|
| | | Ensembl Gene Id | miRNA name | miTG score | Also Predicted | | | | | | | | 1 | ENSG00000169554 (ZEB2) | hsa-miR-200b-3p | 0.999997138573347 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 4972-4994 | 0.0332713152613713 | 11 | | | | | | | | | | Position on chromosome: | 2:145146620-145146642 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,fr2 | Binding area: | (Transcript) | 5' | GGUGC_CG__C_____UACAU_______U | 3' | | | _____C__CA_UACCA_____CAGUAUU_ | | | | _____|__||_|||||_____|||||||_ | | | | _____G__GU_AUGGU_____GUCAUAA_ | | (miRNA) | 3' | ____A_UA__A_____CC__________U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 4908-4923 | 0.0392228852278559 | 8 | | | | | | | | | | Position on chromosome: | 2:145146556-145146571 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGUGCUCGCACUA__A___AU__________ | 3' | | | _____________CA_UGC____CAGUAUUA | | | | _____________||_|.|____|||||||| | | | | _____________GU_AUG____GUCAUAAU | | (miRNA) | 3' | ____________A__A___GUCC________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 4550-4566 | 0.0742510577965615 | 15 | | | | | | | | | | Position on chromosome: | 2:145146198-145146214 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | UGUUCUUUGAAG__C_____U_U________ | 3' | | | ____________CA___CCA_G_CAGUAUUA | | | | ____________||___|||_|_|||||||| | | | | ____________GU___GGU_C_GUCAUAAU | | (miRNA) | 3' | ___________A__AAU_____C________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 4465-4485 | 0.0596415744374481 | 15 | | | | | | | | | | Position on chromosome: | 2:145146113-145146133 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | UUUUUUGU______AUUUU_U________ | 3' | | | ________UCAUUA_____G_CAGUAUUA | | | | ________||||||_____|_|||||||| | | | | ________AGUAAU_____C_GUCAUAAU | | (miRNA) | 3' | _______U______GGU___C________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 4334-4356 | 0.0385051276625195 | 13 | | | | | | | | | | Position on chromosome: | 2:145145982-145146004 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | UUUAUU____ACUG__G__UA________ | 3' | | | ______UCAU____UA_UG__CAGUAUUA | | | | ______||||____||_..__|||||||| | | | | ______AGUA____AU_GU__GUCAUAAU | | (miRNA) | 3' | __________GUA___G__CC________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 4001-4018 | 0.014390072742954 | 14 | | | | | | | | | | Position on chromosome: | 2:145145649-145145666 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | UUUCCUGAAUU______UG__AA________ | 3' | | | ___________GUC_UU__UA___AGUAUUA | | | | ___________.||_||__.|___||||||| | | | | ___________UAG_AA__GU___UCAUAAU | | (miRNA) | 3' | __________G___U__UG__CCG_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3639-3651 | 0.00382762430673846 | 10 | | | | | | | | | | Position on chromosome: | 2:145145287-145145299 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | ACAUUUCUACUUUUG______G__________U | 3' | | | _______________CAUUAC_____AGUAUU_ | | | | _______________||||||_____||||||_ | | | | _______________GUAAUG_____UCAUAA_ | | (miRNA) | 3' | ______________A______GUCCG______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1778-1794 | 0.00168399799705198 | 1 | | | | | | | | | | Position on chromosome: | 2:145143426-145143442 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UAUUUGAAUAAA___GAAUAAAU_______ | 3' | | | ____________UAU_________GUAUUA | | | | ____________.||_________|||||| | | | | ____________GUA_________CAUAAU | | (miRNA) | 3' | ___________A___AUGGUCCGU______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 2069-2094 | 0.018751954229128 | 0 | | | | | | | | | | Position on chromosome: | 2:145157178-145157203 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GAG____AAUGG_____CUAAA_______ | 3' | | | ___UCAU_____UGCCA_____AGUAUUA | | | | ___||||_____|.|||_____||||||| | | | | ___AGUA_____AUGGU_____UCAUAAU | | (miRNA) | 3' | _______GUA_______CCG_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1154-1167 | 0.018577656766127 | 0 | | | | | | | | | | Position on chromosome: | 2:145156263-145156276 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAAACAAAUGAAAGA___CAAA_______ | 3' | | | _______________ACC____AGUAUUA | | | | _______________|||____||||||| | | | | _______________UGG____UCAUAAU | | (miRNA) | 3' | ______________A___UCCG_______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 894-919 | 0.00490648542602094 | 0 | | | | | | | | | | Position on chromosome: | 2:145156003-145156028 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UU____GCC_____UCCAGAC_______C | 3' | | | __UCAU___ACCAG_______CAGUAUU_ | | | | __||||___|||||_______|||||||_ | | | | __AGUA___UGGUC_______GUCAUAA_ | | (miRNA) | 3' | _U____A_______C_____________U | 5' |
|
| | |
| | | | | 2 | ENSG00000148516 (ZEB1) | hsa-miR-200b-3p | 0.999992229335884 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 3867-3890 | 0.0455045348833343 | 12 | | | | | | | | | | Position on chromosome: | 10:31816545-31816568 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | UCUGG____GUU_____UUAU________ | 3' | | | _____CAUU___UUAUC____CAGUAUUA | | | | _____|||.___|||.|____|||||||| | | | | _____GUAG___AAUGG____GUCAUAAU | | (miRNA) | 3' | ____A____U_______UCC_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 3959-3983 | 0.00724544547888041 | 15 | | | | | | | | | | Position on chromosome: | 10:31816637-31816661 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,danRer6 | Binding area: | (Transcript) | 5' | AAA___AUGCUAAAU___CUU_______U | 3' | | | ___CAU_________CCG___CAGUAUU_ | | | | ___|||_________||.___|||||||_ | | | | ___GUA_________GGU___GUCAUAA_ | | (miRNA) | 3' | __A___GUAAU_______CC________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 4119-4137 | 0.00138811895229022 | 2 | | | | | | | | | | Position on chromosome: | 10:31816797-31816815 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AUAUUUAGAU_______G___A_________ | 3' | | | __________GUC_UUA_UAG_GC_GUAUUA | | | | __________.||_|||_.||_||_|||||| | | | | __________UAG_AAU_GUC_CG_CAUAAU | | (miRNA) | 3' | _________G___U___G______U______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 4396-4412 | 0.0106475639320834 | 11 | | | | | | | | | | Position on chromosome: | 10:31817074-31817090 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGUGCUGUAAG_____UUUCU_______U | 3' | | | ___________UGCCA_____CAGUAUU_ | | | | ___________|.|||_____|||||||_ | | | | ___________AUGGU_____GUCAUAA_ | | (miRNA) | 3' | __________A_____CC__________U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 4745-4764 | 0.069169212061301 | 14 | | | | | | | | | | Position on chromosome: | 10:31817423-31817442 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2,tetNig2,danRer6 | Binding area: | (Transcript) | 5' | CAUUAGCUG___U_____UAU________ | 3' | | | _________AUU_UUACC___CAGUAUUA | | | | _________||._|||||___|||||||| | | | | _________UAG_AAUGG___GUCAUAAU | | (miRNA) | 3' | ________G___U_____UCC________ | 5' |
|
| | | | | | | | | UTR3 | 9mer | 4814-4834 | 0.046812807357166 | 15 | | | | | | | | | | Position on chromosome: | 10:31817492-31817512 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,fr2,danRer6 | Binding area: | (Transcript) | 5' | ACUGUAUG__U___A____U__________ | 3' | | | ________UC_UCA__ACC_GGCAGUAUUA | | | | ________||_|||__|||_|||||||||| | | | | ________AG_AGU__UGG_CCGUCAUAAU | | (miRNA) | 3' | __________U___AA___U__________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 4932-4953 | 0.00454911396768761 | 16 | | | | | | | | | | Position on chromosome: | 10:31817610-31817631 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | UGUAGUG___AA_____GU__UUU______ | 3' | | | _______UAU___UACU__AG___GUAUUA | | | | _______.||___|||.__||___|||||| | | | | _______GUA___AUGG__UC___CAUAAU | | (miRNA) | 3' | ______A___GUA________CGU______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 5088-5111 | 0.00495905820713988 | 13 | | | | | | | | | | Position on chromosome: | 10:31817766-31817789 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UAGAA__GA___UAAAU___AAU______ | 3' | | | _____CA__ACU_____GGG___GUAUUA | | | | _____||__||._____.||___|||||| | | | | _____GU__UGG_____UCC___CAUAAU | | (miRNA) | 3' | ____A__AA___________GU_______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 5468-5484 | 0.0127188986664423 | 2 | | | | | | | | | | Position on chromosome: | 10:31818146-31818162 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UGUCAUUCUUU_____________________U | 3' | | | ___________UCAUCAUUAU____CAGUAUU_ | | | | ___________|||||||||.____|||||||_ | | | | ___________AGUAGUAAUG____GUCAUAA_ | | (miRNA) | 3' | _____________________GUCC_______U | 5' |
|
| | |
| | | | | 3 | ENSG00000134532 (SOX5) | hsa-miR-200b-3p | 0.999981787364379 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 3064-3077 | 0.00131893572488417 | 2 | | | | | | | | | | Position on chromosome: | 12:23685504-23685517 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AGUCCAACUUUGGU______G___________U | 3' | | | ______________UCA__A_CAG__AGUAUU_ | | | | ______________|||__|_|||__||||||_ | | | | ______________AGU__U_GUC__UCAUAA_ | | (miRNA) | 3' | _____________U___AA_G___CG______U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 561-579 | 0.0254325601747534 | 10 | | | | | | | | | | Position on chromosome: | 12:23683001-23683019 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GUUGGUUUA______CUUUUA_______U | 3' | | | _________GCCAGG______CAGUAUU_ | | | | _________.|||||______|||||||_ | | | | _________UGGUCC______GUCAUAA_ | | (miRNA) | 3' | ________A___________________U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 438-463 | 0.0245139557631777 | 12 | | | | | | | | | | Position on chromosome: | 12:23682878-23682903 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UC_____C__GU___CUAAAA_______U | 3' | | | __CGUCA_UG__UCA______CAGUAUU_ | | | | __|.|||_|.__.||______|||||||_ | | | | __GUAGU_AU__GGU______GUCAUAA_ | | (miRNA) | 3' | _A_____A_______CC___________U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 41-61 | 0.155215223877064 | 16 | | | | | | | | | | Position on chromosome: | 12:23682481-23682501 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | UUUUUUUG____CU__UUUUU________ | 3' | | | ________CAUU__CC_____CAGUAUUA | | | | ________||||__||_____|||||||| | | | | ________GUAA__GG_____GUCAUAAU | | (miRNA) | 3' | _______A____U___UCC__________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1796-1818 | 0.0227843223531923 | 0 | | | | | | | | | | Position on chromosome: | 12:23908644;23998917-23908658;23998924 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AAACGA_____AAGAAACCCC________ | 3' | | | ______GCCGG__________CAGUAUUG | | | | ______.||.|__________|||||||. | | | | ______UGGUC__________GUCAUAAU | | (miRNA) | 3' | _____A_____C_________________ | 5' |
|
| | |
| | | | | 4 | ENSG00000176165 (FOXG1) | hsa-miR-200b-3p | 0.999966579983067 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 296-321 | 0.157405902707963 | 14 | | | | | | | | | | Position on chromosome: | 14:29238252-29238277 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6 | Binding area: | (Transcript) | 5' | GCC_____AUUUCCAUGUGU_________ | 3' | | | ___GCCAG____________GCAGUAUUA | | | | ___.||||____________||||||||| | | | | ___UGGUC____________CGUCAUAAU | | (miRNA) | 3' | __A__________________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 551-562 | 0.0217458872740773 | 7 | | | | | | | | | | Position on chromosome: | 14:29238507-29238518 | Conserved species: | panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AGAAAAUGCACUUGGUA_______________ | 3' | | | _________________UACUA___AGUAUUA | | | | _________________|||.|___||||||| | | | | _________________AUGGU___UCAUAAU | | (miRNA) | 3' | ________________A_____CCG_______ | 5' |
|
| | |
| | | | | 5 | ENSG00000150625 (GPM6A) | hsa-miR-200b-3p | 0.999958832662702 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 728-746 | 0.0513671437107508 | 11 | | | | | | | | | | Position on chromosome: | 4:176554813-176554831 | Conserved species: | rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GGAAUUUUAA__AAG_G__AU________ | 3' | | | __________CA___A_CA__CAGUAUUA | | | | __________||___|_||__|||||||| | | | | __________GU___U_GU__GUCAUAAU | | (miRNA) | 3' | _________A__AA__G__CC________ | 5' |
|
| | | | | | | | | UTR3 | 8mer+wobble | 586-611 | 0.00572470437711519 | 6 | | | | | | | | | | Position on chromosome: | 4:176554671-176554696 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,dasNov2 | Binding area: | (Transcript) | 5' | UUU___GUG___AAA______________ | 3' | | | ___UCA___UAU___ACUAGGUAGUAUUG | | | | ___|||___.||___||.|||.||||||. | | | | ___AGU___GUA___UGGUCCGUCAUAAU | | (miRNA) | 3' | ______A_____A________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 401-425 | 0.0174886515940534 | 6 | | | | | | | | | | Position on chromosome: | 4:176554486-176554510 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GUGG___G_____G__UUCC_________ | 3' | | | ____CAU_AUUAU_CA____GUAGUAUUA | | | | ____|||_||||._||____|.||||||| | | | | ____GUA_UAAUG_GU____CGUCAUAAU | | (miRNA) | 3' | ___A___G________C____________ | 5' |
|
| | | | | | | | | UTR3 | 9mer | 312-340 | 0.0693959002360213 | 11 | | | | | | | | | | Position on chromosome: | 4:176554397-176554425 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | ___A____UUUCUGAUA__U_________ | 3' | | | UCA_CAUU_________UA_GCAGUAUUA | | | | |||_||||_________.|_||||||||| | | | | AGU_GUAA_________GU_CGUCAUAAU | | (miRNA) | 3' | ___A____UG_________C_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 290-311 | 0.0196677058470489 | 9 | | | | | | | | | | Position on chromosome: | 4:176554375-176554396 | Conserved species: | panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | AGUAUUA__GAUAU_____CAAA_______ | 3' | | | _______CA______UCAG____AGUAUUA | | | | _______||______.|||____||||||| | | | | _______GU______GGUC____UCAUAAU | | (miRNA) | 3' | ______A__AGUAAU____CG_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 258-269 | 0.00397150235131332 | 1 | | | | | | | | | | Position on chromosome: | 4:176554343-176554354 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GCUUCUUUAAAUUCUA______________U | 3' | | | ________________UAUUA__UAGUAUU_ | | | | ________________||..|__.||||||_ | | | | ________________AUGGU__GUCAUAA_ | | (miRNA) | 3' | _______________A_____CC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 162-187 | 0.00812850302554237 | 9 | | | | | | | | | | Position on chromosome: | 4:176554247-176554272 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GAC___UUU___UUUUAUUUCU_______ | 3' | | | ___ACU___GGC__________GGUAUUA | | | | ___||.___|||__________.|||||| | | | | ___UGG___CCG__________UCAUAAU | | (miRNA) | 3' | __A___U______________________ | 5' |
|
| | |
| | | | | 6 | ENSG00000070778 (PTPN21) | hsa-miR-200b-3p | 0.999913135540823 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 3345-3370 | 0.156816255672386 | 14 | | | | | | | | | | Position on chromosome: | 14:88974353;88983436-88974364;88983449 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2 | Binding area: | (Transcript) | 5' | CAG__GGAG_________UAU________ | 3' | | | ___CA____AUUACCAGG___CAGUAUUA | | | | ___||____|||||||||___|||||||| | | | | ___GU____UAAUGGUCC___GUCAUAAU | | (miRNA) | 3' | __A__AG______________________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3308-3326 | 0.00203519749619379 | 2 | | | | | | | | | | Position on chromosome: | 14:88974316-88974334 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GAAGAAAGA________GA___A______C | 3' | | | _________UAUC_UUG__AGG_AGUAUU_ | | | | _________.|||_||.__|||_||||||_ | | | | _________GUAG_AAU__UCC_UCAUAA_ | | (miRNA) | 3' | ________A____U___GG___G______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3164-3188 | 0.00468782144802988 | 7 | | | | | | | | | | Position on chromosome: | 14:88970813-88970837 | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | UGGG__G_____A__AUGAAAA_______ | 3' | | | ____AU_GUUAC_AG_______AGUAUUG | | | | ____||_.||||_||_______||||||. | | | | ____UA_UAAUG_UC_______UCAUAAU | | (miRNA) | 3' | ___G__G_____G__CG____________ | 5' |
|
| | |
| | | | | 7 | ENSG00000107036 (KIAA1432) | hsa-miR-200b-3p | 0.999903194140731 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 11-31 | 0.104362375460881 | 10 | | | | | | | | | | Position on chromosome: | 9:5774258-5774278 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5,xenTro2 | Binding area: | (Transcript) | 5' | UGAGGUUC_____CA_AG___________ | 3' | | | ________CAUCA__A__GGGCAGUAUUA | | | | ________|||||__|__.|||||||||| | | | | ________GUAGU__U__UCCGUCAUAAU | | (miRNA) | 3' | _______A_____AA_GG___________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 92-120 | 0.0155862381329599 | 6 | | | | | | | | | | Position on chromosome: | 9:5774339-5774367 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | ___GU___GAGACUCU____UA_______ | 3' | | | UCA__UCA________UCGG__AGUAUUA | | | | |||__|||________.|.|__||||||| | | | | AGU__AGU________GGUC__UCAUAAU | | (miRNA) | 3' | ________AAU_________CG_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 680-702 | 0.00336123738592101 | 2 | | | | | | | | | | Position on chromosome: | 9:5774927-5774949 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GUUAGA_____CUAAACUAUUUU______ | 3' | | | ______UACCA____________GUAUUA | | | | ______|||||____________|||||| | | | | ______AUGGU____________CAUAAU | | (miRNA) | 3' | _____A_____CCGU______________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 757-778 | 0.00299816941383297 | 5 | | | | | | | | | | Position on chromosome: | 9:5775004-5775025 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,loxAfr3 | Binding area: | (Transcript) | 5' | GCACUGU________UUA____UU______ | 3' | | | _______UCA_UAUU___GGGC__GUAUUA | | | | _______|||_.|||___.|||__|||||| | | | | _______AGU_GUAA___UCCG__CAUAAU | | (miRNA) | 3' | __________A____UGG____U_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1008-1016 | 0.00389582712267823 | 8 | | | | | | | | | | Position on chromosome: | 9:5775255-5775263 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | AUGUAAAUAGACUGCUGAAU__U__________ | 3' | | | ____________________CC_____GUAUUA | | | | ____________________||_____|||||| | | | | ____________________GG_____CAUAAU | | (miRNA) | 3' | ___________________U__UCCGU______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1053-1076 | 0.00214635226315647 | 2 | | | | | | | | | | Position on chromosome: | 9:5775300-5775323 | Conserved species: | panTro2,oryCun2 | Binding area: | (Transcript) | 5' | GCAU__U_______AAACUUAA______U | 3' | | | ____UC_UCAUUGU________AGUAUU_ | | | | ____||_|||||..________||||||_ | | | | ____AG_AGUAAUG________UCAUAA_ | | (miRNA) | 3' | ______U_______GUCCG_________U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 1175-1198 | 0.0496290024119602 | 12 | | | | | | | | | | Position on chromosome: | 9:5775422-5775445 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | GUAAU__UA_______UUAUAA________ | 3' | | | _____UC___AUUACC______CAGUAUUA | | | | _____||___||||||______|||||||| | | | | _____AG___UAAUGG______GUCAUAAU | | (miRNA) | 3' | _______UAG______UCC___________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1479-1490 | 0.00329332685574549 | 2 | | | | | | | | | | Position on chromosome: | 9:5775726-5775737 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UGCUUAGUUCAGAAUA_____A______________U | 3' | | | ________________CAUCG_________AGUAUU_ | | | | ________________||||._________||||||_ | | | | ________________GUAGU_________UCAUAA_ | | (miRNA) | 3' | _______________A_____AAUGGUCCG______U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1815-1836 | 0.0170297760264124 | 0 | | | | | | | | | | Position on chromosome: | 9:5756335-5756356 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AGACUGU___A_______UUUA________ | 3' | | | _______UCA_UA_UGCC____CAGUAUUG | | | | _______|||_.|_|.||____|||||||. | | | | _______AGU_GU_AUGG____GUCAUAAU | | (miRNA) | 3' | __________A__A____UCC_________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 3616-3633 | 0.0191133671690617 | 0 | | | | | | | | | | Position on chromosome: | 9:5770279;5772564-5770278;5772581 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AUCUAAUAAAG__G__GAAU___________ | 3' | | | ___________GU_AU______GCAGUAUUG | | | | ___________.|_||______||||||||. | | | | ___________UA_UA______CGUCAUAAU | | (miRNA) | 3' | __________G__G__AUGGUC_________ | 5' |
|
| | |
| | | | | 8 | ENSG00000110422 (HIPK3) | hsa-miR-200b-3p | 0.999898053489135 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 363-385 | 0.00690495363300928 | 7 | | | | | | | | | | Position on chromosome: | 11:33375478-33375500 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1 | Binding area: | (Transcript) | 5' | GAAUUA__G______A__U_AAUU______ | 3' | | | ______CA_CA_UAC_AG_G____GUAUUA | | | | ______||_||_|||_||_|____|||||| | | | | ______GU_GU_AUG_UC_C____CAUAAU | | (miRNA) | 3' | _____A__A__A___G____GU________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 1031-1043 | 0.0408065928301871 | 14 | | | | | | | | | | Position on chromosome: | 11:33376146-33376158 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2 | Binding area: | (Transcript) | 5' | UCUUAGCUUGGGCAA____U________U | 3' | | | _______________ACCA_GCAGUAUU_ | | | | _______________||||_||||||||_ | | | | _______________UGGU_CGUCAUAA_ | | (miRNA) | 3' | ______________A____C________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1129-1152 | 0.00332104289912258 | 7 | | | | | | | | | | Position on chromosome: | 11:33376244-33376267 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2 | Binding area: | (Transcript) | 5' | GAGA____UUUUUUUUUUUUUA______U | 3' | | | ____GGGU______________AGUAUU_ | | | | ____.||.______________||||||_ | | | | ____UCCG______________UCAUAA_ | | (miRNA) | 3' | ___G________________________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1430-1447 | 0.00339560570511558 | 11 | | | | | | | | | | Position on chromosome: | 11:33376545-33376562 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | GUAAAGGUGGA___UA____AAA_______ | 3' | | | ___________AUU___AGG___GGUAUUA | | | | ___________|||___|||___.|||||| | | | | ___________UAA___UCC___UCAUAAU | | (miRNA) | 3' | __________G___UGG___G_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1726-1743 | 0.0139606378146161 | 15 | | | | | | | | | | Position on chromosome: | 11:33376841-33376858 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2 | Binding area: | (Transcript) | 5' | UUUGGGGUGU______UG__U________U | 3' | | | __________GUUAUU__CA__CAGUAUU_ | | | | __________.|.|||__||__|||||||_ | | | | __________UAGUAA__GU__GUCAUAA_ | | (miRNA) | 3' | _________G______UG__CC_______U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 2138-2145 | 0.0323968611795959 | 13 | | | | | | | | | | Position on chromosome: | 11:33377253-33377260 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGAAAUUGAUUUUAAAAAUUA________ | 3' | | | _____________________CAGUAUUA | | | | _____________________|||||||| | | | | _____________________GUCAUAAU | | (miRNA) | 3' | ____________________C________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 2634-2658 | 0.0296244413033244 | 2 | | | | | | | | | | Position on chromosome: | 11:33377749-33377773 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AACU___A____U___UAAUA________ | 3' | | | ____UCA_CAUU_UCA_____CAGUAUUA | | | | ____|||_||||_.||_____|||||||| | | | | ____AGU_GUAA_GGU_____GUCAUAAU | | (miRNA) | 3' | _______A____U___CC___________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2971-2985 | 0.00433942503649936 | 4 | | | | | | | | | | Position on chromosome: | 11:33378086-33378100 | Conserved species: | rheMac2,dasNov2,loxAfr3,galGal3 | Binding area: | (Transcript) | 5' | CGUGUUUAAUUAAA_____________________ | 3' | | | ______________UAU_GUUACU_____GUAUUA | | | | ______________.||_.||||._____|||||| | | | | ______________GUA_UAAUGG_____CAUAAU | | (miRNA) | 3' | _____________A___G______UCCGU______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3280-3296 | 0.0111037425583788 | 12 | | | | | | | | | | Position on chromosome: | 11:33378395-33378411 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2 | Binding area: | (Transcript) | 5' | AAUGUCUAUUA_______UG__A________U | 3' | | | ___________CG__GUU__CG__UAGUAUU_ | | | | ___________|.__.||__|.__.||||||_ | | | | ___________GU__UAA__GU__GUCAUAA_ | | (miRNA) | 3' | __________A__AG___UG__CC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3398-3412 | 0.0150690700411304 | 14 | | | | | | | | | | Position on chromosome: | 11:33378513-33378527 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2,tetNig2,fr2 | Binding area: | (Transcript) | 5' | GUGUCAAAAUAAGA___UAU___________ | 3' | | | ______________AUU____GGU_GUAUUA | | | | ______________|||____||._|||||| | | | | ______________UAA____CCG_CAUAAU | | (miRNA) | 3' | _____________G___UGGU___U______ | 5' |
|
| | |
| | | | | 9 | ENSG00000164985 (PSIP1) | hsa-miR-200b-3p | 0.99985222879471 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1269-1297 | 0.154854473607688 | 11 | | | | | | | | | | Position on chromosome: | 9:15465333-15465361 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | ______CUAAGUG____U_U_________ | 3' | | | UUAUCG_______UACU_G_GCAGUAUUA | | | | |.|||._______|||._|_||||||||| | | | | AGUAGU_______AUGG_C_CGUCAUAAU | | (miRNA) | 3' | ______A__________U___________ | 5' |
|
| | |
| | | | | 10 | ENSG00000159082 (SYNJ1) | hsa-miR-200b-3p | 0.999820392888986 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 2165-2180 | 0.0021583253628008 | 1 | | | | | | | | | | Position on chromosome: | 21:34003234-34003249 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AGAGCUAAGAGA_UU____AUU______U | 3' | | | ____________A__GGGC___AGUAUU_ | | | | ____________|__.|||___||||||_ | | | | ____________U__UCCG___UCAUAA_ | | (miRNA) | 3' | ___________A_GG_____________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1846-1864 | 0.00480514867528173 | 7 | | | | | | | | | | Position on chromosome: | 21:34002915-34002933 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3 | Binding area: | (Transcript) | 5' | UUGUUAACA___GG____UUUG______U | 3' | | | _________AUU__UAUC____AGUAUU_ | | | | _________||.__||.|____||||||_ | | | | _________UAG__AUGG____UCAUAA_ | | (miRNA) | 3' | ________G___UA____UCCG______U | 5' |
|
| | | | | | | | | UTR3 | 9mer | 551-570 | 0.0612515613245411 | 8 | | | | | | | | | | Position on chromosome: | 21:34001620-34001639 | Conserved species: | panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | CAGCAGUAG____UUAAA____________ | 3' | | | _________CGUC_____CA_GCAGUAUUA | | | | _________|.||_____||_||||||||| | | | | _________GUAG_____GU_CGUCAUAAU | | (miRNA) | 3' | ________A____UAAUG__C_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 247-263 | 0.00726668558332765 | 5 | | | | | | | | | | Position on chromosome: | 21:34001316-34001332 | Conserved species: | panTro2,rheMac2,oryCun2,loxAfr3,galGal3 | Binding area: | (Transcript) | 5' | CAAAUAACUAGC___________U_________ | 3' | | | ____________CAUUAUU_CUA____GUAUUA | | | | ____________|||.|||_|.|____|||||| | | | | ____________GUAGUAA_GGU____CAUAAU | | (miRNA) | 3' | ___________A_______U___CCGU______ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 81-101 | 0.0801802364080216 | 8 | | | | | | | | | | Position on chromosome: | 21:34001150-34001170 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,galGal3 | Binding area: | (Transcript) | 5' | ACUAUAAA_U____AGA__UA________ | 3' | | | ________C_UUAU___AG__CAGUAUUA | | | | ________|_|||.___||__|||||||| | | | | ________G_AAUG___UC__GUCAUAAU | | (miRNA) | 3' | _______A_U____G____C_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1197-1224 | 0.00813039501045672 | 0 | | | | | | | | | | Position on chromosome: | 21:34029101-34029128 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | U___GGGUCC_____AUGGUA________ | 3' | | | _UCA______ACCAG______CAGUAUUG | | | | _|||______|||||______|||||||. | | | | _AGU______UGGUC______GUCAUAAU | | (miRNA) | 3' | ____AGUAA______C_____________ | 5' |
|
| | |
| | | | | 11 | ENSG00000115963 (RND3) | hsa-miR-200b-3p | 0.999712074981838 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 201-222 | 0.100910968915085 | 12 | | | | | | | | | | Position on chromosome: | 2:151324910-151324931 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | GAUGCAG__________UU___________ | 3' | | | _______CAUUA_UGCU__GGGCAGUAUUA | | | | _______|||.|_|.|.__.|||||||||| | | | | _______GUAGU_AUGG__UCCGUCAUAAU | | (miRNA) | 3' | ______A_____A_________________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 57-75 | 0.0430392281088273 | 10 | | | | | | | | | | Position on chromosome: | 2:151324766-151324784 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UUUGUUUGG___AU___U____________U | 3' | | | _________UCA__GUU_CC__GCAGUAUU_ | | | | _________|||__.||_||__||||||||_ | | | | _________AGU__UAA_GG__CGUCAUAA_ | | (miRNA) | 3' | ____________AG___U__UC________U | 5' |
|
| | |
| | | | | 12 | ENSG00000080546 (SESN1) | hsa-miR-200b-3p | 0.999709119652889 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 877-897 | 0.014171253898372 | 6 | | | | | | | | | | Position on chromosome: | 6:109308517-109308537 | Conserved species: | panTro2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | GUGAAGA__GGC_____UUCA_______U | 3' | | | _______CA___UGCCA____CAGUAUU_ | | | | _______||___|.|||____|||||||_ | | | | _______GU___AUGGU____GUCAUAA_ | | (miRNA) | 3' | ______A__A_______CC_________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 91-115 | 0.00922676624785118 | 7 | | | | | | | | | | Position on chromosome: | 6:109307731-109307755 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AAUG__AA_______UUGAAAAUAU______ | 3' | | | ____CA____CAGGU__________GUAUUA | | | | ____||____||||.__________|||||| | | | | ____GU____GUCCG__________CAUAAU | | (miRNA) | 3' | ___A__AAUG_____U_______________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 40-52 | 0.120385225588993 | 13 | | | | | | | | | | Position on chromosome: | 6:109307680-109307692 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGAAUUGCUUUUGAAG__U_U________ | 3' | | | ________________UC_G_CAGUAUUA | | | | ________________.|_|_|||||||| | | | | ________________GG_C_GUCAUAAU | | (miRNA) | 3' | _______________U__U_C________ | 5' |
|
| | |
| | | | | 13 | ENSG00000155130 (MARCKS) | hsa-miR-200b-3p | 0.999570862295608 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 278-299 | 0.101067413822988 | 14 | | | | | | | | | | Position on chromosome: | 6:114182034-114182055 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,xenTro2,tetNig2,fr2,danRer6 | Binding area: | (Transcript) | 5' | UUAUUUU_____UUU___CAU________ | 3' | | | _______UUAUU___UCG___CAGUAUUA | | | | _______|.|||___.|.___|||||||| | | | | _______AGUAA___GGU___GUCAUAAU | | (miRNA) | 3' | ______U_____U_____CC_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 756-782 | 0.00655039894961555 | 13 | | | | | | | | | | Position on chromosome: | 6:114182512-114182538 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UG___UUAAUAA__U___AUUAU______ | 3' | | | __ACC_______AG_GUA_____GUAUUA | | | | __|||_______||_|.|_____|||||| | | | | __UGG_______UC_CGU_____CAUAAU | | (miRNA) | 3' | _A___________________________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1671-1691 | 0.00199356721537024 | 4 | | | | | | | | | | Position on chromosome: | 6:114183427-114183447 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | AAUGUGUU___AAA____AU___________ | 3' | | | ________UCA___AUUG___GGU_GUAUUA | | | | ________|||___|||.___||._|||||| | | | | ________AGU___UAAU___CCG_CAUAAU | | (miRNA) | 3' | ___________AG_____GGU___U______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2683-2705 | 0.00703042315957149 | 7 | | | | | | | | | | Position on chromosome: | 6:114184439-114184461 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AAAAAU____AUAU___UUUUUU______ | 3' | | | ______GUUA____GGC______GUAUUA | | | | ______.|||____|||______|||||| | | | | ______UAAU____CCG______CAUAAU | | (miRNA) | 3' | _____G____GGU____U___________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 2742-2762 | 0.0207835780828109 | 5 | | | | | | | | | | Position on chromosome: | 6:114184498-114184518 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | AUAAAUAA____UUGUA___UU________ | 3' | | | ________C_UC_____CAG__CAGUAUUG | | | | ________|_||_____|||__|||||||. | | | | ________G_AG_____GUC__GUCAUAAU | | (miRNA) | 3' | _______A_U__UAAUG___C_________ | 5' |
|
| | |
| | | | | 14 | ENSG00000108443 (RPS6KB1) | hsa-miR-200b-3p | 0.999558612447416 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 194-201 | 0.00789800724813894 | 9 | | | | | | | | | | Position on chromosome: | 17:58024344-58024351 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | AAAAAAAAACUUAAAGCAAAA________ | 3' | | | _____________________UAGUAUUG | | | | _____________________.||||||. | | | | _____________________GUCAUAAU | | (miRNA) | 3' | ____________________C________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 279-297 | 0.0669584632433865 | 11 | | | | | | | | | | Position on chromosome: | 17:58024429-58024447 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUGUUGAUGA_____AA_____A________ | 3' | | | __________C_UCG__ACU_G_CAGUAUUA | | | | __________|_||.__||._|_|||||||| | | | | __________G_AGU__UGG_C_GUCAUAAU | | (miRNA) | 3' | _________A_U___AA___U_C________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 900-926 | 0.00736604029660437 | 9 | | | | | | | | | | Position on chromosome: | 17:58025050-58025076 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,galGal3 | Binding area: | (Transcript) | 5' | A____CC___UGUUCUUACAC_______U | 3' | | | _AUCG__ACC___________CAGUAUU_ | | | | _|||.__|||___________|||||||_ | | | | _UAGU__UGG___________GUCAUAA_ | | (miRNA) | 3' | G____AA___UCC_______________U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 2808-2830 | 0.0117616354731603 | 7 | | | | | | | | | | Position on chromosome: | 17:58026958-58026980 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | CCAGCU__G____A__AUGUAA_______ | 3' | | | ______GU_AUUA_CA______AGUAUUA | | | | ______.|_||||_||______||||||| | | | | ______UA_UAAU_GU______UCAUAAU | | (miRNA) | 3' | _____G__G____G__CCG__________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 3040-3056 | 0.0176904475510195 | 5 | | | | | | | | | | Position on chromosome: | 17:58027190-58027206 | Conserved species: | panTro2,rheMac2,canFam2,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AUAAACAAGAUG____________A________ | 3' | | | ____________CAUC____UUAG_UAGUAUUA | | | | ____________||||____..||_.||||||| | | | | ____________GUAG____GGUC_GUCAUAAU | | (miRNA) | 3' | ___________A____UAAU____C________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3280-3299 | 0.00457153196964056 | 5 | | | | | | | | | | Position on chromosome: | 17:58027430-58027449 | Conserved species: | panTro2,rheMac2,bosTau4,dasNov2,monDom5 | Binding area: | (Transcript) | 5' | AAGCUGGA__AAC_____CAAA______U | 3' | | | ________CA___UAUCA____AGUAUU_ | | | | ________||___||.||____||||||_ | | | | ________GU___AUGGU____UCAUAA_ | | (miRNA) | 3' | _______A__A_______CCG_______U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 3363-3381 | 0.0153115009931582 | 8 | | | | | | | | | | Position on chromosome: | 17:58027513-58027531 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | UGAUUCUUAA______A__ACA_________ | 3' | | | __________CAUUAU_GC_____AGUAUUA | | | | __________|||.||_.|_____||||||| | | | | __________GUAGUA_UG_____UCAUAAU | | (miRNA) | 3' | _________A______A__GUCCG_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3551-3577 | 0.00540754654597797 | 6 | | | | | | | | | | Position on chromosome: | 17:58027701-58027727 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | UU_________UAU____UUGA_U______ | 3' | | | __UCAUC_UUG___UUAG____C_GUAUUA | | | | __|||||_||.___..||____|_|||||| | | | | __AGUAG_AAU___GGUC____G_CAUAAU | | (miRNA) | 3' | _______U__________C____U______ | 5' |
|
| | |
| | | | | 15 | ENSG00000169946 (ZFPM2) | hsa-miR-200b-3p | 0.999230548616382 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 150-172 | 0.00970790319977122 | 12 | | | | | | | | | | Position on chromosome: | 8:106815917-106815939 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UCAUUA__GUC_____G__AAGU______ | 3' | | | ______CA___CAUUA_UA____GUAUUA | | | | ______||___|||||_.|____|||||| | | | | ______GU___GUAAU_GU____CAUAAU | | (miRNA) | 3' | _____A__A_______G__CCGU______ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 199-217 | 0.0554099109468676 | 12 | | | | | | | | | | Position on chromosome: | 8:106815966-106815984 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AAAAUUAAU_____________________C | 3' | | | _________UUAUU_UUACCA_GCAGUAUU_ | | | | _________|.||._||||||_||||||||_ | | | | _________AGUAG_AAUGGU_CGUCAUAA_ | | (miRNA) | 3' | ______________U______C________U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 735-757 | 0.0486020210078014 | 13 | | | | | | | | | | Position on chromosome: | 8:106816502-106816524 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AAUGAA__AA________AA_________ | 3' | | | ______CA__AUUACUGG__GCAGUAUUG | | | | ______||__|||||..|__||||||||. | | | | ______GU__UAAUGGUC__CGUCAUAAU | | (miRNA) | 3' | _____A__AG___________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 750-777 | 0.0206352809494219 | 8 | | | | | | | | | | Position on chromosome: | 8:106816517-106816544 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | G__G_____UAAGUAA_G___________ | 3' | | | _CA_UAUUG_______U_AGGUAGUAUUA | | | | _||_.|||._______._|||.||||||| | | | | _GU_GUAAU_______G_UCCGUCAUAAU | | (miRNA) | 3' | A__A_____________G___________ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 2101-2125 | 0.0171673302330499 | 0 | | | | | | | | | | Position on chromosome: | 8:106814412-106814436 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GAAA___A___GGU___CAAA________ | 3' | | | ____CAU_CAU___CCA____CAGUAUUA | | | | ____|||_|||___|||____|||||||| | | | | ____GUA_GUA___GGU____GUCAUAAU | | (miRNA) | 3' | ___A_______AU____CC__________ | 5' |
|
| | |
| | | | | 16 | ENSG00000122707 (RECK) | hsa-miR-200b-3p | 0.999044391620611 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 107-131 | 0.0164310678593425 | 0 | | | | | | | | | | Position on chromosome: | 9:36123150-36123174 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AUG___CC__U___C____CA_______U | 3' | | | ___UCA__UC_AUU_GCCA__CAGUAUU_ | | | | ___|||__||_|||_.|||__|||||||_ | | | | ___AGU__AG_UAA_UGGU__GUCAUAA_ | | (miRNA) | 3' | ___________________CC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 364-390 | 0.00415910960001054 | 1 | | | | | | | | | | Position on chromosome: | 9:36123407-36123433 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | U__________A__UCUUUUUGA______U | 3' | | | _UCAUU_UCAG_GU_________AGUAUU_ | | | | _|||||_.|||_|._________||||||_ | | | | _AGUAA_GGUC_CG_________UCAUAA_ | | (miRNA) | 3' | U_____U______________________U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1053-1079 | 0.0238652946192952 | 6 | | | | | | | | | | Position on chromosome: | 9:36124096-36124122 | Conserved species: | panTro2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UA____UAAAAG_____A__UG_______ | 3' | | | __UAUU______UGUCA_GC__AGUAUUA | | | | __.||.______|..||_||__||||||| | | | | __GUAG______AUGGU_CG__UCAUAAU | | (miRNA) | 3' | _A____UA_________C___________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1185-1201 | 0.00680674540606488 | 5 | | | | | | | | | | Position on chromosome: | 9:36124228-36124244 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | CAUGAACUUAG________AUGA_______U | 3' | | | ___________AUU_UUAC_____AGUAUU_ | | | | ___________||._||||_____||||||_ | | | | ___________UAG_AAUG_____UCAUAA_ | | (miRNA) | 3' | __________G___U____GUCCG______U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 1191-1213 | 0.069598385146028 | 8 | | | | | | | | | | Position on chromosome: | 9:36124234-36124256 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | AUUUUA___G_AG____UUUU________ | 3' | | | ______CAU_A__UAUU____CAGUAUUA | | | | ______|||_|__||..____|||||||| | | | | ______GUA_U__AUGG____GUCAUAAU | | (miRNA) | 3' | _____A___G_A_____UCC_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1230-1250 | 0.00523576043568197 | 2 | | | | | | | | | | Position on chromosome: | 9:36124273-36124293 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CUCUGAAA___A____G_UAUGC______ | 3' | | | ________UAC_UAGG_A_____GUAUUA | | | | ________|||_.|||_|_____|||||| | | | | ________AUG_GUCC_U_____CAUAAU | | (miRNA) | 3' | _______A________G____________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1265-1290 | 0.00529584725297121 | 0 | | | | | | | | | | Position on chromosome: | 9:36100508-36100533 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | UUG____AG___AAUC_____GA_______ | 3' | | | ___UCAU___UA____UCGGG__AGUAUUA | | | | ___||||___||____.|.||__||||||| | | | | ___AGUA___AU____GGUCC__UCAUAAU | | (miRNA) | 3' | _______GUA___________G________ | 5' |
|
| | |
| | | | | 17 | ENSG00000198853 (RUSC2) | hsa-miR-200b-3p | 0.999029160216102 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 141-152 | 0.0979262496693964 | 8 | | | | | | | | | | Position on chromosome: | 9:35561521-35561532 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CUGGCACCUGCUCCCUG_______________ | 3' | | | _________________UGCU___CAGUAUUA | | | | _________________|.|.___|||||||| | | | | _________________AUGG___GUCAUAAU | | (miRNA) | 3' | ________________A____UCC________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 344-365 | 0.0290900857338505 | 9 | | | | | | | | | | Position on chromosome: | 9:35561724-35561745 | Conserved species: | panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | GGUGGAG__G___AUGGGUAA________ | 3' | | | _______AU_AGG________CAGUAUUG | | | | _______|._|||________|||||||. | | | | _______UG_UCC________GUCAUAAU | | (miRNA) | 3' | ______A__G___________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1313-1336 | 0.00870540930301409 | 0 | | | | | | | | | | Position on chromosome: | 9:35547832-35547855 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CCAGG_CC_________C_CUCUG_______ | 3' | | | _____C__CA__GCCAG_C_____AGUAUUA | | | | _____|__||__.||||_|_____||||||| | | | | _____G__GU__UGGUC_G_____UCAUAAU | | (miRNA) | 3' | ____A_UA__AA_____C_____________ | 5' |
|
| | |
| | | | | 18 | ENSG00000108960 (MMD) | hsa-miR-200b-3p | 0.99900473167102 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 1689-1702 | 0.111120636964506 | 13 | | | | | | | | | | Position on chromosome: | 17:53471663-53471676 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AUCUGUACUAAUUCU___AAC________ | 3' | | | _______________CCA___CAGUAUUA | | | | _______________|||___|||||||| | | | | _______________GGU___GUCAUAAU | | (miRNA) | 3' | ______________U___CC_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 966-987 | 0.00448672955268887 | 5 | | | | | | | | | | Position on chromosome: | 17:53470940-53470961 | Conserved species: | panTro2,rheMac2,oryCun2,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | CUUGGU_______U_AUGGAAA______U | 3' | | | ______UUACCAG_G_______AGUAUU_ | | | | ______|||||||_|_______||||||_ | | | | ______AAUGGUC_C_______UCAUAA_ | | (miRNA) | 3' | _____U_________G____________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 862-869 | 0.00230366141353063 | 3 | | | | | | | | | | Position on chromosome: | 17:53470836-53470843 | Conserved species: | panTro2,rheMac2,bosTau4 | Binding area: | (Transcript) | 5' | CACAGUGGAUAAAUGUUUUUU_U______ | 3' | | | _____________________C_GUAUUA | | | | _____________________|_|||||| | | | | _____________________G_CAUAAU | | (miRNA) | 3' | ____________________C_U______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 851-866 | 0.00381120906511492 | 1 | | | | | | | | | | Position on chromosome: | 17:53470825-53470840 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AAUGUUUUUUCUG______G___________ | 3' | | | _____________UAUUAU_A__CAGUAUUG | | | | _____________.||||._|__|||||||. | | | | _____________GUAAUG_U__GUCAUAAU | | (miRNA) | 3' | ____________A______G_CC________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 805-825 | 0.0016764689568891 | 2 | | | | | | | | | | Position on chromosome: | 17:53470779-53470799 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UGGAAACU__UGA__A___UUAU______ | 3' | | | ________CC___AG_GCA____GUAUUA | | | | ________||___||_|||____|||||| | | | | ________GG___UC_CGU____CAUAAU | | (miRNA) | 3' | _______U_____________________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 539-563 | 0.00607090225934115 | 6 | | | | | | | | | | Position on chromosome: | 17:53470513-53470537 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2 | Binding area: | (Transcript) | 5' | UGGC____U_G__UGAUAUUUAUG_____ | 3' | | | ____UCAG_G_AG___________UAUUA | | | | ____.|||_|_||___________||||| | | | | ____GGUC_C_UC___________AUAAU | | (miRNA) | 3' | ___U______G__________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 481-499 | 0.0165227606515462 | 0 | | | | | | | | | | Position on chromosome: | 17:53488651-53488669 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | GUGCCCUCU________U____________U | 3' | | | _________UCAUCGUU_CUA__CAGUAUU_ | | | | _________|||||.||_|.|__|||||||_ | | | | _________AGUAGUAA_GGU__GUCAUAA_ | | (miRNA) | 3' | _________________U___CC_______U | 5' |
|
| | |
| | | | | 19 | ENSG00000134769 (DTNA) | hsa-miR-200b-3p | 0.998957830284087 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 374-395 | 0.114635178819932 | 10 | | | | | | | | | | Position on chromosome: | 18:32468073-32468094 | Conserved species: | panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UGCUGCU________A__AU__________ | 3' | | | _______GUUA_UAC_CA__GGCAGUAUUA | | | | _______.|.|_|||_||__|||||||||| | | | | _______UAGU_AUG_GU__CCGUCAUAAU | | (miRNA) | 3' | ______G____A__________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 2215-2233 | 0.00384351028325852 | 1 | | | | | | | | | | Position on chromosome: | 18:32469914-32469932 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UGGCCACUGG____UCAUACU________ | 3' | | | __________UGCC_______CAGUAUUG | | | | __________|.||_______|||||||. | | | | __________AUGG_______GUCAUAAU | | (miRNA) | 3' | _________A____UCC____________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3511-3528 | 0.0104636651874585 | 12 | | | | | | | | | | Position on chromosome: | 18:32471210-32471227 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AUGGAUUUUUG_______GUUA_______ | 3' | | | ___________UAUUGCU____AGUAUUG | | | | ___________.|||.|.____||||||. | | | | ___________GUAAUGG____UCAUAAU | | (miRNA) | 3' | __________A_______UCCG_______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 367-388 | 0.0173058946850409 | 0 | | | | | | | | | | Position on chromosome: | 18:32386188-32386209 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | CGGAAG____U__UAAAAUUU_______U | 3' | | | ______GCCA_GG________CAGUAUU_ | | | | ______.|||_||________|||||||_ | | | | ______UGGU_CC________GUCAUAA_ | | (miRNA) | 3' | _____A______________________U | 5' |
|
| | |
| | | | | 20 | ENSG00000118985 (ELL2) | hsa-miR-200b-3p | 0.998837353597507 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 3657-3675 | 0.0695100209314244 | 10 | | | | | | | | | | Position on chromosome: | 5:95224459-95224477 | Conserved species: | panTro2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | AACUUUGGCU____AA__UUU________ | 3' | | | __________GUUG__AG___CAGUAUUA | | | | __________.||.__||___|||||||| | | | | __________UAAU__UC___GUCAUAAU | | (miRNA) | 3' | _________G____GG__C__________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2696-2714 | 0.00650461731859547 | 13 | | | | | | | | | | Position on chromosome: | 5:95223498-95223516 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | ACCUAUUUA___AC______UAA______U | 3' | | | _________UAU___UGCUA___AGUAUU_ | | | | _________.||___|.|.|___||||||_ | | | | _________GUA___AUGGU___UCAUAA_ | | (miRNA) | 3' | ________A___GUA_____CCG______U | 5' |
|
| | | | | | | | | UTR3 | 8mer | 656-680 | 0.0451091189233997 | 5 | | | | | | | | | | Position on chromosome: | 5:95221458-95221482 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | CAUG____G_____AAAA_UU________ | 3' | | | ____CAUU_AUUAU____A__CAGUAUUA | | | | ____|||._||||.____|__|||||||| | | | | ____GUAG_UAAUG____U__GUCAUAAU | | (miRNA) | 3' | ___A__________G____CC________ | 5' |
|
| | |
| | | | | 21 | ENSG00000117600 (LPPR4) | hsa-miR-200b-3p | 0.998711323750177 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 386-407 | 0.109720372575743 | 9 | | | | | | | | | | Position on chromosome: | 1:99772953-99772974 | Conserved species: | panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UUCCCUA__G__GAG____U_________ | 3' | | | _______CA_CA___GCCA_GCAGUAUUA | | | | _______||_||___.|||_||||||||| | | | | _______GU_GU___UGGU_CGUCAUAAU | | (miRNA) | 3' | ______A__A__AA_____C_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1467-1494 | 0.00971925619260232 | 3 | | | | | | | | | | Position on chromosome: | 1:99774034-99774061 | Conserved species: | panTro2,rheMac2,dasNov2 | Binding area: | (Transcript) | 5' | A__UAC___GUU__U__AACU________ | 3' | | | _CA___UCA___CU_GG____UAGUAUUA | | | | _||___|||___|._||____.||||||| | | | | _GU___AGU___GG_CC____GUCAUAAU | | (miRNA) | 3' | A________AAU__U______________ | 5' |
|
| | |
| | | | | 22 | ENSG00000006459 (KDM7A) | hsa-miR-200b-3p | 0.998678905594685 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 5288-5307 | 0.00933826825798978 | 6 | | | | | | | | | | Position on chromosome: | 7:139789943-139789962 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UAUUUUUCC____UGU___AAA_______ | 3' | | | _________UACU___GGG___AGUAUUA | | | | _________|||.___.||___||||||| | | | | _________AUGG___UCC___UCAUAAU | | (miRNA) | 3' | ________A__________G_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 4072-4095 | 0.00255241336314662 | 5 | | | | | | | | | | Position on chromosome: | 7:139788727-139788750 | Conserved species: | panTro2,oryCun2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUUA____UUUCA___CUCUUG______U | 3' | | | ____CGUU_____CAG______AGUAUU_ | | | | ____|.|._____|||______||||||_ | | | | ____GUAG_____GUC______UCAUAA_ | | (miRNA) | 3' | ___A____UAAUG___CG__________U | 5' |
|
| | | | | | | | | UTR3 | 9mer | 3047-3074 | 0.0242936369810916 | 5 | | | | | | | | | | Position on chromosome: | 7:139787702-139787729 | Conserved species: | panTro2,rheMac2,bosTau4,canFam2,dasNov2 | Binding area: | (Transcript) | 5' | G____UUCU____GAAAUUA_________ | 3' | | | _UAUC____CCAG_______GCAGUAUUA | | | | _.|||____||||_______||||||||| | | | | _GUAG____GGUC_______CGUCAUAAU | | (miRNA) | 3' | A____UAAU____________________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1548-1565 | 0.00209488671766144 | 3 | | | | | | | | | | Position on chromosome: | 7:139786203-139786220 | Conserved species: | panTro2,rheMac2,canFam2 | Binding area: | (Transcript) | 5' | GACUGUGAUU_____CUU____________U | 3' | | | __________UUAUU___CUA__UAGUAUU_ | | | | __________|.|||___|.|__.||||||_ | | | | __________AGUAA___GGU__GUCAUAA_ | | (miRNA) | 3' | _________U_____U_____CC_______U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 200-227 | 0.0276798024922631 | 10 | | | | | | | | | | Position on chromosome: | 7:139784855-139784882 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3 | Binding area: | (Transcript) | 5' | _____UCU_____GAUUCAUAA_______U | 3' | | | _CAUU___UUGCU_________CAGUAUU_ | | | | _|||.___||.|._________|||||||_ | | | | _GUAG___AAUGG_________GUCAUAA_ | | (miRNA) | 3' | A____U_______UCC_____________U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 160-183 | 0.0345131674812863 | 11 | | | | | | | | | | Position on chromosome: | 7:139784815-139784838 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | CCUG_____G____GAAAGUGUA_______U | 3' | | | ____CA__G_CAGG_________CAGUAUU_ | | | | ____||__._||||_________|||||||_ | | | | ____GU__U_GUCC_________GUCAUAA_ | | (miRNA) | 3' | ___A__AA_G____________________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 58-71 | 0.00780141718229245 | 4 | | | | | | | | | | Position on chromosome: | 7:139784713-139784726 | Conserved species: | panTro2,rheMac2,mm9,canFam2 | Binding area: | (Transcript) | 5' | UGACUUGUUUAAAG_UG__UU_______C | 3' | | | ______________U__UA__UAGUAUU_ | | | | ______________|__.|__.||||||_ | | | | ______________A__GU__GUCAUAA_ | | (miRNA) | 3' | _____________A_UG__CC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 12-33 | 0.0107594409865022 | 8 | | | | | | | | | | Position on chromosome: | 7:139784667-139784688 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5 | Binding area: | (Transcript) | 5' | UUUAAAA_____AAAUUAAAAUU______ | 3' | | | _______UAUUG___________GUAUUA | | | | _______.|||.___________|||||| | | | | _______GUAAU___________CAUAAU | | (miRNA) | 3' | ______A_____GGUCCGU__________ | 5' |
|
| | |
| | | | | 23 | ENSG00000164830 (OXR1) | hsa-miR-200b-3p | 0.998577297595626 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 9mer | 1622-1643 | 0.117820321787769 | 12 | | | | | | | | | | Position on chromosome: | 8:107764792-107764813 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UUCCCCU___GUCUU___CA_________ | 3' | | | _______UCG_____CCA__GCAGUAUUA | | | | _______||._____|||__||||||||| | | | | _______AGU_____GGU__CGUCAUAAU | | (miRNA) | 3' | ______U___AAU_____C__________ | 5' |
|
| | |
| | | | | 24 | ENSG00000134243 (SORT1) | hsa-miR-200b-3p | 0.998568983941437 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2175-2202 | 0.00700428531879601 | 3 | | | | | | | | | | Position on chromosome: | 1:109854367-109854394 | Conserved species: | panTro2,rheMac2,dasNov2 | Binding area: | (Transcript) | 5' | ___GUGG____UGUUU__UA________U | 3' | | | UCA____CAUU_____CC__GCAGUAUU_ | | | | |||____||||_____||__||||||||_ | | | | AGU____GUAA_____GG__CGUCAUAA_ | | (miRNA) | 3' | ___A_______U______UC________U | 5' |
|
| | | | | | | | | UTR3 | 9mer | 278-298 | 0.110720671428808 | 8 | | | | | | | | | | Position on chromosome: | 1:109852470-109852490 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | CCUUCCCA__AAAG__UA_A_________ | 3' | | | ________CG____UG__A_GCAGUAUUA | | | | ________|.____|.__|_||||||||| | | | | ________GU____AU__U_CGUCAUAAU | | (miRNA) | 3' | _______A__AGUA__GG_C_________ | 5' |
|
| | |
| | | | | 25 | ENSG00000171940 (ZNF217) | hsa-miR-200b-3p | 0.998441907151181 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 6mer | 1663-1680 | 0.00490053732699755 | 5 | | | | | | | | | | Position on chromosome: | 20:52185267-52185284 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2 | Binding area: | (Transcript) | 5' | UUUUUUAAACU____A__AUUUU________ | 3' | | | ___________GUCA_UG_______GUAUUA | | | | ___________.|||_|._______|||||| | | | | ___________UAGU_AU_______CAUAAU | | (miRNA) | 3' | __________G____A__GGUCCGU______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1610-1628 | 0.00263257182873367 | 4 | | | | | | | | | | Position on chromosome: | 20:52185214-52185232 | Conserved species: | panTro2,rheMac2,loxAfr3,monDom5 | Binding area: | (Transcript) | 5' | UUGUCUUAAA_______AU___A_______ | 3' | | | __________AUUGUUA___GG_AGUAUUG | | | | __________||..|||___||_||||||. | | | | __________UAGUAAU___CC_UCAUAAU | | (miRNA) | 3' | _________G_______GGU__G_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 367-379 | 0.00515187897118658 | 2 | | | | | | | | | | Position on chromosome: | 20:52183971-52183983 | Conserved species: | panTro2,dasNov2 | Binding area: | (Transcript) | 5' | UCUAUUUGAAAACAAG___AUUU______ | 3' | | | ________________UCG____GUAUUA | | | | ________________.|.____|||||| | | | | ________________GGU____CAUAAU | | (miRNA) | 3' | _______________U___CCGU______ | 5' |
|
| | | | | | | | | UTR3 | 8mer | 244-268 | 0.103647380975919 | 12 | | | | | | | | | | Position on chromosome: | 20:52183848-52183872 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AAAA___GU__UUGUGU___U_________ | 3' | | | ____UAU__UU______CCA__CAGUAUUA | | | | ____.||__||______|||__|||||||| | | | | ____GUA__AA______GGU__GUCAUAAU | | (miRNA) | 3' | ___A___GU__U________CC________ | 5' |
|
| | |
| | | | | 26 | ENSG00000120129 (DUSP1) | hsa-miR-200b-3p | 0.99830372095709 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 338-354 | 0.114941287723066 | 13 | | | | | | | | | | Position on chromosome: | 5:172195431-172195447 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CUUCAUGCUUGA_______UAC________ | 3' | | | ____________CA_UACC___CAGUAUUA | | | | ____________||_||||___|||||||| | | | | ____________GU_AUGG___GUCAUAAU | | (miRNA) | 3' | ___________A__A____UCC________ | 5' |
|
| | |
| | | | | 27 | ENSG00000132970 (WASF3) | hsa-miR-200b-3p | 0.998293544838603 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 7mer | 139-159 | 0.0208488827468334 | 9 | | | | | | | | | | Position on chromosome: | 13:27260122-27260142 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3 | Binding area: | (Transcript) | 5' | UCCAAAA_________UCUUUU_______U | 3' | | | _______AUU_CUGGG______CAGUAUU_ | | | | _______|||_|..||______|||||||_ | | | | _______UAA_GGUCC______GUCAUAA_ | | (miRNA) | 3' | ______G___U__________________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 259-280 | 0.00564051051603834 | 4 | | | | | | | | | | Position on chromosome: | 13:27260242-27260263 | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2 | Binding area: | (Transcript) | 5' | CUGCUU__C__UUG____U_AG______U | 3' | | | ______UC_UC___GCCA_G__AGUAUU_ | | | | ______||_||___.|||_|__||||||_ | | | | ______AG_AG___UGGU_C__UCAUAA_ | | (miRNA) | 3' | ________U__UAA____C_G_______U | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1413-1429 | 0.00423581557413962 | 2 | | | | | | | | | | Position on chromosome: | 13:27261396-27261412 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UAAGGACUUUA___UACUCAA_______U | 3' | | | ___________ACC_______CAGUAUU_ | | | | ___________|||_______|||||||_ | | | | ___________UGG_______GUCAUAA_ | | (miRNA) | 3' | __________A___UCC___________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1971-1985 | 0.00212920801929809 | 2 | | | | | | | | | | Position on chromosome: | 13:27261954-27261968 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UACUUGUCUUUCUU______UUU________ | 3' | | | ______________GUUGCU_____GUAUUA | | | | ______________.||.|._____|||||| | | | | ______________UAAUGG_____CAUAAU | | (miRNA) | 3' | _____________G______UCCGU______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2299-2315 | 0.00575188443069757 | 6 | | | | | | | | | | Position on chromosome: | 13:27262282-27262298 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | AUCCAAUUUAG______UU___________U | 3' | | | ___________AUUAUU__UAG__AGUAUU_ | | | | ___________||.|||__.||__||||||_ | | | | ___________UAGUAA__GUC__UCAUAA_ | | (miRNA) | 3' | __________G______UG___CG______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2351-2375 | 0.00245797213035169 | 2 | | | | | | | | | | Position on chromosome: | 13:27262334-27262358 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AAAU____A_CUUUUCUAAUAU_______ | 3' | | | ____CCAG_U____________GGUAUUA | | | | ____||||_.____________.|||||| | | | | ____GGUC_G____________UCAUAAU | | (miRNA) | 3' | ___U____C____________________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2528-2543 | 0.00345014679097219 | 2 | | | | | | | | | | Position on chromosome: | 13:27262511-27262526 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AAGGUAAUUUUAA______CCU________ | 3' | | | _____________AUUGUC___C_GUAUUA | | | | _____________|||..|___|_|||||| | | | | _____________UAAUGG___G_CAUAAU | | (miRNA) | 3' | ____________G______UCC_U______ | 5' |
|
| | | | | | | | | UTR3 | 9mer | 2932-2953 | 0.0648665682595758 | 8 | | | | | | | | | | Position on chromosome: | 13:27262915-27262936 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | AUCAUAG____U__C___UU_________ | 3' | | | _______UAUC_GU_AUC__GCAGUAUUA | | | | _______.|||_.|_|.|__||||||||| | | | | _______GUAG_UA_UGG__CGUCAUAAU | | (miRNA) | 3' | ______A_______A___UC_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2981-2989 | 0.0101337453380979 | 9 | | | | | | | | | | Position on chromosome: | 13:27262964-27262972 | Conserved species: | panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1 | Binding area: | (Transcript) | 5' | UGUUGUAAAUUGAAUUUAAA_________ | 3' | | | ____________________GUGGUAUUA | | | | ____________________|..|||||| | | | | ____________________CGUCAUAAU | | (miRNA) | 3' | ___________________C_________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 990-1012 | 0.0156849581185412 | 0 | | | | | | | | | | Position on chromosome: | 13:27256751-27256773 | Conserved species: | Not Conserved | Binding area: | (Transcript) | 5' | AUGCUC____C__AGAUAAUUG_______ | 3' | | | ______CCAG_GC_________AGUAUUA | | | | ______||||_||_________||||||| | | | | ______GGUC_CG_________UCAUAAU | | (miRNA) | 3' | _____U_______________________ | 5' |
|
| | |
| | | | | 28 | ENSG00000148429 (USP6NL) | hsa-miR-200b-3p | 0.998256203543278 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 8413-8434 | 0.0795106697824218 | 11 | | | | | | | | | | Position on chromosome: | 10:11504358-11504379 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5 | Binding area: | (Transcript) | 5' | CUAUGU____A_______AA________U | 3' | | | ______UCAU_AUUGCCA__GCAGUAUU_ | | | | ______||||_|||.|||__||||||||_ | | | | ______AGUA_UAAUGGU__CGUCAUAA_ | | (miRNA) | 3' | __________G_______C_________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 6951-6971 | 0.00280397284506002 | 6 | | | | | | | | | | Position on chromosome: | 10:11502896-11502916 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3 | Binding area: | (Transcript) | 5' | UUAAAUAG__AA__A__U___GU______ | 3' | | | ________CA__AC_AG_GCA__GUAUUA | | | | ________||__||_||_|||__|||||| | | | | ________GU__UG_UC_CGU__CAUAAU | | (miRNA) | 3' | _______A__AA__G______________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 6460-6472 | 0.00164298598100293 | 2 | | | | | | | | | | Position on chromosome: | 10:11502405-11502417 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UCUAAUGGAGUAGCU________________C | 3' | | | _______________GUUGCC___UAGUAUU_ | | | | _______________.||.||___.||||||_ | | | | _______________UAAUGG___GUCAUAA_ | | (miRNA) | 3' | ______________G______UCC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 5804-5810 | 0.00182152767469985 | 2 | | | | | | | | | | Position on chromosome: | 10:11501749-11501755 | Conserved species: | panTro2,oryCun2 | Binding area: | (Transcript) | 5' | UGAAGUAGUAAUUUAUAAAUU_______U | 3' | | | _____________________UAGUAUU_ | | | | _____________________.||||||_ | | | | _____________________GUCAUAA_ | | (miRNA) | 3' | ____________________C_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 5022-5039 | 0.00208211620762128 | 2 | | | | | | | | | | Position on chromosome: | 10:11500967-11500984 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | UUAAAUGUCUG____UA___GU__________ | 3' | | | ___________UAUC___AU__GG__GUAUUA | | | | ___________.|||___|.__||__|||||| | | | | ___________GUAG___UG__CC__CAUAAU | | (miRNA) | 3' | __________A____UAA__GU__GU______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3256-3271 | 0.00167001793730832 | 2 | | | | | | | | | | Position on chromosome: | 10:11499201-11499216 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | GCACUCUGCUAGA_____________________ | 3' | | | _____________CGUU_UUACU____GGUAUUA | | | | _____________|.|._||||.____.|||||| | | | | _____________GUAG_AAUGG____UCAUAAU | | (miRNA) | 3' | ____________A____U_____UCCG_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 2163-2175 | 0.00143841633929043 | 1 | | | | | | | | | | Position on chromosome: | 10:11498108-11498120 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUUUAAUUUUAAUGAA___UAAU_______ | 3' | | | ________________GCC_____GUAUUA | | | | ________________.||_____|||||| | | | | ________________UGG_____CAUAAU | | (miRNA) | 3' | _______________A___UCCGU______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 1693-1711 | 0.00319040476464618 | 2 | | | | | | | | | | Position on chromosome: | 10:11497638-11497656 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | AAGGAAGAAC_____UCUUAA________ | 3' | | | __________UGCCA______CAGUAUUG | | | | __________|.|||______|||||||. | | | | __________AUGGU______GUCAUAAU | | (miRNA) | 3' | _________A_____CC____________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 90-106 | 0.0203288548677618 | 6 | | | | | | | | | | Position on chromosome: | 10:11496035-11496051 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,canFam2 | Binding area: | (Transcript) | 5' | UUUGUUGCUUUA_______UG____________ | 3' | | | ____________CGU_AUU__UA___AGUAUUA | | | | ____________|.|_|||__.|___||||||| | | | | ____________GUA_UAA__GU___UCAUAAU | | (miRNA) | 3' | ___________A___G___UG__CCG_______ | 5' |
|
| | |
| | | | | 29 | ENSG00000196428 (TSC22D2) | hsa-miR-200b-3p | 0.9981254694736 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 113-127 | 0.0846959850770548 | 12 | | | | | | | | | | Position on chromosome: | 3:150176537-150176551 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | UGGUUGUGUGUUUG___UUUU________ | 3' | | | ______________GCC____CAGUAUUA | | | | ______________.||____|||||||| | | | | ______________UGG____GUCAUAAU | | (miRNA) | 3' | _____________A___UCC_________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1314-1339 | 0.00499119489140803 | 12 | | | | | | | | | | Position on chromosome: | 3:150177738-150177763 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3 | Binding area: | (Transcript) | 5' | AG____AGUG___U__AUACUG______U | 3' | | | __AUUA____CAG_GU______AGUAUU_ | | | | __||||____|||_|.______||||||_ | | | | __UAAU____GUC_CG______UCAUAA_ | | (miRNA) | 3' | _G____G_____________________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3063-3087 | 0.00213136706201632 | 4 | | | | | | | | | | Position on chromosome: | 3:150179487-150179511 | Conserved species: | panTro2,rheMac2,oryCun2,dasNov2 | Binding area: | (Transcript) | 5' | AUAA____CU__GCUA_____A________ | 3' | | | ____UAUC__AU____AUUAG__AGUAUUG | | | | ____.|||__||____|..||__||||||. | | | | ____GUAG__UA____UGGUC__UCAUAAU | | (miRNA) | 3' | ___A________A________CG_______ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 3665-3683 | 0.00112860690023868 | 1 | | | | | | | | | | Position on chromosome: | 3:150180089-150180107 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | GCAGUGACU__CC__CUG_____________U | 3' | | | _________UC__CA___ACC___UAGUAUU_ | | | | _________||__||___|||___.||||||_ | | | | _________AG__GU___UGG___GUCAUAA_ | | (miRNA) | 3' | ___________UA__AA____UCC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 5319-5337 | 0.00137128197536482 | 1 | | | | | | | | | | Position on chromosome: | 3:150181743-150181761 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UUGUCUACU_____GGGU____________U | 3' | | | _________GUCAU____CCA__UAGUAUU_ | | | | _________.||||____|||__.||||||_ | | | | _________UAGUA____GGU__GUCAUAA_ | | (miRNA) | 3' | ________G_____AU_____CC_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 6134-6153 | 0.00112113053041251 | 2 | | | | | | | | | | Position on chromosome: | 3:150182558-150182577 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CACCUCGA_____A____UAUGA______C | 3' | | | ________CAUCG__GCC_____AGUAUU_ | | | | ________||||.__.||_____||||||_ | | | | ________GUAGU__UGG_____UCAUAA_ | | (miRNA) | 3' | _______A_____AA___UCCG_______U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 7261-7286 | 0.00351031030932551 | 1 | | | | | | | | | | Position on chromosome: | 3:150183685-150183710 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | AAA___AG____AUAGA____UU_______ | 3' | | | ___CAU___UAC_____GGGU__GGUAUUA | | | | ___|||___|||_____.||.__.|||||| | | | | ___GUA___AUG_____UCCG__UCAUAAU | | (miRNA) | 3' | __A___GUA___G_________________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 7396-7421 | 0.00865841574511344 | 1 | | | | | | | | | | Position on chromosome: | 3:150183820-150183845 | Conserved species: | panTro2 | Binding area: | (Transcript) | 5' | UGG____U___ACACAUGAUGA_______ | 3' | | | ___ACUA_GGU___________AGUAUUA | | | | ___||.|_||.___________||||||| | | | | ___UGGU_CCG___________UCAUAAU | | (miRNA) | 3' | __A__________________________ | 5' |
|
| | | | | | | | | UTR3 | 6mer | 7619-7633 | 0.00569696978981589 | 5 | | | | | | | | | | Position on chromosome: | 3:150184043-150184057 | Conserved species: | panTro2,rheMac2,oryCun2,bosTau4,dasNov2 | Binding area: | (Transcript) | 5' | UACUUCUACAAGUA_______UG____________ | 3' | | | ______________CAU_AUU__U_____GUAUUA | | | | ______________|||_|||__._____|||||| | | | | ______________GUA_UAA__G_____CAUAAU | | (miRNA) | 3' | _____________A___G___UG_UCCGU______ | 5' |
|
| | |
| | | | | 30 | ENSG00000062650 (WAPAL) | hsa-miR-200b-3p | 0.998099314906504 | | | | | | | Gene details | | loading... | | miRNA details | | loading... | | pubMed links: miRNA | gene | both UCSC graphic | | | Region | Binding Type | Transcript position | Score | Conservation | | | | | | | | | | | | UTR3 | 8mer | 2036-2052 | 0.0704218439589647 | 13 | | | | | | | | | | Position on chromosome: | 10:88197049-88197065 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CAGGCUGUUAA__AUU___U________U | 3' | | | ___________CA___CCA_GCAGUAUU_ | | | | ___________||___|||_||||||||_ | | | | ___________GU___GGU_CGUCAUAA_ | | (miRNA) | 3' | __________A__AAU___C________U | 5' |
|
| | | | | | | | | UTR3 | 6mer | 1163-1191 | 0.00266018957944354 | 4 | | | | | | | | | | Position on chromosome: | 10:88196176-88196204 | Conserved species: | panTro2,bosTau4,canFam2,loxAfr3 | Binding area: | (Transcript) | 5' | ____AA______AAAUUUUUCUU______ | 3' | | | UCAU__CAUUGC___________GUAUUA | | | | ||||__||||.|___________|||||| | | | | AGUA__GUAAUG___________CAUAAU | | (miRNA) | 3' | ____________GUCCGU___________ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 687-704 | 0.00894315717727679 | 2 | | | | | | | | | | Position on chromosome: | 10:88195700-88195717 | Conserved species: | panTro2,rheMac2 | Binding area: | (Transcript) | 5' | CAUUGAGAUUG__________CU_________ | 3' | | | ___________UAU__UUGCC__G_AGUAUUA | | | | ___________.||__||.||__|_||||||| | | | | ___________GUA__AAUGG__C_UCAUAAU | | (miRNA) | 3' | __________A___GU_____UC_G_______ | 5' |
|
| | | | | | | | | UTR3 | 7mer | 126-147 | 0.0310531789914902 | 13 | | | | | | | | | | Position on chromosome: | 10:88195139-88195160 | Conserved species: | panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2 | Binding area: | (Transcript) | 5' | CAAUCC____U____UU__UA_______U | 3' | | | ______UAUU_UUAU__UA__CAGUAUU_ | | | | ______.||._|||.__.|__|||||||_ | | | | ______GUAG_AAUG__GU__GUCAUAA_ | | (miRNA) | 3' | _____A____U________CC_______U | 5' |
|
| | |
| |
| |