144

0.00707542201421658

Position on chromosome:

8:41787121-41787141

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUGUAU___UCCA______CAC_C______G	3'
		_______CUC_______UGU___G_GCUCCU_
		_______\|\|\|_______\|\|\|___\|_\|\|\|\|\|\|_
		_______GAG_______ACA___C_CGAGGA_
(miRNA)	3'	__________UUAUCUG_______U______A	5'

UTR3

6mer

96-120

0.0109451443703267

Position on chromosome:

8:41787093-41787117

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UGGG_____CC___CUCCCUUCCU______	3'
		____C_CAG__GGC__________CUCCUU
		____\|_\|\|.__\|.\|__________\|\|\|\|\|\|
		____G_GUU__CUG__________GAGGAA
(miRNA)	3'	_____A___AU___ACACUC__________	5'

UTR3

7mer

5213-5236

0.00845141595443936

Position on chromosome:

8:41839380-41839403

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGCA_______UG_AAAACA__C_______G	3'
		____UCG__AG__U______UG_AGCUCCU_
		____\|\|.__\|\|__\|______\|\|_\|\|\|\|\|\|\|_
		____AGU__UC__A______AC_UCGAGGA_
(miRNA)	3'	___G___UA__UG_C_______________A	5'

UTR3

7mer

3330-3356

0.00472596863773864

Position on chromosome:

8:41798714-41798740

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	G___UUGGAAG_______CUUC_______C	3'
		_CUC_______AGAC_GU____AGCUCCU_
		_\|\|\|_______\|\|\|\|_\|\|____\|\|\|\|\|\|\|_
		_GAG_______UCUG_CA____UCGAGGA_
(miRNA)	3'	____UUA________A__C__________A	5'

UTR3

7mer

870-888

0.00691198933308468

Position on chromosome:

8:41790593-41790611

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAUGAAUAA____UUCACCCC_______A	3'
		_________CAGU________AGCUCCU_
		_________\|\|.\|________\|\|\|\|\|\|\|_
		_________GUUA________UCGAGGA_
(miRNA)	3'	________A____UCUGACAC_______A	5'

ENSG00000103043 (VAC14)

hsa-miR-28-5p

0.947691930301083

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2366-2392

0.0368848724805463

Position on chromosome:

16:70818695-70818721

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,danRer6

Binding area:

(Transcript)	5'	C_____UGAAAAGC__AUC_________A	3'
		_CAAUG________GG___UGAGCUCCU_
		_\|\|\|\|.________\|.___\|\|\|\|\|\|\|\|\|_
		_GUUAU________CU___ACUCGAGGA_
(miRNA)	3'	A_______________GAC_________A	5'

UTR3

6mer

1281-1304

0.00285609098983866

Position on chromosome:

16:70765504-70765527

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UGGUA___________UAGAA__UU______	3'
		_____C_CAA_AGGCU_____UG__CUCCUU
		_____\|_\|\|\|_\|\|.\|\|_____\|\|__\|\|\|\|\|\|
		_____G_GUU_UCUGA_____AC__GAGGAA
(miRNA)	3'	______A___A_____C______UC______	5'

UTR3

7mer

1202-1224

0.0027055961018078

Position on chromosome:

16:70765425-70765447

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	AGAGA_____C__CGA__G___A_______G	3'
		_____UUCAG_AG___AC___G_AGCUCCU_
		_____.\|\|\|._\|\|___\|\|___\|_\|\|\|\|\|\|\|_
		_____GAGUU_UC___UG___C_UCGAGGA_
(miRNA)	3'	__________A_______ACA_________A	5'

UTR3

6mer

963-984

0.00331553138119722

Position on chromosome:

16:70731124-70731145

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1,galGal3,tetNig2

Binding area:

(Transcript)	5'	AACCUG___UGCU_C____ACC______G	3'
		______UUC____G_CUGU___GCUCCU_
		______.\|\|____\|_\|\|\|\|___\|\|\|\|\|\|_
		______GAG____C_GACA___CGAGGA_
(miRNA)	3'	_________UUAU_U____CU_______A	5'

UTR3

6mer

725-747

0.00177447497720842

Position on chromosome:

16:70726799-70726821

Conserved species:

panTro2,rheMac2,xenTro2

Binding area:

(Transcript)	5'	AGGCC___UAC__C___CUCAU______G	3'
		_____CUC___GG_CUG_____GCUCCU_
		_____\|\|\|___.\|_\|\|\|_____\|\|\|\|\|\|_
		_____GAG___UC_GAC_____CGAGGA_
(miRNA)	3'	________UUA__U___ACU________A	5'

UTR3

7mer

325-350

0.0105156540663194

Position on chromosome:

16:70721669-70721694

Conserved species:

panTro2,rheMac2,mm9

Binding area:

(Transcript)	5'	GG______C__UGUCUGCCCA_______C	3'
		__AGGCUG_UG__________AGCUCCU_
		__\|\|.\|\|\|_\|\|__________\|\|\|\|\|\|\|_
		__UCUGAC_AC__________UCGAGGA_
(miRNA)	3'	_A__________________________A	5'

ENSG00000138430 (OLA1)

hsa-miR-28-5p

0.947007531328166

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

2633-2659

0.0246565409180199

Position on chromosome:

2:174939808-174939834

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GA____GA____AA_____CUU_______	3'
		__CAGU__GGAC__UGUGG___GCUCCUU
		__\|\|.\|__.\|\|\|__\|\|\|\|.___\|\|\|\|\|\|\|
		__GUUA__UCUG__ACACU___CGAGGAA
(miRNA)	3'	_A___________________________	5'

UTR3

6mer

954-968

0.00439268299797125

Position on chromosome:

2:174938129-174938143

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	AUGCCUAUAUCUAA_____UUUCC______	3'
		______________AC_GU_____CUCCUU
		______________\|\|_\|\|_____\|\|\|\|\|\|
		______________UG_CA_____GAGGAA
(miRNA)	3'	_____________C__A__CUC________	5'

UTR3

8mer

235-261

0.0258626411257049

Position on chromosome:

2:174937410-174937436

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GU_____UAUAAUAUUUCCAA________	3'
		__CUGUG______________AGCUCCUU
		__\|\|\|\|\|______________\|\|\|\|\|\|\|\|
		__GACAC______________UCGAGGAA
(miRNA)	3'	_U___________________________	5'

UTR3

6mer

217-240

0.00291609009251142

Position on chromosome:

2:174937392-174937415

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAAAG___CU________AAACCCCGU______	3'
		_____CUC______UUGU_________CUCCUU
		_____\|\|\|______.\|\|\|_________\|\|\|\|\|\|
		_____GAG______GACA_________GAGGAA
(miRNA)	3'	________UUAUCU____CUC____________	5'

ENSG00000127314 (RAP1B)

hsa-miR-28-5p

0.946636424074678

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

392-415

0.0577074910389826

Position on chromosome:

12:69053422-69053445

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AUAA___A___AA__CCAAA________A	3'
		____UAA_AGA__GU_____GAGCUCCU_
		____.\|\|_\|\|\|__\|\|_____\|\|\|\|\|\|\|\|_
		____GUU_UCU__CA_____CUCGAGGA_
(miRNA)	3'	___A___A___GA_______________A	5'

ENSG00000176871 (WSB2)

hsa-miR-28-5p

0.944978155299679

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

683-700

0.00152707936440223

Position on chromosome:

12:118471395-118471412

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	UUACAGGGGA__________C__________G	3'
		__________CUCAG_AGGC_GU__GCUCCU_
		__________\|\|\|\|._\|\|.\|_\|\|__\|\|\|\|\|\|_
		__________GAGUU_UCUG_CA__CGAGGA_
(miRNA)	3'	_______________A____A__CU______A	5'

UTR3

8mer

288-315

0.0512385608438916

Position on chromosome:

12:118471000-118471027

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	A___U________C_AAACAAAAAU________	3'
		_CUC_____ACUG_G__________AGCUCCUU
		_\|\|\|_____\|\|\|\|_\|__________\|\|\|\|\|\|\|\|
		_GAG_____UGAC_C__________UCGAGGAA
(miRNA)	3'	____UUAUC____A___________________	5'

UTR3

6mer

270-290

0.00414907318405639

Position on chromosome:

12:118470982-118471002

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AAUAGCUC_____A__U_____U________	3'
		________CUUAA_AG_ACUGU___CUCCUU
		________\|\|.\|\|_\|\|_\|\|\|\|\|___\|\|\|\|\|\|
		________GAGUU_UC_UGACA___GAGGAA
(miRNA)	3'	_____________A________CUC______	5'

UTR3

7mer

126-143

0.00699464753622694

Position on chromosome:

12:118472127-118472144

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGGCCACGUC____U_____GAC_______A	3'
		__________CAGU___CUG___AGCUCCU_
		__________\|\|.\|___\|\|\|___\|\|\|\|\|\|\|_
		__________GUUA___GAC___UCGAGGA_
(miRNA)	3'	_________A____UCU___AC________A	5'

ENSG00000169247 (SH3TC2)

hsa-miR-28-5p

0.944851734092006

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

6564-6589

0.00748209651692925

Position on chromosome:

5:148420176-148420201

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UC___GAAGAG______GACA_______A	3'
		__CAG______GGAUUG____GGCUCCU_
		__\|\|.______.\|\|.\|\|____.\|\|\|\|\|\|_
		__GUU______UCUGAC____UCGAGGA_
(miRNA)	3'	_A___A___________AC_________A	5'

UTR3

8mer

5935-5958

0.0101225107921215

Position on chromosome:

5:148408000-148408023

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AGGA___C____C___GAGGAG________C	3'
		____CUC___AG_CUG______GAGCUCCU_
		____\|\|\|___\|\|_\|\|\|______\|\|\|\|\|\|\|\|_
		____GAG___UC_GAC______CUCGAGGA_
(miRNA)	3'	_______UUA__U___A_____________A	5'

UTR3

6mer

5758-5774

0.00389075556555899

Position on chromosome:

5:148407823-148407839

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CACUUUAAGAGU___UAU_____U__________	3'
		____________CUC____GACU_____CUCCUU
		____________\|\|\|____\|\|\|\|_____\|\|\|\|\|\|
		____________GAG____CUGA_____GAGGAA
(miRNA)	3'	_______________UUAU____CACUC______	5'

UTR3

6mer

5299-5322

0.00308784203171624

Position on chromosome:

5:148407364-148407387

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCUG___UC___C_AUCCGCUU______G	3'
		____CUU__UGG_C________GCUCCU_
		____\|\|.__\|.\|_\|________\|\|\|\|\|\|_
		____GAG__AUC_G________CGAGGA_
(miRNA)	3'	_______UU___U_ACACU_________A	5'

UTR3

7mer

5245-5263

0.00325960044369376

Position on chromosome:

5:148407310-148407328

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGCCCUUUG_____GC_C___C________C	3'
		_________C_CGA__G_CUG__AGCUCCU_
		_________\|_\|.\|__\|_\|\|\|__\|\|\|\|\|\|\|_
		_________G_GUU__C_GAC__UCGAGGA_
(miRNA)	3'	__________A___AU_U___AC_______A	5'

UTR3

8mer

5064-5087

0.00551372780396161

Position on chromosome:

5:148407129-148407152

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	UUGUC___C_____ACACAACCA________	3'
		_____CUC___AGA_________AGCUCCUU
		_____\|\|\|___\|\|\|_________\|\|\|\|\|\|\|\|
		_____GAG___UCU_________UCGAGGAA
(miRNA)	3'	________UUA___GACAC____________	5'

UTR3

6mer

3407-3429

0.0012318367058461

Position on chromosome:

5:148384318-148384340

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGGCA___C____CCUCCG__U______C	3'
		_____CAG_AGGC______GG_GCUCCU_
		_____\|\|._\|\|.\|______\|._\|\|\|\|\|\|_
		_____GUU_UCUG______CU_CGAGGA_
(miRNA)	3'	____A___A____ACA____________A	5'

UTR3

6mer

1915-1935

0.00136926892911551

Position on chromosome:

5:148382826-148382846

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAACCUGA___C____A_____CAU______	3'
		________UCA__AGA__GUGA___CUCCUU
		________\|\|\|__\|\|\|__\|\|\|\|___\|\|\|\|\|\|
		________AGU__UCU__CACU___GAGGAA
(miRNA)	3'	_______G___UA___GA____C________	5'

UTR3

7mer

1379-1405

0.00356751949733063

Position on chromosome:

5:148382290-148382316

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CU___GCAG____UUCACCCUU_______	3'
		__GAU____GUGG_________GCUCCUU
		__\|\|.____\|\|\|._________\|\|\|\|\|\|\|
		__CUG____CACU_________CGAGGAA
(miRNA)	3'	_U___A_______________________	5'

UTR3

6mer

474-496

0.00288395777941488

Position on chromosome:

5:148381385-148381407

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CGUUGU___UAUCCA____UACAU______	3'
		______UUC_______UGU_____CUCCUU
		______.\|\|_______\|\|\|_____\|\|\|\|\|\|
		______GAG_______ACA_____GAGGAA
(miRNA)	3'	_________UUAUCUG___CUC________	5'

UTR3

7mer

36-61

0.014729867622231

Position on chromosome:

5:148380947-148380972

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	UAU__________UGACUGCU________	3'
		___AUGGGCUGUG________GGCUCCUU
		___\|\|.\|.\|\|\|\|\|________.\|\|\|\|\|\|\|
		___UAUCUGACAC________UCGAGGAA
(miRNA)	3'	__U__________________________	5'

ENSG00000169057 (MECP2)

hsa-miR-28-5p

0.943617124347582

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

8729-8752

0.0115859652594913

Position on chromosome:

X:153295753-153295776

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	AAUAA___CAG___U__UCUCUU______	3'
		_____AGG___CUG_UG______CUCCUU
		_____\|\|.___\|\|\|_\|\|______\|\|\|\|\|\|
		_____UCU___GAC_AC______GAGGAA
(miRNA)	3'	____A____________UC__________	5'

UTR3

7mer

8529-8549

0.0163275137255751

Position on chromosome:

X:153295553-153295573

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	GCUUUGCA___UUC__A___A__________	3'
		________CUU___UA_ACU___GGCUCCUU
		________\|\|.___\|\|_\|\|\|___.\|\|\|\|\|\|\|
		________GAG___AU_UGA___UCGAGGAA
(miRNA)	3'	___________UU___C___CAC________	5'

UTR3

6mer

7839-7860

0.00496549325783574

Position on chromosome:

X:153294863-153294884

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	GUUCUUC____U____UUCCAAUU______	3'
		_______CAGU__ACU________CUCCUU
		_______\|\|.\|__\|\|\|________\|\|\|\|\|\|
		_______GUUA__UGA________GAGGAA
(miRNA)	3'	______A____UC___CACUC_________	5'

UTR3

6mer

7507-7512

0.00149113314844725

Position on chromosome:

X:153294531-153294536

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUUCUUUCCCUUCCUCCAUCCUC______	3'
		_______________________CUCCUU
		_______________________\|\|\|\|\|\|
		_______________________GAGGAA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

6155-6175

0.00161127978530334

Position on chromosome:

X:153293179-153293199

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	ACUCUUC___CAA____A_AA_______G	3'
		_______CUC___GGAC_G__GGCUCCU_
		_______\|\|\|___.\|\|\|_\|__.\|\|\|\|\|\|_
		_______GAG___UCUG_C__UCGAGGA_
(miRNA)	3'	__________UUA____A_AC_______A	5'

UTR3

7mer

5746-5770

0.00241649934760915

Position on chromosome:

X:153292770-153292794

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGAG__GC_______GC___A_________	3'
		____CU__CAGUGGG__CUG__GGCUCCUU
		____\|\|__\|\|.\|.\|.__\|\|\|__.\|\|\|\|\|\|\|
		____GA__GUUAUCU__GAC__UCGAGGAA
(miRNA)	3'	____________________AC________	5'

UTR3

8mer

4684-4691

0.0061092635915977

Position on chromosome:

X:153291708-153291715

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGUGUCCCCCGUCUAACCAC________	3'
		_____________________AGCUCCUU
		_____________________\|\|\|\|\|\|\|\|
		_____________________UCGAGGAA
(miRNA)	3'	____________________C________	5'

UTR3

6mer

3973-3998

0.00131772173777801

Position on chromosome:

X:153290997-153291022

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAC__G_______CCAGCACCACC______	3'
		___CU_GA_AGGC___________CUCCUU
		___\|\|_.\|_\|\|.\|___________\|\|\|\|\|\|
		___GA_UU_UCUG___________GAGGAA
(miRNA)	3'	_____G__A____ACACUC___________	5'

UTR3

6mer

3536-3553

0.00207710024536048

Position on chromosome:

X:153290560-153290577

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	GGUGAAAAGG_____G_______________G	3'
		__________C_CAA_AGGUU_UG_GCUCCU_
		__________\|_\|\|\|_\|\|..\|_\|\|_\|\|\|\|\|\|_
		__________G_GUU_UCUGA_AC_CGAGGA_
(miRNA)	3'	___________A___A_____C__U______A	5'

UTR3

7mer

2012-2037

0.00277458781256744

Position on chromosome:

X:153289036-153289061

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AGG___GC___A_______AGCCU_______	3'
		___CUU___AG_ACU_UGA_____GCUCCUU
		___\|\|.___\|\|_\|\|\|_\|\|\|_____\|\|\|\|\|\|\|
		___GAG___UC_UGA_ACU_____CGAGGAA
(miRNA)	3'	______UUA______C_______________	5'

UTR3

6mer

1744-1766

0.00279476432690612

Position on chromosome:

X:153288768-153288790

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UGGGUU___U___GUUUUUAUUU______	3'
		______UGG_UUG__________CUCCUU
		______\|.\|_.\|\|__________\|\|\|\|\|\|
		______AUC_GAC__________GAGGAA
(miRNA)	3'	_____U___U___ACUC____________	5'

UTR3

6mer

883-905

0.00285798557132875

Position on chromosome:

X:153287907-153287929

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUCCCA___C______GAAAACAU______	3'
		______UUC_AU_GGC________CUCCUU
		______.\|\|_\|\|_\|.\|________\|\|\|\|\|\|
		______GAG_UA_CUG________GAGGAA
(miRNA)	3'	_________U__U___ACACUC________	5'

UTR3

8mer

798-824

0.0104326115928378

Position on chromosome:

X:153296616-153296642

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UC__G__GAAA__UC___GGA________	3'
		__CU_GA____AG__CUG___AGCUCCUU
		__\|\|_.\|____\|\|__\|\|\|___\|\|\|\|\|\|\|\|
		__GA_UU____UC__GAC___UCGAGGAA
(miRNA)	3'	____G__A_____U____AC_________	5'