DIANA TOOLS - MicroT-CDS

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Results: 59 targets for miRNAs hsa-miR-208b-3p

. Threshold is set to 0.7.

Name:	hsa-miR-208b-3p
Alternative description:	MIMAT0004960
Related names:
miRNA sequence:	auaagacgaacaaaagguuugu
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Cardiomegaly Fibrosis Genetic Predisposition to Disease Glioblastoma Glioma Heart Diseases Heart Injuries Hematologic Neoplasms Hypothyroidism Lupus Nephritis Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000143033 (MTF2)

hsa-miR-208b-3p

0.970133309090512

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

547-566

0.063348815871545

Position on chromosome:

1:93603132-93603151

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCUGUGAC_______CA____________A	3'
		________UAGACUU__UUG_UCGUCUUA_
		________.\|.\|\|.\|__\|\|\|_\|\|\|\|\|\|\|\|_
		________GUUUGGA__AAC_AGCAGAAU_
(miRNA)	3'	_______U_______A____A________A	5'

UTR3

6mer

1283-1299

0.0042451790195411

Position on chromosome:

1:93603868-93603884

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GCCAAAGAGUGA_____AGA________________	3'
		____________ACAGA___UUU_______UCUUAU
		____________\|\|\|.\|___.\|\|_______\|\|\|\|\|\|
		____________UGUUU___GAA_______AGAAUA
(miRNA)	3'	_________________G_____AACAAGC______	5'

ENSG00000081019 (RSBN1)

hsa-miR-208b-3p

0.897928181662117

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3959-3982

0.0116926521939361

Position on chromosome:

1:114308413-114308436

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUUAU_____G__AAGAG____A________	3'
		_____GCAAA_UU_____UUGU___UCUUAU
		_____.\|\|\|\|_.\|_____\|\|\|\|___\|\|\|\|\|\|
		_____UGUUU_GA_____AACA___AGAAUA
(miRNA)	3'	__________G__A________AGC______	5'

UTR3

6mer

3247-3271

0.00274758579467219

Position on chromosome:

1:114307701-114307725

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGCU___AUA_____AG_AUCAA______	3'
		____GCC___UUUUG__C_____UCUUAU
		____.\|\|___\|\|\|\|\|__\|_____\|\|\|\|\|\|
		____UGG___AAAAC__G_____AGAAUA
(miRNA)	3'	___U___________AA_C__________	5'

UTR3

6mer

2880-2902

0.0025248854702681

Position on chromosome:

1:114307334-114307356

Conserved species:

panTro2,danRer6

Binding area:

(Transcript)	5'	ACUCCC__C____AAGACCAGAU______	3'
		______CA_ACCU__________UCUUAU
		______\|\|_\|\|\|\|__________\|\|\|\|\|\|
		______GU_UGGA__________AGAAUA
(miRNA)	3'	_____U__U____AAACAAGC________	5'

UTR3

6mer

2676-2701

0.00525216003760067

Position on chromosome:

1:114307130-114307155

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAA___U____GAAAUAG___AAA______	3'
		___AUA__UCU_______GUU___UCUUAU
		___\|.\|__.\|\|_______\|\|\|___\|\|\|\|\|\|
		___UGU__GGA_______CAA___AGAAUA
(miRNA)	3'	______UU___AAA_______GC_______	5'

UTR3

6mer

962-977

0.0056896825839005

Position on chromosome:

1:114305416-114305431

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAGGAAAAGAUG____GCA___A______C	3'
		____________UCUU____UC_GUCUUA_
		____________.\|\|\|____\|\|_\|\|\|\|\|\|_
		____________GGAA____AG_CAGAAU_
(miRNA)	3'	___________U____AACA_________A	5'

UTR3

6mer

166-188

0.0183373155368887

Position on chromosome:

1:114304620-114304642

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUAAA___G____UAA__AAUA______A	3'
		_____AAG_UUUU___UG____GUCUUA_
		_____\|\|._.\|\|\|___\|\|____\|\|\|\|\|\|_
		_____UUU_GAAA___AC____CAGAAU_
(miRNA)	3'	____G___G_________AAG_______A	5'

ENSG00000187772 (LIN28B)

hsa-miR-208b-3p

0.893253835085744

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1248-1266

0.00212086759501378

Position on chromosome:

6:105527907-105527925

Conserved species:

panTro2,bosTau4

Binding area:

(Transcript)	5'	AGUAUUUUAU____UAA____GA__________	3'
		__________ACAG___CUUU______UCUUAU
		__________\|\|\|.___\|\|\|\|______\|\|\|\|\|\|
		__________UGUU___GAAA______AGAAUA
(miRNA)	3'	______________UG_____ACAAGC______	5'

UTR3

6mer

2257-2270

0.00285530863110153

Position on chromosome:

6:105528916-105528929

Conserved species:

panTro2,rheMac2,mm9,canFam2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	ACUAAGAGCACAUAC_______A_____________	3'
		_______________CAAACCU________UCUUAU
		_______________\|\|\|\|\|\|\|________\|\|\|\|\|\|
		_______________GUUUGGA________AGAAUA
(miRNA)	3'	______________U_______AAACAAGC______	5'

UTR3

6mer

2897-2918

0.00182230840581197

Position on chromosome:

6:105529556-105529577

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	AGCAAA_____ACA_GGAAGCA_______G	3'
		______ACAGA___C________GUCUUA_
		______\|\|\|.\|___\|________\|\|\|\|\|\|_
		______UGUUU___G________CAGAAU_
(miRNA)	3'	___________G___AAAACAAG______A	5'

UTR3

6mer

3650-3669

0.00705212042656012

Position on chromosome:

6:105530309-105530328

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AGGACAUG_G______CAUUAA_______A	3'
		________G_AAAUCU_______GUCUUA_
		________._\|\|\|.\|\|_______\|\|\|\|\|\|_
		________U_UUUGGA_______CAGAAU_
(miRNA)	3'	_________G______AAACAAG______A	5'

UTR3

6mer

3784-3810

0.00621510752880479

Position on chromosome:

6:105530443-105530469

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	C__UG_____AAUUUUCUAGA_______A	3'
		_AC__ACUUU___________UGUCUUA_
		_\|\|__\|\|.\|\|___________.\|\|\|\|\|\|_
		_UG__UGGAA___________GCAGAAU_
(miRNA)	3'	___UU_____AACAA_____________A	5'

UTR3

6mer

3855-3868

0.00345584070997

Position on chromosome:

6:105530514-105530527

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	CUUGUUAAAAGCAU______C_____________C	3'
		______________CAAACU_______UGUCUUA_
		______________\|\|\|\|\|._______.\|\|\|\|\|\|_
		______________GUUUGG_______GCAGAAU_
(miRNA)	3'	_____________U______AAAACAA_______A	5'

UTR3

6mer

3909-3921

0.00257281404290553

Position on chromosome:

6:105530568-105530580

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUGUGGUGGUUGUAU_____G____________A	3'
		_______________GAUCU______UGUCUUA_
		_______________.\|.\|\|______.\|\|\|\|\|\|_
		_______________UUGGA______GCAGAAU_
(miRNA)	3'	______________U_____AAACAA_______A	5'

UTR3

7mer

4458-4474

0.0193327763110515

Position on chromosome:

6:105531117-105531133

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AUAUUCUCAUUU__UG___AA____________	3'
		____________CA__CCU______UGUCUUAU
		____________\|\|__\|\|\|______.\|\|\|\|\|\|\|
		____________GU__GGA______GCAGAAUA
(miRNA)	3'	___________U__UU___AAACAA________	5'

ENSG00000206052 (DOK6)

hsa-miR-208b-3p

0.88796424154137

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

774-785

0.00571406100859447

Position on chromosome:

18:67509394-67509405

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	UAAAAAAAAAAAAAAAA___G________________	3'
		_________________AAG_CU________UCUUAU
		_________________\|\|._\|\|________\|\|\|\|\|\|
		_________________UUU_GA________AGAAUA
(miRNA)	3'	________________G___G__AAACAAGC______	5'

UTR3

6mer

4376-4397

0.00347950128600433

Position on chromosome:

18:67512996-67513017

Conserved species:

panTro2,rheMac2,rn4,mm9,dasNov2,echTel1

Binding area:

(Transcript)	5'	CAGAGG________G___C__UA_______A	3'
		______ACA__UCU_UUG_UU__UGUCUUA_
		______\|\|\|__.\|\|_\|\|\|_\|\|__.\|\|\|\|\|\|_
		______UGU__GGA_AAC_AA__GCAGAAU_
(miRNA)	3'	_________UU___A_______________A	5'

UTR3

6mer

4759-4780

0.00137394296175982

Position on chromosome:

18:67513379-67513400

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GAGGCAC_____AGUUUAUAGAC______	3'
		_______UAGAC___________UCUUAU
		_______.\|.\|\|___________\|\|\|\|\|\|
		_______GUUUG___________AGAAUA
(miRNA)	3'	______U_____GAAAACAAGC_______	5'

UTR3

6mer

5216-5239

0.00151794560813621

Position on chromosome:

18:67513836-67513859

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCAUC___U_____GAAA___AA______	3'
		_____CAG_UCUUU____UUC__UCUUAU
		_____\|\|._.\|\|\|\|____\|\|\|__\|\|\|\|\|\|
		_____GUU_GGAAA____AAG__AGAAUA
(miRNA)	3'	____U___U_____AC_____C_______	5'

UTR3

7mer

6849-6869

0.00906812323977912

Position on chromosome:

18:67515469-67515489

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	UAAUUUAU___U_________GAA_______	3'
		________AUA_ACUU__UGU___GUCUUAU
		________\|.\|_\|\|.\|__\|\|\|___\|\|\|\|\|\|\|
		________UGU_UGGA__ACA___CAGAAUA
(miRNA)	3'	___________U____AA___AG________	5'

UTR3

7mer

7321-7347

0.0179107620814088

Position on chromosome:

18:67515941-67515967

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AA________A_____AACAA________	3'
		__AUAAACCU_UUGUU_____UGUCUUAU
		__\|.\|\|\|\|\|\|_\|\|\|\|\|_____.\|\|\|\|\|\|\|
		__UGUUUGGA_AACAA_____GCAGAAUA
(miRNA)	3'	__________A__________________	5'

UTR3

6mer

7538-7552

0.00547527078409944

Position on chromosome:

18:67516158-67516172

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AACACUGUAAUAUU____G_____________	3'
		______________ACUU___GUUU_UCUUAU
		______________\|\|.\|___\|\|\|._\|\|\|\|\|\|
		______________UGGA___CAAG_AGAAUA
(miRNA)	3'	_____________U____AAA____C______	5'

ENSG00000197372 (ZNF675)

hsa-miR-208b-3p

0.864431931996487

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

680-707

0.020734899940246

Position on chromosome:

19:23709113-23709140

Conserved species:

panTro2

Binding area:

(Transcript)	5'	U_______A___CACAUUGCAAC______	3'
		_GCUUUUU_UUC___________UCUUAU
		_.\|.\|\|\|\|_\|\|\|___________\|\|\|\|\|\|
		_UGGAAAA_AAG___________AGAAUA
(miRNA)	3'	U_______C___C________________	5'

UTR3

7mer

401-416

0.0202496580360278

Position on chromosome:

19:23708834-23708849

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUAUUGAUUAUA__CA____________	3'
		_____________CU__UGUUUGUCUUAU
		_____________\|\|__\|\|\|\|.\|\|\|\|\|\|\|
		_____________GA__ACAAGCAGAAUA
(miRNA)	3'	____________G__AA____________	5'

ENSG00000143995 (MEIS1)

hsa-miR-208b-3p

0.858909683400179

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

415-432

0.00787521373404236

Position on chromosome:

2:66796327-66796344

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGAAUAUUUUU___C___CAUUU______	3'
		___________CCU_UUG_____UCUUAU
		___________\|\|\|_\|\|\|_____\|\|\|\|\|\|
		___________GGA_AAC_____AGAAUA
(miRNA)	3'	__________U___A___AAGC_______	5'

UTR3

7mer

1440-1457

0.00603734828422013

Position on chromosome:

2:66797352-66797369

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,echTel1,monDom5

Binding area:

(Transcript)	5'	CAUUGAGCUGG_G__UG_AACA___________	3'
		___________G_AA__C________GUCUUAU
		___________._\|\|__\|________\|\|\|\|\|\|\|
		___________U_UU__G________CAGAAUA
(miRNA)	3'	____________G__UG_AAAACAAG_______	5'

UTR3

6mer

1914-1932

0.00496216083009973

Position on chromosome:

2:66797826-66797844

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GGUAUUGUUU__GG__CAA_____U______	3'
		__________UA__UC_____UUU_UCUUAU
		__________.\|__.\|_____\|\|._\|\|\|\|\|\|
		__________GU__GG_____AAG_AGAAUA
(miRNA)	3'	_________U__UU__AAAAC___C______	5'

UTR3

6mer

2997-3010

0.0100517849378771

Position on chromosome:

2:66798909-66798922

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACUGUUAUCCAUAUU__G_______________	3'
		_______________AC___UUGUU__UCUUAU
		_______________\|\|___\|\|\|\|\|__\|\|\|\|\|\|
		_______________UG___AACAA__AGAAUA
(miRNA)	3'	______________U__GAA_____GC______	5'

UTR3

6mer

3385-3399

0.0113007506913302

Position on chromosome:

2:66799297-66799311

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUAAUCAGCUGUU___GG_AG_____________A	3'
		_____________GCA__C________UGUCUUA_
		_____________.\|\|__\|________.\|\|\|\|\|\|_
		_____________UGU__G________GCAGAAU_
(miRNA)	3'	________________UU_GAAAACAA_______A	5'

ENSG00000188001 (TPRG1)

hsa-miR-208b-3p

0.854941270377423

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

345-370

0.00443925830723873

Position on chromosome:

3:189038955-189038980

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUU__GG____GGUC___A_CCC______	3'
		___UA__UCUU____UUC_G___UCUUAU
		___.\|__.\|\|\|____\|\|\|_\|___\|\|\|\|\|\|
		___GU__GGAA____AAG_C___AGAAUA
(miRNA)	3'	__U__UU____AAC_______________	5'

UTR3

6mer

736-750

0.00265407503076875

Position on chromosome:

3:189039346-189039360

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUUCAUGUAUUCCU_____CCAU________	3'
		______________CCUUU______UCUUAU
		______________\|\|\|\|\|______\|\|\|\|\|\|
		______________GGAAA______AGAAUA
(miRNA)	3'	_____________U_____ACAAGC______	5'

UTR3

6mer

1081-1108

0.0023717700092503

Position on chromosome:

3:189039691-189039718

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	______A______UUCAAAAACAC_______A	3'
		_AGACC___UGUU___________UGUCUUA_
		_\|.\|\|\|___\|\|\|\|___________.\|\|\|\|\|\|_
		_UUUGG___ACAA___________GCAGAAU_
(miRNA)	3'	G_____AAA______________________A	5'

UTR3

6mer

1113-1141

0.00180025294563481

Position on chromosome:

3:189039723-189039751

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	____A____CA___CUCUUUUCCC______	3'
		_UCU_UUGU__UUG__________UCUUAU
		_.\|\|_\|\|\|\|__\|.\|__________\|\|\|\|\|\|
		_GGA_AACA__AGC__________AGAAUA
(miRNA)	3'	U___A_________________________	5'

UTR3

7mer

1234-1249

0.00317189854599255

Position on chromosome:

3:189039844-189039859

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUCUUUUCUUUUU_____CAGA________	3'
		_____________UCUUU_____GUCUUAU
		_____________.\|\|\|\|_____\|\|\|\|\|\|\|
		_____________GGAAA_____CAGAAUA
(miRNA)	3'	____________U_____ACAAG_______	5'

UTR3

6mer

1504-1524

0.00206693751530102

Position on chromosome:

3:189040114-189040134

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCAAACCC________GAAUAAC______	3'
		________UAAACCUU_______UCUUAU
		________.\|\|\|\|\|\|\|_______\|\|\|\|\|\|
		________GUUUGGAA_______AGAAUA
(miRNA)	3'	_______U________AACAAGC______	5'

UTR3

6mer

2251-2261

0.00243198346094043

Position on chromosome:

3:189040861-189040871

Conserved species:

panTro2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GCAGUUCAAGAUAAGAAA____________________	3'
		__________________GAACU_________UCUUAU
		__________________.\|\|\|._________\|\|\|\|\|\|
		__________________UUUGG_________AGAAUA
(miRNA)	3'	_________________G_____AAAACAAGC______	5'

UTR3

6mer

4085-4111

0.0116112963611209

Position on chromosome:

3:189042695-189042721

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AG____G__GCUCA__AG__ACU______	3'
		__GGAC_CU_____UG__UG___UCUUAU
		__..\|\|_\|\|_____\|\|__.\|___\|\|\|\|\|\|
		__UUUG_GA_____AC__GC___AGAAUA
(miRNA)	3'	_G_______AA_____AA___________	5'

UTR3

7mer

4279-4298

0.00915074144086682

Position on chromosome:

3:189042889-189042908

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UACUGAGAG_GG___AAUAC__________	3'
		_________U__ACC______UUGUCUUAU
		_________.__\|\|\|______\|.\|\|\|\|\|\|\|
		_________G__UGG______AGCAGAAUA
(miRNA)	3'	________U_UU___AAAACA_________	5'

ENSG00000120963 (ZNF706)

hsa-miR-208b-3p

0.847154104557276

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1780-1796

0.00804265828288614

Position on chromosome:

8:102211060-102211076

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCAGCUAGAAUU____________CAAU______	3'
		____________GCAAG_____UG____UCUUAU
		____________.\|\|\|._____\|\|____\|\|\|\|\|\|
		____________UGUUU_____AC____AGAAUA
(miRNA)	3'	_________________GGAAA__AAGC______	5'

UTR3

6mer

725-741

0.00415843236596236

Position on chromosome:

8:102210005-102210021

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GAUAGUUUCUUA____UU___AU____________	3'
		____________GCAA__CCU________UCUUAU
		____________.\|\|\|__\|\|\|________\|\|\|\|\|\|
		____________UGUU__GGA________AGAAUA
(miRNA)	3'	________________U____AAACAAGC______	5'

UTR3

7mer

21-37

0.0264929235633791

Position on chromosome:

8:102209301-102209317

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GGGCUCAGUUGU_UG__GUAA__________	3'
		____________G__CU______UGUCUUAU
		____________.__\|\|______.\|\|\|\|\|\|\|
		____________U__GA______GCAGAAUA
(miRNA)	3'	___________U_UG__AAACAA________	5'

ENSG00000048740 (CELF2)

hsa-miR-208b-3p

0.839544408741347

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1679-1693

0.00282452926745864

Position on chromosome:

10:11372696-11372710

Conserved species:

panTro2,rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	AACCUGUGGCAAAA___UU_________________	3'
		______________ACG__UCUU_______UCUUAU
		______________\|\|.__.\|\|\|_______\|\|\|\|\|\|
		______________UGU__GGAA_______AGAAUA
(miRNA)	3'	_________________UU____AACAAGC______	5'

UTR3

6mer

2174-2182

0.00774445244464182

Position on chromosome:

10:11373191-11373199

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUAAGUUGUGGUUUCAUCA__A________A	3'
		___________________UG___GUCUUA_
		___________________\|\|___\|\|\|\|\|\|_
		___________________AC___CAGAAU_
(miRNA)	3'	__________________A__AAG______A	5'

UTR3

6mer

3708-3726

0.00262214296076795

Position on chromosome:

10:11374761-11374779

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAAGCAAC______G___C____U______	3'
		__________ACAAAC_UUU____C_UCUUAU
		__________\|\|\|\|\|\|_\|\|\|____\|_\|\|\|\|\|\|
		__________UGUUUG_AAA____G_AGAAUA
(miRNA)	3'	________________G___ACAA_C______	5'

UTR3

6mer

3944-3970

0.00182330585481584

Position on chromosome:

10:11374997-11375023

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UA_____A___CA___U_AAACU______	3'
		__AGACC_UUU__UUC_G_____UCUUAU
		__\|.\|\|\|_\|\|\|__\|\|\|_\|_____\|\|\|\|\|\|
		__UUUGG_AAA__AAG_C_____AGAAUA
(miRNA)	3'	_G_________AC________________	5'

UTR3

7mer

6245-6268

0.00238169864174721

Position on chromosome:

10:11377298-11377321

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCCGU___UG___GCUCCCUC________	3'
		_____CGA__UUU________UGUCUUAU
		_____\|.\|__.\|\|________.\|\|\|\|\|\|\|
		_____GUU__GAA________GCAGAAUA
(miRNA)	3'	____U___UG___AACAA___________	5'

UTR3

7mer

7391-7411

0.0203563057497467

Position on chromosome:

10:11378444-11378464

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCAGGAAC____UA__GGAUG_________	3'
		________ACAA__CU______UGUCUUAU
		________\|\|\|\|__\|\|______.\|\|\|\|\|\|\|
		________UGUU__GA______GCAGAAUA
(miRNA)	3'	____________UG__AAACAA________	5'

ENSG00000127483 (HP1BP3)

hsa-miR-208b-3p

0.829306321464547

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2091-2096

0.0166214367930714

Position on chromosome:

1:21071245-21071250

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GGGUAUCAUGAUGAAAUUCAAAA______	3'
		_______________________UCUUAU
		_______________________\|\|\|\|\|\|
		_______________________AGAAUA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1649-1654

0.010639141500082

Position on chromosome:

1:21070803-21070808

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCAGUUAUAGCUGUAAUAAUUAA______	3'
		_______________________UCUUAU
		_______________________\|\|\|\|\|\|
		_______________________AGAAUA
(miRNA)	3'	______________________C______	5'

UTR3

6mer

415-436

0.0046972503957076

Position on chromosome:

1:21069569-21069590

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UGAAGCC___CU____AACCCUU_______	3'
		_______CAA__ACCU________UCUUAU
		_______\|\|\|__\|\|\|\|________\|\|\|\|\|\|
		_______GUU__UGGA________AGAAUA
(miRNA)	3'	______U_________AAACAAGC______	5'

UTR3

6mer

240-261

0.00458314097746946

Position on chromosome:

1:21069394-21069415

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GCCAGAG_____AGA________UU______	3'
		_______GCAAA_____UGUUUG__UCUUAU
		_______.\|\|\|\|_____\|\|\|\|.\|__\|\|\|\|\|\|
		_______UGUUU_____ACAAGC__AGAAUA
(miRNA)	3'	____________GGAAA______________	5'

ENSG00000269282 (AC024257.1)

hsa-miR-208b-3p

0.825528585194082

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

29-41

0.0209775723830972

Position on chromosome:

12:48760422-48760434

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAUUUAUGGUUUUGUU__________________	3'
		________________ACCUUUU_____UCUUAU
		________________\|\|\|\|\|\|\|_____\|\|\|\|\|\|
		________________UGGAAAA_____AGAAUA
(miRNA)	3'	_______________U_______CAAGC______	5'

UTR3

6mer

1013-1025

0.015131001363271

Position on chromosome:

12:48761406-48761418

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAAAAGAAAUUCAUG_____AA______________G	3'
		_______________ACAAA__________GUCUUA_
		_______________\|\|\|\|\|__________\|\|\|\|\|\|_
		_______________UGUUU__________CAGAAU_
(miRNA)	3'	____________________GGAAAACAAG______A	5'

ENSG00000143324 (XPR1)

hsa-miR-208b-3p

0.820130729341991

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

255-273

0.00527164850141484

Position on chromosome:

1:180853458-180853476

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	GUUUUAAGAA_____ACAUA___A________	3'
		__________ACAAA______GU___UCUUAU
		__________\|\|\|\|\|______\|\|___\|\|\|\|\|\|
		__________UGUUU______CA___AGAAUA
(miRNA)	3'	_______________GGAAAA__AGC______	5'

UTR3

6mer

533-561

0.0109822107688138

Position on chromosome:

1:180853736-180853764

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	________AA____AUGUAACUUU______	3'
		_ACUUUUU__UUUG__________UCUUAU
		_\|\|.\|\|\|\|__\|\|.\|__________\|\|\|\|\|\|
		_UGGAAAA__AAGC__________AGAAUA
(miRNA)	3'	U_______C_____________________	5'

UTR3

6mer

2230-2248

0.0020464318165691

Position on chromosome:

1:180855433-180855451

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	AAAAGUCCAG_GG___AGGCAUU________	3'
		__________U__ACC_________UCUUAU
		__________.__\|\|\|_________\|\|\|\|\|\|
		__________G__UGG_________AGAAUA
(miRNA)	3'	_________U_UU___AAAACAAGC______	5'

UTR3

7mer

2437-2456

0.0034054823948682

Position on chromosome:

1:180855640-180855659

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUACAGUUC__GG__CUAA____G_______	3'
		_________UA__CC______UC_GUCUUAU
		_________.\|__\|\|______\|\|_\|\|\|\|\|\|\|
		_________GU__GG______AG_CAGAAUA
(miRNA)	3'	________U__UU__AAAACA__________	5'

UTR3

6mer

4156-4179

0.00295382981540279

Position on chromosome:

1:180857359-180857382

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	UCUAA____UG___ACAAAAAUU______	3'
		_____GCAG__ACC_________UCUUAU
		_____.\|\|.__\|\|\|_________\|\|\|\|\|\|
		_____UGUU__UGG_________AGAAUA
(miRNA)	3'	______________AAAACAAGC______	5'

UTR3

6mer

5981-6002

0.0108437616063731

Position on chromosome:

1:180859184-180859205

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUCCUU___AUA__GGUA_AAU______	3'
		_______CCU___UG____G___UCUUAU
		_______\|\|\|___\|\|____\|___\|\|\|\|\|\|
		_______GGA___AC____C___AGAAUA
(miRNA)	3'	______U___AA___AAG___________	5'

ENSG00000062194 (GPBP1)

hsa-miR-208b-3p

0.81942649780681

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

328-344

0.0164202363769266

Position on chromosome:

5:56558908-56558924

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUAAUGUUUU_____G___C___________A	3'
		___________GCAAA_CUU_____UGUCUUA_
		___________.\|\|\|\|_\|\|\|_____.\|\|\|\|\|\|_
		___________UGUUU_GAA_____GCAGAAU_
(miRNA)	3'	________________G___AACAA_______A	5'

UTR3

6mer

340-360

0.0125544086053866

Position on chromosome:

5:56558920-56558940

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GCUUCUG____AAAA___CCAG______A	3'
		_______UCUU____UGU____GUCUUA_
		_______.\|\|\|____\|\|\|____\|\|\|\|\|\|_
		_______GGAA____ACA____CAGAAU_
(miRNA)	3'	______U____A______AG________A	5'

UTR3

6mer

1779-1799

0.00645081407674727

Position on chromosome:

5:56560359-56560379

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUAGUUUU_G______GCA__UU______	3'
		________G_UUUUUG___UC__UCUUAU
		________._.\|\|\|\|\|___\|\|__\|\|\|\|\|\|
		________U_GAAAAC___AG__AGAAUA
(miRNA)	3'	_______U_G______A____C_______	5'

ENSG00000177570 (SAMD12)

hsa-miR-208b-3p

0.801560953269884

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

7031-7057

0.00321558824956191

Position on chromosome:

8:119208729-119208755

Conserved species:

panTro2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	U________U__UUUUAACUA_______C	3'
		_AAUUUUUU_UU_________UGUCUUA_
		_\|\|..\|\|\|\|_\|\|_________.\|\|\|\|\|\|_
		_UUGGAAAA_AA_________GCAGAAU_
(miRNA)	3'	U________C__________________A	5'

UTR3

8mer

4434-4453

0.00918148839832847

Position on chromosome:

8:119206132-119206151

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUGACAAC_______GUCAA________G	3'
		________UAGACUU_____UCGUCUUA_
		________.\|.\|\|.\|_____\|\|\|\|\|\|\|\|_
		________GUUUGGA_____AGCAGAAU_
(miRNA)	3'	_______U_______AAACA________A	5'

UTR3

6mer

2481-2502

0.00125864399580552

Position on chromosome:

8:119204179-119204200

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCUUUCU_____CUAUAGAGACU______	3'
		_______AACCU___________UCUUAU
		_______\|\|\|\|\|___________\|\|\|\|\|\|
		_______UUGGA___________AGAAUA
(miRNA)	3'	______U_____AAACAAGC_________	5'

UTR3

6mer

591-606

0.00539920020761245

Position on chromosome:

8:119202289-119202304

Conserved species:

panTro2,rn4,mm9

Binding area:

(Transcript)	5'	UAAGUGAGUAGU______AGCA__________A	3'
		____________UAAACC________GUCUUA_
		____________.\|\|\|\|\|________\|\|\|\|\|\|_
		____________GUUUGG________CAGAAU_
(miRNA)	3'	___________U______AAAACAAG______A	5'

UTR3

6mer

235-257

0.0100695894198326

Position on chromosome:

8:119201933-119201955

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCCUUU_GG___CC_____AUAU______	3'
		______G__UCU__UUUGU____UCUUAU
		______.__.\|\|__\|\|\|\|\|____\|\|\|\|\|\|
		______U__GGA__AAACA____AGAAUA
(miRNA)	3'	_____G_UU__________AGC_______	5'

UTR3

6mer

179-195

0.00439871308513849

Position on chromosome:

8:119201877-119201893

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAAGAGUUGAG_G_GG_A_____AC________	3'
		____________G_G__C____UG____UCUUAU
		____________._.__\|____\|\|____\|\|\|\|\|\|
		____________U_U__G____AC____AGAAUA
(miRNA)	3'	_____________G_UU_GAAA__AAGC______	5'

ENSG00000162694 (EXTL2)

hsa-miR-208b-3p

0.798941536958859

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1368-1388

0.00763313099037042

Position on chromosome:

1:101339311-101339331

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	ACUUUUGA_____AAGAA___G_______	3'
		________AAGCC_____GUU_GUCUUAU
		________\|\|.\|\|_____\|\|\|_\|\|\|\|\|\|\|
		________UUUGG_____CAA_CAGAAUA
(miRNA)	3'	_______G_____AAAA____G_______	5'

UTR3

6mer

754-781

0.00726826543564367

Position on chromosome:

1:101338697-101338724

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	U______GAGAA___A_AUUAAU______	3'
		_GACCUU_____UGU_C______UCUUAU
		_.\|\|\|\|\|_____\|\|\|_\|______\|\|\|\|\|\|
		_UUGGAA_____ACA_G______AGAAUA
(miRNA)	3'	U______A_______A_C___________	5'

UTR3

6mer

318-331

0.00411833375802412

Position on chromosome:

1:101338261-101338274

Conserved species:

panTro2

Binding area:

(Transcript)	5'	ACUUCUCUUUCUCCU_____C____C______	3'
		_______________CCUUU____C_UCUUAU
		_______________\|\|\|\|\|____\|_\|\|\|\|\|\|
		_______________GGAAA____G_AGAAUA
(miRNA)	3'	______________U_____ACAA_C______	5'

UTR3

6mer

293-313

0.00380625222041886

Position on chromosome:

1:101338236-101338256

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUAUUCCU____CUCCUC___CU______	3'
		________CCUU______UUC__UCUUAU
		________\|\|\|\|______\|\|\|__\|\|\|\|\|\|
		________GGAA______AAG__AGAAUA
(miRNA)	3'	_______U____AAC______C_______	5'

UTR3

6mer

152-158

0.00579839875534647

Position on chromosome:

1:101338095-101338101

Conserved species:

rn4,mm9,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUUUACAUUAAAGAGUAUAUG_______A	3'
		_____________________UGUCUUA_
		_____________________.\|\|\|\|\|\|_
		_____________________GCAGAAU_
(miRNA)	3'	____________________A_______A	5'

UTR3

6mer

41-57

0.00463101407868896

Position on chromosome:

1:101337984-101338000

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAUAUUGGUAGU_______UG__C______	3'
		____________ACUUUUU___C_UCUUAU
		____________\|\|.\|\|\|\|___\|_\|\|\|\|\|\|
		____________UGGAAAA___G_AGAAUA
(miRNA)	3'	___________U_______CAA_C______	5'

ENSG00000124333 (VAMP7)

hsa-miR-208b-3p

0.79671003840997

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

140-167

0.00874458644112683

Position on chromosome:

X:155171756-155171783

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	C__UG___CCAG___UAUCUU________	3'
		_CA__CCU____GUU______UGUCUUAU
		_\|\|__\|\|\|____\|\|\|______.\|\|\|\|\|\|\|
		_GU__GGA____CAA______GCAGAAUA
(miRNA)	3'	U__UU___AAA__________________	5'

UTR3

7mer

301-324

0.00830466066201896

Position on chromosome:

X:155171917-155171940

Conserved species:

rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUGCU____G__GUCGCCGCUA_______	3'
		_____CAAA_CU__________GUCUUAU
		_____\|\|\|\|_\|\|__________\|\|\|\|\|\|\|
		_____GUUU_GA__________CAGAAUA
(miRNA)	3'	____U____G__AAACAAG__________	5'

UTR3

6mer

519-544

0.00415934985501572

Position on chromosome:

X:155172135-155172160

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CAG______AAA____A__AAACAU______	3'
		___ACAAGU_____GU_UG______UCUUAU
		___\|\|\|\|.._____\|\|_.\|______\|\|\|\|\|\|
		___UGUUUG_____CA_GC______AGAAUA
(miRNA)	3'	_________GAAAA__A______________	5'

UTR3

6mer

1639-1661

0.01182068640218

Position on chromosome:

X:155173255-155173277

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AAGGUU____G___AU____CCUU______	3'
		______UAAA_CUU___UUC____UCUUAU
		______.\|\|\|_\|\|\|___\|\|\|____\|\|\|\|\|\|
		______GUUU_GAA___AAG____AGAAUA
(miRNA)	3'	_____U____G___AAC___C_________	5'

ENSG00000018236 (CNTN1)

hsa-miR-208b-3p

0.791986382539783

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

608-630

0.00617488483458019

Position on chromosome:

12:41464446-41464468

Conserved species:

panTro2,rn4,mm9,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	AUUCUA______ACUAUCAG_AU______	3'
		______GAACUU________U__UCUUAU
		______.\|\|\|.\|________\|__\|\|\|\|\|\|
		______UUUGGA________A__AGAAUA
(miRNA)	3'	_____G______AAACA____GC______	5'

UTR3

6mer

746-758

0.00435772957000473

Position on chromosome:

12:41464584-41464596

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	ACUCUGAAGUUAUUUU_UG________________	3'
		________________A__CUUU______UCUUAU
		________________\|__\|\|\|\|______\|\|\|\|\|\|
		________________U__GAAA______AGAAUA
(miRNA)	3'	_______________U_UG____ACAAGC______	5'

UTR3

6mer

765-790

0.00291138391178268

Position on chromosome:

12:41464603-41464628

Conserved species:

panTro2,canFam2,dasNov2

Binding area:

(Transcript)	5'	UUU_______CAAAAAUCACA_C______	3'
		___CAAAUCU___________G_UCUUAU
		___\|\|\|\|.\|\|___________\|_\|\|\|\|\|\|
		___GUUUGGA___________C_AGAAUA
(miRNA)	3'	__U_______AAACAAG____________	5'

UTR3

6mer

1678-1691

0.00508158907899366

Position on chromosome:

12:41465516-41465529

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCCCAGUGGAAGUA___CAACA______A	3'
		______________UGU_____GUCUUA_
		______________\|\|\|_____\|\|\|\|\|\|_
		______________ACA_____CAGAAU_
(miRNA)	3'	_____________A___AG_________A	5'

UTR3

7mer

2356-2363

0.014031081194225

Position on chromosome:

12:41466194-41466201

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	AAAUUAGUAUAAAGUAAUAAA________	3'
		_____________________UGUCUUAU
		_____________________.\|\|\|\|\|\|\|
		_____________________GCAGAAUA
(miRNA)	3'	____________________A________	5'

ENSG00000112796 (ENPP5)

hsa-miR-208b-3p

0.787632071524549

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1749-1772

0.0115265397968182

Position on chromosome:

6:46128673-46128696

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	AAUGC__UUU_UG_ACA____A________	3'
		_____AC___A__C____GUU_UGUCUUAU
		_____\|\|___\|__\|____\|\|\|_.\|\|\|\|\|\|\|
		_____UG___U__G____CAA_GCAGAAUA
(miRNA)	3'	_______U___UG_AAAA____________	5'

UTR3

7mer

1512-1527

0.00764164203416541

Position on chromosome:

6:46128436-46128451

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUGCAACUGUGG___UU_________________	3'
		_____________GCA__UCU______UGUCUUAU
		_____________.\|\|__.\|\|______.\|\|\|\|\|\|\|
		_____________UGU__GGA______GCAGAAUA
(miRNA)	3'	________________UU___AAACAA________	5'

UTR3

7mer

479-498

0.0129597871197942

Position on chromosome:

6:46127403-46127422

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGCUUCCUA______GG__AA________	3'
		_________AAAUUU__UG__UGUCUUAU
		_________\|\|\|..\|__\|\|__.\|\|\|\|\|\|\|
		_________UUUGGA__AC__GCAGAAUA
(miRNA)	3'	________G______AA__AA________	5'

ENSG00000163655 (GMPS)

hsa-miR-208b-3p

0.777390182845886

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

409-434

0.00439048618993971

Position on chromosome:

3:155655891-155655916

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAU________GAGAA__A_UUU______	3'
		___ACUUUUUG_____UC_G___UCUUAU
		___\|\|.\|\|\|\|\|_____\|\|_\|___\|\|\|\|\|\|
		___UGGAAAAC_____AG_C___AGAAUA
(miRNA)	3'	__U________A_________________	5'

UTR3

6mer

423-446

0.00310239527804944

Position on chromosome:

3:155655905-155655928

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGAAU___UUU____AUAAG_AA______	3'
		_____CAG___UCUU_____U__UCUUAU
		_____\|\|.___.\|\|\|_____\|__\|\|\|\|\|\|
		_____GUU___GGAA_____A__AGAAUA
(miRNA)	3'	____U___U______AACA__GC______	5'

UTR3

6mer

634-655

0.00501026406005994

Position on chromosome:

3:155656116-155656137

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	UGGUCU____UG___AUGAA_G______A	3'
		______CAGA__UCU_____U_GUCUUA_
		______\|\|.\|__.\|\|_____\|_\|\|\|\|\|\|_
		______GUUU__GGA_____A_CAGAAU_
(miRNA)	3'	_____U_________AAACA_G______A	5'

UTR3

6mer

1424-1442

0.00130575773419408

Position on chromosome:

3:155656906-155656924

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGCAAGGGA___G___C___C_______A	3'
		_________AGA_UUU_UGU_UGUCUUA_
		_________\|.\|_.\|\|_\|\|\|_.\|\|\|\|\|\|_
		_________UUU_GAA_ACA_GCAGAAU_
(miRNA)	3'	________G___G___A___A_______A	5'

UTR3

7mer

1674-1689

0.00255797664969059

Position on chromosome:

3:155657156-155657171

Conserved species:

panTro2,bosTau4

Binding area:

(Transcript)	5'	AAAAAAAAUUUCU____ACAG___________	3'
		_____________AGCC_______UGUCUUAU
		_____________\|.\|\|_______.\|\|\|\|\|\|\|
		_____________UUGG_______GCAGAAUA
(miRNA)	3'	____________U____AAAACAA________	5'

UTR3

6mer

4709-4737

0.00162393460265004

Position on chromosome:

3:155660191-155660219

Conserved species:

panTro2

Binding area:

(Transcript)	5'	________CCCAG__A_AAUAAAU______	3'
		_UAAAUCU_____UC_G_______UCUUAU
		_.\|\|\|.\|\|_____\|\|_\|_______\|\|\|\|\|\|
		_GUUUGGA_____AG_C_______AGAAUA
(miRNA)	3'	U_______AAACA_________________	5'

UTR3

7mer

4823-4842

0.00204479105935035

Position on chromosome:

3:155660305-155660324

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAUAGAGAU______GC__AAG_______	3'
		_________GGUCUU__UG___GUCUUAU
		_________...\|\|\|__\|\|___\|\|\|\|\|\|\|
		_________UUGGAA__AC___CAGAAUA
(miRNA)	3'	________U______A___AAG_______	5'

UTR3

7mer

5518-5539

0.00911058037102589

Position on chromosome:

3:155661000-155661021

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAGGUG_____AAUGAGACUC_______A	3'
		______ACAAG__________CGUCUUA_
		______\|\|\|\|.__________\|\|\|\|\|\|\|_
		______UGUUU__________GCAGAAU_
(miRNA)	3'	___________GGAAAACAA________A	5'

UTR3

6mer

5694-5715

0.00199805807643443

Position on chromosome:

3:155661176-155661197

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GGAAGCC________GAGCAGUA______	3'
		_______UAAACCUU________UCUUAU
		_______.\|\|\|\|\|\|\|________\|\|\|\|\|\|
		_______GUUUGGAA________AGAAUA
(miRNA)	3'	______U________AACAAGC_______	5'

ENSG00000158079 (PTPDC1)

hsa-miR-208b-3p

0.769749663201657

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

269-294

0.00686509775715211

Position on chromosome:

9:96870496-96870521

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UUU_____AUA_GG_____ACAU______	3'
		___UAAGU___U__UGUUU____UCUUAU
		___.\|\|..___\|__\|\|\|\|.____\|\|\|\|\|\|
		___GUUUG___A__ACAAG____AGAAUA
(miRNA)	3'	__U_____G___AA_____C_________	5'

UTR3

6mer

446-458

0.0107362362821057

Position on chromosome:

9:96870673-96870685

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UGAACUAAGAAAGUC___AAG___________A	3'
		_______________ACC_______UGUCUUA_
		_______________\|\|\|_______.\|\|\|\|\|\|_
		_______________UGG_______GCAGAAU_
(miRNA)	3'	______________U___AAAACAA_______A	5'

UTR3

7mer

1559-1577

0.0128299274158406

Position on chromosome:

9:96871786-96871804

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUGGGUUGCC__UC___GAAA__________	3'
		__________CA__CCU______UGUCUUAU
		__________\|\|__\|\|\|______.\|\|\|\|\|\|\|
		__________GU__GGA______GCAGAAUA
(miRNA)	3'	_________U__UU___AAACAA________	5'

ENSG00000134532 (SOX5)

hsa-miR-208b-3p

0.766317131177816

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4592-4616

0.0190291651108214

Position on chromosome:

12:23687032-23687056

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CUG__UGUU_____AAC____A______A	3'
		___AC____ACUUU___UGUU_GUCUUA_
		___\|\|____\|\|.\|\|___\|\|\|\|_\|\|\|\|\|\|_
		___UG____UGGAA___ACAA_CAGAAU_
(miRNA)	3'	_____UU_______A______G______A	5'

UTR3

6mer

4427-4443

0.00650945270727112

Position on chromosome:

12:23686867-23686883

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCUGCUACAUC_____A__GAA__________C	3'
		___________CAAGC_CU_______GUCUUA_
		___________\|\|\|.\|_\|\|_______\|\|\|\|\|\|_
		___________GUUUG_GA_______CAGAAU_
(miRNA)	3'	__________U________AAACAAG______A	5'

UTR3

6mer

801-813

0.00457774389307036

Position on chromosome:

12:23683241-23683253

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	UGUGACUGUUCCCAGA_G____________________	3'
		________________A_AAACCU_________CUUAU
		________________\|_\|\|\|\|\|\|_________\|\|\|\|\|
		________________U_UUUGGA_________GAAUA
(miRNA)	3'	_________________G______AAACAAGCA_____	5'

ENSG00000064933 (PMS1)

hsa-miR-208b-3p

0.760541760263477

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

589-607

0.00453667658483291

Position on chromosome:

2:190719018-190719036

Conserved species:

panTro2,rheMac2,rn4,canFam2

Binding area:

(Transcript)	5'	AUGGACCAUU____AGUACAAAU______	3'
		__________ACCU_________UCUUAU
		__________\|\|\|\|_________\|\|\|\|\|\|
		__________UGGA_________AGAAUA
(miRNA)	3'	_________U____AAACAAGC_______	5'

UTR3

8mer

1985-2009

0.0250570191040576

Position on chromosome:

2:190732598-190732622

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UCA__UU____GUC__AUCC________C	3'
		___AC__ACCU___UG____UCGUCUUA_
		___\|\|__\|\|\|\|___\|\|____\|\|\|\|\|\|\|\|_
		___UG__UGGA___AC____AGCAGAAU_
(miRNA)	3'	_____UU____AA___A___________A	5'

ENSG00000170312 (CDK1)

hsa-miR-208b-3p

0.75905908120402

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

57-80

0.0149311809433019

Position on chromosome:

10:62553791-62553814

Conserved species:

panTro2,rheMac2,monDom5

Binding area:

(Transcript)	5'	UUGUU___U___GUCUAUU__________	3'
		_____AAC_CUU_______UUUGUCUUAU
		_____\|\|\|_\|\|\|_______\|\|.\|\|\|\|\|\|\|
		_____UUG_GAA_______AAGCAGAAUA
(miRNA)	3'	____U_______AAC______________	5'

UTR3

6mer

581-605

0.00608337870973919

Position on chromosome:

10:62554315-62554339

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGA___UG__AAAA____CUAA______C	3'
		___GCA__CC____UUUG____GUCUUA_
		___.\|\|__\|\|____\|\|\|\|____\|\|\|\|\|\|_
		___UGU__GG____AAAC____CAGAAU_
(miRNA)	3'	______UU__A_______AAG_______A	5'

UTR3

6mer

648-667

0.00526447696686114

Position on chromosome:

10:62554382-62554401

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAGUUUUGA______AUGAACUA______	3'
		_________AAAUUU________UCUUAU
		_________\|\|\|..\|________\|\|\|\|\|\|
		_________UUUGGA________AGAAUA
(miRNA)	3'	________G______AAACAAGC______	5'

UTR3

6mer

685-711

0.00318187881784794

Position on chromosome:

10:62554419-62554445

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GA___________CUAAG__AAU______	3'
		__AAGCUUUUUGU_____UG___UCUUAU
		__\|\|.\|.\|\|\|\|\|\|_____.\|___\|\|\|\|\|\|
		__UUUGGAAAACA_____GC___AGAAUA
(miRNA)	3'	_G___________A_______________	5'

ENSG00000003989 (SLC7A2)

hsa-miR-208b-3p

0.756721906634485

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

11-31

0.021544141029184

Position on chromosome:

8:17422667-17422687

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGCAGGA_____G__G____CA________G	3'
		_______GCAGA_CU___GU__UCGUCUUA_
		_______.\|\|.\|_\|\|___\|\|__\|\|\|\|\|\|\|\|_
		_______UGUUU_GA___CA__AGCAGAAU_
(miRNA)	3'	____________G__AAA____________A	5'

UTR3

6mer

4530-4549

0.00465577798192983

Position on chromosome:

8:17427186-17427205

Conserved species:

panTro2,rheMac2,mm9,canFam2

Binding area:

(Transcript)	5'	UUGUUUGU___U__ACG______A______C	3'
		________AUA_AC_____GUUU_GUCUUA_
		________\|.\|_\|\|_____\|\|\|._\|\|\|\|\|\|_
		________UGU_UG_____CAAG_CAGAAU_
(miRNA)	3'	___________U__GAAAA___________A	5'

UTR3

6mer

4653-4667

0.00305281953813395

Position on chromosome:

8:17427309-17427323

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUGCCACUGCCAU____GC___G________A	3'
		_____________GAUC___UG___GUCUUA_
		_____________.\|.\|___\|\|___\|\|\|\|\|\|_
		_____________UUGG___AC___CAGAAU_
(miRNA)	3'	____________U____AAA__AAG______A	5'

ENSG00000166881 (TMEM194A)

hsa-miR-208b-3p

0.756700333971679

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

340-364

0.00421892210279359

Position on chromosome:

12:57449766-57449790

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUUU____AUAGCA__AG_ACAU______	3'
		____GCCU______UG__C____UCUUAU
		____.\|\|\|______\|\|__\|____\|\|\|\|\|\|
		____UGGA______AC__G____AGAAUA
(miRNA)	3'	___U____AA______AA_C_________	5'

UTR3

7mer

102-120

0.011511056430693

Position on chromosome:

12:57449528-57449546

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAGGGAUGGC_____GCCA__G_________	3'
		__________UCUUU____UG___GUCUUAU
		__________.\|\|\|\|____\|\|___\|\|\|\|\|\|\|
		__________GGAAA____AC___CAGAAUA
(miRNA)	3'	_________U___________AAG_______	5'

UTR3

6mer

62-72

0.0135208448410268

Position on chromosome:

12:57449488-57449498

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUCUGUAAGAAAAAAGA_____________________A	3'
		_________________ACAA__________UGUCUUA_
		_________________\|\|\|\|__________.\|\|\|\|\|\|_
		_________________UGUU__________GCAGAAU_
(miRNA)	3'	_____________________UGGAAAACAA_______A	5'

ENSG00000101558 (VAPA)

hsa-miR-208b-3p

0.754653358907981

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

496-511

0.0124398155278195

Position on chromosome:

18:9954705-9954720

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGCUAAUAUCAUG_____A________________	3'
		_____________GCAGA_UUUU______UCUUAU
		_____________.\|\|.\|_.\|\|\|______\|\|\|\|\|\|
		_____________UGUUU_GAAA______AGAAUA
(miRNA)	3'	__________________G____ACAAGC______	5'

UTR3

6mer

980-1002

0.00296955869275137

Position on chromosome:

18:9955189-9955211

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUUA__C_____AAUAAAUAA______C	3'
		_____AC_AGCCU_________GUCUUA_
		_____\|\|_\|.\|\|\|_________\|\|\|\|\|\|_
		_____UG_UUGGA_________CAGAAU_
(miRNA)	3'	_______U_____AAACAAG________A	5'

UTR3

7mer

1717-1735

0.00493086723792359

Position on chromosome:

18:9955926-9955944

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGGAAAAGC_UG__AAAAAUA_______	3'
		__________A__CU_______GUCUUAU
		__________\|__\|\|_______\|\|\|\|\|\|\|
		__________U__GA_______CAGAAUA
(miRNA)	3'	_________U_UG__AAACAAG_______	5'

UTR3

6mer

1760-1787

0.00139615258051393

Position on chromosome:

18:9955969-9955996

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2

Binding area:

(Transcript)	5'	U___UAAUU____GGCUUAAA_C______	3'
		_CAG_____CCUU________G_UCUUAU
		_\|\|._____\|\|\|\|________\|_\|\|\|\|\|\|
		_GUU_____GGAA________C_AGAAUA
(miRNA)	3'	U___U________AACAAG__________	5'

UTR3

6mer

2121-2144

0.00191209435563383

Position on chromosome:

18:9956330-9956353

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAAUA______AUA____GAAAUU______	3'
		_____ACAAGU____UGU______UCUUAU
		_____\|\|\|\|..____\|\|\|______\|\|\|\|\|\|
		_____UGUUUG____ACA______AGAAUA
(miRNA)	3'	___________GAAA___AGC_________	5'

UTR3

6mer

2683-2705

0.00126070665497024

Position on chromosome:

18:9956892-9956914

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAAUGU_____AAC___CCCCAU______	3'
		______ACCUU___UUC______UCUUAU
		______\|\|\|\|\|___\|\|\|______\|\|\|\|\|\|
		______UGGAA___AAG______AGAAUA
(miRNA)	3'	_____U_____AAC___C___________	5'

UTR3

6mer

5094-5110

0.00416042305720225

Position on chromosome:

18:9959303-9959319

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGAAAUGUCUU____A_______________A	3'
		___________UAAG_UUUUUG___GUCUUA_
		___________.\|\|._.\|\|\|\|\|___\|\|\|\|\|\|_
		___________GUUU_GAAAAC___CAGAAU_
(miRNA)	3'	__________U____G______AAG______A	5'

ENSG00000155011 (DKK2)

hsa-miR-208b-3p

0.753015257386186

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

538-557

0.00538027240613967

Position on chromosome:

4:107843497-107843516

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GAGCACAAA____UAAAAG____A_______	3'
		_________ACAA_______GUU__UCUUAU
		_________\|\|\|\|_______\|\|\|__\|\|\|\|\|\|
		_________UGUU_______CAA__AGAAUA
(miRNA)	3'	_____________UGGAAAA___GC______	5'

UTR3

6mer

191-206

0.00522196592209542

Position on chromosome:

4:107843150-107843165

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAAUUUGGUUUCU____UA________________	3'
		_____________GCAA___UUUU_____UCUUAU
		_____________.\|\|\|___\|\|\|\|_____\|\|\|\|\|\|
		_____________UGUU___AAAA_____AGAAUA
(miRNA)	3'	_________________UGG____CAAGC______	5'

UTR3

6mer

119-131

0.01832310325708

Position on chromosome:

4:107843078-107843090

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GGAAAUGUUAAUGAGA___AUUU______	3'
		________________UGU____UCUUAU
		________________\|\|\|____\|\|\|\|\|\|
		________________ACA____AGAAUA
(miRNA)	3'	_______________A___AGC_______	5'

ENSG00000175893 (ZDHHC21)

hsa-miR-208b-3p

0.749713599278467

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

7782-7795

0.00268754671366399

Position on chromosome:

9:14618851-14618864

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUCAAUUAAAAUCC__CC___A_____________G	3'
		______________AC__ACC________GUCUUA_
		______________\|\|__\|\|\|________\|\|\|\|\|\|_
		______________UG__UGG________CAGAAU_
(miRNA)	3'	________________UU___AAAACAAG______A	5'

UTR3

6mer

7458-7471

0.00507578735267064

Position on chromosome:

9:14618527-14618540

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUUUACAAAAGUUG___C__________________	3'
		_______________AUA_ACCU________UCUUAU
		_______________\|.\|_\|\|\|\|________\|\|\|\|\|\|
		_______________UGU_UGGA________AGAAUA
(miRNA)	3'	__________________U____AAACAAGC______	5'

UTR3

6mer

5847-5869

0.00235553035813147

Position on chromosome:

9:14616916-14616938

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUUCCC__UCU___GA_____GC_______	3'
		______AC___GAU__UUUGU___UCUUAU
		______\|\|___.\|.__\|\|\|\|\|___\|\|\|\|\|\|
		______UG___UUG__AAACA___AGAAUA
(miRNA)	3'	________U_____GA_____AGC______	5'

UTR3

6mer

5567-5595

0.00194540505241474

Position on chromosome:

9:14616636-14616664

Conserved species:

panTro2

Binding area:

(Transcript)	5'	__UCU___GUGGGU______AAU______	3'
		AC___CCU______UUUGUU___UCUUAU
		\|\|___\|\|\|______\|\|\|\|\|\|___\|\|\|\|\|\|
		UG___GGA______AAACAA___AGAAUA
(miRNA)	3'	__UUU_______________GC_______	5'

UTR3

6mer

4905-4928

0.00142561848331054

Position on chromosome:

9:14615974-14615997

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAUCU__________A__AACAAUU______	3'
		_____AUAG__UUUU_GU_______UCUUAU
		_____\|.\|.__.\|\|\|_\|\|_______\|\|\|\|\|\|
		_____UGUU__GAAA_CA_______AGAAUA
(miRNA)	3'	_________UG____A__AGC__________	5'

UTR3

6mer

2131-2155

0.00224430311838892

Position on chromosome:

9:14613200-14613224

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUAA____A_________AUUAACAGA______	3'
		____GAAC_____GUUUG_________UCUUAU
		____.\|\|\|_____\|\|\|.\|_________\|\|\|\|\|\|
		____UUUG_____CAAGC_________AGAAUA
(miRNA)	3'	___G____GAAAA____________________	5'

UTR3

6mer

28-49

0.0129022953011156

Position on chromosome:

9:14611097-14611118

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	AUUAAGU__UGU________AAA_______	3'
		_______AC___AUUUUUUG____UCUUAU
		_______\|\|___\|..\|\|\|\|\|____\|\|\|\|\|\|
		_______UG___UGGAAAAC____AGAAUA
(miRNA)	3'	_________UU_________AAGC______	5'

ENSG00000108091 (CCDC6)

hsa-miR-208b-3p

0.748091499320558

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2216-2236

0.00208387700813271

Position on chromosome:

10:61550737-61550757

Conserved species:

panTro2,rheMac2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUCAUGGU____U___CA_____U______	3'
		________ACAG_UCU___GUUU_UCUUAU
		________\|\|\|._.\|\|___\|\|\|._\|\|\|\|\|\|
		________UGUU_GGA___CAAG_AGAAUA
(miRNA)	3'	____________U___AAA____C______	5'

UTR3

6mer

948-970

0.00334829710730394

Position on chromosome:

10:61549469-61549491

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	GCUUUG___G__CAAUA_____A________	3'
		______AGA_CU_____UUUGU___UCUUAU
		______\|.\|_\|\|_____\|\|\|\|\|___\|\|\|\|\|\|
		______UUU_GA_____AAACA___AGAAUA
(miRNA)	3'	_____G___G____________AGC______	5'

UTR3

7mer

892-917

0.00344059329029338

Position on chromosome:

10:61549413-61549438

Conserved species:

rheMac2,dasNov2

Binding area:

(Transcript)	5'	CUU______C___CUAGUAC_________	3'
		___GAUCUU_UGU_______UUGUCUUAU
		___.\|.\|\|\|_\|\|\|_______\|.\|\|\|\|\|\|\|
		___UUGGAA_ACA_______AGCAGAAUA
(miRNA)	3'	__U______A___________________	5'

UTR3

7mer

77-98

0.0196227355033745

Position on chromosome:

10:61548598-61548619

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AGAUGUA_______CAAUUAA________	3'
		_______AGACUUU_______UGUCUUAU
		_______\|.\|\|.\|\|_______.\|\|\|\|\|\|\|
		_______UUUGGAA_______GCAGAAUA
(miRNA)	3'	______G_______AACAA__________	5'

ENSG00000138738 (PRDM5)

hsa-miR-208b-3p

0.746788707774117

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3076-3095

0.00848258742307667

Position on chromosome:

4:121616146-121616165

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	AAGUGACUU__UG____CAUA___________	3'
		_________AC__GUCU____GU___UCUUAU
		_________\|\|__..\|\|____\|\|___\|\|\|\|\|\|
		_________UG__UGGA____CA___AGAAUA
(miRNA)	3'	___________UU____AAA___AGC______	5'

UTR3

6mer

3025-3042

0.0050587094560002

Position on chromosome:

4:121616095-121616112

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUGCAUAUGC____AAAAAAAA______C	3'
		__________AACC________GUCUUA_
		__________\|\|\|\|________\|\|\|\|\|\|_
		__________UUGG________CAGAAU_
(miRNA)	3'	_________U____AAAACAAG______A	5'

UTR3

7mer

2946-2973

0.00762388123169485

Position on chromosome:

4:121616016-121616043

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U_____AUGCAA___G__C__U_______	3'
		_GCAAA______CUU_UG_UC_GUCUUAU
		_.\|\|\|\|______\|\|\|_\|\|_\|\|_\|\|\|\|\|\|\|
		_UGUUU______GAA_AC_AG_CAGAAUA
(miRNA)	3'	______G________A__A__________	5'

UTR3

6mer

886-911

0.00267215769279961

Position on chromosome:

4:121613956-121613981

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GC______AAUCAUAAGGAAAA______C	3'
		__AUAGAU______________GUCUUA_
		__\|.\|.\|.______________\|\|\|\|\|\|_
		__UGUUUG______________CAGAAU_
(miRNA)	3'	________GAAAACAAG___________A	5'

UTR3

6mer

320-332

0.00454537156866993

Position on chromosome:

4:121613390-121613402

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GUGUGAACAUGUAUU_____AG______________C	3'
		_______________ACAGA__________GUCUUA_
		_______________\|\|\|.\|__________\|\|\|\|\|\|_
		_______________UGUUU__________CAGAAU_
(miRNA)	3'	____________________GGAAAACAAG______A	5'