DIANA TOOLS - MicroT-CDS

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Results: 2074 targets for miRNAs hsa-miR-20a-5p

. Threshold is set to 0.7.

Name:	hsa-miR-20a-5p
Alternative description:	MIMAT0000075
Related names:
miRNA sequence:	uaaagugcuuauagugcagguag
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Adenocarcinoma Adenoma Alzheimer Disease Anemia, Sickle Cell Asthma Astrocytoma Atherosclerosis Azoospermia Bites and Stings Blast Crisis Bone Neoplasms Brain Neoplasms Breast Neoplasms Breast Neoplasms, Male Burkitt Lymphoma Carcinoma Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Pancreatic Ductal Carcinoma, Renal Cell Carcinoma, Small Cell Carcinoma, Squamous Cell Cardiovascular Diseases Cell Transformation, Neoplastic Cell Transformation, Viral Central Nervous System Neoplasms Cerebellar Neoplasms Choline Deficiency Chronic Periodontitis Colonic Neoplasms Colorectal Neoplasms Cystadenocarcinoma, Serous Dermatitis, Atopic Diabetes Mellitus Disease Disease Models, Animal Disease Progression Encephalitis, Viral Endometriosis Epstein-Barr Virus Infections Esophageal Neoplasms Facial Neoplasms Fatty Liver Fibrosis Folic Acid Deficiency Genetic Predisposition to Disease Glioblastoma Glioma Head and Neck Neoplasms Helicobacter Infections Hematologic Neoplasms Hepatitis B Hepatitis C, Chronic HIV Infections Hodgkin Disease Huntington Disease Hypertension, Pulmonary Hypertrophy Inflammation Influenza in Birds Ischemia Kidney Neoplasms Leukemia Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myelogenous, Chronic, BCR-ABL Positive Leukemia, T-Cell Liver Neoplasms Lung Neoplasms Lupus Nephritis Lymphoma Lymphoma, B-Cell Lymphoma, Follicular Lymphoma, Large B-Cell, Diffuse Lymphoma, T-Cell Lymphoproliferative Disorders Marek Disease Medulloblastoma Melanoma Mesothelioma Monoclonal Gammopathy of Undetermined Significance Multiple Myeloma Multiple Sclerosis Multiple Sclerosis, Relapsing-Remitting Myelodysplastic Syndromes Myocardial Infarction Myocardial Ischemia Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Nerve Sheath Neoplasms Neuralgia Neuroblastoma Ovarian Neoplasms Pancreatic Neoplasms Pancreatitis, Chronic Pleural Neoplasms Polycystic Kidney Diseases Polycythemia Vera Postmortem Changes Poultry Diseases Precursor Cell Lymphoblastic Leukemia-Lymphoma Prostatic Neoplasms Psoriasis Pulmonary Embolism Recurrence Retroviridae Infections Rhabdoviridae Infections Sarcoma, Kaposi Small Cell Lung Carcinoma Stomach Neoplasms Testicular Neoplasms Thrombocythemia, Essential Thyroid Neoplasms Translocation, Genetic Tuberculosis Tumor Virus Infections Urinary Bladder Neoplasms Uterine Cervical Neoplasms Virus Diseases

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000088179 (PTPN4)

hsa-miR-20a-5p

0.999999980181457

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

126-147

0.176352229345602

Position on chromosome:

2:120734773-120734794

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	UUUGAAA____CA_______U_________	3'
		_______ACUU__GCACUGU__GCACUUUA
		_______\|\|.\|__\|\|\|\|\|.\|__\|\|\|\|\|\|\|\|
		_______UGGA__CGUGAUA__CGUGAAAU
(miRNA)	3'	______A_____________UU________	5'

UTR3

6mer

1101-1120

0.00179287183800578

Position on chromosome:

2:120735748-120735767

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	AUUUCAUAU__________CCCUA________	3'
		_________UUAUUU_CAU_______ACUUUA
		_________.\|\|..\|_\|\|._______\|\|\|\|\|\|
		_________GAUGGA_GUG_______UGAAAU
(miRNA)	3'	_______________C___AUAUUCG______	5'

UTR3

6mer

4067-4093

0.0014393511532653

Position on chromosome:

2:120738714-120738740

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GG______U____UUGUG____U_______	3'
		__CU_CUU_UAUU_____GUAG_UACUUUA
		__\|\|_\|.\|_.\|.\|_____.\|\|._.\|\|\|\|\|\|
		__GA_GGA_GUGA_____UAUU_GUGAAAU
(miRNA)	3'	____U___C_____________C_______	5'

UTR3

8mer

6483-6508

0.121008208569721

Position on chromosome:

2:120741130-120741155

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUU____A___UUAA____UU________	3'
		___UUUG_AUU____AUAG__GCACUUUA
		___..\|\|_\|.\|____\|\|\|.__\|\|\|\|\|\|\|\|
		___GGAC_UGA____UAUU__CGUGAAAU
(miRNA)	3'	__U____G_____________________	5'

ENSG00000139132 (FGD4)

hsa-miR-20a-5p

0.999999974060219

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

73-88

0.107827952808405

Position on chromosome:

12:32793541-32793556

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCUCUUCUUACAC______U______________	3'
		_____________AUCUGC______AGCACUUUA
		_____________\|.\|\|\|\|______\|\|\|\|\|\|\|\|\|
		_____________UGGACG______UCGUGAAAU
(miRNA)	3'	____________A______UGAUAU_________	5'

UTR3

6mer

1061-1078

0.00219896677240505

Position on chromosome:

12:32794529-32794546

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAAACAUUUUC___AAA__CCAA_________	3'
		___________ACC___AC_______ACUUUA
		___________\|\|\|___\|\|_______\|\|\|\|\|\|
		___________UGG___UG_______UGAAAU
(miRNA)	3'	__________A___ACG__AUAUUCG______	5'

UTR3

6mer

1401-1421

0.00300522446373845

Position on chromosome:

12:32794869-32794889

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2

Binding area:

(Transcript)	5'	ACUGUCA____CCAAA_______________U	3'
		_______UACC_____CAUUGU___CACUUU_
		_______\|\|\|\|_____\|\|.\|.\|___\|\|\|\|\|\|_
		_______AUGG_____GUGAUA___GUGAAA_
(miRNA)	3'	______G____AC_________UUC______U	5'

UTR3

6mer

1525-1546

0.00105838171474446

Position on chromosome:

12:32794993-32795014

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACACAU_____CAG__C______________	3'
		_______UUAUU___GC_UUGU___UACUUUA
		_______.\|\|..___\|\|_.\|.\|___.\|\|\|\|\|\|
		_______GAUGG___CG_GAUA___GUGAAAU
(miRNA)	3'	____________A____U____UUC_______	5'

UTR3

6mer

1986-2003

0.00132869577837904

Position on chromosome:

12:32795454-32795471

Conserved species:

panTro2,canFam2

Binding area:

(Transcript)	5'	AUUUUUAAAA___AG_____ACUA______C	3'
		__________GCA____AAG____CACUUU_
		__________\|\|\|____\|\|\|____\|\|\|\|\|\|_
		__________CGU____UUC____GUGAAA_
(miRNA)	3'	_________A___GAUA_____________U	5'

UTR3

6mer

2185-2208

0.0018354736820143

Position on chromosome:

12:32795653-32795676

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CUGG___U__GGU___C___UU______C	3'
		____UUA_CC___CAC_AUA__CACUUU_
		____.\|\|_\|\|___\|\|\|_\|\|\|__\|\|\|\|\|\|_
		____GAU_GG___GUG_UAU__GUGAAA_
(miRNA)	3'	__________AC____A___UC______U	5'

UTR3

6mer

2538-2553

0.00125585323465496

Position on chromosome:

12:32796006-32796021

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCUUUAAAGUGCC__U___C__A_____________	3'
		_____________CU_CCU_CA________ACUUUA
		_____________\|\|_\|\|\|_\|\|________\|\|\|\|\|\|
		_____________GA_GGA_GU________UGAAAU
(miRNA)	3'	_______________U___C__GAUAUUCG______	5'

UTR3

6mer

2926-2948

0.00219071717323852

Position on chromosome:

12:32796394-32796416

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAUAA_____AAGAA____UU__________	3'
		______CUAUC_____CAUU_____UACUUUA
		______\|\|\|.\|_____\|\|.\|_____.\|\|\|\|\|\|
		______GAUGG_____GUGA_____GUGAAAU
(miRNA)	3'	___________AC_______UAUUC_______	5'

UTR3

6mer

4570-4587

0.00300044358540317

Position on chromosome:

12:32798038-32798055

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAAAUCAAGAA________AUCA_________	3'
		___________AUCU_CAU______UACUUUA
		___________\|.\|\|_\|\|.______.\|\|\|\|\|\|
		___________UGGA_GUG______GUGAAAU
(miRNA)	3'	__________A____C___AUAUUC_______	5'

UTR3

8mer

4996-5017

0.00670514849484531

Position on chromosome:

12:32798464-32798485

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAGCCCA________AUCCC_________	3'
		_______UGCCUGUA_____AGCACUUUG
		_______\|.\|\|\|\|.\|_____\|\|\|\|\|\|\|\|.
		_______AUGGACGU_____UCGUGAAAU
(miRNA)	3'	______G________GAUAU_________	5'

UTR3

9mer

5441-5460

0.165786670348333

Position on chromosome:

12:32798909-32798928

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUGGAAACA_____AAAU___________	3'
		_________UUGUA____UAAGCACUUUA
		_________.\|\|.\|____\|\|\|\|\|\|\|\|\|\|\|
		_________GACGU____AUUCGUGAAAU
(miRNA)	3'	________G_____GAU____________	5'

ENSG00000172058 (SERF1A)

hsa-miR-20a-5p

0.999999856927801

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

165-186

0.0937741005437709

Position on chromosome:

5:70213150-70213171

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGAAA__UAGA____A__U__________U	3'
		______CU____UGUA_CU___AGCACUUU_
		______\|\|____\|\|.\|_\|\|___\|\|\|\|\|\|\|\|_
		______GA____ACGU_GA___UCGUGAAA_
(miRNA)	3'	________UGG________UAU________U	5'

UTR3

9mer

645-663

0.162079358260558

Position on chromosome:

5:70213630-70213648

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACAGCCCCCG___AUA___U___________	3'
		__________GCC___AUU___AGCACUUUA
		__________.\|\|___\|.\|___\|\|\|\|\|\|\|\|\|
		__________UGG___UGA___UCGUGAAAU
(miRNA)	3'	_________A___ACG___UAU_________	5'

UTR3

8mer

702-723

0.0124316016714799

Position on chromosome:

5:70213687-70213708

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGGCUCA________AUC___________	3'
		_______UGCCUGUA___UGAGCACUUUG
		_______\|.\|\|\|\|.\|___\|.\|\|\|\|\|\|\|\|.
		_______AUGGACGU___AUUCGUGAAAU
(miRNA)	3'	______G________GAU___________	5'

ENSG00000116095 (PLEKHA3)

hsa-miR-20a-5p

0.999999767314266

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

85-104

0.129430861764635

Position on chromosome:

2:179368700-179368719

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AGUUUUUUC___UA_G___CU__________	3'
		_________CCU__G_ACU____GCACUUUA
		_________\|\|\|__\|_\|\|\|____\|\|\|\|\|\|\|\|
		_________GGA__C_UGA____CGUGAAAU
(miRNA)	3'	________U______G___UAUU________	5'

UTR3

7mer

398-422

0.0111745052005043

Position on chromosome:

2:179369013-179369037

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	CUUG____A__G__CAA____U_______	3'
		____UGCC_UG_AC___AUGG_CACUUUA
		____\|.\|\|_\|\|_\|\|___\|\|.._\|\|\|\|\|\|\|
		____AUGG_AC_UG___UAUU_GUGAAAU
(miRNA)	3'	___G_______G__A______C_______	5'

UTR3

9mer

1082-1101

0.0561963810538732

Position on chromosome:

2:179369697-179369716

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	GUUUAAGGU____G__AAG__________	3'
		_________UUUG_AU___GAGCACUUUA
		_________..\|\|_\|.___.\|\|\|\|\|\|\|\|\|
		_________GGAC_UG___UUCGUGAAAU
(miRNA)	3'	________U____G__AUA__________	5'

UTR3

6mer

2242-2266

0.00155902134284383

Position on chromosome:

2:179370857-179370881

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUA_____U__AG____UCUA_______	3'
		____GCUUG_CA__UUGU____UACUUUA
		____.\|.\|\|_\|\|__.\|.\|____.\|\|\|\|\|\|
		____UGGAC_GU__GAUA____GUGAAAU
(miRNA)	3'	___A______________UUC________	5'

UTR3

6mer

3302-3330

0.00130059074704735

Position on chromosome:

2:179371917-179371945

Conserved species:

panTro2

Binding area:

(Transcript)	5'	_____U_______GU__ACAGGAUU_______	3'
		_ACCU___UUAUG__AG________UACUUUA
		_\|\|\|\|___.\|\|\|.__\|\|________.\|\|\|\|\|\|
		_UGGA___GAUAU__UC________GUGAAAU
(miRNA)	3'	A____CGU________________________	5'

UTR3

6mer

6373-6391

0.00206601789343237

Position on chromosome:

2:179374988-179375006

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	AAGAAAUCCA___A_________U_______	3'
		__________AUC___GUUAUAG_UACUUUA
		__________\|.\|___..\|\|\|\|._.\|\|\|\|\|\|
		__________UGG___UGAUAUU_GUGAAAU
(miRNA)	3'	_________A___ACG_______C_______	5'

UTR3

6mer

8533-8545

0.00175417595405749

Position on chromosome:

2:179377148-179377160

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGACUAUAAUGAAUU___U____U__________U	3'
		_______________CCU___CU_____CACUUU_
		_______________\|\|\|___\|\|_____\|\|\|\|\|\|_
		_______________GGA___GA_____GUGAAA_
(miRNA)	3'	______________U___CGU__UAUUC______U	5'

UTR3

7mer

9139-9150

0.00506878488597828

Position on chromosome:

2:179377754-179377765

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGGUGGUUAAAUAAA__G____________U	3'
		________________CA_U___GGCACUUU_
		________________\|\|_\|___.\|\|\|\|\|\|\|_
		________________GU_A___UCGUGAAA_
(miRNA)	3'	_______________C__G_UAU________U	5'

UTR3

6mer

10606-10634

0.00230446054337008

Position on chromosome:

2:179379221-179379249

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	___A___CU____UUCAUACAUA_______	3'
		_UG_ACU__UAAG__________UACUUUA
		_\|\|_\|\|\|__\|\|\|\|__________.\|\|\|\|\|\|
		_AC_UGA__AUUC__________GUGAAAU
(miRNA)	3'	G__G___U______________________	5'

UTR3

6mer

10853-10868

0.00127320282977883

Position on chromosome:

2:179379468-179379483

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAUAUCAGUGCU_______________U______U	3'
		____________UUACCU______UAG_CACUUU_
		____________.\|\|\|\|\|______\|\|._\|\|\|\|\|\|_
		____________GAUGGA______AUU_GUGAAA_
(miRNA)	3'	__________________CGUGAU___C______U	5'

UTR3

7mer

11532-11559

0.0109298101665252

Position on chromosome:

2:179380147-179380174

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U______UUUUAAA___U__UU_______	3'
		_CUACCU_______AUU_UA__CACUUUA
		_\|\|\|\|\|\|_______\|.\|_\|\|__\|\|\|\|\|\|\|
		_GAUGGA_______UGA_AU__GUGAAAU
(miRNA)	3'	_______CG________U__UC_______	5'

UTR3

6mer

11912-11935

0.00447747422205037

Position on chromosome:

2:179380527-179380550

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	AUAA___G__UUC__AA__UUU______U	3'
		____UUG_CU___CA__AU___CACUUU_
		____.\|._\|\|___\|\|__\|\|___\|\|\|\|\|\|_
		____GAU_GA___GU__UA___GUGAAA_
(miRNA)	3'	_______G__C____GA__UUC______U	5'

UTR3

7mer

12352-12372

0.0328010660384648

Position on chromosome:

2:179380967-179380987

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GAUUUUGA_UG__AUA____AA_________	3'
		________U__CU___ACUA____CACUUUA
		________\|__\|\|___\|\|\|\|____\|\|\|\|\|\|\|
		________A__GA___UGAU____GUGAAAU
(miRNA)	3'	_______G_UG__CG_____AUUC_______	5'

ENSG00000118762 (PKD2)

hsa-miR-20a-5p

0.99999972152814

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

113-138

0.132534084683858

Position on chromosome:

4:88996960-88996985

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GUG___GAU___UAAU__UCU_________	3'
		___ACC___UGC____CU____GCACUUUA
		___\|\|\|___\|\|\|____\|\|____\|\|\|\|\|\|\|\|
		___UGG___ACG____GA____CGUGAAAU
(miRNA)	3'	__A_________U_____UAUU________	5'

UTR3

6mer

131-159

0.00488401886666924

Position on chromosome:

4:88996978-88997006

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	______UUAAUUUAUUUU___UAA______	3'
		_GCACU____________AUA___ACUUUA
		_\|\|\|\|\|____________\|\|\|___\|\|\|\|\|\|
		_CGUGA____________UAU___UGAAAU
(miRNA)	3'	A____________________UCG______	5'

UTR3

8mer

1024-1049

0.00373302423449845

Position on chromosome:

4:88997871-88997896

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CGG__CAC_______AUCCC_________	3'
		___CU___GCCUGUA_____AGCACUUUG
		___\|\|___.\|\|\|\|.\|_____\|\|\|\|\|\|\|\|.
		___GA___UGGACGU_____UCGUGAAAU
(miRNA)	3'	_______________GAUAU_________	5'

UTR3

9mer

2032-2053

0.116249388952339

Position on chromosome:

4:88998879-88998900

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUAUUA__G____AUAC___________	3'
		_______AU_UGUA____UGAGCACUUUA
		_______\|._\|\|.\|____\|.\|\|\|\|\|\|\|\|\|
		_______UG_ACGU____AUUCGUGAAAU
(miRNA)	3'	______A__G____GAU____________	5'

ENSG00000114098 (ARMC8)

hsa-miR-20a-5p

0.999999383598166

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

470-493

0.00628460033157465

Position on chromosome:

3:138015205-138015228

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAGCA________UG_____AAA______	3'
		_____UUGCUUGC__UAUAA___ACUUUA
		_____.\|.\|.\|\|\|__\|\|\|\|\|___\|\|\|\|\|\|
		_____GAUGGACG__AUAUU___UGAAAU
(miRNA)	3'	_____________UG_____CG_______	5'

UTR3

6mer

2039-2064

0.00613146187528637

Position on chromosome:

3:138016774-138016799

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AG___AAG__C_A____AAUAA______C	3'
		__CUG___GC_C_AUGA_____CACUUU_
		__\|\|.___\|\|_\|_\|\|.\|_____\|\|\|\|\|\|_
		__GAU___CG_G_UAUU_____GUGAAA_
(miRNA)	3'	_____GGA__U_A____C__________U	5'

UTR3

9mer

2374-2401

0.231997839519059

Position on chromosome:

3:138017109-138017136

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	G_______UUUUUUUCUU___________	3'
		_UUGCAUU__________UAAGCACUUUA
		_.\|\|\|\|.\|__________\|\|\|\|\|\|\|\|\|\|\|
		_GACGUGA__________AUUCGUGAAAU
(miRNA)	3'	G_______U____________________	5'

ENSG00000130150 (MOSPD2)

hsa-miR-20a-5p

0.999998835698585

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1309-1333

0.00275791956484776

Position on chromosome:

X:14939241-14939265

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,echTel1

Binding area:

(Transcript)	5'	UAUG___G______A____CAUC_______	3'
		____UUG_UU_CAC_UGUA____UACUUUA
		____.\|._.\|_\|\|\|_\|.\|\|____.\|\|\|\|\|\|
		____GAU_GA_GUG_AUAU____GUGAAAU
(miRNA)	3'	_______G__C________UC_________	5'

UTR3

9mer

2284-2307

0.231261589399587

Position on chromosome:

X:14940216-14940239

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UAAUU___A___G___UAAU_________	3'
		_____UUG_CUG_AUU____AGCACUUUA
		_____.\|._\|\|\|_\|.\|____\|\|\|\|\|\|\|\|\|
		_____GAU_GAC_UGA____UCGUGAAAU
(miRNA)	3'	________G___G___UAU__________	5'

ENSG00000138623 (SEMA7A)

hsa-miR-20a-5p

0.999998421540675

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

39-64

0.229045580640216

Position on chromosome:

15:74701669-74701694

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GCC_______CUCUUCUCAAU________	3'
		___CCUGCAC___________GCACUUUA
		___\|\|\|\|\|\|\|___________\|\|\|\|\|\|\|\|
		___GGACGUG___________CGUGAAAU
(miRNA)	3'	__U_______AUAUU______________	5'

ENSG00000146360 (GPR6)

hsa-miR-20a-5p

0.999998323904968

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

162-177

0.0286553663484103

Position on chromosome:

6:110301567-110301582

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	CAAGGACAAAGAG______U______________	3'
		_____________GCUUGU______GGCACUUUA
		_____________.\|.\|\|.______.\|\|\|\|\|\|\|\|
		_____________UGGACG______UCGUGAAAU
(miRNA)	3'	____________A______UGAUAU_________	5'

UTR3

9mer

336-356

0.21527511798618

Position on chromosome:

6:110301741-110301761

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UUCCAAUA______A________________	3'
		________CUGCUU__AUUAU_AGCACUUUA
		________\|\|.\|.\|__\|.\|\|\|_\|\|\|\|\|\|\|\|\|
		________GAUGGA__UGAUA_UCGUGAAAU
(miRNA)	3'	______________CG_____U_________	5'

UTR3

7mer

370-387

0.0132130660139149

Position on chromosome:

6:110300686-110300703

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GGCGGGCUGUG_______U__U___________	3'
		___________GCCU_CA_CU____GCACUUUG
		___________.\|\|\|_\|\|_\|\|____\|\|\|\|\|\|\|.
		___________UGGA_GU_GA____CGUGAAAU
(miRNA)	3'	__________A____C_____UAUU________	5'

UTR3

7mer

840-862

0.0032325205549278

Position on chromosome:

6:110301156-110301178

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUACA___G____GG__C__________C	3'
		_____CUG_CUGU__UG_UGGGCACUUU_
		_____\|\|._\|\|\|.__\|._\|..\|\|\|\|\|\|\|_
		_____GAU_GACG__AU_AUUCGUGAAA_
(miRNA)	3'	________G____UG_____________U	5'

ENSG00000177570 (SAMD12)

hsa-miR-20a-5p

0.999997295654866

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

7722-7744

0.183940908982553

Position on chromosome:

8:119209420-119209442

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GGUAUA_____CA____CU___________	3'
		______CUGUC___ACU__UAAGCACUUUA
		______\|\|..\|___\|\|\|__\|\|\|\|\|\|\|\|\|\|\|
		______GAUGG___UGA__AUUCGUGAAAU
(miRNA)	3'	___________ACG___U____________	5'

UTR3

6mer

7511-7531

0.00327286438443234

Position on chromosome:

8:119209209-119209229

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	ACUGUUAG________CUCC__A_______	3'
		________ACUU_CAC____AG_UACUUUA
		________\|\|.\|_\|\|\|____\|\|_.\|\|\|\|\|\|
		________UGGA_GUG____UC_GUGAAAU
(miRNA)	3'	_______A____C___AUAU__________	5'

UTR3

9mer

4550-4568

0.0094931369880388

Position on chromosome:

8:119206248-119206266

Conserved species:

oryCun2

Binding area:

(Transcript)	5'	AAGUUUUUAA____CC____U___________	3'
		__________UACC__C_CU___AGCACUUUA
		__________\|\|\|\|__\|_\|\|___\|\|\|\|\|\|\|\|\|
		__________AUGG__G_GA___UCGUGAAAU
(miRNA)	3'	_________G____AC_U__UAU_________	5'

UTR3

7mer

4333-4347

0.00611665021511889

Position on chromosome:

8:119206031-119206045

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUCCCACAGCCC___C_______________U	3'
		_____________CCU_CACU____GCACUUU_
		_____________\|\|\|_\|\|\|\|____\|\|\|\|\|\|\|_
		_____________GGA_GUGA____CGUGAAA_
(miRNA)	3'	____________U___C____UAUU_______U	5'

UTR3

6mer

1047-1065

0.00347230467194034

Position on chromosome:

8:119202745-119202763

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	CGCACACAC__ACA___ACACA_______U	3'
		_________AC___CAC______CACUUU_
		_________\|\|___\|\|\|______\|\|\|\|\|\|_
		_________UG___GUG______GUGAAA_
(miRNA)	3'	________A__GAC___AUAUUC______U	5'

UTR3

7mer

387-410

0.0139499422968624

Position on chromosome:

8:119202085-119202108

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AGUGC__UU_____UGG___UC_______	3'
		_____CU__UCUGU___AUA__CACUUUA
		_____\|\|__.\|\|\|.___\|\|\|__\|\|\|\|\|\|\|
		_____GA__GGACG___UAU__GUGAAAU
(miRNA)	3'	_______U______UGA___UC_______	5'

ENSG00000133740 (E2F5)

hsa-miR-20a-5p

0.999996203792688

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

493-514

0.204351726565028

Position on chromosome:

8:86126591-86126612

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUGAAG_____U_UG_UUU_________	3'
		_______UGCCU_C__U___AGCACUUUA
		_______\|.\|\|\|_\|__\|___\|\|\|\|\|\|\|\|\|
		_______AUGGA_G__A___UCGUGAAAU
(miRNA)	3'	______G_____C_UG_UAU_________	5'

UTR3

6mer

535-552

0.0103511317489885

Position on chromosome:

8:86126633-86126650

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUUUUGUUGA_______A____C__________C	3'
		__________CU_UCUG_CAUU_____CACUUU_
		__________\|\|_.\|\|\|_\|\|.\|_____\|\|\|\|\|\|_
		__________GA_GGAC_GUGA_____GUGAAA_
(miRNA)	3'	____________U_________UAUUC______U	5'

ENSG00000107854 (TNKS2)

hsa-miR-20a-5p

0.999996094983091

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

191-210

0.207980719503123

Position on chromosome:

10:93622948-93622967

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UAAAUAUUU_____U__UUC_________	3'
		_________CCUGU_UU___AGCACUUUA
		_________\|\|\|\|._.\|___\|\|\|\|\|\|\|\|\|
		_________GGACG_GA___UCGUGAAAU
(miRNA)	3'	________U_____U__UAU_________	5'

UTR3

6mer

2089-2114

0.00626026320582439

Position on chromosome:

10:93624846-93624871

Conserved species:

panTro2,rheMac2,rn4,oryCun2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UAG___G______GAAAU___UU______	3'
		___UAC_UUGCAU_____AGC__ACUUUA
		___\|\|\|_.\|\|\|\|._____\|\|\|__\|\|\|\|\|\|
		___AUG_GACGUG_____UCG__UGAAAU
(miRNA)	3'	__G__________AUAU____________	5'

ENSG00000180998 (GPR137C)

hsa-miR-20a-5p

0.999994938820543

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

269-284

0.0388197076873875

Position on chromosome:

14:53102103-53102118

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGGAACAUCAAA_________U_______U	3'
		____________UGCA_UAUG_GCACUUU_
		____________\|\|\|\|_\|\|\|._\|\|\|\|\|\|\|_
		____________ACGU_AUAU_CGUGAAA_
(miRNA)	3'	___________G____G____U_______U	5'

UTR3

7mer

1239-1262

0.005781542354392

Position on chromosome:

14:53103073-53103096

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAUAA___AGA____U___AAU________	3'
		_____UAC____AUU_UAA___GCACUUUG
		_____\|\|\|____\|.\|_\|\|\|___\|\|\|\|\|\|\|.
		_____AUG____UGA_AUU___CGUGAAAU
(miRNA)	3'	____G___GACG___U______________	5'

UTR3

9mer

2143-2164

0.165401115686639

Position on chromosome:

14:53103977-53103998

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAAUU__AAA______G__________	3'
		_______CC___GCACUA_GAGCACUUUA
		_______\|\|___\|\|\|\|\|\|_.\|\|\|\|\|\|\|\|\|
		_______GG___CGUGAU_UUCGUGAAAU
(miRNA)	3'	______U__A________A__________	5'

ENSG00000105855 (ITGB8)

hsa-miR-20a-5p

0.999994060836274

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

216-237

0.143955314191485

Position on chromosome:

7:20449837-20449858

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUUGAGA___G_GU________________	3'
		_______CUA_U__CGUUGU_AGCACUUUA
		_______\|\|\|_.__\|..\|.\|_\|\|\|\|\|\|\|\|\|
		_______GAU_G__GUGAUA_UCGUGAAAU
(miRNA)	3'	__________G_AC______U_________	5'

UTR3

7mer

282-305

0.023054362283501

Position on chromosome:

7:20449903-20449926

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUCCU___AAGA______AUUA_______	3'
		_____CUG____GCACUG____CACUUUA
		_____\|\|.____\|\|\|\|\|.____\|\|\|\|\|\|\|
		_____GAU____CGUGAU____GUGAAAU
(miRNA)	3'	________GGA_______AUUC_______	5'

UTR3

7mer

745-766

0.0150132139020007

Position on chromosome:

7:20450366-20450387

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAAAAAA___AUAA___A___U________	3'
		_______CUA____UAC_AUG__CACUUUA
		_______\|\|\|____.\|\|_\|\|.__\|\|\|\|\|\|\|
		_______GAU____GUG_UAU__GUGAAAU
(miRNA)	3'	__________GGAC___A___UC_______	5'

UTR3

8mer

2196-2215

0.00710295339151084

Position on chromosome:

7:20451817-20451836

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUAGAUGU___C___AGCC_________C	3'
		________CCU_UAC____AAGCACUUU_
		________\|\|\|_.\|\|____\|\|\|\|\|\|\|\|\|_
		________GGA_GUG____UUCGUGAAA_
(miRNA)	3'	_______U___C___AUA__________U	5'

UTR3

6mer

2565-2582

0.00120770708964835

Position on chromosome:

7:20452186-20452203

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAUACCCUCAC_______________________	3'
		___________UUGUUUGCACUA_____ACUUUA
		___________.\|...\|\|\|\|\|\|\|_____\|\|\|\|\|\|
		___________GAUGGACGUGAU_____UGAAAU
(miRNA)	3'	_______________________AUUCG______	5'

UTR3

6mer

2960-2975

0.00241956257177736

Position on chromosome:

7:20452581-20452596

Conserved species:

rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	ACAGAAUUGAGA_____A__AA__________U	3'
		____________ACUUG_AC______CACUUU_
		____________\|\|.\|\|_\|\|______\|\|\|\|\|\|_
		____________UGGAC_UG______GUGAAA_
(miRNA)	3'	___________A_____G__AUAUUC______U	5'

UTR3

6mer

4028-4055

0.0017631284853612

Position on chromosome:

7:20453649-20453676

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	____________AUUCC___ACAU______U	3'
		_UAUUU_CAUUG_____AAG____CACUUU_
		_\|\|..\|_\|\|.\|._____\|\|\|____\|\|\|\|\|\|_
		_AUGGA_GUGAU_____UUC____GUGAAA_
(miRNA)	3'	G_____C_____A_________________U	5'

UTR3

6mer

4340-4355

0.00240138007705778

Position on chromosome:

7:20453961-20453976

Conserved species:

panTro2,rheMac2,canFam2,echTel1

Binding area:

(Transcript)	5'	AGCUCUUUCAGGU__C_____UA__________	3'
		_____________CC__CAUU_____UACUUUA
		_____________\|\|__\|\|.\|_____.\|\|\|\|\|\|
		_____________GG__GUGA_____GUGAAAU
(miRNA)	3'	____________U__AC____UAUUC_______	5'

UTR3

6mer

4464-4487

0.00255696195528868

Position on chromosome:

7:20454085-20454108

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,echTel1

Binding area:

(Transcript)	5'	AGAU___UUUA______CAUCU______U	3'
		____CCU____UAUUAU_____CACUUU_
		____\|\|\|____.\|.\|\|\|_____\|\|\|\|\|\|_
		____GGA____GUGAUA_____GUGAAA_
(miRNA)	3'	___U___C_________UUC________U	5'

UTR3

7mer

4670-4689

0.00791324559944004

Position on chromosome:

7:20454291-20454310

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUUUUCCC___UG___C___U_______	3'
		_________CCU__GCU_UGA_CACUUUA
		_________\|\|\|__.\|\|_\|.\|_\|\|\|\|\|\|\|
		_________GGA__UGA_AUU_GUGAAAU
(miRNA)	3'	________U___CG___U___C_______	5'

ENSG00000135631 (RAB11FIP5)

hsa-miR-20a-5p

0.999992061005904

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1776-1797

0.00621712537230354

Position on chromosome:

2:73302286-73302307

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GACAAGA___G____U________ACAU______	3'
		_______CUG_UUGC______AGC____ACUUUA
		_______\|\|._.\|\|\|______\|\|\|____\|\|\|\|\|\|
		_______GAU_GACG______UCG____UGAAAU
(miRNA)	3'	__________G____UGAUAU_____________	5'

UTR3

7mer

746-773

0.0135138256472143

Position on chromosome:

2:73301256-73301283

Conserved species:

rheMac2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	C_______GCUUG____CAGU________	3'
		_UUGCCUG_____GCUG____GCACUUUG
		_.\|.\|\|\|\|_____.\|\|.____\|\|\|\|\|\|\|.
		_GAUGGAC_____UGAU____CGUGAAAU
(miRNA)	3'	________G________AUU_________	5'

UTR3

9mer

27-53

0.182913533418756

Position on chromosome:

2:73300537-73300563

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AG__UGU___U___GUUU___________	3'
		__CU___UCU_CAU____UAAGCACUUUA
		__\|\|___.\|\|_\|\|.____\|\|\|\|\|\|\|\|\|\|\|
		__GA___GGA_GUG____AUUCGUGAAAU
(miRNA)	3'	____U_____C___AU_____________	5'

ENSG00000169967 (MAP3K2)

hsa-miR-20a-5p

0.999991383336245

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

8778-8799

0.0309290922935018

Position on chromosome:

2:128065084-128065105

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCAUUC____U_UCU___ACU_______U	3'
		______ACCU_C___CUG___GCACUUU_
		______\|\|\|\|_\|___\|\|.___\|\|\|\|\|\|\|_
		______UGGA_G___GAU___CGUGAAA_
(miRNA)	3'	_____A____C_U_____AUU_______U	5'

UTR3

9mer

8577-8586

0.110681819737846

Position on chromosome:

2:128064883-128064892

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GAUGUGGUUCAGAGAGAUA__________	3'
		___________________AAGCACUUUA
		___________________\|\|\|\|\|\|\|\|\|\|
		___________________UUCGUGAAAU
(miRNA)	3'	__________________A__________	5'

UTR3

6mer

8379-8405

0.00326855046844804

Position on chromosome:

2:128064685-128064711

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UC______GGGGU_____CCUAA______	3'
		__AUUUGU_____UGAGC_____ACUUUA
		__\|..\|\|._____\|.\|\|\|_____\|\|\|\|\|\|
		__UGGACG_____AUUCG_____UGAAAU
(miRNA)	3'	_A______UGAU_________________	5'

UTR3

7mer

7340-7358

0.00447289252038501

Position on chromosome:

2:128063646-128063664

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UCAACAAACA___A_____CAAU_______	3'
		__________GCA__AUAG____CACUUUA
		__________\|\|\|__\|\|\|.____\|\|\|\|\|\|\|
		__________CGU__UAUU____GUGAAAU
(miRNA)	3'	_________A___GA____C__________	5'

UTR3

6mer

6285-6308

0.0021658710665572

Position on chromosome:

2:128062591-128062614

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AAGGC_____AAAAGAA____C__________	3'
		_____ACCUG_______ACUA____UACUUUA
		_____\|\|\|\|\|_______\|\|\|\|____.\|\|\|\|\|\|
		_____UGGAC_______UGAU____GUGAAAU
(miRNA)	3'	____A_____G__________AUUC_______	5'

UTR3

8mer

5501-5521

0.0103321734809675

Position on chromosome:

2:128061807-128061827

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2

Binding area:

(Transcript)	5'	UGAAUAU____AAA___UUC________U	3'
		_______CUUG___AUU___AGCACUUU_
		_______\|.\|\|___\|.\|___\|\|\|\|\|\|\|\|_
		_______GGAC___UGA___UCGUGAAA_
(miRNA)	3'	______U____G_____UAU________U	5'

UTR3

6mer

4564-4590

0.0015462860682113

Position on chromosome:

2:128060870-128060896

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AG_____CUU_______AAAACA_______	3'
		__UGUCU___UUA_AAG______UACUUUA
		__\|..\|\|___.\|\|_\|\|\|______.\|\|\|\|\|\|
		__AUGGA___GAU_UUC______GUGAAAU
(miRNA)	3'	_G_____CGU___A________________	5'

UTR3

7mer

2847-2870

0.0174859958312883

Position on chromosome:

2:128059153-128059176

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	ACACA___________C__AAU_______	3'
		_____AUCUGUAUUAU_AG___CACUUUA
		_____\|.\|\|\|.\|.\|\|\|_\|\|___\|\|\|\|\|\|\|
		_____UGGACGUGAUA_UC___GUGAAAU
(miRNA)	3'	____A___________U____________	5'

UTR3

8mer

2290-2305

0.0204230361512044

Position on chromosome:

2:128058596-128058611

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGUUCAUGACCA______AA_____________U	3'
		____________UACC_G______AAGCACUUU_
		____________\|\|\|\|_\|______\|\|\|\|\|\|\|\|\|_
		____________AUGG_C______UUCGUGAAA_
(miRNA)	3'	___________G____A_GUGAUA_________U	5'

ENSG00000116106 (EPHA4)

hsa-miR-20a-5p

0.999990622323674

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3285-3305

0.152636181140738

Position on chromosome:

2:222290690-222290710

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	AAAUUAGU__________CCAU_________	3'
		________UUACCU_CAU_____GCACUUUA
		________.\|\|\|\|\|_\|\|._____\|\|\|\|\|\|\|\|
		________GAUGGA_GUG_____CGUGAAAU
(miRNA)	3'	______________C___AUAUU________	5'

UTR3

7mer

3267-3293

0.0365246246712378

Position on chromosome:

2:222290672-222290698

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	A______U___UUGAAGAACU_______U	3'
		_UGCACU_UAA__________GCACUUU_
		_\|\|\|\|\|\|_\|\|\|__________\|\|\|\|\|\|\|_
		_ACGUGA_AUU__________CGUGAAA_
(miRNA)	3'	G______U____________________U	5'

UTR3

6mer

2625-2642

0.00232910621863146

Position on chromosome:

2:222290030-222290047

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GCCAUAUAAAG________U___________	3'
		___________UCU_UAUU_UGGG_ACUUUA
		___________.\|\|_.\|.\|_\|..\|_\|\|\|\|\|\|
		___________GGA_GUGA_AUUC_UGAAAU
(miRNA)	3'	__________U___C____U____G______	5'

UTR3

6mer

127-145

0.00843253877621936

Position on chromosome:

2:222282876-222282894

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AGGUAUUUUU__UC___U___GA___________	3'
		__________CU__CCU_CAU_______ACUUUA
		__________\|\|__\|\|\|_\|\|._______\|\|\|\|\|\|
		__________GA__GGA_GUG_______UGAAAU
(miRNA)	3'	____________U____C___AUAUUCG______	5'

ENSG00000108799 (EZH1)

hsa-miR-20a-5p

0.999986914506252

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1028-1046

0.0557459649791204

Position on chromosome:

17:40853321-40853339

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CUGGCAUUCA___AGA_________________	3'
		__________UGC___GCA____AAGCACUUUA
		__________\|.\|___\|\|\|____\|\|\|\|\|\|\|\|\|\|
		__________AUG___CGU____UUCGUGAAAU
(miRNA)	3'	_________G___GA____GAUA__________	5'

UTR3

6mer

158-175

0.00490951724384249

Position on chromosome:

17:40852451-40852468

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	AUCCUUUGUC_____UG_CCCC_______U	3'
		__________CCUGC__U_____CACUUU_
		__________\|\|\|\|\|__\|_____\|\|\|\|\|\|_
		__________GGACG__A_____GUGAAA_
(miRNA)	3'	_________U_____UG_UAUUC______U	5'

UTR3

8mer

43-67

0.133821557194535

Position on chromosome:

17:40852336-40852360

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUCA_____AAUAA___UCAU________	3'
		____UUGCC_____AUU____GCACUUUA
		____.\|.\|\|_____\|.\|____\|\|\|\|\|\|\|\|
		____GAUGG_____UGA____CGUGAAAU
(miRNA)	3'	_________ACG_____UAUU________	5'

ENSG00000174136 (RGMB)

hsa-miR-20a-5p

0.999986801170731

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

252-271

0.184831904891634

Position on chromosome:

5:98129710-98129729

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,danRer6

Binding area:

(Transcript)	5'	UGCCCAGGG______UAGA___________	3'
		_________ACCUGU_____AAGCACUUUA
		_________\|\|\|\|\|._____\|\|\|\|\|\|\|\|\|\|
		_________UGGACG_____UUCGUGAAAU
(miRNA)	3'	________A______UGAUA__________	5'

UTR3

6mer

2675-2696

0.00950418465989122

Position on chromosome:

5:98132133-98132154

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CAGUGAG_G____G____UAAA_______	3'
		_______U_UGCA_UGUG____UACUUUA
		_______._\|\|\|\|_\|.\|.____.\|\|\|\|\|\|
		_______G_ACGU_AUAU____GUGAAAU
(miRNA)	3'	______U_G____G____UC_________	5'

ENSG00000205572 (SERF1B)

hsa-miR-20a-5p

0.999981564362771

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

165-186

0.0709552911945033

Position on chromosome:

5:69337733-69337754

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGAAA__UAGA____A__U__________U	3'
		______CU____UGUA_CU___AGCACUUU_
		______\|\|____\|\|.\|_\|\|___\|\|\|\|\|\|\|\|_
		______GA____ACGU_GA___UCGUGAAA_
(miRNA)	3'	________UGG________UAU________U	5'

UTR3

9mer

645-663

0.10893648931872

Position on chromosome:

5:69338213-69338231

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACAGCCCCCG___AUA___U___________	3'
		__________GCC___AUU___AGCACUUUA
		__________.\|\|___\|.\|___\|\|\|\|\|\|\|\|\|
		__________UGG___UGA___UCGUGAAAU
(miRNA)	3'	_________A___ACG___UAU_________	5'

UTR3

8mer

702-723

0.00898277059747575

Position on chromosome:

5:69338270-69338291

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGGCUCA________AUC___________	3'
		_______UGCCUGUA___UGAGCACUUUG
		_______\|.\|\|\|\|.\|___\|.\|\|\|\|\|\|\|\|.
		_______AUGGACGU___AUUCGUGAAAU
(miRNA)	3'	______G________GAU___________	5'

ENSG00000084093 (REST)

hsa-miR-20a-5p

0.999979495015564

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

313-333

0.0168115978502571

Position on chromosome:

4:57798632-57798652

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,echTel1

Binding area:

(Transcript)	5'	UCCAUGUC______U______UU________	3'
		________UUAUCU_C_CUGU___CACUUUA
		________.\|\|.\|\|_\|_\|\|.\|___\|\|\|\|\|\|\|
		________GAUGGA_G_GAUA___GUGAAAU
(miRNA)	3'	______________C_U____UUC_______	5'

UTR3

9mer

404-432

0.137632292126522

Position on chromosome:

4:57798723-57798751

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	________U_____UAAAGUU_________	3'
		_UGCCUGC_UUAUA_______AGCACUUUA
		_\|.\|\|\|\|\|_.\|\|\|\|_______\|\|\|\|\|\|\|\|\|
		_AUGGACG_GAUAU_______UCGUGAAAU
(miRNA)	3'	G_______U_____________________	5'

UTR3

7mer

703-720

0.0181938541677796

Position on chromosome:

4:57799022-57799039

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UAGCAUUUGUG___A__A____________	3'
		___________UUG_AC_GUAA_CACUUUA
		___________.\|\|_\|\|_.\|\|\|_\|\|\|\|\|\|\|
		___________GAC_UG_UAUU_GUGAAAU
(miRNA)	3'	__________G___G__A____C_______	5'

UTR3

7mer

1481-1506

0.00541312332169307

Position on chromosome:

4:57799800-57799825

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UAU____GUGUUC_____AG_________	3'
		___CCUG______CUAUG__GGCACUUUG
		___\|\|\|\|______\|\|\|\|.__.\|\|\|\|\|\|\|.
		___GGAC______GAUAU__UCGUGAAAU
(miRNA)	3'	__U____GU____________________	5'

UTR3

7mer

1672-1695

0.00908494116325084

Position on chromosome:

4:57799991-57800014

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CCAUA________U___AAA___C_______	3'
		_____CU_CC_GU_UUG___UAA_CACUUUA
		_____\|\|_\|\|_\|._.\|.___\|\|\|_\|\|\|\|\|\|\|
		_____GA_GG_CG_GAU___AUU_GUGAAAU
(miRNA)	3'	_______U__A__U_________C_______	5'

ENSG00000165125 (TRPV6)

hsa-miR-20a-5p

0.999979315785065

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

212-234

0.186993566819679

Position on chromosome:

7:142569168-142569190

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	ACAGGA__A______GUCA__________	3'
		______GC_CUGCAU____GAGCACUUUA
		______.\|_\|\|\|\|\|.____.\|\|\|\|\|\|\|\|\|
		______UG_GACGUG____UUCGUGAAAU
(miRNA)	3'	_____A_________AUA___________	5'

ENSG00000124201 (ZNFX1)

hsa-miR-20a-5p

0.999978025951505

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1229-1254

0.00852989440519812

Position on chromosome:

20:47863663-47863688

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGG__UAC_______AUCCC_________	3'
		___CU___GCCUGUA_____AGCACUUUG
		___\|\|___.\|\|\|\|.\|_____\|\|\|\|\|\|\|\|.
		___GA___UGGACGU_____UCGUGAAAU
(miRNA)	3'	_______________GAUAU_________	5'

UTR3

6mer

935-955

0.00904474189066843

Position on chromosome:

20:47863369-47863389

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCUUAGC______________GAUC______U	3'
		_______ACCU__ACU_UAAG____CACUUU_
		_______\|\|\|\|__\|\|\|_\|\|\|\|____\|\|\|\|\|\|_
		_______UGGA__UGA_AUUC____GUGAAA_
(miRNA)	3'	______A____CG___U______________U	5'

UTR3

7mer

384-405

0.00855720738561041

Position on chromosome:

20:47862818-47862839

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GUGACCC__UU______ACCU__________	3'
		_______CU__CCUGUA______GCACUUUG
		_______\|\|__\|\|\|\|.\|______\|\|\|\|\|\|\|.
		_______GA__GGACGU______CGUGAAAU
(miRNA)	3'	_________U_______GAUAUU________	5'

UTR3

8mer

39-59

0.163696842817167

Position on chromosome:

20:47862473-47862493

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCCUUUUU______U________________	3'
		________UUGUCU_UACUAU__GCACUUUA
		________.\|..\|\|_.\|\|\|\|\|__\|\|\|\|\|\|\|\|
		________GAUGGA_GUGAUA__CGUGAAAU
(miRNA)	3'	______________C______UU________	5'

UTR3

7mer

4815-4830

0.00566710094397662

Position on chromosome:

20:47887407-47887422

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGCAGGAAAAGAG___AGA___________	3'
		_____________GCG____GGGCACUUUG
		_____________\|\|.____..\|\|\|\|\|\|\|.
		_____________CGU____UUCGUGAAAU
(miRNA)	3'	____________A___GAUA__________	5'

ENSG00000136141 (LRCH1)

hsa-miR-20a-5p

0.999976282664284

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

155-183

0.0038814851295384

Position on chromosome:

13:47324941-47324969

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	______UUCAGA____ACCUCCG______	3'
		CUACCU______GCUG_______ACUUUA
		\|\|\|\|\|\|______.\|\|._______\|\|\|\|\|\|
		GAUGGA______UGAU_______UGAAAU
(miRNA)	3'	______CG________AUUCG________	5'

UTR3

7mer

555-580

0.027603806145789

Position on chromosome:

13:47325341-47325366

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UUA______UU_______UUAAA_______	3'
		___CUGCUU___UUGUGG_____CACUUUA
		___\|\|.\|.\|___.\|.\|.._____\|\|\|\|\|\|\|
		___GAUGGA___GAUAUU_____GUGAAAU
(miRNA)	3'	_________CGU______C___________	5'

UTR3

6mer

708-732

0.00299116175745777

Position on chromosome:

13:47325494-47325518

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUUU___GGGAG___A___UGA_______	3'
		____CUG_____GCA_UAU___CACUUUG
		____\|\|._____\|\|\|_\|\|\|___\|\|\|\|\|\|.
		____GAU_____CGU_AUA___GUGAAAU
(miRNA)	3'	_______GGA_____G___UUC_______	5'

UTR3

7mer

1588-1610

0.00983726994471373

Position on chromosome:

13:47326374-47326396

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	UAAGU_____GAAU____ACU_______C	3'
		_____CUUGU____GCUG___GCACUUU_
		_____\|.\|\|.____.\|\|.___\|\|\|\|\|\|\|_
		_____GGACG____UGAU___CGUGAAA_
(miRNA)	3'	____U_____________AUU_______U	5'

UTR3

8mer

1835-1858

0.140443363347293

Position on chromosome:

13:47326621-47326644

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUUUC_____AGA__________________	3'
		_____CUAUC___UGUACUGU__GCACUUUA
		_____\|\|\|.\|___\|\|.\|\|\|.\|__\|\|\|\|\|\|\|\|
		_____GAUGG___ACGUGAUA__CGUGAAAU
(miRNA)	3'	_____________________UU________	5'

ENSG00000048405 (ZNF800)

hsa-miR-20a-5p

0.999976195002294

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1565-1591

0.0476577683676339

Position on chromosome:

7:127011662-127011688

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	U___AGGCA_________UCC________C	3'
		_CUA_____CUGC_CUAU___AGCACUUU_
		_\|\|\|_____\|\|\|\|_\|\|\|\|___\|\|\|\|\|\|\|\|_
		_GAU_____GACG_GAUA___UCGUGAAA_
(miRNA)	3'	____G________U____U__________U	5'

UTR3

9mer

1039-1064

0.116136985004095

Position on chromosome:

7:127011136-127011161

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUU___UA_AUU_____CAA_________	3'
		___CUU__A___UUAUA___AGCACUUUA
		___\|.\|__\|___.\|\|\|\|___\|\|\|\|\|\|\|\|\|
		___GGA__U___GAUAU___UCGUGAAAU
(miRNA)	3'	__U___CG_____________________	5'

UTR3

7mer

807-825

0.0131351043565979

Position on chromosome:

7:127010904-127010922

Conserved species:

panTro2,rheMac2,rn4,oryCun2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CCCAAGAAAA____UA_AG____C_______	3'
		__________AUCU__A____GA_CACUUUA
		__________\|.\|\|__\|____.\|_\|\|\|\|\|\|\|
		__________UGGA__U____UU_GUGAAAU
(miRNA)	3'	_________A____CG_GAUA__C_______	5'

UTR3

6mer

106-130

0.00776692941739475

Position on chromosome:

7:127010203-127010227

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,xenTro2

Binding area:

(Transcript)	5'	GAAA_________UAU__AUCUA______	3'
		____AUUUGUACU___AG_____ACUUUA
		____\|..\|\|.\|\|\|___\|\|_____\|\|\|\|\|\|
		____UGGACGUGA___UC_____UGAAAU
(miRNA)	3'	___A_________UAU__G__________	5'

ENSG00000130962 (PRRG1)

hsa-miR-20a-5p

0.999973070225395

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

39-65

0.164793241416866

Position on chromosome:

X:37312914-37312940

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UA___AUG_AAGA___UUCU_________	3'
		__CUA___G____ACU____AGCACUUUA
		__\|\|\|___\|____\|\|\|____\|\|\|\|\|\|\|\|\|
		__GAU___C____UGA____UCGUGAAAU
(miRNA)	3'	_____GGA_G______UAU__________	5'

UTR3

6mer

2492-2520

0.00240416021940884

Position on chromosome:

X:37315367-37315395

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	_____A___UUAA_____UUAA_______	3'
		UUACU_UGU____AUAAG____UACUUUA
		.\|\|\|._\|\|.____\|\|\|\|\|____.\|\|\|\|\|\|
		GAUGG_ACG____UAUUC____GUGAAAU
(miRNA)	3'	_________UGA_________________	5'

UTR3

7mer

3308-3334

0.0154835208342897

Position on chromosome:

X:37316183-37316209

Conserved species:

panTro2,rheMac2,mm9,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	G______G_AUC___GAAUU________C	3'
		_UGUCUG_A___CUA_____GGCACUUU_
		_\|..\|\|\|_\|___\|\|\|_____.\|\|\|\|\|\|\|_
		_AUGGAC_U___GAU_____UCGUGAAA_
(miRNA)	3'	G______G_______AU___________U	5'

ENSG00000221823 (PPP3R1)

hsa-miR-20a-5p

0.999968774187507

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2076-2102

0.0124049068349237

Position on chromosome:

2:68408065-68408091

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	C_____AGAGA____CACCCAA______U	3'
		_UUAUC_____GUAC_______CACUUU_
		_.\|\|.\|_____\|.\|\|_______\|\|\|\|\|\|_
		_GAUGG_____CGUG_______GUGAAA_
(miRNA)	3'	______A________AUAUUC_______U	5'

UTR3

9mer

1906-1922

0.161819082412146

Position on chromosome:

2:68407895-68407911

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	UUCUCUCAAUAA_____G_____________	3'
		____________CU_CA_UGU_AGCACUUUA
		____________\|\|_\|\|_\|.\|_\|\|\|\|\|\|\|\|\|
		____________GA_GU_AUA_UCGUGAAAU
(miRNA)	3'	___________G__C__G___U_________	5'

UTR3

6mer

1483-1494

0.00603775347868894

Position on chromosome:

2:68407472-68407483

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUUUGUAACAAAGGAG____________________	3'
		_________________UCUGUA________ACUUUA
		_________________.\|\|\|.\|________\|\|\|\|\|\|
		_________________GGACGU________UGAAAU
(miRNA)	3'	________________U______GAUAUUCG______	5'

ENSG00000157617 (C2CD2)

hsa-miR-20a-5p

0.999968739009926

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3348-3373

0.00500765868444753

Position on chromosome:

21:43308569-43308594

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	AU___AU____AG____C__AA______U	3'
		__CCU__GCAU__UAUG_AG__CACUUU_
		__\|\|\|__\|\|\|.__\|\|\|._\|\|__\|\|\|\|\|\|_
		__GGA__CGUG__AUAU_UC__GUGAAA_
(miRNA)	3'	_U__________________________U	5'

UTR3

6mer

2708-2733

0.00235033083123203

Position on chromosome:

21:43307929-43307954

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	UU____ACAGUUUAA_____UU______U	3'
		__CUUG_________UAUGA__CACUUU_
		__\|.\|\|_________\|\|\|.\|__\|\|\|\|\|\|_
		__GGAC_________AUAUU__GUGAAA_
(miRNA)	3'	_U____GUG___________C_______U	5'

UTR3

7mer

2290-2308

0.00533744056516354

Position on chromosome:

21:43307511-43307529

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAGAAAACGA_____GGAAUUU_______	3'
		__________CAUUA_______CACUUUA
		__________\|\|.\|\|_______\|\|\|\|\|\|\|
		__________GUGAU_______GUGAAAU
(miRNA)	3'	_________C_____AUUC__________	5'

UTR3

6mer

2238-2260

0.00075620513822652

Position on chromosome:

21:43307459-43307481

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	GGUGUU__A_GA_____C____G______	3'
		______CC_G__AUUAU_AAGU_ACUUUA
		______\|\|_\|__\|.\|\|\|_\|\|\|._\|\|\|\|\|\|
		______GG_C__UGAUA_UUCG_UGAAAU
(miRNA)	3'	_____U__A_G__________________	5'

UTR3

7mer

2071-2095

0.00489843950925602

Position on chromosome:

21:43307292-43307316

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	UGGG__AGA__G_ACAG___UU_______	3'
		____AC___UG_G____AUG__CACUUUA
		____\|\|___\|\|_.____\|\|.__\|\|\|\|\|\|\|
		____UG___AC_U____UAU__GUGAAAU
(miRNA)	3'	___A__G____G_GA_____UC_______	5'

UTR3

9mer

813-839

0.0769302922259617

Position on chromosome:

21:43306034-43306060

Conserved species:

panTro2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UG____GA_AGUU___ACA__________	3'
		__CUGU__G____UUG___GAGCACUUUA
		__\|\|..__\|____.\|.___.\|\|\|\|\|\|\|\|\|
		__GAUG__C____GAU___UUCGUGAAAU
(miRNA)	3'	______GA_GU_____A____________	5'

UTR3

9mer

118-140

0.0849629732092741

Position on chromosome:

21:43305339-43305361

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CAAUGA_______CCUCAGU_________	3'
		______UUGUAUU_______AGCACUUUA
		______.\|\|.\|.\|_______\|\|\|\|\|\|\|\|\|
		______GACGUGA_______UCGUGAAAU
(miRNA)	3'	_____G_______UAU_____________	5'

ENSG00000146373 (RNF217)

hsa-miR-20a-5p

0.999965251784892

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

137-155

0.104395571466786

Position on chromosome:

6:125366513-125366531

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CAAGCCAUGU______G__C__________	3'
		__________CCU_CA_UG_AAGCACUUUA
		__________\|\|\|_\|\|_\|._\|\|\|\|\|\|\|\|\|\|
		__________GGA_GU_AU_UUCGUGAAAU
(miRNA)	3'	_________U___C__G__A__________	5'

UTR3

6mer

930-953

0.00405912551756097

Position on chromosome:

6:125404286-125404309

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GCUG______U__AAAA____U______C	3'
		____CUGCUU_UA____AUGG_CACUUU_
		____\|\|.\|.\|_.\|____\|\|.._\|\|\|\|\|\|_
		____GAUGGA_GU____UAUU_GUGAAA_
(miRNA)	3'	__________C__GA______C______U	5'

UTR3

6mer

3345-3359

0.00256705726489453

Position on chromosome:

6:125406701-125406715

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUUUGGGAGAAAUU___AAA_________________	3'
		______________CUA_____ACU______ACUUUA
		______________\|\|\|_____\|\|\|______\|\|\|\|\|\|
		______________GAU_____UGA______UGAAAU
(miRNA)	3'	_________________GGACG___UAUUCG______	5'

UTR3

6mer

3424-3449

0.00133810792565049

Position on chromosome:

6:125406780-125406805

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUA_____AAUUUAA____UAC_______	3'
		___UUGUA_______UAUA___UACUUUA
		___.\|\|.\|_______\|\|\|\|___.\|\|\|\|\|\|
		___GACGU_______AUAU___GUGAAAU
(miRNA)	3'	__G_____G__________UC________	5'

UTR3

6mer

3541-3562

0.00110113489772883

Position on chromosome:

6:125406897-125406918

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUUGG___G___C__UCC__A______C	3'
		______UAU_UGU_CU___AG_CACUUU_
		______\|\|._\|\|._\|\|___\|\|_\|\|\|\|\|\|_
		______AUG_ACG_GA___UC_GUGAAA_
(miRNA)	3'	_____G___G___U__UAU_________U	5'

UTR3

6mer

3739-3761

0.00163525655435703

Position on chromosome:

6:125407095-125407117

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGCAUA______________AGUA_______	3'
		______AUC__CAUUGUAGG____UACUUUA
		______\|.\|__\|\|.\|.\|\|.\|____.\|\|\|\|\|\|
		______UGG__GUGAUAUUC____GUGAAAU
(miRNA)	3'	_____A___AC____________________	5'

UTR3

6mer

4250-4262

0.00140819699939596

Position on chromosome:

6:125407606-125407618

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCGCAUUUUUAGUAA______C________U	3'
		_______________CACUAU___CACUUU_
		_______________\|\|\|\|\|\|___\|\|\|\|\|\|_
		_______________GUGAUA___GUGAAA_
(miRNA)	3'	______________C______UUC______U	5'

UTR3

6mer

4985-4995

0.00176684624737965

Position on chromosome:

6:125408341-125408351

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUGAAAUUGUUUUUAA_______________U	3'
		_________________CAUUA____CACUUU_
		_________________\|\|.\|\|____\|\|\|\|\|\|_
		_________________GUGAU____GUGAAA_
(miRNA)	3'	________________C_____AUUC______U	5'

UTR3

6mer

5044-5063

0.000563935974605896

Position on chromosome:

6:125408400-125408419

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCCUCUAUA____UA____GCA________	3'
		_________ACCU__AUUG____UACUUUA
		_________\|\|\|\|__\|.\|.____.\|\|\|\|\|\|
		_________UGGA__UGAU____GUGAAAU
(miRNA)	3'	________A____CG____AUUC_______	5'

UTR3

8mer

5269-5294

0.050976254097933

Position on chromosome:

6:125408625-125408650

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUA____UA_AAUU______U________	3'
		___GCCU__A____UUGUAA_GCACUUUA
		___.\|\|\|__\|____.\|.\|\|\|_\|\|\|\|\|\|\|\|
		___UGGA__U____GAUAUU_CGUGAAAU
(miRNA)	3'	__A____CG____________________	5'

UTR3

6mer

6904-6918

0.00095584613474342

Position on chromosome:

6:125410260-125410274

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAUGUAUCAGGAG______G_A____________U	3'
		_____________UGCCUG_A_______CACUUU_
		_____________\|.\|\|\|\|_\|_______\|\|\|\|\|\|_
		_____________AUGGAC_U_______GUGAAA_
(miRNA)	3'	____________G______G_GAUAUUC______U	5'

UTR3

6mer

8840-8858

0.00189154052050561

Position on chromosome:

6:125412196-125412214

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUCUUAAAA____A____UCUUA______U	3'
		_________ACCU__AUU_____CACUUU_
		_________\|\|\|\|__\|.\|_____\|\|\|\|\|\|_
		_________UGGA__UGA_____GUGAAA_
(miRNA)	3'	________A____CG___UAUUC______U	5'

UTR3

6mer

9114-9139

0.00313217044111144

Position on chromosome:

6:125412470-125412495

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAG_____UAUUUUUUU____U___________	3'
		___UGCCU_________CACU____G_ACUUUA
		___\|.\|\|\|_________\|\|\|\|____\|_\|\|\|\|\|\|
		___AUGGA_________GUGA____C_UGAAAU
(miRNA)	3'	__G_____C____________UAUU_G______	5'

UTR3

6mer

9448-9475

0.00272374857625316

Position on chromosome:

6:125412804-125412831

Conserved species:

panTro2,canFam2

Binding area:

(Transcript)	5'	A__G__C__AU_____ACAAAAU_______	3'
		_UA_CU_CA___UAGG_______UACUUUA
		_\|\|_\|\|_\|\|___\|\|.\|_______.\|\|\|\|\|\|
		_AU_GA_GU___AUUC_______GUGAAAU
(miRNA)	3'	G__G__C__GAU__________________	5'

ENSG00000165970 (SLC6A5)

hsa-miR-20a-5p

0.999964870421994

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1265-1293

0.00217094116991243

Position on chromosome:

11:20677680-20677708

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	____AGAAAUUG___AA___UAA______	3'
		CUGC________GCA__GUG___ACUUUA
		\|\|.\|________\|\|\|__.\|.___\|\|\|\|\|\|
		GAUG________CGU__UAU___UGAAAU
(miRNA)	3'	____GA_________GA___UCG______	5'

UTR3

6mer

1793-1814

0.00176896442479355

Position on chromosome:

11:20678208-20678229

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	AAGGAAA__AAG______UUUGA______	3'
		_______CA___AUGGGU_____ACUUUA
		_______\|\|___\|\|..\|._____\|\|\|\|\|\|
		_______GU___UAUUCG_____UGAAAU
(miRNA)	3'	______C__GA__________________	5'

UTR3

9mer

3170-3196

0.0389251591134967

Position on chromosome:

11:20679585-20679611

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CA_________UCA___AGC_________	3'
		__ACUUGUAUU___GUA___AGCACUUUA
		__\|\|.\|\|.\|.\|___.\|\|___\|\|\|\|\|\|\|\|\|
		__UGGACGUGA___UAU___UCGUGAAAU
(miRNA)	3'	_A___________________________	5'

UTR3

8mer

3984-4006

0.135471323427871

Position on chromosome:

11:20680399-20680421

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UCUCAU________GG_U_UU________	3'
		______UUGUUUGU__U_U__GCACUUUA
		______.\|...\|\|.__\|_\|__\|\|\|\|\|\|\|\|
		______GAUGGACG__A_A__CGUGAAAU
(miRNA)	3'	______________UG_U_UU________	5'