DIANA TOOLS - MicroT-CDS

Filters

Advanced options:

Threshold:

Results: 514 targets for miRNAs hsa-miR-221-3p

. Threshold is set to 0.7.

Name:	hsa-miR-221-3p
Alternative description:	MIMAT0000278
Related names:
miRNA sequence:	agcuacauugucugcuggguuuc
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Lung Injury Adenocarcinoma Adenoma Anemia, Sickle Cell Aortic Valve Stenosis Azoospermia Bites and Stings Brain Neoplasms Breast Neoplasms Carcinoma Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Pancreatic Ductal Carcinoma, Papillary Carcinoma, Papillary, Follicular Carcinoma, Squamous Cell Carcinoma, Transitional Cell Cardiomyopathy, Hypertrophic Cell Transformation, Neoplastic Choline Deficiency Chromosome Aberrations Colorectal Neoplasms Coronary Artery Disease Critical Illness Diabetes Mellitus, Type 2 Disease Disease Models, Animal Disease Progression Epstein-Barr Virus Infections Facial Neoplasms Fatty Liver Folic Acid Deficiency Genetic Predisposition to Disease Glioblastoma Glioma Head and Neck Neoplasms Hematologic Neoplasms Hepatitis B, Chronic Hepatitis C, Chronic Huntington Disease Inflammation Influenza in Birds Kidney Neoplasms Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myeloid, Acute Liver Neoplasms Lung Neoplasms Lupus Nephritis Lymphatic Metastasis Lymphoma, B-Cell Lymphoma, Large B-Cell, Diffuse Marek Disease Melanoma Melanoma, Experimental Mouth Neoplasms Multiple Sclerosis Muscle Neoplasms Muscular Dystrophies Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Neoplasms, Germ Cell and Embryonal Neoplasms, Hormone-Dependent Neoplasms, Multiple Primary Nerve Sheath Neoplasms Neuralgia Neuroblastoma Obesity Ovarian Neoplasms Pancreatic Neoplasms Pancreatitis, Chronic Poultry Diseases Precursor Cell Lymphoblastic Leukemia-Lymphoma Prostatic Hyperplasia Prostatic Neoplasms Psoriasis Recurrence Skin Neoplasms Stomach Neoplasms Thyroid Neoplasms Thyroid Nodule Tongue Neoplasms Urinary Bladder Neoplasms Uterine Cervical Neoplasms Wounds and Injuries

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000146352 (CLVS2)

hsa-miR-221-3p

0.998358166959338

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

88-115

0.0880484355386004

Position on chromosome:

6:123384995-123385022

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	______G_CUUAUU__U_U_________A	3'
		GAAACC_A______CA_G_UAAUGUAGC_
		\|\|\|\|\|\|_\|______\|\|_\|_.\|\|\|\|\|\|\|\|_
		CUUUGG_U______GU_C_GUUACAUCG_
(miRNA)	3'	______G_C_________U_________A	5'

UTR3

8mer

344-363

0.02531580293359

Position on chromosome:

6:123385251-123385270

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GACACAGU_AA___UAAUUA________C	3'
		________C__AGC______AAUGUAGC_
		________\|__\|\|\|______\|\|\|\|\|\|\|\|_
		________G__UCG______UUACAUCG_
(miRNA)	3'	_______U_GG___UCUG__________A	5'

UTR3

6mer

1900-1924

0.00211114118583192

Position on chromosome:

6:123386807-123386831

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUU_____C_U____UACAUUU______C	3'
		___GCCUA_C_GACA_______UGUAGC_
		___.\|\|.\|_\|_\|\|\|\|_______\|\|\|\|\|\|_
		___UGGGU_G_CUGU_______ACAUCG_
(miRNA)	3'	__U_____C_U____U____________A	5'

ENSG00000205212 (CCDC144NL)

hsa-miR-221-3p

0.997693020524155

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1758-1775

0.0172600502453647

Position on chromosome:

17:20768466-20768483

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGAAUAUGUAU____A___C______________	3'
		___________AAAU_CCA_UAG_____GUAGCU
		___________\|\|\|._\|\|\|_.\|\|_____\|\|\|\|\|\|
		___________UUUG_GGU_GUC_____CAUCGA
(miRNA)	3'	__________C________C___UGUUA______	5'

UTR3

8mer

147-162

0.0926454384395025

Position on chromosome:

17:20766855-20766870

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUGUCACAAUAU___________________G	3'
		____________AUUUAGCA___AAUGUAGC_
		____________\|...\|\|\|\|___\|\|\|\|\|\|\|\|_
		____________UGGGUCGU___UUACAUCG_
(miRNA)	3'	___________U________CUG________A	5'

ENSG00000102780 (DGKH)

hsa-miR-221-3p

0.995864105265751

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1255-1278

0.0089319270544328

Position on chromosome:

13:42804543-42804566

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUCU_____A_U___CUU__________	3'
		_____AAACC_C_GUA___CAGUGUAGCU
		_____\|\|\|\|\|_\|_\|.\|___\|\|.\|\|\|\|\|\|\|
		_____UUUGG_G_CGU___GUUACAUCGA
(miRNA)	3'	____C_______U___CU___________	5'

UTR3

7mer

3633-3658

0.00329978236147124

Position on chromosome:

13:42806921-42806946

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUA__UCU____U__CCA___U_______	3'
		___GA___AUCC_GU___AUA_UGUAGCU
		___\|\|___\|.\|\|_\|.___\|.\|_\|\|\|\|\|\|\|
		___CU___UGGG_CG___UGU_ACAUCGA
(miRNA)	3'	_____U______U__UC____U_______	5'

UTR3

6mer

4469-4492

0.00126054835455777

Position on chromosome:

13:42807757-42807780

Conserved species:

panTro2

Binding area:

(Transcript)	5'	ACCU_________UUGUAUUUU______C	3'
		____ACCCAGUGG_________UGUAGC_
		____\|\|\|\|\|\|..\|_________\|\|\|\|\|\|_
		____UGGGUCGUC_________ACAUCG_
(miRNA)	3'	___U_________UGUU___________A	5'

UTR3

7mer

5296-5315

0.00277602898617511

Position on chromosome:

13:42808584-42808603

Conserved species:

oryCun2,monDom5

Binding area:

(Transcript)	5'	AUGGAUAU______UUUA____________C	3'
		________GAAUUC____AGG__AUGUAGC_
		________.\|\|..\|____\|\|.__\|\|\|\|\|\|\|_
		________UUUGGG____UCU__UACAUCG_
(miRNA)	3'	_______C______UCG____GU_______A	5'

UTR3

8mer

6469-6494

0.0188797509937618

Position on chromosome:

13:42809757-42809782

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAU___AAGUAUUA___U____________	3'
		___ACC________AGC_GAU_AUGUAGCU
		___\|\|\|________\|\|\|_\|\|._\|\|\|\|\|\|\|\|
		___UGG________UCG_CUG_UACAUCGA
(miRNA)	3'	__U___G__________U___U________	5'

UTR3

8mer

7312-7336

0.0154402102280487

Position on chromosome:

13:42810600-42810624

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUC___AAUAUUA__G_UU_________C	3'
		___ACC_______AG_A__UAAUGUAGC_
		___\|\|\|_______\|\|_\|__.\|\|\|\|\|\|\|\|_
		___UGG_______UC_U__GUUACAUCG_
(miRNA)	3'	__U___G________G_CU_________A	5'

UTR3

6mer

7383-7406

0.00118383601408655

Position on chromosome:

13:42810671-42810694

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUUC_UG_________UUAUUUUC______C	3'
		____A__UCA_CA_AC________UGUAGC_
		____\|__.\|\|_\|\|_\|\|________\|\|\|\|\|\|_
		____U__GGU_GU_UG________ACAUCG_
(miRNA)	3'	___U_UG___C__C__UU____________A	5'

UTR3

9mer

13509-13526

0.0485623969366511

Position on chromosome:

13:42816797-42816814

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AUAAUUUUGGU___UUU_U__________	3'
		___________GGC___G_UAAUGUAGCU
		___________.\|\|___\|_.\|\|\|\|\|\|\|\|\|
		___________UCG___C_GUUACAUCGA
(miRNA)	3'	__________G___U___U__________	5'

ENSG00000165416 (SUGT1)

hsa-miR-221-3p

0.994553604140475

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

936-961

0.00993082478695739

Position on chromosome:

13:53262907-53262932

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UU_____CAAAG___UUAUA________A	3'
		__AACUU_____AGC_____AAUGUAGC_
		__\|\|\|.._____\|\|\|_____\|\|\|\|\|\|\|\|_
		__UUGGG_____UCG_____UUACAUCG_
(miRNA)	3'	_U_____________UCUG_________A	5'

UTR3

6mer

1853-1867

0.000868923769514467

Position on chromosome:

13:53263824-53263838

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUAGCUGUUUCUGA____GU____________	3'
		______________CCAG__G_CA__GUAGCU
		______________\|\|\|\|__\|_\|\|__\|\|\|\|\|\|
		______________GGUC__C_GU__CAUCGA
(miRNA)	3'	_____________G____GU_U__UA______	5'

UTR3

9mer

2492-2515

0.0147995232712179

Position on chromosome:

13:53264463-53264486

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCCUU____UCU__UAUCU__________	3'
		_____AUCC___GC_____CAAUGUAGCU
		_____\|.\|\|___\|\|_____\|\|\|\|\|\|\|\|\|\|
		_____UGGG___CG_____GUUACAUCGA
(miRNA)	3'	____U____U____UCU____________	5'

UTR3

6mer

3094-3117

0.0013843179388419

Position on chromosome:

13:53265065-53265088

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAGU__UG_G_U__U___UCAC______C	3'
		____GG__C_A_CA_GGC____UGUAGC_
		____..__\|_\|_\|\|_\|.\|____\|\|\|\|\|\|_
		____UU__G_U_GU_CUG____ACAUCG_
(miRNA)	3'	___C__UG_G_C______UU________A	5'

UTR3

6mer

3213-3228

0.00103966234130419

Position on chromosome:

13:53265184-53265199

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACAUUUUCAUU_UU___U____C______C	3'
		____________C__GGC___CA_UGUAGC_
		____________\|__.\|\|___\|\|_\|\|\|\|\|\|_
		____________G__UCG___GU_ACAUCG_
(miRNA)	3'	___________U_GG___UCU__U______A	5'

UTR3

7mer

3727-3746

0.00425749388749219

Position on chromosome:

13:53265698-53265717

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UUGGUGUGC____CU_U__ACU_______	3'
		_________AUCU__C_GA___UGUAGCU
		_________\|.\|.__\|_\|\|___\|\|\|\|\|\|\|
		_________UGGG__G_CU___ACAUCGA
(miRNA)	3'	________U____UC_U__GUU_______	5'

UTR3

6mer

4687-4707

0.00110506874556389

Position on chromosome:

13:53266658-53266678

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUUCUUCU___U____CUCCUGA______	3'
		________GCC_CAGC_______GUAGCU
		________.\|\|_\|\|\|\|_______\|\|\|\|\|\|
		________UGG_GUCG_______CAUCGA
(miRNA)	3'	_______U________UCUGUUA______	5'

UTR3

6mer

8305-8331

0.00186657748137237

Position on chromosome:

13:53270276-53270302

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	G______UUC__UCUUUGUAU_______A	3'
		_UCUAGC___CA_________GUGUAGC_
		_.\|.\|\|\|___\|\|_________.\|\|\|\|\|\|_
		_GGGUCG___GU_________UACAUCG_
(miRNA)	3'	U______UCU__________________A	5'

UTR3

6mer

8914-8932

0.00100650261407647

Position on chromosome:

13:53270885-53270903

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUCUUCUCAC______CUCCUGA______	3'
		__________UUCAGC_______GUAGCU
		__________..\|\|\|\|_______\|\|\|\|\|\|
		__________GGGUCG_______CAUCGA
(miRNA)	3'	_________U______UCUGUUA______	5'

UTR3

6mer

9281-9299

0.000736378189433285

Position on chromosome:

13:53271252-53271270

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUCCUCCUUC______CUCCUGA______	3'
		__________CUCAGC_______GUAGCU
		__________\|.\|\|\|\|_______\|\|\|\|\|\|
		__________GGGUCG_______CAUCGA
(miRNA)	3'	_________U______UCUGUUA______	5'

UTR3

7mer

9614-9638

0.00571624512310598

Position on chromosome:

13:53271585-53271609

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGU_____UA___UU__G__U_______A	3'
		___GGAAU__GGU__GA_CA_AUGUAGC_
		___\|.\|\|.__.\|.__\|\|_\|\|_\|\|\|\|\|\|\|_
		___CUUUG__UCG__CU_GU_UACAUCG_
(miRNA)	3'	________GG___U______________A	5'

UTR3

6mer

10253-10274

0.00237004595547217

Position on chromosome:

13:53272224-53272245

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAACA_____UU__G_AUAU_______A	3'
		______GGGAC__AG_A____GUGUAGC_
		______\|..\|\|__\|\|_\|____.\|\|\|\|\|\|_
		______CUUUG__UC_U____UACAUCG_
(miRNA)	3'	___________GG__G_CUGU_______A	5'

UTR3

6mer

10328-10355

0.000848586036095252

Position on chromosome:

13:53272299-53272326

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	U_GG__AUCU_ACA____UAGAG______	3'
		_G__CC____G___AGAC_____GUAGCU
		_.__\|\|____\|___\|\|\|\|_____\|\|\|\|\|\|
		_U__GG____C___UCUG_____CAUCGA
(miRNA)	3'	C_UU__GU___G______UUA________	5'

UTR3

6mer

10714-10734

0.000777708007468881

Position on chromosome:

13:53272685-53272705

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUCCUCCU___U____CUCU__________	3'
		________GCC_CAGC____CAG_GUAGCU
		________.\|\|_\|\|\|\|____\|\|._\|\|\|\|\|\|
		________UGG_GUCG____GUU_CAUCGA
(miRNA)	3'	_______U________UCU____A______	5'

UTR3

6mer

12080-12098

0.00360769135157075

Position on chromosome:

13:53274051-53274069

Conserved species:

panTro2,rheMac2,rn4

Binding area:

(Transcript)	5'	AUCUUGUUA___U____AUUUU______C	3'
		_________CUA_UAGA_____UGUAGC_
		_________\|.\|_.\|\|\|_____\|\|\|\|\|\|_
		_________GGU_GUCU_____ACAUCG_
(miRNA)	3'	________G___C____GUU________A	5'

UTR3

9mer

13013-13039

0.0454987308911224

Position on chromosome:

13:53274984-53275010

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AA___UU____UUUU___AA__________	3'
		__GAA__UCUA____GUA___AAUGUAGCU
		__\|\|\|__.\|.\|____\|.\|___\|\|\|\|\|\|\|\|\|
		__CUU__GGGU____CGU___UUACAUCGA
(miRNA)	3'	_____U____________CUG_________	5'

ENSG00000117016 (RIMS3)

hsa-miR-221-3p

0.994084461959153

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

5322-5346

0.0481376600181622

Position on chromosome:

1:41091673-41091697

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCU___A_U__UUUCU__GA________A	3'
		___GCC_C_GU_____GA__AAUGUAGC_
		___.\|\|_\|_\|._____\|\|__\|\|\|\|\|\|\|\|_
		___UGG_G_CG_____CU__UUACAUCG_
(miRNA)	3'	__U_____U__U______G_________A	5'

UTR3

7mer

5219-5241

0.00760382400203608

Position on chromosome:

1:41091570-41091592

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CCACU___UG_GUUCU____C_________A	3'
		_____GAA__C_____GCAG___AUGUAGC_
		_____\|\|\|__\|_____\|\|\|\|___\|\|\|\|\|\|\|_
		_____CUU__G_____CGUC___UACAUCG_
(miRNA)	3'	________UG_GU_______UGU_______A	5'

UTR3

7mer

3554-3580

0.00378376346073756

Position on chromosome:

1:41089905-41089931

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	G___AGUA___AUGUUU_UG________A	3'
		_GAC____UAG______G__GAUGUAGC_
		_.\|\|____.\|\|______\|__.\|\|\|\|\|\|\|_
		_UUG____GUC______C__UUACAUCG_
(miRNA)	3'	U___G______GU_____UG________A	5'

UTR3

8mer

2242-2268

0.022495826391561

Position on chromosome:

1:41088593-41088619

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	G__U____CUUU___AAUGA________A	3'
		_GG_ACUU____GGA_____AAUGUAGC_
		_\|._\|\|..____.\|\|_____\|\|\|\|\|\|\|\|_
		_CU_UGGG____UCU_____UUACAUCG_
(miRNA)	3'	___U____UCG____G____________A	5'

UTR3

7mer

1414-1435

0.0124350210387597

Position on chromosome:

1:41087765-41087786

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GAUAAA_GG_UU_AUCUUU_C_______A	3'
		______G__C__A______C_AUGUAGC_
		______.__\|__\|______\|_\|\|\|\|\|\|\|_
		______U__G__U______G_UACAUCG_
(miRNA)	3'	_____C_UU_GG_CGUCU__U_______A	5'

ENSG00000176842 (IRX5)

hsa-miR-221-3p

0.992984621981949

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

232-252

0.0916509968222997

Position on chromosome:

16:54968018-54968038

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AAAUCUU____U___UAUU_________A	3'
		_______AUUC_GUA____UAAUGUAGC_
		_______\|..\|_\|.\|____.\|\|\|\|\|\|\|\|_
		_______UGGG_CGU____GUUACAUCG_
(miRNA)	3'	______U____U___CU___________A	5'

ENSG00000064218 (DMRT3)

hsa-miR-221-3p

0.992420100865253

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

664-686

0.0903767576873797

Position on chromosome:

9:991670-991692

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AGAUU______UGU____U_________A	3'
		_____AAGCUU___CAGG_UAAUGUAGC_
		_____\|\|.\|..___\|\|\|._.\|\|\|\|\|\|\|\|_
		_____UUUGGG___GUCU_GUUACAUCG_
(miRNA)	3'	____C______UC_______________A	5'

ENSG00000182389 (CACNB4)

hsa-miR-221-3p

0.987914805188779

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4034-4060

0.00261971119149244

Position on chromosome:

2:152693324-152693350

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AA__U__UU____UUUUAU____________	3'
		__GA_AC__A_CA______GGCAG_GUAGCU
		__\|\|_\|\|__\|_\|\|______\|.\|\|._\|\|\|\|\|\|
		__CU_UG__U_GU______CUGUU_CAUCGA
(miRNA)	3'	____U__GG_C_____________A______	5'

UTR3

8mer

1073-1092

0.0639347791244778

Position on chromosome:

2:152690363-152690382

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UGCAUUAG_______AAAA_________A	3'
		________CAGUAGA____UAAUGUAGC_
		________\|\|\|.\|\|\|____.\|\|\|\|\|\|\|\|_
		________GUCGUCU____GUUACAUCG_
(miRNA)	3'	_______G____________________A	5'

UTR3

6mer

252-268

0.0161237556636445

Position on chromosome:

2:152689542-152689558

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUAUUUUUCUU______GUAU_________A	3'
		___________AUCUAG______GUGUAGC_
		___________\|.\|.\|\|______.\|\|\|\|\|\|_
		___________UGGGUC______UACAUCG_
(miRNA)	3'	__________U______GUCUGU_______A	5'

ENSG00000168300 (PCMTD1)

hsa-miR-221-3p

0.987547798601633

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2715-2737

0.0821832227527568

Position on chromosome:

8:52732855-52732877

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AUAAU___UU___UCUUGAA________A	3'
		_____UCC__UAG_______AAUGUAGC_
		_____.\|\|__.\|\|_______\|\|\|\|\|\|\|\|_
		_____GGG__GUC_______UUACAUCG_
(miRNA)	3'	____U___UC___UG_____________A	5'

ENSG00000204138 (PHACTR4)

hsa-miR-221-3p

0.9868023943164

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

120-145

0.0812206770818409

Position on chromosome:

1:28823182-28823207

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CU__GG_GGA_____CUUUG________A	3'
		__GA__U___CAGCA_____AAUGUAGC_
		__\|\|__.___\|\|\|\|\|_____\|\|\|\|\|\|\|\|_
		__CU__G___GUCGU_____UUACAUCG_
(miRNA)	3'	____UU_G_______CUG__________A	5'

ENSG00000073792 (IGF2BP2)

hsa-miR-221-3p

0.986038536861679

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1752-1777

0.0802884206497901

Position on chromosome:

3:185363279-185363304

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CA______AAACAACG___G________C	3'
		__CCAGCA________GAU_AAUGUAGC_
		__\|\|\|\|\|\|________\|\|._\|\|\|\|\|\|\|\|_
		__GGUCGU________CUG_UUACAUCG_
(miRNA)	3'	_G__________________________A	5'

ENSG00000214595 (EML6)

hsa-miR-221-3p

0.985925491247546

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

278-300

0.0343539590313422

Position on chromosome:

2:55197510-55197532

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	ACAAA_______UAU_U___________C	3'
		_____GAAAUCC___C_GAUAAUGUAGC_
		_____\|\|\|\|.\|\|___\|_\|\|.\|\|\|\|\|\|\|\|_
		_____CUUUGGG___G_CUGUUACAUCG_
(miRNA)	3'	____________UC__U___________A	5'

UTR3

8mer

325-347

0.0398790378658407

Position on chromosome:

2:55197557-55197579

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GCCUCG_UU____UAACCAAU________	3'
		______G__ACCC________AUGUAGCU
		______\|__\|\|\|\|________\|\|\|\|\|\|\|\|
		______C__UGGG________UACAUCGA
(miRNA)	3'	_______UU____UCGUCUGU________	5'

UTR3

8mer

1207-1235

0.00592174621154253

Position on chromosome:

2:55198439-55198467

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	______CU___U__CACUUUCC________	3'
		_AGCCC__CAG_CA________AUGUAGCU
		_\|.\|\|\|__\|\|\|_\|\|________\|\|\|\|\|\|\|\|
		_UUGGG__GUC_GU________UACAUCGA
(miRNA)	3'	U_____UC___U__________________	5'

ENSG00000123572 (NRK)

hsa-miR-221-3p

0.985464577728434

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

107-134

0.0729447895193623

Position on chromosome:

X:105199700-105199727

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	________AAACUUUACUUU_________A	3'
		_AAAUCCA____________UAAUGUAGC_
		_\|\|\|.\|\|\|____________.\|\|\|\|\|\|\|\|_
		_UUUGGGU____________GUUACAUCG_
(miRNA)	3'	C_______CGUCU________________A	5'

UTR3

7mer

1500-1526

0.00332379442702828

Position on chromosome:

X:105201093-105201119

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AC___UU_CAUCA___AUG__________	3'
		__AAC__A_____AGA___UAGUGUAGCU
		__\|\|\|__\|_____\|\|\|___.\|.\|\|\|\|\|\|\|
		__UUG__U_____UCU___GUUACAUCGA
(miRNA)	3'	_U___GG_CG___________________	5'

UTR3

6mer

2333-2353

0.00335186045304429

Position on chromosome:

X:105201926-105201946

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	AAAUUAU_____UACAUU__CU______A	3'
		_______AUCUA______AC__UGUAGC_
		_______\|.\|.\|______\|\|__\|\|\|\|\|\|_
		_______UGGGU______UG__ACAUCG_
(miRNA)	3'	______U_____CGUC____UU______A	5'

ENSG00000111276 (CDKN1B)

hsa-miR-221-3p

0.983995679994865

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

183-206

0.0383812892558487

Position on chromosome:

12:12874145-12874168

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	AUCU____CUAAA____UUG________A	3'
		____GCCU_____AGCG___GAUGUAGC_
		____.\|\|._____\|\|\|.___.\|\|\|\|\|\|\|_
		____UGGG_____UCGU___UUACAUCG_
(miRNA)	3'	___U_____________CUG________A	5'

UTR3

7mer

266-279

0.0396413415689112

Position on chromosome:

12:12874228-12874241

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UGUAUAUAGUUUUU____UUU____________A	3'
		______________ACCU________AUGUAGC_
		______________\|\|\|.________\|\|\|\|\|\|\|_
		______________UGGG________UACAUCG_
(miRNA)	3'	_____________U____UCGUCUGU_______A	5'

ENSG00000186480 (INSIG1)

hsa-miR-221-3p

0.983786350101809

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1731-1751

0.0778067673730849

Position on chromosome:

7:155101712-155101732

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAUCUAU____GU____AA_________C	3'
		_______AUCU__UAGA__UAAUGUAGC_
		_______\|.\|.__.\|\|\|__.\|\|\|\|\|\|\|\|_
		_______UGGG__GUCU__GUUACAUCG_
(miRNA)	3'	______U____UC_______________A	5'

ENSG00000214946 (TBC1D26)

hsa-miR-221-3p

0.983126928953454

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

715-739

0.0771442496427508

Position on chromosome:

17:15647948-15647972

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUG____UUUU____AGAA_________	3'
		____CCAG____CAGA____AAUGUAGCU
		____\|\|\|\|____\|\|\|\|____\|\|\|\|\|\|\|\|\|
		____GGUC____GUCU____UUACAUCGA
(miRNA)	3'	___G____________G____________	5'

ENSG00000052795 (FNIP2)

hsa-miR-221-3p

0.981231898565428

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

695-715

0.0234592856089113

Position on chromosome:

4:159826392-159826412

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GUGCAAU____________AU_________C	3'
		_______AAACCCA__AGA__CAAUGUAGC_
		_______\|\|\|\|\|\|\|__\|\|\|__\|\|\|\|\|\|\|\|\|_
		_______UUUGGGU__UCU__GUUACAUCG_
(miRNA)	3'	______C_______CG______________A	5'

UTR3

6mer

724-746

0.00207366681450277

Position on chromosome:

4:159826421-159826443

Conserved species:

panTro2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUAAU____UCA___UG___UU______A	3'
		_____CCCA___AGA__UAG__UGUAGC_
		_____\|\|\|\|___\|\|\|__.\|.__\|\|\|\|\|\|_
		_____GGGU___UCU__GUU__ACAUCG_
(miRNA)	3'	____U____CG_________________A	5'

UTR3

6mer

2484-2508

0.00595408479742741

Position on chromosome:

4:159828181-159828205

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUU____GUUG___GUA__UUU______A	3'
		___ACCU____AGU___AC___UGUAGC_
		___\|\|\|.____\|\|.___\|\|___\|\|\|\|\|\|_
		___UGGG____UCG___UG___ACAUCG_
(miRNA)	3'	__U___________UC___UU_______A	5'

UTR3

9mer

2669-2685

0.0277307589779009

Position on chromosome:

4:159828366-159828382

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	ACAUGACAAUGA_______A______________	3'
		____________AAAUUUA______AAUGUAGCU
		____________\|\|\|...\|______\|\|\|\|\|\|\|\|\|
		____________UUUGGGU______UUACAUCGA
(miRNA)	3'	___________C_______CGUCUG_________	5'

UTR3

7mer

2966-2982

0.0161552728461553

Position on chromosome:

4:159828663-159828679

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GAGAUUUUAUAA_________C____________	3'
		____________AAAUUUAGU______UGUAGCU
		____________\|\|\|...\|\|.______\|\|\|\|\|\|\|
		____________UUUGGGUCG______ACAUCGA
(miRNA)	3'	___________C_________UCUGUU_______	5'

ENSG00000022355 (GABRA1)

hsa-miR-221-3p

0.977632800985381

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1387-1406

0.0202064497663356

Position on chromosome:

5:161325816-161325835

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUUCAAUA__UG______CCAU_______A	3'
		________AG__UU_GUA____AUGUAGC_
		________\|.__.._\|.\|____\|\|\|\|\|\|\|_
		________UU__GG_CGU____UACAUCG_
(miRNA)	3'	_______C__UG__U___CUGU_______A	5'

UTR3

6mer

1468-1484

0.00369290548988557

Position on chromosome:

5:161325897-161325913

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,monDom5,galGal3

Binding area:

(Transcript)	5'	UAAUAUUACAU____UUU____C______A	3'
		___________UUCA____AUA_UGUAGC_
		___________..\|\|____\|.\|_\|\|\|\|\|\|_
		___________GGGU____UGU_ACAUCG_
(miRNA)	3'	__________U____CGUC___U______A	5'

UTR3

8mer

2222-2243

0.0485463237374766

Position on chromosome:

5:161326651-161326672

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUAUCAA____AAAUUAUUAU________	3'
		_______AAAC__________AUGUAGCU
		_______\|\|\|\|__________\|\|\|\|\|\|\|\|
		_______UUUG__________UACAUCGA
(miRNA)	3'	______C____GGUCGUCUGU________	5'

ENSG00000165338 (HECTD2)

hsa-miR-221-3p

0.976270854000566

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

19-35

0.0491730582284715

Position on chromosome:

10:93272161-93272177

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	ACUUGAAAUAU_____UU__U__________A	3'
		___________AAUCU__UA____AUGUAGC_
		___________\|\|.\|.__.\|____\|\|\|\|\|\|\|_
		___________UUGGG__GU____UACAUCG_
(miRNA)	3'	__________U_____UC__CUGU_______A	5'

UTR3

7mer

415-429

0.022283769238947

Position on chromosome:

10:93272557-93272571

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,galGal3

Binding area:

(Transcript)	5'	ACAUUAUCUUUAA__UA____________C	3'
		_____________CA__AGGC_AUGUAGC_
		_____________\|\|__\|\|.\|_\|\|\|\|\|\|\|_
		_____________GU__UCUG_UACAUCG_
(miRNA)	3'	____________G__CG____U_______A	5'

ENSG00000177432 (NAP1L5)

hsa-miR-221-3p

0.975564713677838

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

454-470

0.046528028017749

Position on chromosome:

4:89617520-89617536

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2

Binding area:

(Transcript)	5'	AUUUACUUGAA_____G________________A	3'
		___________GAGAU_UAG_____AAUGUAGC_
		___________\|\|.\|._.\|\|_____\|\|\|\|\|\|\|\|_
		___________CUUUG_GUC_____UUACAUCG_
(miRNA)	3'	________________G___GUCUG________A	5'

UTR3

8mer

384-411

0.0200736712027216

Position on chromosome:

4:89617450-89617477

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	G___U_______UCUUUCUGUC________	3'
		_CCU_GU_GACG__________AUGUAGCU
		_\|\|._\|._\|\|\|.__________\|\|\|\|\|\|\|\|
		_GGG_CG_CUGU__________UACAUCGA
(miRNA)	3'	U___U__U______________________	5'

UTR3

7mer

370-391

0.00436402961649472

Position on chromosome:

4:89617436-89617457

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUGUC__G____UUUU_G_________	3'
		_______AU_UAGC____A_GGUGUAGCU
		_______\|._.\|\|\|____\|_..\|\|\|\|\|\|\|
		_______UG_GUCG____U_UUACAUCGA
(miRNA)	3'	______U__G____UC___G_________	5'

ENSG00000105327 (BBC3)

hsa-miR-221-3p

0.973224019123008

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

876-899

0.0694313717778352

Position on chromosome:

19:47724957-47724980

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GCGG_______UCUCU______C_______A	3'
		____GGGACUU_____GCA__C_AUGUAGC_
		____\|..\|\|.._____\|\|\|__\|_\|\|\|\|\|\|\|_
		____CUUUGGG_____CGU__G_UACAUCG_
(miRNA)	3'	___________U_______CU_U_______A	5'

ENSG00000196632 (WNK3)

hsa-miR-221-3p

0.972417670324637

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4787-4807

0.00207623310490912

Position on chromosome:

X:54224043-54224063

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUUCUCCU___U____CUCCUGA______	3'
		________GCC_CAGC_______GUAGCU
		________.\|\|_\|\|\|\|_______\|\|\|\|\|\|
		________UGG_GUCG_______CAUCGA
(miRNA)	3'	_______U________UCUGUUA______	5'

UTR3

6mer

2235-2255

0.00302468322291846

Position on chromosome:

X:54221491-54221511

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UGAAAAU_____UAU___U__U_______A	3'
		_______AACCC___GUA_AU__UGUAGC_
		_______\|\|\|\|\|___\|.\|_\|.__\|\|\|\|\|\|_
		_______UUGGG___CGU_UG__ACAUCG_
(miRNA)	3'	______U_____U_____C__UU______A	5'

UTR3

8mer

255-278

0.0638319818795953

Position on chromosome:

X:54219511-54219534

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CUCU___UU_UUAAUU___G________A	3'
		____CCU__C______GGG_AAUGUAGC_
		____\|\|.__\|______.\|._\|\|\|\|\|\|\|\|_
		____GGG__G______UCU_UUACAUCG_
(miRNA)	3'	___U___UC__________G________A	5'

ENSG00000112183 (RBM24)

hsa-miR-221-3p

0.972369194981233

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

41-65

0.00724270340916533

Position on chromosome:

6:17292392-17292416

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2

Binding area:

(Transcript)	5'	CCCU____AUUUUC____UUUUA______	3'
		____CCCA______CAAU_____GUAGCU
		____\|\|\|\|______\|\|\|\|_____\|\|\|\|\|\|
		____GGGU______GUUA_____CAUCGA
(miRNA)	3'	___U____CGUCU________________	5'

UTR3

8mer

383-409

0.040651615266574

Position on chromosome:

6:17292734-17292760

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AG_____ACAG____A___AU________	3'
		__GGAAU____AGCG_GCA__AUGUAGCU
		__\|.\|\|.____\|\|\|._.\|\|__\|\|\|\|\|\|\|\|
		__CUUUG____UCGU_UGU__UACAUCGA
(miRNA)	3'	_______GG______C_____________	5'

UTR3

7mer

1198-1219

0.0210090658356633

Position on chromosome:

6:17293549-17293570

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UAAAUU_______A__UCUA________G	3'
		______AUUUAGU_AG____GAUGUAGC_
		______\|...\|\|._\|\|____.\|\|\|\|\|\|\|_
		______UGGGUCG_UC____UUACAUCG_
(miRNA)	3'	_____U__________UG__________A	5'

ENSG00000155962 (CLIC2)

hsa-miR-221-3p

0.971102708598714

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1097-1117

0.0196619392153654

Position on chromosome:

X:154506597-154506617

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	ACCUCAU_G____AGAU__G________C	3'
		_______G_UCAG____GA_AAUGUAGC_
		_______._.\|\|\|____\|\|_\|\|\|\|\|\|\|\|_
		_______U_GGUC____CU_UUACAUCG_
(miRNA)	3'	______U_G____GU____G________A	5'

UTR3

8mer

204-227

0.0484876636792138

Position on chromosome:

X:154505704-154505727

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGGU____A_____AAUA__________A	3'
		____GACU_UAGCA____AUAAUGUAGC_
		____.\|\|._.\|\|\|\|____\|.\|\|\|\|\|\|\|\|_
		____UUGG_GUCGU____UGUUACAUCG_
(miRNA)	3'	___U__________C_____________A	5'

ENSG00000182768 (NGRN)

hsa-miR-221-3p

0.970859416125681

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

400-418

0.0680084805128909

Position on chromosome:

15:90815421-90815439

Conserved species:

panTro2,rheMac2,canFam2,echTel1

Binding area:

(Transcript)	5'	CUUACAACA____AA____A__________A	3'
		_________AAAU__AGUA___AAUGUAGC_
		_________\|\|\|.__\|\|.\|___\|\|\|\|\|\|\|\|_
		_________UUUG__UCGU___UUACAUCG_
(miRNA)	3'	________C____GG____CUG________A	5'

ENSG00000056586 (RC3H2)

hsa-miR-221-3p

0.970729227643816

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4784-4805

0.0159768487938407

Position on chromosome:

9:125611619-125611640

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUCAAG____UUUUUAU__GUU______A	3'
		______CAGC_______GA___UGUAGC_
		______\|\|\|\|_______\|\|___\|\|\|\|\|\|_
		______GUCG_______CU___ACAUCG_
(miRNA)	3'	_____G____U________GUU______A	5'

UTR3

6mer

4444-4471

0.0118812735756054

Position on chromosome:

9:125611279-125611306

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	___UG_G_U____U__UUUUAUC______A	3'
		_AG__U_G_GCAG_GC_______UGUAGC_
		_\|.__._._\|\|\|\|_.\|_______\|\|\|\|\|\|_
		_UU__G_U_CGUC_UG_______ACAUCG_
(miRNA)	3'	C__UG_G_________UU___________A	5'

UTR3

7mer

4140-4155

0.0125590224697187

Position on chromosome:

9:125610975-125610990

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GCUUUCUUGAGA______U______________G	3'
		____________AAACCC_GU_____AUGUAGC_
		____________\|\|\|\|\|\|_\|._____\|\|\|\|\|\|\|_
		____________UUUGGG_CG_____UACAUCG_
(miRNA)	3'	___________C______U__UCUGU_______A	5'

UTR3

6mer

3259-3284

0.00298361230659487

Position on chromosome:

9:125610094-125610119

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CA__UG_AUGA____GUUUGUU______A	3'
		__AA__U____AGAU_______UGUAGC_
		__\|\|__.____\|\|\|._______\|\|\|\|\|\|_
		__UU__G____UCUG_______ACAUCG_
(miRNA)	3'	_C__UG_GUCG____UU___________A	5'

UTR3

6mer

1967-1988

0.00153214049527251

Position on chromosome:

9:125608802-125608823

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGCCGC_______UACU_UG_U______A	3'
		______AUUCAGU____G__G_UGUAGC_
		______\|..\|\|\|.____\|__._\|\|\|\|\|\|_
		______UGGGUCG____C__U_ACAUCG_
(miRNA)	3'	_____U_______U____UG_U______A	5'

UTR3

6mer

145-169

0.0231593069759615

Position on chromosome:

9:125606980-125607004

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGU______UGUGU__UUUUGC______A	3'
		___GAAUUC_____GU______UGUAGC_
		___.\|\|..\|_____\|.______\|\|\|\|\|\|_
		___UUUGGG_____CG______ACAUCG_
(miRNA)	3'	__C______U______UCUGUU______A	5'

UTR3

8mer

1900-1926

0.00715903059198517

Position on chromosome:

9:125622369-125622395

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	C___________UCCUGUAAGU________A	3'
		_ACCCA__AGAC__________AAUGUAGC_
		_\|\|\|\|\|__\|\|\|\|__________\|\|\|\|\|\|\|\|_
		_UGGGU__UCUG__________UUACAUCG_
(miRNA)	3'	U_____CG______________________A	5'

ENSG00000204952 (FBXO47)

hsa-miR-221-3p

0.968961993961935

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

33-53

0.0669455206204559

Position on chromosome:

17:37092718-37092738

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUACUG________AAUAA_________A	3'
		_______GGGAUUCA______AAUGUAGC_
		_______\|..\|..\|\|______\|\|\|\|\|\|\|\|_
		_______CUUUGGGU______UUACAUCG_
(miRNA)	3'	_______________CGUCUG________A	5'

ENSG00000142794 (NBPF3)

hsa-miR-221-3p

0.968374908185616

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

201-218

0.0117635451315185

Position on chromosome:

1:21810081-21810098

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUGUGACACG_______C___U_______A	3'
		__________UUCA_CA_GAC_AUGUAGC_
		__________..\|\|_\|\|_\|\|\|_\|\|\|\|\|\|\|_
		__________GGGU_GU_CUG_UACAUCG_
(miRNA)	3'	_________U____C______U_______A	5'

UTR3

6mer

254-276

0.00605827989111108

Position on chromosome:

1:21810134-21810156

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAAUUU______________UCUCUGG______	3'
		______GAACC____AGAUA_______GUAGCU
		______.\|\|\|\|____\|\|\|.\|_______\|\|\|\|\|\|
		______UUUGG____UCUGU_______CAUCGA
(miRNA)	3'	_____C_____GUCG_____UA___________	5'

UTR3

9mer

889-912

0.0488075305399052

Position on chromosome:

1:21810769-21810792

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUCA____A______AAU____________	3'
		_____GAAG___AGUA___GAUAAUGUAGCU
		_____\|\|\|.___\|\|.\|___\|\|.\|\|\|\|\|\|\|\|\|
		_____CUUU___UCGU___CUGUUACAUCGA
(miRNA)	3'	_________GGG___________________	5'

ENSG00000062194 (GPBP1)

hsa-miR-221-3p

0.968085591784057

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

485-506

0.0664756319649966

Position on chromosome:

5:56559065-56559086

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAACAA_____AAAAA___A________A	3'
		______AAACC_____GGA_AAUGUAGC_
		______\|\|\|\|\|_____.\|\|_\|\|\|\|\|\|\|\|_
		______UUUGG_____UCU_UUACAUCG_
(miRNA)	3'	_____C_____GUCG____G________A	5'

ENSG00000089177 (KIF16B)

hsa-miR-221-3p

0.967647772132691

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

244-262

0.0662455473050446

Position on chromosome:

20:16252993-16253011

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCUUAAAUU______G_CU_________A	3'
		_________ACUCAG_A__UAAUGUAGC_
		_________\|\|.\|\|\|_\|__.\|\|\|\|\|\|\|\|_
		_________UGGGUC_U__GUUACAUCG_
(miRNA)	3'	________U______G_CU_________A	5'