DIANA TOOLS - MicroT-CDS

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Results: 1722 targets for miRNAs hsa-miR-200c-3p

. Threshold is set to 0.7.

Name:	hsa-miR-200c-3p
Alternative description:	MIMAT0000617
Related names:
miRNA sequence:	uaauacugccggguaaugaugga
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Anemia, Sickle Cell Anoxia Asthma Autoimmune Diseases Bites and Stings Breast Neoplasms Breast Neoplasms, Male Carcinoma Carcinoma, Embryonal Carcinoma, Endometrioid Carcinoma, Hepatocellular Carcinoma, Pancreatic Ductal Carcinoma, Papillary Carcinoma, Renal Cell Carcinoma, Squamous Cell Cardiomyopathies Cell Transformation, Neoplastic Cholangiocarcinoma Chromosome Deletion Colonic Neoplasms Colorectal Neoplasms Cystadenocarcinoma, Serous Deafness Dermatitis, Atopic Diabetes Mellitus Diabetes Mellitus, Type 2 Diabetic Nephropathies Diabetic Retinopathy Disease Models, Animal Disease Progression Echinococcosis Endodermal Sinus Tumor Endometrial Neoplasms Endometriosis Esophageal Neoplasms Facial Neoplasms Fatty Liver Genetic Predisposition to Disease Genomic Instability Germinoma Glioblastoma Head and Neck Neoplasms Hematologic Neoplasms Hepatitis C, Chronic Hodgkin Disease Hyperglycemia Hyperinsulinism Hypothyroidism Inflammation Influenza in Birds Insulin Resistance Kidney Neoplasms Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myelogenous, Chronic, BCR-ABL Positive Listeriosis Liver Cirrhosis Liver Neoplasms Liver Neoplasms, Experimental Lung Neoplasms Lupus Erythematosus, Systemic Lupus Nephritis Lymphatic Metastasis Mammary Neoplasms, Experimental Melanoma Meningeal Neoplasms Meningioma Mesothelioma Metabolic Syndrome X Mouth Neoplasms Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasms Neoplasms, Germ Cell and Embryonal Nerve Sheath Neoplasms Neuroblastoma Ovarian Neoplasms Pancreatic Neoplasms Pancreatitis, Chronic Pleural Neoplasms Polycystic Kidney Diseases Polycythemia Vera Poultry Diseases Prostatic Neoplasms Psoriasis Rectal Neoplasms Schistosomiasis japonica Seminoma Stomach Neoplasms Teratoma Testicular Neoplasms Thrombocythemia, Essential Thyroid Neoplasms Urinary Bladder Neoplasms Uterine Cervical Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000169554 (ZEB2)

hsa-miR-200c-3p

0.999999287723076

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

4972-4995

0.0396487599230501

Position on chromosome:

2:145146620-145146643

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,fr2

Binding area:

(Transcript)	5'	GGUG__CG__C____AUACAU_______U	3'
		____CC__CA_UACC______CAGUAUU_
		____\|\|__\|\|_\|\|\|\|______\|\|\|\|\|\|\|_
		____GG__GU_AUGG______GUCAUAA_
(miRNA)	3'	___A__UA__A____GCC__________U	5'

UTR3

8mer

4908-4932

0.0419521942483679

Position on chromosome:

2:145146556-145146580

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGUG__CG__C___AA__CAU________	3'
		____CU__CA_UAC__UG___CAGUAUUA
		____\|.__\|\|_\|\|\|__.\|___\|\|\|\|\|\|\|\|
		____GG__GU_AUG__GC___GUCAUAAU
(miRNA)	3'	___A__UA__A___G___C__________	5'

UTR3

8mer

4550-4565

0.076909584950278

Position on chromosome:

2:145146198-145146213

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UGUUCUUUGAAGC____AUGU________	3'
		_____________ACCC____CAGUAUUA
		_____________\|\|\|\|____\|\|\|\|\|\|\|\|
		_____________UGGG____GUCAUAAU
(miRNA)	3'	____________A____CC__________	5'

UTR3

8mer

4465-4486

0.0651146426944741

Position on chromosome:

2:145146113-145146134

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUUUUUG_______AU_____U________	3'
		_______UUCAUUA___UUUG_CAGUAUUA
		_______\|.\|\|\|.\|___...\|_\|\|\|\|\|\|\|\|
		_______AGGUAGU___GGGC_GUCAUAAU
(miRNA)	3'	______________AAU____C________	5'

UTR3

8mer

4334-4357

0.0388844967889512

Position on chromosome:

2:145145982-145146005

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	UUUAU_____A________UAGUGUA________	3'
		_____UUCAU______CUG_______CAGUAUUA
		_____\|.\|\|\|______\|.\|_______\|\|\|\|\|\|\|\|
		_____AGGUA______GGC_______GUCAUAAU
(miRNA)	3'	__________GUAAUG___C______________	5'

UTR3

7mer

4001-4027

0.0163008676266947

Position on chromosome:

2:145145649-145145675

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UU___UGA______UU__UAAA_______	3'
		__UCC___AUUGUC__UG____AGUAUUA
		__\|\|\|___\|\|\|..\|__.\|____\|\|\|\|\|\|\|
		__AGG___UAAUGG__GC____UCAUAAU
(miRNA)	3'	_____UAG__________CG_________	5'

UTR3

6mer

3639-3661

0.00377898278168014

Position on chromosome:

2:145145287-145145309

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	ACAUU____CUU____AUUA__________U	3'
		_____UCUA___UUGC____CG__AGUAUU_
		_____\|\|.\|___\|\|.\|____\|\|__\|\|\|\|\|\|_
		_____AGGU___AAUG____GC__UCAUAA_
(miRNA)	3'	_________AGU____G_____CG______U	5'

UTR3

6mer

1778-1794

0.00168399799705198

Position on chromosome:

2:145143426-145143442

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAUUUGAAUAAA___GAAUAAAU_______	3'
		____________UAU_________GUAUUA
		____________.\|\|_________\|\|\|\|\|\|
		____________GUA_________CAUAAU
(miRNA)	3'	___________A___AUGGGCCGU______	5'

UTR3

7mer

2069-2094

0.0187640190669362

Position on chromosome:

2:145157178-145157203

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAG____AAUGG____ACUAAA_______	3'
		___UCAU_____UGCC______AGUAUUA
		___.\|\|\|_____\|.\|\|______\|\|\|\|\|\|\|
		___GGUA_____AUGG______UCAUAAU
(miRNA)	3'	__A____GUA______GCCG_________	5'

UTR3

7mer

1154-1167

0.0121335999949976

Position on chromosome:

2:145156263-145156276

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAAACAAAUGAAAGA____AAA_______	3'
		_______________ACCC___AGUAUUA
		_______________\|\|\|\|___\|\|\|\|\|\|\|
		_______________UGGG___UCAUAAU
(miRNA)	3'	______________A____CCG_______	5'

UTR3

7mer

894-914

0.00485371817254504

Position on chromosome:

2:145156003-145156023

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUCAUG___C__GU___AGAC_______C	3'
		_______CCA_CA___CC____CAGUAUU_
		_______\|\|\|_\|\|___\|\|____\|\|\|\|\|\|\|_
		_______GGU_GU___GG____GUCAUAA_
(miRNA)	3'	______A___A__AAU__GCC________U	5'

ENSG00000148516 (ZEB1)

hsa-miR-200c-3p

0.999996256304857

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3862-3890

0.046519451231882

Position on chromosome:

10:31816540-31816568

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	___GG_____UUUUA___UAU________	3'
		UCU__CAUUG_____UCU___CAGUAUUA
		\|\|.__\|\|\|\|._____.\|.___\|\|\|\|\|\|\|\|
		AGG__GUAAU_____GGG___GUCAUAAU
(miRNA)	3'	___UA_____________CC_________	5'

UTR3

7mer

3959-3983

0.00826416277661664

Position on chromosome:

10:31816637-31816661

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,danRer6

Binding area:

(Transcript)	5'	AAA___AUGCUAA_____CUU_______U	3'
		___CAU_______AUCCG___CAGUAUU_
		___\|\|\|_______\|.\|\|\|___\|\|\|\|\|\|\|_
		___GUA_______UGGGC___GUCAUAA_
(miRNA)	3'	__G___GUAA________C_________U	5'

UTR3

6mer

4119-4137

0.00146490451684876

Position on chromosome:

10:31816797-31816815

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUAUUUAGAU_______G_A_A_________	3'
		__________GUC_UUA_U_G_GC_GUAUUA
		__________.\|\|_\|\|\|_._\|_\|\|_\|\|\|\|\|\|
		__________UAG_AAU_G_C_CG_CAUAAU
(miRNA)	3'	_________G___U___G_G____U______	5'

UTR3

7mer

4398-4412

0.0108362447622186

Position on chromosome:

10:31817076-31817090

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGUGCUGUAAGUG_____________________U	3'
		_____________CCAUU____UCU__CAGUAUU_
		_____________\|\|\|\|.____.\|.__\|\|\|\|\|\|\|_
		_____________GGUAG____GGG__GUCAUAA_
(miRNA)	3'	____________A_____UAAU___CC_______U	5'

UTR3

8mer

4745-4764

0.0755303460819893

Position on chromosome:

10:31817423-31817442

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2,tetNig2,danRer6

Binding area:

(Transcript)	5'	CAUUAGCUG___U______AU________	3'
		_________AUU_UUACCU__CAGUAUUA
		_________\|\|._\|\|\|\|\|.__\|\|\|\|\|\|\|\|
		_________UAG_AAUGGG__GUCAUAAU
(miRNA)	3'	________G___U______CC________	5'

UTR3

9mer

4814-4834

0.0497688412460232

Position on chromosome:

10:31817492-31817512

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,fr2,danRer6

Binding area:

(Transcript)	5'	ACUGUAUG__U___A_______________	3'
		________UC_UCA__ACCUGGCAGUAUUA
		________.\|_\|\|\|__\|\|\|.\|\|\|\|\|\|\|\|\|\|
		________GG_AGU__UGGGCCGUCAUAAU
(miRNA)	3'	_______A__U___AA______________	5'

UTR3

6mer

4930-4953

0.00456597794617641

Position on chromosome:

10:31817608-31817631

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UGUAG_G___AAUA_____UA_UUU______	3'
		_____U_UAU______CUG__G___GUAUUA
		_____\|_.\|\|______\|.\|__.___\|\|\|\|\|\|
		_____A_GUA______GGC__U___CAUAAU
(miRNA)	3'	______G___GUAAUG___CG__________	5'

UTR3

6mer

5088-5111

0.00494721633874387

Position on chromosome:

10:31817766-31817789

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UAGAA__GAAC___AA___G_AU______	3'
		_____CA____UUA__UGG_A__GUAUUA
		_____\|\|____\|\|\|__.\|\|_\|__\|\|\|\|\|\|
		_____GU____AAU__GCC_U__CAUAAU
(miRNA)	3'	____G__AGU____GG___G_________	5'

UTR3

7mer

5467-5484

0.0130333750797722

Position on chromosome:

10:31818145-31818162

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUCAUUCUU______________________U	3'
		__________UUCAUCAUUAU____CAGUAUU_
		__________\|.\|\|\|\|\|\|\|\|.____\|\|\|\|\|\|\|_
		__________AGGUAGUAAUG____GUCAUAA_
(miRNA)	3'	_____________________GGCC_______U	5'

ENSG00000134532 (SOX5)

hsa-miR-200c-3p

0.999992676472597

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3064-3089

0.00120706444114046

Position on chromosome:

12:23685504-23685529

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AG____A_U___GU__AA__AG______U	3'
		__UCCA_C_UUG__UC__GC__AGUAUU_
		__\|\|\|\|_\|_\|\|.__.\|__\|\|__\|\|\|\|\|\|_
		__AGGU_G_AAU__GG__CG__UCAUAA_
(miRNA)	3'	______A_U_______GC__________U	5'

UTR3

7mer

561-578

0.0212630252005744

Position on chromosome:

12:23683001-23683018

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUUGGUUUAG___G________UUA_______U	3'
		__________CCA_____GCUU___CAGUAUU_
		__________\|\|\|_____.\|..___\|\|\|\|\|\|\|_
		__________GGU_____UGGG___GUCAUAA_
(miRNA)	3'	_________A___AGUAA____CC________U	5'

UTR3

7mer

438-465

0.0322272049070534

Position on chromosome:

12:23682878-23682905

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	_______________UUCACUAAAA_______U	3'
		UCCGUCA____CUGG__________CAGUAUU_
		\|\|\|.\|\|\|____\|.\|\|__________\|\|\|\|\|\|\|_
		AGGUAGU____GGCC__________GUCAUAA_
(miRNA)	3'	_______AAUG_____________________U	5'

UTR3

8mer

41-61

0.160249778259318

Position on chromosome:

12:23682481-23682501

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUUUUUUG____C___UUUUU________	3'
		________CAUU_UCC_____CAGUAUUA
		________\|\|\|\|_.\|\|_____\|\|\|\|\|\|\|\|
		________GUAA_GGG_____GUCAUAAU
(miRNA)	3'	_______A____U___CC___________	5'

UTR3

7mer

1796-1817

0.0135704710708551

Position on chromosome:

12:23908644;23998917-23908658;23998923

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAACGAG___GAAGAA____C_________	3'
		_______CCG______ACCC__CAGUAUUG
		_______\|\|.______\|\|\|\|__\|\|\|\|\|\|\|.
		_______GGU______UGGG__GUCAUAAU
(miRNA)	3'	______A___AGUAA_____CC________	5'

ENSG00000176165 (FOXG1)

hsa-miR-200c-3p

0.999990957362242

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

294-321

0.175558462037501

Position on chromosome:

14:29238250-29238277

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	G___C__GAUUU__AUG__U_________	3'
		_CCG_CA_____CC___UG_GCAGUAUUA
		_\|\|._\|\|_____\|\|___.\|_\|\|\|\|\|\|\|\|\|
		_GGU_GU_____GG___GC_CGUCAUAAU
(miRNA)	3'	A___A__AAU___________________	5'

UTR3

7mer

543-562

0.0249586049045981

Position on chromosome:

14:29238499-29238518

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AGAAAAUGC_______AUACUA_______	3'
		_________ACUUGGU______AGUAUUA
		_________\|\|..\|\|.______\|\|\|\|\|\|\|
		_________UGGGCCG______UCAUAAU
(miRNA)	3'	________A____________________	5'

ENSG00000150625 (GPM6A)

hsa-miR-200c-3p

0.999944632374542

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

728-746

0.047771351526982

Position on chromosome:

4:176554813-176554831

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GGAAUUUUAA__AAG_G_AAU________	3'
		__________CA___A_C___CAGUAUUA
		__________\|\|___\|_\|___\|\|\|\|\|\|\|\|
		__________GU___U_G___GUCAUAAU
(miRNA)	3'	_________A__AA__G_GCC________	5'

UTR3

7mer

401-425

0.018665641364196

Position on chromosome:

4:176554486-176554510

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,monDom5,galGal3

Binding area:

(Transcript)	5'	GUGG___G____UGCAU_____________	3'
		____CAU_AUUA_____UCC_GUAGUAUUA
		____\|\|\|_\|\|\|\|_____.\|\|_\|.\|\|\|\|\|\|\|
		____GUA_UAAU_____GGG_CGUCAUAAU
(miRNA)	3'	___G___G____________C_________	5'

UTR3

9mer

312-340

0.0732235994969267

Position on chromosome:

4:176554397-176554425

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	____A____UU____AUAUAU_________	3'
		_UCA_CAUU__UCUG______GCAGUAUUA
		_.\|\|_\|\|\|\|__.\|.\|______\|\|\|\|\|\|\|\|\|
		_GGU_GUAA__GGGC______CGUCAUAAU
(miRNA)	3'	A___A____U____________________	5'

UTR3

7mer

290-316

0.019625123936089

Position on chromosome:

4:176554375-176554401

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AG_____CAGA_____A__AAA_______	3'
		__UAUUA____UAUUC_GC___AGUAUUA
		__.\|\|.\|____\|\|..\|_\|\|___\|\|\|\|\|\|\|
		__GUAGU____AUGGG_CG___UCAUAAU
(miRNA)	3'	_G_____A________C____________	5'

UTR3

6mer

258-273

0.00391170132918324

Position on chromosome:

4:176554343-176554358

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GCUUCUUUAAAU______________________U	3'
		____________UCUA_UAUUA_____UAGUAUU_
		____________\|\|.\|_.\|\|\|\|_____.\|\|\|\|\|\|_
		____________AGGU_GUAAU_____GUCAUAA_
(miRNA)	3'	________________A_____GGGCC_______U	5'

UTR3

6mer

162-188

0.00770293367437658

Position on chromosome:

4:176554247-176554273

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GA__CU_______UUUUAUUUCU_______	3'
		__CA___UUUGGC__________GGUAUUA
		__\|\|___...\|\|\|__________.\|\|\|\|\|\|
		__GU___GGGCCG__________UCAUAAU
(miRNA)	3'	_A__AAU_______________________	5'

ENSG00000107036 (KIAA1432)

hsa-miR-200c-3p

0.999944231041367

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

9-31

0.107864127809698

Position on chromosome:

9:5774256-5774278

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5,xenTro2

Binding area:

(Transcript)	5'	UGAGGU_______CAAAGG__________	3'
		______UCCAUCA______GGCAGUAUUA
		______\|\|\|\|\|\|\|______\|\|\|\|\|\|\|\|\|\|
		______AGGUAGU______CCGUCAUAAU
(miRNA)	3'	_____________AAUGGG__________	5'

UTR3

7mer

92-120

0.015810842072419

Position on chromosome:

9:5774339-5774367

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	____GU___GAG__UCU_____A_______	3'
		_UCA__UCA___AC___UCGGU_AGUAUUA
		_.\|\|__\|\|\|___\|\|___.\|\|\|._\|\|\|\|\|\|\|
		_GGU__AGU___UG___GGCCG_UCAUAAU
(miRNA)	3'	A________AA___________________	5'

UTR3

6mer

682-702

0.00333653199996435

Position on chromosome:

9:5774929-5774949

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GUUAGAUA_____UAA___AUUUU______	3'
		________CCA_C___ACU_____GUAUUA
		________\|\|\|_\|___\|\|._____\|\|\|\|\|\|
		________GGU_G___UGG_____CAUAAU
(miRNA)	3'	_______A___A_UAA___GCCGU______	5'

UTR3

6mer

756-778

0.00304830966967729

Position on chromosome:

9:5775003-5775025

Conserved species:

panTro2,rheMac2,mm9,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	GCACUG_________U_AG___UU______	3'
		______UUCA_UAUU_U__GGC__GUAUUA
		______\|.\|\|_.\|\|\|_.__\|\|\|__\|\|\|\|\|\|
		______AGGU_GUAA_G__CCG__CAUAAU
(miRNA)	3'	__________A____U_GG___U_______	5'

UTR3

6mer

1006-1016

0.00343927090241516

Position on chromosome:

9:5775253-5775263

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	AUGUAAAUAGACUGCUGA____U_________	3'
		__________________AUCC____GUAUUA
		__________________\|.\|\|____\|\|\|\|\|\|
		__________________UGGG____CAUAAU
(miRNA)	3'	_________________A____CCGU______	5'

UTR3

6mer

1052-1076

0.00213431129667101

Position on chromosome:

9:5775299-5775323

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	GCA___U______UAAA__UAA______U	3'
		___UUC_UCAUUG____CU___AGUAUU_
		___\|.\|_\|\|\|\|\|.____\|.___\|\|\|\|\|\|_
		___AGG_AGUAAU____GG___UCAUAA_
(miRNA)	3'	______U______G_____CCG______U	5'

UTR3

8mer

1174-1198

0.053291991765696

Position on chromosome:

9:5775421-5775445

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GUAA___UA________UAUAA________	3'
		____UUC___AUUACCU_____CAGUAUUA
		____\|.\|___\|\|\|\|\|\|._____\|\|\|\|\|\|\|\|
		____AGG___UAAUGGG_____GUCAUAAU
(miRNA)	3'	_______UAG_______CC___________	5'

UTR3

6mer

1470-1490

0.00311183666270786

Position on chromosome:

9:5775717-5775737

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGCUUAG____GAA____A___A_______U	3'
		_______UUCA____UAC_UCG__AGUAUU_
		_______\|.\|\|____\|\|\|_.\|\|__\|\|\|\|\|\|_
		_______AGGU____AUG_GGC__UCAUAA_
(miRNA)	3'	___________AGUA_______CG______U	5'

UTR3

7mer

1814-1836

0.0119531378242176

Position on chromosome:

9:5756334-5756356

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AGACUG____A___GC___UA________	3'
		______UUCA_UAU__CUU__CAGUAUUG
		______\|.\|\|_.\|\|__\|..__\|\|\|\|\|\|\|.
		______AGGU_GUA__GGG__GUCAUAAU
(miRNA)	3'	__________A___AU___CC________	5'

UTR3

8mer

3606-3633

0.0190046912118644

Position on chromosome:

9:5770269;5772564-5770278;5772581

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	A____A__AAGG__A___AAU_________	3'
		_UCUA_UA____UG__UG___GCAGUAUUG
		_\|\|.\|_.\|____\|.__.\|___\|\|\|\|\|\|\|\|.
		_AGGU_GU____AU__GC___CGUCAUAAU
(miRNA)	3'	_____A__A_____GG______________	5'

ENSG00000164985 (PSIP1)

hsa-miR-200c-3p

0.99992281070486

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1269-1297

0.165469460059078

Position on chromosome:

9:15465333-15465361

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	_______CUAAGUG______U_________	3'
		_UUAUCG_______UACUUG_GCAGUAUUA
		_..\|\|\|._______\|\|\|..\|_\|\|\|\|\|\|\|\|\|
		_GGUAGU_______AUGGGC_CGUCAUAAU
(miRNA)	3'	A______A______________________	5'

ENSG00000110422 (HIPK3)

hsa-miR-200c-3p

0.999877181763173

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

363-385

0.00689118832422709

Position on chromosome:

11:33375478-33375500

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	GAAUUA__G______AA_U_AAUU______	3'
		______CA_CA_UAC__G_G____GUAUUA
		______\|\|_\|\|_\|\|\|__\|_\|____\|\|\|\|\|\|
		______GU_GU_AUG__C_C____CAUAAU
(miRNA)	3'	_____G__A__A___GG___GU________	5'

UTR3

8mer

1031-1043

0.0400042908765157

Position on chromosome:

11:33376146-33376158

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	UCUUAGCUUGGGCAA___AU________U	3'
		_______________ACC__GCAGUAUU_
		_______________\|\|\|__\|\|\|\|\|\|\|\|_
		_______________UGG__CGUCAUAA_
(miRNA)	3'	______________A___GC________U	5'

UTR3

6mer

1147-1152

0.00332404259798821

Position on chromosome:

11:33376262-33376267

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	GAGAGGGUUUUUUUUUUUUUUA______U	3'
		______________________AGUAUU_
		______________________\|\|\|\|\|\|_
		______________________UCAUAA_
(miRNA)	3'	_____________________G______U	5'

UTR3

6mer

1430-1447

0.00345783948777547

Position on chromosome:

11:33376545-33376562

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	GUAAAGGUGGA___UAA___AAA_______	3'
		___________AUU____GG___GGUAUUA
		___________\|\|\|____\|\|___.\|\|\|\|\|\|
		___________UAA____CC___UCAUAAU
(miRNA)	3'	__________G___UGGG__G_________	5'

UTR3

7mer

1726-1743

0.0138483211191108

Position on chromosome:

11:33376841-33376858

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	UUUGGGGUGU______UG_AU________U	3'
		__________GUUAUU__C___CAGUAUU_
		__________.\|.\|\|\|__\|___\|\|\|\|\|\|\|_
		__________UAGUAA__G___GUCAUAA_
(miRNA)	3'	_________G______UG_GCC_______U	5'

UTR3

8mer

2138-2145

0.0323968611795959

Position on chromosome:

11:33377253-33377260

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGAAAUUGAUUUUAAAAAUUA________	3'
		_____________________CAGUAUUA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GUCAUAAU
(miRNA)	3'	____________________C________	5'

UTR3

8mer

2633-2658

0.0296244413033244

Position on chromosome:

11:33377748-33377773

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAC____A____U__AUAAUA________	3'
		___UUCA_CAUU_UC______CAGUAUUA
		___\|.\|\|_\|\|\|\|_.\|______\|\|\|\|\|\|\|\|
		___AGGU_GUAA_GG______GUCAUAAU
(miRNA)	3'	_______A____U__GCC___________	5'

UTR3

6mer

2971-2985

0.00433169166046847

Position on chromosome:

11:33378086-33378100

Conserved species:

rheMac2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	CGUGUUUAAUUAAA_____________________	3'
		______________UAU_GUUACU_____GUAUUA
		______________.\|\|_.\|\|\|\|._____\|\|\|\|\|\|
		______________GUA_UAAUGG_____CAUAAU
(miRNA)	3'	_____________G___G______GCCGU______	5'

UTR3

6mer

3273-3296

0.0102813568426432

Position on chromosome:

11:33378388-33378411

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	AAUG_______CGGUU_G__A_______U	3'
		____UCUAUUA_____U_CG_UAGUAUU_
		____\|\|.\|\|.\|_____._\|\|_.\|\|\|\|\|\|_
		____AGGUAGU_____G_GC_GUCAUAA_
(miRNA)	3'	___________AAU___G__C_______U	5'

UTR3

6mer

3387-3412

0.0137178194306974

Position on chromosome:

11:33378502-33378527

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GUG__AAA__AAGA___UA____________	3'
		___UC___AU____AUU___UGGU_GUAUUA
		___\|\|___\|\|____\|\|\|___.\|\|._\|\|\|\|\|\|
		___AG___UA____UAA___GCCG_CAUAAU
(miRNA)	3'	_____G____G______UGG____U______	5'

ENSG00000159082 (SYNJ1)

hsa-miR-200c-3p

0.999873521586466

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2165-2188

0.002125474777809

Position on chromosome:

21:34003234-34003257

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGAG___AG_GA___G___AUU______U	3'
		____CUA__A__AUU_GGC___AGUAUU_
		____\|.\|__\|__\|.._\|\|\|___\|\|\|\|\|\|_
		____GGU__U__UGG_CCG___UCAUAA_
(miRNA)	3'	___A___AG_AA___G____________U	5'

UTR3

6mer

1846-1871

0.00472449046528626

Position on chromosome:

21:34002915-34002940

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	UU____ACAA_____AUCUUUG______U	3'
		__GUUA____UUGGU_______AGUAUU_
		__.\|\|\|____..\|\|._______\|\|\|\|\|\|_
		__UAAU____GGCCG_______UCAUAA_
(miRNA)	3'	_G____G_____________________U	5'

UTR3

9mer

551-570

0.0620608763388338

Position on chromosome:

21:34001620-34001639

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CAGCAGUAG________AA_A_________	3'
		_________CGUC_UUA__C_GCAGUAUUA
		_________\|.\|\|_\|\|\|__\|_\|\|\|\|\|\|\|\|\|
		_________GUAG_AAU__G_CGUCAUAAU
(miRNA)	3'	________G____U___GG_C_________	5'

UTR3

6mer

247-268

0.00722305695755616

Position on chromosome:

21:34001316-34001337

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	CAAAUAA___GC________UAU_______	3'
		_______CUA__CAUUAUUC____GUAUUA
		_______\|.\|__\|\|\|\|\|..\|____\|\|\|\|\|\|
		_______GGU__GUAAUGGG____CAUAAU
(miRNA)	3'	______A___A_________CCGU______	5'

UTR3

8mer

81-108

0.0839641899900057

Position on chromosome:

21:34001150-34001177

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,galGal3

Binding area:

(Transcript)	5'	A____AAACU____AGAAGUA________	3'
		_CUAU_____UUAU_______CAGUAUUA
		_\|.\|\|_____\|\|\|._______\|\|\|\|\|\|\|\|
		_GGUA_____AAUG_______GUCAUAAU
(miRNA)	3'	A____GU_______GGCC___________	5'

UTR3

7mer

1197-1218

0.00523945775084956

Position on chromosome:

21:34029101-34029122

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUCAGGG____C__GA______UA________	3'
		_______UCCA_CA_____UGG__CAGUAUUG
		_______\|\|\|\|_\|\|_____.\|\|__\|\|\|\|\|\|\|.
		_______AGGU_GU_____GCC__GUCAUAAU
(miRNA)	3'	___________A__AAUGG_____________	5'

ENSG00000080546 (SESN1)

hsa-miR-200c-3p

0.999818041687333

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

877-897

0.0139807495935224

Position on chromosome:

6:109308517-109308537

Conserved species:

panTro2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUGAAGA__GGC____AUUCA_______U	3'
		_______CA___UGCC_____CAGUAUU_
		_______\|\|___\|.\|\|_____\|\|\|\|\|\|\|_
		_______GU___AUGG_____GUCAUAA_
(miRNA)	3'	______A__A______GCC_________U	5'

UTR3

6mer

91-117

0.00945594209883736

Position on chromosome:

6:109307731-109307757

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AA___AAA_A___UUGAAAAUAU______	3'
		__UGC___C_GGU__________GUAUUA
		__\|.\|___\|_\|\|.__________\|\|\|\|\|\|
		__AUG___G_CCG__________CAUAAU
(miRNA)	3'	_A___G_______U_______________	5'

UTR3

8mer

40-52

0.128015843736994

Position on chromosome:

6:109307680-109307692

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGAAUUGCUUUUGAAG____U________	3'
		________________UCUG_CAGUAUUA
		________________.\|.\|_\|\|\|\|\|\|\|\|
		________________GGGC_GUCAUAAU
(miRNA)	3'	_______________U____C________	5'

ENSG00000115963 (RND3)

hsa-miR-200c-3p

0.999796284470826

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

201-222

0.100945080218831

Position on chromosome:

2:151324910-151324931

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GAUGCAG______GCU__G__________	3'
		_______CAUUAU___UU_GGCAGUAUUA
		_______\|\|\|.\|\|___.._\|\|\|\|\|\|\|\|\|\|
		_______GUAGUA___GG_CCGUCAUAAU
(miRNA)	3'	______G______AU___G__________	5'

UTR3

8mer

57-79

0.0486611003086715

Position on chromosome:

2:151324766-151324788

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUUGU__G____A__UU____________U	3'
		_____UU_GUCA_UG__UCC_GCAGUAUU_
		_____\|._.\|\|\|_\|.__.\|\|_\|\|\|\|\|\|\|\|_
		_____AG_UAGU_AU__GGG_CGUCAUAA_
(miRNA)	3'	_______G____A_______C________U	5'

ENSG00000155130 (MARCKS)

hsa-miR-200c-3p

0.999716770513134

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

277-299

0.108981263799928

Position on chromosome:

6:114182033-114182055

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUAUUU______UU______CAU________	3'
		______UUUAUU____UUCG___CAGUAUUA
		______\|..\|\|.____..\|\|___\|\|\|\|\|\|\|\|
		______AGGUAG____GGGC___GUCAUAAU
(miRNA)	3'	____________UAAU____C__________	5'

UTR3

6mer

757-782

0.00649534374837663

Position on chromosome:

6:114182513-114182538

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGA______A__AA__U___AUUAU______	3'
		___CC_UUA_UA___G_GUA_____GUAUUA
		___\|\|_\|.\|_\|\|___\|_\|.\|_____\|\|\|\|\|\|
		___GG_AGU_AU___C_CGU_____CAUAAU
(miRNA)	3'	__A__U___A__GGG________________	5'

UTR3

6mer

1670-1691

0.00184470842134845

Position on chromosome:

6:114183426-114183447

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	AAUGUGU____AAA____A____________	3'
		_______UUCA___AUUG__UGGU_GUAUUA
		_______\|.\|\|___\|\|\|.__.\|\|._\|\|\|\|\|\|
		_______AGGU___UAAU__GCCG_CAUAAU
(miRNA)	3'	___________AG_____GG____U______	5'

UTR3

6mer

2683-2705

0.00678339266359716

Position on chromosome:

6:114184439-114184461

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAAAAU____AUA____UUUUUU______	3'
		______GUUA___UGGC______GUAUUA
		______.\|\|\|___.\|\|\|______\|\|\|\|\|\|
		______UAAU___GCCG______CAUAAU
(miRNA)	3'	_____G____GG_____U___________	5'

UTR3

7mer

2742-2762

0.0201143024477823

Position on chromosome:

6:114184498-114184518

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AUAAAUAA____UUG___AGUU________	3'
		________C_UC___UAC____CAGUAUUG
		________\|_\|\|___\|\|\|____\|\|\|\|\|\|\|.
		________G_AG___AUG____GUCAUAAU
(miRNA)	3'	_______G_U__UA____GGCC________	5'

ENSG00000108443 (RPS6KB1)

hsa-miR-200c-3p

0.999630885929556

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

194-201

0.00789800724813894

Position on chromosome:

17:58024344-58024351

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AAAAAAAAACUUAAAGCAAAA________	3'
		_____________________UAGUAUUG
		_____________________.\|\|\|\|\|\|.
		_____________________GUCAUAAU
(miRNA)	3'	____________________C________	5'

UTR3

8mer

280-297

0.0705563366254828

Position on chromosome:

17:58024430-58024447

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUGUUGAUGAC___AAA____A________	3'
		___________UCG____CUG_CAGUAUUA
		___________\|\|.____\|.\|_\|\|\|\|\|\|\|\|
		___________AGU____GGC_GUCAUAAU
(miRNA)	3'	__________U___AAUG___C________	5'

UTR3

7mer

900-926

0.00697998550980774

Position on chromosome:

17:58025050-58025076

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	A____CC_____UUCUUACAC_______U	3'
		_AUCG__ACCUG_________CAGUAUU_
		_\|\|\|.__\|\|\|.\|_________\|\|\|\|\|\|\|_
		_UAGU__UGGGC_________GUCAUAA_
(miRNA)	3'	G____AA_____C_______________U	5'

UTR3

7mer

2806-2830

0.0133808455921336

Position on chromosome:

17:58026956-58026980

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CCAG____G____ACAA__UAA_______	3'
		____CUGU_AUUA____UG___AGUAUUA
		____\|..\|_\|\|\|\|____.\|___\|\|\|\|\|\|\|
		____GGUA_UAAU____GC___UCAUAAU
(miRNA)	3'	___A____G____GG____CG________	5'

UTR3

7mer

3038-3056

0.0160960452846833

Position on chromosome:

17:58027188-58027206

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AUAAACAAGA_G____UUA_____A________	3'
		__________U_CAUC_______G_UAGUAUUA
		__________\|_\|\|\|\|_______\|_.\|\|\|\|\|\|\|
		__________A_GUAG_______C_GUCAUAAU
(miRNA)	3'	___________G____UAAUGGG_C________	5'

UTR3

6mer

3284-3299

0.00438764282943725

Position on chromosome:

17:58027434-58027449

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,monDom5

Binding area:

(Transcript)	5'	AAGCUGGACAAA______CAAA___________U	3'
		____________CUAUCA_________AGUAUU_
		____________\|.\|\|\|\|_________\|\|\|\|\|\|_
		____________GGUAGU_________UCAUAA_
(miRNA)	3'	___________A______AAUGGGCCG______U	5'

UTR3

7mer

3363-3381

0.0153075724900954

Position on chromosome:

17:58027513-58027531

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UGAUUCUUAA______A__ACA_________	3'
		__________CAUUAU_GC_____AGUAUUA
		__________\|\|\|.\|\|_.\|_____\|\|\|\|\|\|\|
		__________GUAGUA_UG_____UCAUAAU
(miRNA)	3'	_________G______A__GGCCG_______	5'

UTR3

6mer

3550-3577

0.00528250475518959

Position on chromosome:

17:58027700-58027727

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	U______UUGUAU___G___A_U______	3'
		_UUCAUC______UUA_UUG_C_GUAUUA
		_\|.\|\|\|\|______\|\|\|_..\|_\|_\|\|\|\|\|\|
		_AGGUAG______AAU_GGC_G_CAUAAU
(miRNA)	3'	_______U________G___C_U______	5'

ENSG00000070778 (PTPN21)

hsa-miR-200c-3p

0.999605049503315

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3345-3364

0.131946716220947

Position on chromosome:

14:88974353;88983436-88974364;88983443

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	CAGCAGGAG______A__UAU________	3'
		_________AUUACC_GG___CAGUAUUA
		_________\|\|\|\|\|\|_\|\|___\|\|\|\|\|\|\|\|
		_________UAAUGG_CC___GUCAUAAU
(miRNA)	3'	________G______G_____________	5'

UTR3

6mer

3308-3326

0.00225923195007131

Position on chromosome:

14:88974316-88974334

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GAAGAAAGA________GAA__A______C	3'
		_________UAUC_UUG___GG_AGUAUU_
		_________.\|\|\|_\|\|.___\|\|_\|\|\|\|\|\|_
		_________GUAG_AAU___CC_UCAUAA_
(miRNA)	3'	________G____U___GGG__G______U	5'

UTR3

6mer

3164-3188

0.00457682467249699

Position on chromosome:

14:88970813-88970837

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UGGG__G_____AAGA__AAAA_______	3'
		____AU_GUUAC____UG____AGUAUUG
		____\|\|_.\|\|\|\|____.\|____\|\|\|\|\|\|.
		____UA_UAAUG____GC____UCAUAAU
(miRNA)	3'	___G__G_____G_____CG_________	5'

ENSG00000198853 (RUSC2)

hsa-miR-200c-3p

0.999564721137312

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

130-152

0.111163613058646

Position on chromosome:

9:35561510-35561532

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CUGGCA__UGCUC______UGCU________	3'
		______CC_______CCUG____CAGUAUUA
		______\|\|_______\|\|.\|____\|\|\|\|\|\|\|\|
		______GG_______GGGC____GUCAUAAU
(miRNA)	3'	_____A__UAGUAAU____C___________	5'

UTR3

7mer

351-365

0.0291584478782972

Position on chromosome:

9:35561731-35561745

Conserved species:

panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GGUGGAGAUGAGGA___GUAA________	3'
		______________UGG____CAGUAUUG
		______________.\|\|____\|\|\|\|\|\|\|.
		______________GCC____GUCAUAAU
(miRNA)	3'	_____________G_______________	5'

UTR3

7mer

1315-1336

0.0076436494502546

Position on chromosome:

9:35547834-35547855

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCAGGCC___GC________UCUG_______	3'
		_______CCA__CA__GCCC____AGUAUUA
		_______\|\|\|__\|\|__.\|\|\|____\|\|\|\|\|\|\|
		_______GGU__GU__UGGG____UCAUAAU
(miRNA)	3'	______A___A___AA____CCG________	5'

ENSG00000134769 (DTNA)

hsa-miR-200c-3p

0.999326485468136

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

372-395

0.121791901835092

Position on chromosome:

18:32468071-32468094

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGCUG__________ACAA___________	3'
		_____CUGUUA_UAC____UGGCAGUAUUA
		_____\|..\|.\|_\|\|\|____.\|\|\|\|\|\|\|\|\|\|
		_____GGUAGU_AUG____GCCGUCAUAAU
(miRNA)	3'	____A______A___G______________	5'

UTR3

7mer

2208-2233

0.00435871965351876

Position on chromosome:

18:32469907-32469932

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGG___CUGG_____CAUACU________	3'
		___CCA____UGCCU______CAGUAUUG
		___\|\|\|____\|.\|\|.______\|\|\|\|\|\|\|.
		___GGU____AUGGG______GUCAUAAU
(miRNA)	3'	__A___AGUA_____CC____________	5'

UTR3

6mer

3513-3528

0.0104227384371328

Position on chromosome:

18:32471212-32471227

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUGGAUUUUUGUA_UG___UUA_______	3'
		_____________U__CUG___AGUAUUG
		_____________\|__\|.\|___\|\|\|\|\|\|.
		_____________A__GGC___UCAUAAU
(miRNA)	3'	____________A_UG___CG________	5'

UTR3

7mer

368-388

0.0167461481280358

Position on chromosome:

18:32386189-32386209

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CGGAAGG____G__A_AA_UU_______U	3'
		_______CCAU_GU_A__U__CAGUAUU_
		_______\|\|\|\|_.\|_\|__.__\|\|\|\|\|\|\|_
		_______GGUA_UA_U__G__GUCAUAA_
(miRNA)	3'	______A____G__A_GG_CC_______U	5'

ENSG00000078018 (MAP2)

hsa-miR-200c-3p

0.999317948849878

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

249-269

0.0172235951984467

Position on chromosome:

2:210595371-210595391

Conserved species:

panTro2,rn4,mm9,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGCUCUGC___________A___________	3'
		________UCUGUU_UUGC_UGG_AGUAUUA
		________\|\|..\|._\|\|.\|_.\|\|_\|\|\|\|\|\|\|
		________AGGUAG_AAUG_GCC_UCAUAAU
(miRNA)	3'	______________U____G___G_______	5'

UTR3

8mer

745-767

0.0949930593235068

Position on chromosome:

2:210595867-210595889

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CCCCUU__________UU__AUA________	3'
		______UCCAUC__UG__UG___CAGUAUUA
		______\|\|\|\|\|\|__\|.__.\|___\|\|\|\|\|\|\|\|
		______AGGUAG__AU__GC___GUCAUAAU
(miRNA)	3'	____________UA__GG__C__________	5'

UTR3

7mer

1489-1507

0.00412184442792806

Position on chromosome:

2:210596611-210596629

Conserved species:

panTro2,rheMac2,galGal3

Binding area:

(Transcript)	5'	GUAAAGUAAC__A___U_AUC________	3'
		__________AC_CUG_G___UAGUAUUA
		__________\|\|_\|.\|_\|___.\|\|\|\|\|\|\|
		__________UG_GGC_C___GUCAUAAU
(miRNA)	3'	_________A___________________	5'

UTR3

6mer

2258-2275

0.00207696922214428

Position on chromosome:

2:210597380-210597397

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	AAAAGUUUUA_____U_AAAUA______U	3'
		__________ACCUG_G_____AGUAUU_
		__________\|\|\|.\|_\|_____\|\|\|\|\|\|_
		__________UGGGC_C_____UCAUAA_
(miRNA)	3'	_________A_______G__________U	5'

UTR3

7mer

3128-3153

0.0114331871605781

Position on chromosome:

2:210598250-210598275

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AG___A___AUAACAU___AU_______U	3'
		__CCA_UAU_______UCC__CAGUAUU_
		__\|\|\|_.\|\|_______.\|\|__\|\|\|\|\|\|\|_
		__GGU_GUA_______GGG__GUCAUAA_
(miRNA)	3'	_A___A___AU________CC_______U	5'

ENSG00000108960 (MMD)

hsa-miR-200c-3p

0.999246456981494

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1689-1716

0.117475146947525

Position on chromosome:

17:53471663-53471690

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	A_____ACUA___C___AAAC________	3'
		_UCUGU____AUU_UCC____CAGUAUUA
		_\|\|..\|____\|\|\|_.\|\|____\|\|\|\|\|\|\|\|
		_AGGUA____UAA_GGG____GUCAUAAU
(miRNA)	3'	______G______U___CC__________	5'

UTR3

6mer

966-984

0.00444674177558269

Position on chromosome:

17:53470940-53470958

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	CUUGGUUUA___G_____A____AAA______U	3'
		_________CCA____UG__UGG___AGUAUU_
		_________\|\|\|____\|.__.\|\|___\|\|\|\|\|\|_
		_________GGU____AU__GCC___UCAUAA_
(miRNA)	3'	________A___AGUA__GG___G________U	5'

UTR3

6mer

862-889

0.00228667905586776

Position on chromosome:

17:53470836-53470863

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	C__AG___AUAAAUGUUUUUUCU______	3'
		_AC__UGG_______________GUAUUA
		_\|\|__.\|\|_______________\|\|\|\|\|\|
		_UG__GCC_______________CAUAAU
(miRNA)	3'	A__G____GU___________________	5'

UTR3

7mer

851-866

0.00390423787861066

Position on chromosome:

17:53470825-53470840

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUGUUUUUUCUG_________A________	3'
		_____________UAUUA__UG_CAGUAUUG
		_____________.\|\|\|\|__.\|_\|\|\|\|\|\|\|.
		_____________GUAAU__GC_GUCAUAAU
(miRNA)	3'	____________A_____GG__C________	5'

UTR3

6mer

805-825

0.00160120651380926

Position on chromosome:

17:53470779-53470799

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGGAAACU____AAGA___UUAU______	3'
		________CCUG____GCA____GUAUUA
		________\|\|.\|____\|\|\|____\|\|\|\|\|\|
		________GGGC____CGU____CAUAAU
(miRNA)	3'	_______U_____________________	5'

UTR3

6mer

539-564

0.00467314762539002

Position on chromosome:

17:53470513-53470538

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGG_____G_______AGUGAUAUUUAU______	3'
		___C_UCA_____UGG____________GUAUUA
		___\|_\|\|\|_____.\|\|____________\|\|\|\|\|\|
		___G_AGU_____GCC____________CAUAAU
(miRNA)	3'	__G_U___AAUGG___GU________________	5'

UTR3

7mer

481-500

0.016339307947591

Position on chromosome:

17:53488651-53488670

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUGCCCUC_____________UA_______U	3'
		________UUCAUCGUU__UC__CAGUAUU_
		________\|.\|\|\|\|.\|\|__.\|__\|\|\|\|\|\|\|_
		________AGGUAGUAA__GG__GUCAUAA_
(miRNA)	3'	_________________UG__CC_______U	5'

ENSG00000164830 (OXR1)

hsa-miR-200c-3p

0.999198733148233

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1619-1643

0.127213868594427

Position on chromosome:

8:107764789-107764813

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUCC__U___GUCUU__A_A_________	3'
		____CC_UCG_____CC_C_GCAGUAUUA
		____\|\|_\|\|._____\|\|_\|_\|\|\|\|\|\|\|\|\|
		____GG_AGU_____GG_G_CGUCAUAAU
(miRNA)	3'	___A__U___AAU______C_________	5'

ENSG00000169946 (ZFPM2)

hsa-miR-200c-3p

0.999142740385136

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

153-172

0.00886587211475007

Position on chromosome:

8:106815920-106815939

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UCAUUACAG_______G__AA___________	3'
		_________UCCAUUA_UA____GU_GUAUUA
		_________\|\|\|\|\|.\|_\|\|____\|._\|\|\|\|\|\|
		_________AGGUAGU_AU____CG_CAUAAU
(miRNA)	3'	________________A__GGGC__U______	5'

UTR3

8mer

198-217

0.0537130852393409

Position on chromosome:

8:106815965-106815984

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAUUAA____________A_________C	3'
		________UUUAUU_UUACC__GCAGUAUU_
		________\|..\|\|._\|\|\|\|\|__\|\|\|\|\|\|\|\|_
		________AGGUAG_AAUGG__CGUCAUAA_
(miRNA)	3'	______________U_____GC________U	5'

UTR3

8mer

735-757

0.0496538848009063

Position on chromosome:

8:106816502-106816524

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AAUGAA__AA______G_AA_________	3'
		______CA__AUUACU_G__GCAGUAUUG
		______\|\|__\|\|\|\|\|._\|__\|\|\|\|\|\|\|\|.
		______GU__UAAUGG_C__CGUCAUAAU
(miRNA)	3'	_____G__AG______G____________	5'

UTR3

7mer

750-777

0.0202597278197732

Position on chromosome:

8:106816517-106816544

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	G__G______AAGUAAUGA__________	3'
		_CA_UAUUGU_________GGUAGUAUUA
		_\|\|_.\|\|\|.._________\|\|.\|\|\|\|\|\|\|
		_GU_GUAAUG_________CCGUCAUAAU
(miRNA)	3'	G__A______GG_________________	5'

UTR3

8mer

2101-2125

0.017375463776745

Position on chromosome:

8:106814412-106814436

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAAA___A___GGU__ACAAA________	3'
		____CAU_CAU___CC_____CAGUAUUA
		____\|\|\|_\|\|\|___\|\|_____\|\|\|\|\|\|\|\|
		____GUA_GUA___GG_____GUCAUAAU
(miRNA)	3'	___G_______AU___GCC__________	5'

ENSG00000134243 (SORT1)

hsa-miR-200c-3p

0.999126810270327

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2175-2202

0.00729117283182356

Position on chromosome:

1:109854367-109854394

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	____GUGG____UGUUU___A________U	3'
		_UCA____CAUU_____CCU_GCAGUAUU_
		_.\|\|____\|\|\|\|_____\|\|._\|\|\|\|\|\|\|\|_
		_GGU____GUAA_____GGG_CGUCAUAA_
(miRNA)	3'	A___A_______U_______C________U	5'

UTR3

9mer

278-301

0.118516612574204

Position on chromosome:

1:109852470-109852493

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCUUC______AAAG___AAA_________	3'
		_____CCA_CG____UGU___GCAGUAUUA
		_____\|\|\|_\|.____\|..___\|\|\|\|\|\|\|\|\|
		_____GGU_GU____AUG___CGUCAUAAU
(miRNA)	3'	____A___A__A______GGC_________	5'

ENSG00000171940 (ZNF217)

hsa-miR-200c-3p

0.999120699138287

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1663-1682

0.0048285967122197

Position on chromosome:

20:52185267-52185286

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUUUUUAAA______A__AUUUU________	3'
		_________CUGUCA_UG_______GUAUUA
		_________\|..\|\|\|_\|._______\|\|\|\|\|\|
		_________GGUAGU_AU_______CAUAAU
(miRNA)	3'	________A______A__GGGCCGU______	5'

UTR3

6mer

1610-1635

0.00246591967309607

Position on chromosome:

20:52185214-52185239

Conserved species:

panTro2,rheMac2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UUG___UAAA______AA___A_______	3'
		___UCU____AUUGUU__UGG_AGUAUUG
		___\|\|.____\|\|\|...__.\|\|_\|\|\|\|\|\|.
		___AGG____UAAUGG__GCC_UCAUAAU
(miRNA)	3'	______UAG____________G_______	5'

UTR3

6mer

367-395

0.00484920681280173

Position on chromosome:

20:52183971-52183999

Conserved species:

panTro2,dasNov2

Binding area:

(Transcript)	5'	______UGAAAACA_G___AUUU______	3'
		UCUAUU________A_UCG____GUAUUA
		\|\|.\|\|.________\|_.\|\|____\|\|\|\|\|\|
		AGGUAG________U_GGC____CAUAAU
(miRNA)	3'	______UAA______G___CGU_______	5'

UTR3

8mer

244-258

0.113549975390467

Position on chromosome:

20:52183848-52183862

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAUAUGUUUUUG_____AU________	3'
		______________UGUCC__CAGUAUUA
		______________\|..\|\|__\|\|\|\|\|\|\|\|
		______________AUGGG__GUCAUAAU
(miRNA)	3'	_____________A_____CC________	5'

ENSG00000122707 (RECK)

hsa-miR-200c-3p

0.999076563416725

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

110-131

0.0165484866739248

Position on chromosome:

9:36123153-36123174

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUGUCA__UC____C___ACA_______U	3'
		______CC__UAUU_GCC___CAGUAUU_
		______\|\|__.\|\|\|_.\|\|___\|\|\|\|\|\|\|_
		______GG__GUAA_UGG___GUCAUAA_
(miRNA)	3'	_____A__UA________GCC_______U	5'

UTR3

6mer

363-390

0.00431335459626103

Position on chromosome:

9:36123406-36123433

Conserved species:

panTro2

Binding area:

(Transcript)	5'	____UU___GAGUUCUU____A_______U	3'
		UUCA__UCA________UUUG__AGUAUU_
		\|.\|\|__\|\|\|________...\|__\|\|\|\|\|\|_
		AGGU__AGU________GGGC__UCAUAA_
(miRNA)	3'	_________AAU_________CG______U	5'

UTR3

7mer

1064-1079

0.0241064599852361

Position on chromosome:

9:36124107-36124122

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUAUUUAAAAGU_______G____________	3'
		_____________GUCA__A_CUG__AGUAUUA
		_____________.\|\|\|__\|_\|.\|__\|\|\|\|\|\|\|
		_____________UAGU__U_GGC__UCAUAAU
(miRNA)	3'	____________G____AA_G___CG_______	5'

UTR3

6mer

1185-1201

0.00668796087729258

Position on chromosome:

9:36124228-36124244

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	CAUGAACUUAG________A__A_______U	3'
		___________AUU_UUAC_UG__AGUAUU_
		___________\|\|._\|\|\|\|_.\|__\|\|\|\|\|\|_
		___________UAG_AAUG_GC__UCAUAA_
(miRNA)	3'	__________G___U____G__CG______U	5'

UTR3

8mer

1191-1213

0.069598385146028

Position on chromosome:

9:36124234-36124256

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUUUUA___G_AG_____UUU________	3'
		______CAU_A__UAUUU___CAGUAUUA
		______\|\|\|_\|__\|\|...___\|\|\|\|\|\|\|\|
		______GUA_U__AUGGG___GUCAUAAU
(miRNA)	3'	_____G___G_A______CC_________	5'

UTR3

6mer

1232-1250

0.00527980508385172

Position on chromosome:

9:36124275-36124293

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUCUGAAAUA___AGGG__AU__________	3'
		__________CAU____AU___GC_GUAUUA
		__________\|\|\|____\|.___\|\|_\|\|\|\|\|\|
		__________GUA____UG___CG_CAUAAU
(miRNA)	3'	_________G___GUAA__GGC__U______	5'

UTR3

7mer

1265-1290

0.00489463110869448

Position on chromosome:

9:36100508-36100533

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUG____AGUAAAU_____GGA_______	3'
		___UCAU_______CUCGG___AGUAUUA
		___.\|\|\|_______\|.\|\|\|___\|\|\|\|\|\|\|
		___GGUA_______GGGCC___UCAUAAU
(miRNA)	3'	__A____GUAAU_______G_________	5'

ENSG00000128052 (KDR)

hsa-miR-200c-3p

0.998885894511382

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

427-445

0.0169970793632467

Position on chromosome:

4:55945071-55945089

Conserved species:

panTro2,mm9,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CACUCUCAC__CG________AU_______U	3'
		_________CC__CA__ACCC__CAGUAUU_
		_________\|\|__\|\|__\|\|\|\|__\|\|\|\|\|\|\|_
		_________GG__GU__UGGG__GUCAUAA_
(miRNA)	3'	________A__UA__AA____CC_______U	5'

UTR3

6mer

312-336

0.00622368386039044

Position on chromosome:

4:55944956-55944980

Conserved species:

panTro2,oryCun2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAGC___AA____A__AUCUAUU______	3'
		____CCA__UUAU_AC_______GUAUUA
		____\|\|\|__\|.\|\|_\|\|_______\|\|\|\|\|\|
		____GGU__AGUA_UG_______CAUAAU
(miRNA)	3'	___A_________A__GGCCGU_______	5'

UTR3

8mer

76-97

0.0986008079438402

Position on chromosome:

4:55944720-55944741

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGUACUA______________UAU________	3'
		_______UUCA_CAUU__UUG___CAGUAUUA
		_______\|.\|\|_\|\|\|\|__..\|___\|\|\|\|\|\|\|\|
		_______AGGU_GUAA__GGC___GUCAUAAU
(miRNA)	3'	___________A____UG___C__________	5'

ENSG00000122548 (KIAA0087)

hsa-miR-200c-3p

0.998821229071338

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3400-3424

0.00565431022866964

Position on chromosome:

7:26576140-26576164

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUA______GA____AAA___G______C	3'
		___UUUAUU__AUUG___UGG_AGUAUU_
		___\|..\|\|.__\|\|\|.___.\|\|_\|\|\|\|\|\|_
		___AGGUAG__UAAU___GCC_UCAUAA_
(miRNA)	3'	_______________GG____G______U	5'

UTR3

6mer

551-562

0.00485945683626081

Position on chromosome:

7:26573291-26573302

Conserved species:

panTro2,rheMac2,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUGUUUUGUUUUAAAUG_______________	3'
		_________________UGUCUG___GUAUUA
		_________________\|..\|.\|___\|\|\|\|\|\|
		_________________AUGGGC___CAUAAU
(miRNA)	3'	________________A______CGU______	5'

UTR3

8mer

47-68

0.110384612513932

Position on chromosome:

7:26572787-26572808

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UAAAUAC___GG_____U____U________	3'
		_______CCA____UGC_UCGG_CAGUAUUA
		_______\|\|\|____\|.\|_.\|\|\|_\|\|\|\|\|\|\|\|
		_______GGU____AUG_GGCC_GUCAUAAU
(miRNA)	3'	______A___AGUA_________________	5'

ENSG00000148429 (USP6NL)

hsa-miR-200c-3p

0.99879312912848

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

8413-8435

0.082805084670295

Position on chromosome:

10:11504358-11504380

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUAUG_____A______AAA________U	3'
		_____UUCAU_AUUGCC___GCAGUAUU_
		_____\|.\|\|\|_\|\|\|.\|\|___\|\|\|\|\|\|\|\|_
		_____AGGUA_UAAUGG___CGUCAUAA_
(miRNA)	3'	__________G______GC_________U	5'

UTR3

6mer

6951-6971

0.00278917640696588

Position on chromosome:

10:11502896-11502916

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUAAAUAG__AA__AA_U___GU______	3'
		________CA__AC__G_GCA__GUAUUA
		________\|\|__\|\|__\|_\|\|\|__\|\|\|\|\|\|
		________GU__UG__C_CGU__CAUAAU
(miRNA)	3'	_______A__AA__GG_____________	5'

UTR3

6mer

6460-6472

0.00187318381232568

Position on chromosome:

10:11502405-11502417

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	UCUAAUGGAGUAGCU________________C	3'
		_______________GUUGCCU___AGUAUU_
		_______________.\|\|.\|\|.___\|\|\|\|\|\|_
		_______________UAAUGGG___UCAUAA_
(miRNA)	3'	______________G_______CCG______U	5'

UTR3

6mer

5804-5810

0.00182152767469985

Position on chromosome:

10:11501749-11501755

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	UGAAGUAGUAAUUUAUAAAUU_______U	3'
		_____________________UAGUAUU_
		_____________________.\|\|\|\|\|\|_
		_____________________GUCAUAA_
(miRNA)	3'	____________________C_______U	5'

UTR3

6mer

5022-5039

0.00203264762486243

Position on chromosome:

10:11500967-11500984

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUAAAUGUCUG____UA___G___________	3'
		___________UAUC___AU_UGG__GUAUUA
		___________.\|\|\|___\|._.\|\|__\|\|\|\|\|\|
		___________GUAG___UG_GCC__CAUAAU
(miRNA)	3'	__________G____UAA__G___GU______	5'

UTR3

6mer

3256-3276

0.00229335497787741

Position on chromosome:

10:11499201-11499221

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GCACUCUG___GA____UUA____________	3'
		________CUA__CGUU___CUG___GUAUUA
		________\|.\|__\|.\|\|___\|.\|___\|\|\|\|\|\|
		________GGU__GUAA___GGC___CAUAAU
(miRNA)	3'	_______A___A_____UG____CGU______	5'

UTR3

6mer

2163-2175

0.00142875488403899

Position on chromosome:

10:11498108-11498120

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUUUAAUUUUAAUGAA____AAU_______	3'
		________________GCCU____GUAUUA
		________________.\|\|.____\|\|\|\|\|\|
		________________UGGG____CAUAAU
(miRNA)	3'	_______________A____CCGU______	5'

UTR3

7mer

1693-1709

0.00324057688980022

Position on chromosome:

10:11497638-11497654

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAGGAAGAACUG_________A____________	3'
		____________CCAUC_UUA_____CAGUAUUG
		____________\|\|\|\|\|_\|\|\|_____\|\|\|\|\|\|\|.
		____________GGUAG_AAU_____GUCAUAAU
(miRNA)	3'	___________A_____U___GGGCC________	5'

UTR3

7mer

90-106

0.022228571533731

Position on chromosome:

10:11496035-11496051

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2

Binding area:

(Transcript)	5'	UUUGUUGCUUUA_________UA_______	3'
		____________CGU_AUUUG__AGUAUUA
		____________\|.\|_\|...\|__\|\|\|\|\|\|\|
		____________GUA_UGGGC__UCAUAAU
(miRNA)	3'	___________A___A_____CG_______	5'

ENSG00000132970 (WASF3)

hsa-miR-200c-3p

0.998734195953131

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

132-159

0.0253572143820067

Position on chromosome:

13:27260115-27260142

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	____AAAAU______GUCUUUU_______U	3'
		UCCA______UCUGG_______CAGUAUU_
		\|\|\|\|______.\|.\|\|_______\|\|\|\|\|\|\|_
		AGGU______GGGCC_______GUCAUAA_
(miRNA)	3'	____AGUAAU___________________U	5'

UTR3

6mer

259-280

0.00534590263163026

Position on chromosome:

13:27260242-27260263

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	CUGCUU______UUG___AU_AG______U	3'
		______UCC_UC___GCC__G__AGUAUU_
		______\|\|\|_\|\|___.\|\|__\|__\|\|\|\|\|\|_
		______AGG_AG___UGG__C__UCAUAA_
(miRNA)	3'	_________U__UAA___GC_G_______U	5'

UTR3

7mer

1414-1429

0.00449545873600465

Position on chromosome:

13:27261397-27261412

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAAGGACUUUAA____________AA_______U	3'
		____________CC_____UACUC__CAGUAUU_
		____________\|\|_____\|\|\|.\|__\|\|\|\|\|\|\|_
		____________GG_____AUGGG__GUCAUAA_
(miRNA)	3'	___________A__UAGUA_____CC_______U	5'

UTR3

6mer

1963-1985

0.00202701501089345

Position on chromosome:

13:27261946-27261968

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UACUUG__UU__UUG_UG__UUU_______	3'
		______UC__UC___U__CU____GUAUUA
		______\|\|__\|\|___\|__\|.____\|\|\|\|\|\|
		______AG__AG___A__GG____CAUAAU
(miRNA)	3'	________GU__UA__UG__CCGU______	5'

UTR3

6mer

2289-2315

0.00579543524011905

Position on chromosome:

13:27262272-27262298

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	A____AUUUAG_______UUAG______U	3'
		_UCCA______AUUAUUU____AGUAUU_
		_\|\|\|\|______\|\|\|\|...____\|\|\|\|\|\|_
		_AGGU______UAAUGGG____UCAUAA_
(miRNA)	3'	_____AG___________CCG_______U	5'

UTR3

6mer

2350-2375

0.00238949693695917

Position on chromosome:

13:27262333-27262358

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAA____GA__UUUU__AAUAU_______	3'
		___UCCA__UC____CU_____GGUAUUA
		___\|\|\|\|__\|\|____\|._____.\|\|\|\|\|\|
		___AGGU__AG____GG_____UCAUAAU
(miRNA)	3'	___________UAAU__GCCG________	5'

UTR3

6mer

2528-2543

0.00303918854139223

Position on chromosome:

13:27262511-27262526

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAGGUAAUUUUAA_______CU________	3'
		_____________AUUGUCC__C_GUAUUA
		_____________\|\|\|..\|\|__\|_\|\|\|\|\|\|
		_____________UAAUGGG__G_CAUAAU
(miRNA)	3'	____________G_______CC_U______	5'

UTR3

9mer

2926-2953

0.0645005627584752

Position on chromosome:

13:27262909-27262936

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	A____AG_______UCAUCUU_________	3'
		_UCAU___UAUCUG_______GCAGUAUUA
		_.\|\|\|___\|\|.\|.\|_______\|\|\|\|\|\|\|\|\|
		_GGUA___AUGGGC_______CGUCAUAAU
(miRNA)	3'	A____GUA______________________	5'

UTR3

6mer

2981-2989

0.0101337453380979

Position on chromosome:

13:27262964-27262972

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGUUGUAAAUUGAAUUUAAA_________	3'
		____________________GUGGUAUUA
		____________________\|..\|\|\|\|\|\|
		____________________CGUCAUAAU
(miRNA)	3'	___________________C_________	5'

UTR3

7mer

990-1012

0.0105734287935891

Position on chromosome:

13:27256751-27256773

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUGCUC___GCG__GAUAA____________	3'
		______CCA___CA_____UUG__AGUAUUA
		______\|\|\|___\|\|_____..\|__\|\|\|\|\|\|\|
		______GGU___GU_____GGC__UCAUAAU
(miRNA)	3'	_____A___A____AAUG____CG_______	5'

ENSG00000117600 (LPPR4)

hsa-miR-200c-3p

0.998690148366187

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

380-407

0.108351284216981

Position on chromosome:

1:99772947-99772974

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	U___CUACAG__GAG___AU_________	3'
		_UCC______CA___GCC__GCAGUAUUA
		_\|\|\|______\|\|___.\|\|__\|\|\|\|\|\|\|\|\|
		_AGG______GU___UGG__CGUCAUAAU
(miRNA)	3'	____UA______AA____GC_________	5'

UTR3

7mer

1467-1494

0.0108216186675149

Position on chromosome:

1:99774034-99774061

Conserved species:

panTro2,rheMac2,dasNov2

Binding area:

(Transcript)	5'	A__UAC___GUU_____AACU________	3'
		_CA___UCA___CUUGG____UAGUAUUA
		_\|\|___\|\|\|___\|..\|\|____.\|\|\|\|\|\|\|
		_GU___AGU___GGGCC____GUCAUAAU
(miRNA)	3'	G________AAU_________________	5'

ENSG00000196428 (TSC22D2)

hsa-miR-200c-3p

0.998617790756339

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

106-127

0.0895118920426452

Position on chromosome:

3:150176530-150176551

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGGUUGU__GU___G__UUUU________	3'
		_______GU__UUG_CC____CAGUAUUA
		_______.\|__\|\|._\|\|____\|\|\|\|\|\|\|\|
		_______UA__AAU_GG____GUCAUAAU
(miRNA)	3'	______G__GU___G__CC__________	5'

UTR3

6mer

1320-1339

0.00496733407444959

Position on chromosome:

3:150177744-150177763

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGAUUAAG_G__GUG___A_____________U	3'
		________U_CA___UAU___CUG__AGUAUU_
		________\|_\|\|___.\|\|___\|.\|__\|\|\|\|\|\|_
		________A_GU___GUA___GGC__UCAUAA_
(miRNA)	3'	_________G__A_____AUG___CG______U	5'

UTR3

6mer

3063-3087

0.00215158396666387

Position on chromosome:

3:150179487-150179511

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AUAA____CUA____AAUUAGA_______	3'
		____UAUC___UGCU_______AGUAUUG
		____.\|\|\|___\|.\|._______\|\|\|\|\|\|.
		____GUAG___AUGG_______UCAUAAU
(miRNA)	3'	___G____UA_____GCCG__________	5'

UTR3

6mer

3668-3683

0.00105095632259407

Position on chromosome:

3:150180092-150180107

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GCAGUGACUUCC_____UG______________U	3'
		____________CCA_C___ACCU___AGUAUU_
		____________\|\|\|_\|___\|\|\|.___\|\|\|\|\|\|_
		____________GGU_G___UGGG___UCAUAA_
(miRNA)	3'	___________A___A_UAA____CCG______U	5'

UTR3

6mer

5317-5337

0.00135236810434739

Position on chromosome:

3:150181741-150181761

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUGUCUA_______GG____A________U	3'
		_______CUGUCAU__GUCC__UAGUAUU_
		_______\|..\|\|\|\|__..\|\|__.\|\|\|\|\|\|_
		_______GGUAGUA__UGGG__GUCAUAA_
(miRNA)	3'	______A_______A_____CC_______U	5'

UTR3

6mer

6134-6153

0.00111722758709093

Position on chromosome:

3:150182558-150182577

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CACCUCGA_____A_____AUGA______C	3'
		________CAUCG__GCCU____AGUAUU_
		________\|\|\|\|.__.\|\|.____\|\|\|\|\|\|_
		________GUAGU__UGGG____UCAUAA_
(miRNA)	3'	_______G_____AA____CCG_______U	5'

UTR3

6mer

7261-7286

0.0036152864565476

Position on chromosome:

3:150183685-150183710

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAA___AG____AUAGAG___UU_______	3'
		___CAU___UAC______GGU__GGUAUUA
		___\|\|\|___\|\|\|______\|\|.__.\|\|\|\|\|\|
		___GUA___AUG______CCG__UCAUAAU
(miRNA)	3'	__G___GUA___GG________________	5'

UTR3

7mer

7397-7421

0.00885648179420678

Position on chromosome:

3:150183821-150183845

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGGA____GG____ACA__AUGA_______	3'
		____CUAU___UAC___UG____AGUAUUA
		____\|.\|\|___\|\|\|___.\|____\|\|\|\|\|\|\|
		____GGUA___AUG___GC____UCAUAAU
(miRNA)	3'	___A____GUA___G____CG_________	5'

UTR3

6mer

7619-7633

0.00566978646647096

Position on chromosome:

3:150184043-150184057

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	UACUUCUACAAGUA_________U________	3'
		______________CA_UAUUUG___GUAUUA
		______________\|\|_\|\|...\|___\|\|\|\|\|\|
		______________GU_AUGGGC___CAUAAU
(miRNA)	3'	_____________A__A______CGU______	5'

ENSG00000115935 (WIPF1)

hsa-miR-200c-3p

0.998511816022752

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

482-502

0.0294041409434701

Position on chromosome:

2:175424782-175424802

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAAUGUA____A___GUAAUA________U	3'
		_______UUCA_CAU_______CAGUAUU_
		_______\|.\|\|_\|\|\|_______\|\|\|\|\|\|\|_
		_______AGGU_GUA_______GUCAUAA_
(miRNA)	3'	___________A___AUGGGCC_______U	5'

UTR3

6mer

445-471

0.00474093935806983

Position on chromosome:

2:175424745-175424771

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	CA__UC_____UUAUA___AAAU______	3'
		__CC__UUAUU_____UUG____GUAUUA
		__\|\|__\|.\|\|\|_____..\|____\|\|\|\|\|\|
		__GG__AGUAA_____GGC____CAUAAU
(miRNA)	3'	_A__U______UG______CGU_______	5'

UTR3

8mer

437-459

0.0691414469358922

Position on chromosome:

2:175424737-175424759

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AUUUUA_____AAA__UAUUA________	3'
		______UAUUG___UG_____CAGUAUUA
		______.\|\|\|.___.\|_____\|\|\|\|\|\|\|\|
		______GUAAU___GC_____GUCAUAAU
(miRNA)	3'	_____A_____GG___C____________	5'

UTR3

7mer

418-441

0.0137972710894673

Position on chromosome:

2:175424718-175424741

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	ACAG_____AA____A_UGUU_______U	3'
		____UAUUA__ACUC_G____CAGUAUU_
		____.\|\|.\|__\|\|.\|_\|____\|\|\|\|\|\|\|_
		____GUAGU__UGGG_C____GUCAUAA_
(miRNA)	3'	___G_____AA______C__________U	5'