DIANA TOOLS - MicroT-CDS

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Results: 1148 targets for miRNAs hsa-miR-133a-3p

. Threshold is set to 0.7.

Name:	hsa-miR-133a-3p
Alternative description:	MIMAT0000427
Related names:
miRNA sequence:	uuugguccccuucaaccagcug
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Bites and Stings Brain Neoplasms Breast Neoplasms Carcinoma, Embryonal Carcinoma, Renal Cell Carcinoma, Squamous Cell Cardiomegaly Cell Transformation, Neoplastic Colonic Neoplasms Colorectal Neoplasms Dermatitis, Atopic Diabetes Mellitus, Experimental Diabetes Mellitus, Type 2 Disease Models, Animal Disease Progression Endodermal Sinus Tumor Facial Neoplasms Genetic Predisposition to Disease Germinoma Glioblastoma Head and Neck Neoplasms Hematologic Neoplasms Huntington Disease Hyperglycemia Hyperinsulinism Hypothyroidism Kidney Neoplasms Long QT Syndrome Lung Neoplasms Lupus Nephritis Marek Disease Mouth Neoplasms Myocardial Infarction Myocardial Reperfusion Injury Neoplasm Invasiveness Neoplasm Metastasis Neoplasms Neoplasms, Germ Cell and Embryonal Nerve Sheath Neoplasms Neuralgia Neuroblastoma Oligodendroglioma Ovarian Neoplasms Parkinson Disease Polycythemia Vera Poultry Diseases Prostatic Neoplasms Psoriasis Pulmonary Embolism Retinitis Pigmentosa Seminoma Stomach Neoplasms Teratoma Testicular Neoplasms Thrombocythemia, Essential Tongue Neoplasms Urinary Bladder Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000164023 (SGMS2)

hsa-miR-133a-3p

0.999999972143804

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

18-33

0.00915417809284388

Position on chromosome:

4:108831728-108831743

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAACAAAGGCAU_____CUUAC____________	3'
		_____________CAGCU___________ACCAAA
		_____________\|\|\|\|\|___________\|\|\|\|\|\|
		_____________GUCGA___________UGGUUU
(miRNA)	3'	__________________CCAACUUCCCC______	5'

UTR3

6mer

42-54

0.012136139382902

Position on chromosome:

4:108831752-108831764

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACACCAAAAGAGUUAA______UA______________	3'
		________________C_GCUG__________ACCAAA
		________________\|_\|\|\|\|__________\|\|\|\|\|\|
		________________G_CGAC__________UGGUUU
(miRNA)	3'	_________________U____CAACUUCCCC______	5'

UTR3

8mer

89-113

0.266042763581742

Position on chromosome:

4:108831799-108831823

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CUGA_____AAA_____AAAU________	3'
		____CUGGU___UGAAG____GGACCAAA
		____\|\|\|\|\|___\|\|\|\|\|____\|\|\|\|\|\|\|\|
		____GACCA___ACUUC____CCUGGUUU
(miRNA)	3'	___C_____________C___________	5'

UTR3

6mer

303-308

0.00521254718344737

Position on chromosome:

4:108832013-108832018

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUCCUUUCUUUAUUCUUUCUCC______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

3231-3245

0.0024829405810111

Position on chromosome:

4:108834941-108834955

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUAUGUUUUGUUUA_________AC________	3'
		______________CU__UUGAA____ACCAAA
		______________\|\|__\|\|\|\|\|____\|\|\|\|\|\|
		______________GA__AACUU____UGGUUU
(miRNA)	3'	_____________C__CC_____CCCC______	5'

ENSG00000101489 (CELF4)

hsa-miR-133a-3p

0.999999144968976

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

113-131

0.134630163862736

Position on chromosome:

18:34824690-34824708

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	GUCAUUCCUU_____AUUUA____________	3'
		__________UAGCU________GGGACCAAA
		__________.\|\|\|\|________\|\|\|\|\|\|\|\|\|
		__________GUCGA________CCCUGGUUU
(miRNA)	3'	_______________CCAACUUC_________	5'

UTR3

8mer

105-131

0.104435361458284

Position on chromosome:

18:34824682-34824708

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,xenTro2

Binding area:

(Transcript)	5'	UU_____A___U____ACCAAA________	3'
		__UAGCU__UU_AGGG______GGACCAAA
		__.\|\|\|\|__\|\|_\|.\|\|______\|\|\|\|\|\|\|\|
		__GUCGA__AA_UUCC______CCUGGUUU
(miRNA)	3'	_______CC__C__________________	5'

ENSG00000166783 (KIAA0430)

hsa-miR-133a-3p

0.999998973812978

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2040-2045

0.010101502539618

Position on chromosome:

16:15690283-15690288

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUAAAGAAUCCUUAAUAUAUUUU______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1806-1829

0.00194444288851809

Position on chromosome:

16:15690049-15690072

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCGC___C___U__GUUCACAC______	3'
		_____UAG_CUG_GU________ACCAAA
		_____.\|\|_\|\|\|_\|\|________\|\|\|\|\|\|
		_____GUC_GAC_CA________UGGUUU
(miRNA)	3'	_______________ACUUCCCC______	5'

UTR3

6mer

163-176

0.00820877782059151

Position on chromosome:

16:15688406-15688419

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	UUAAAAAAAUGACAA___UUAUC______	3'
		_______________AAG_____ACCAAA
		_______________\|\|\|_____\|\|\|\|\|\|
		_______________UUC_____UGGUUU
(miRNA)	3'	______________C___CCC________	5'

UTR3

9mer

34-57

0.215828558963786

Position on chromosome:

16:15688277-15688300

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CAAGU____UUUUG__UGUU_________	3'
		_____GCUG_____UG____GGGACCAAA
		_____\|\|\|\|_____\|\|____\|\|\|\|\|\|\|\|\|
		_____CGAC_____AC____CCCUGGUUU
(miRNA)	3'	____U____CA_____UUC__________	5'

ENSG00000161021 (MAML1)

hsa-miR-133a-3p

0.99996744123332

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

66-85

0.13115517848035

Position on chromosome:

5:179201945-179201964

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CAAAGAAAG___AACUACUUU_________	3'
		_________AGC__________GGACCAAA
		_________\|\|\|__________\|\|\|\|\|\|\|\|
		_________UCG__________CCUGGUUU
(miRNA)	3'	________G___ACCAACUUCC________	5'

UTR3

7mer

258-284

0.0436976884855533

Position on chromosome:

5:179202137-179202163

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AA__G_____UUCUAUCCAAAC_______	3'
		__AG_UGGUU____________GACCAAA
		__\|\|_\|\|\|\|\|____________\|\|\|\|\|\|\|
		__UC_ACCAA____________CUGGUUU
(miRNA)	3'	_G__G_____CUUCCC_____________	5'

UTR3

6mer

2329-2343

0.0133758507757632

Position on chromosome:

5:179204208-179204222

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UACUGCCCUUAACU_____AUAC__________	3'
		______________CUGGU________ACCAAA
		______________\|\|\|\|\|________\|\|\|\|\|\|
		______________GACCA________UGGUUU
(miRNA)	3'	_____________C_____ACUUCCCC______	5'

UTR3

7mer

1866-1889

0.0129851426350142

Position on chromosome:

5:179195986-179196009

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GAAG____AUCA____CUUUU_______C	3'
		____CAGC____GUUG_____GGACCAA_
		____\|\|\|\|____\|\|\|\|_____\|\|\|\|\|\|\|_
		____GUCG____CAAC_____CCUGGUU_
(miRNA)	3'	________AC______UUCC________U	5'

ENSG00000124789 (NUP153)

hsa-miR-133a-3p

0.999916708033451

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

165-183

0.164225727567137

Position on chromosome:

6:17615434-17615452

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUUUCUGAUC__________UUU_________	3'
		__________CAGUU__UUG____GGACCAAA
		__________\|\|\|.\|__\|\|\|____\|\|\|\|\|\|\|\|
		__________GUCGA__AAC____CCUGGUUU
(miRNA)	3'	_______________CC___UUCC________	5'

ENSG00000122870 (BICC1)

hsa-miR-133a-3p

0.999911119759672

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

91-115

0.125807794856553

Position on chromosome:

10:60588743-60588767

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CACU____G__UCU__UAUCA________	3'
		____CUGG_UG___GG_____GGACCAAA
		____\|\|\|\|_\|\|___\|\|_____\|\|\|\|\|\|\|\|
		____GACC_AC___CC_____CCUGGUUU
(miRNA)	3'	___C____A__UU________________	5'

UTR3

6mer

186-197

0.00853812055181535

Position on chromosome:

10:60588838-60588849

Conserved species:

panTro2,rheMac2,rn4,mm9,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUCUUAUGAUGUCAUA___AAC________________	3'
		_________________CAG_____________ACCAAA
		_________________\|\|\|_____________\|\|\|\|\|\|
		_________________GUC_____________UGGUUU
(miRNA)	3'	____________________GACCAACUUCCCC______	5'

UTR3

7mer

677-698

0.0141480419527694

Position on chromosome:

10:60589329-60589350

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAAGUG___CCAC___CUUCU_______U	3'
		______AGU____UUG_____GGACCAA_
		______\|\|.____\|\|\|_____\|\|\|\|\|\|\|_
		______UCG____AAC_____CCUGGUU_
(miRNA)	3'	_____G___ACC____UUCC________U	5'

UTR3

7mer

753-779

0.0146703396150264

Position on chromosome:

10:60589405-60589431

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	CA____AAUA___GCA___AAA_______	3'
		__CAGU____GGU___AAG___GACCAAA
		__\|\|\|.____\|\|\|___\|\|\|___\|\|\|\|\|\|\|
		__GUCG____CCA___UUC___CUGGUUU
(miRNA)	3'	______A______AC____CC________	5'

ENSG00000100345 (MYH9)

hsa-miR-133a-3p

0.999846761214246

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1156-1172

0.010228117223545

Position on chromosome:

22:36678483-36678499

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CCCUCCCCUGCU___AAUC____U__________	3'
		____________CAG_____UGA_____ACCAAA
		____________\|\|\|_____\|\|\|_____\|\|\|\|\|\|
		____________GUC_____ACU_____UGGUUU
(miRNA)	3'	_______________GACCA___UCCCC______	5'

UTR3

9mer

592-608

0.144032454884191

Position on chromosome:

22:36677919-36677935

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GGCUUCUCCCAA_____CUU______________	3'
		____________CA_CU_______GGGGACCAAA
		____________\|\|_\|\|_______\|\|\|\|\|\|\|\|\|\|
		____________GU_GA_______CCCCUGGUUU
(miRNA)	3'	______________C__CCAACUU__________	5'

ENSG00000205129 (C4orf47)

hsa-miR-133a-3p

0.999836551723405

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

420-431

0.153206233633892

Position on chromosome:

4:186366231-186366242

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AAGAUUUUCCACCCACC___U________	3'
		_________________AAG_GGACCAAA
		_________________\|\|\|_\|\|\|\|\|\|\|\|
		_________________UUC_CCUGGUUU
(miRNA)	3'	________________C___C________	5'

ENSG00000101844 (ATG4A)

hsa-miR-133a-3p

0.999827702058998

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

579-603

0.144638418239548

Position on chromosome:

X:107377596-107377620

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	AAAU__A____A____U__UUU________	3'
		____CA_UUGG__GAA_GG___GGACCAAA
		____\|\|_.\|\|\|__\|\|\|_\|\|___\|\|\|\|\|\|\|\|
		____GU_GACC__CUU_CC___CCUGGUUU
(miRNA)	3'	______C____AA_________________	5'

UTR3

6mer

845-863

0.0048394603388306

Position on chromosome:

X:107381174-107381192

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	UGUGCCCCUU__C____GCAUAA_________	3'
		__________CG_CUGG_________ACCAAA
		__________\|._\|\|\|\|_________\|\|\|\|\|\|
		__________GU_GACC_________UGGUUU
(miRNA)	3'	____________C____AACUUCCCC______	5'

UTR3

6mer

918-942

0.00286641672594774

Position on chromosome:

X:107381368-107381392

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2

Binding area:

(Transcript)	5'	UCUU___G___CAUU___A__AAA______	3'
		____UAG__GG____AGG_GG___ACCAAA
		____.\|\|__\|\|____\|\|\|_\|\|___\|\|\|\|\|\|
		____GUC__CC____UCC_CC___UGGUUU
(miRNA)	3'	_______GA__AACU_______________	5'

ENSG00000106803 (SEC61B)

hsa-miR-133a-3p

0.999823260304606

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

55-62

0.15192822325626

Position on chromosome:

9:101992762-101992769

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,fr2,danRer6

Binding area:

(Transcript)	5'	GGAAAAAACCCAACAUUUCUU________	3'
		_____________________GGACCAAA
		_____________________\|\|\|\|\|\|\|\|
		_____________________CCUGGUUU
(miRNA)	3'	____________________C________	5'

ENSG00000141279 (NPEPPS)

hsa-miR-133a-3p

0.999758163395496

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

188-213

0.142142834489646

Position on chromosome:

17:45673764-45673789

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,danRer6

Binding area:

(Transcript)	5'	UAG______U_A____UACCU________	3'
		___CAGCUG_G_UGAA_____GGACCAAA
		___\|\|\|\|\|\|_\|_\|\|\|\|_____\|\|\|\|\|\|\|\|
		___GUCGAC_C_ACUU_____CCUGGUUU
(miRNA)	3'	___________A____CC___________	5'

UTR3

6mer

420-447

0.00465911838348572

Position on chromosome:

17:45679077-45679104

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	____UU____AAAUGUCAAACCA______U	3'
		_GGU__UGAA_____________GACCAA_
		_\|\|\|__\|\|\|\|_____________\|\|\|\|\|\|_
		_CCA__ACUU_____________CUGGUU_
(miRNA)	3'	A_________CCC________________U	5'

ENSG00000066117 (SMARCD1)

hsa-miR-133a-3p

0.999710470306411

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

873-896

0.00252731247259565

Position on chromosome:

12:50493657-50493680

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUUAA_____AAAC___CCUAAA______	3'
		_____UGGAG____GGG______ACCAAA
		_____\|\|.\|\|____\|\|\|______\|\|\|\|\|\|
		_____ACUUC____CCC______UGGUUU
(miRNA)	3'	____A________________________	5'

UTR3

8mer

1556-1581

0.14133202244089

Position on chromosome:

12:50494340-50494365

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	UAA___AA___UUUUUUUCAU________	3'
		___CUG__UUG__________GGACCAAA
		___\|\|\|__\|\|\|__________\|\|\|\|\|\|\|\|
		___GAC__AAC__________CCUGGUUU
(miRNA)	3'	__C___C____UUCC______________	5'

ENSG00000134109 (EDEM1)

hsa-miR-133a-3p

0.999657414268144

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

29-46

0.0102458063013914

Position on chromosome:

3:5257633-5257650

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCAUCUUGAAC___ACCUUAAC___________	3'
		___________CAG____________GACCAAA
		___________\|\|\|____________\|\|\|\|\|\|\|
		___________GUC____________CUGGUUU
(miRNA)	3'	______________GACCAACUUCCC_______	5'

UTR3

6mer

3185-3190

0.00247317415467662

Position on chromosome:

3:5260789-5260794

Conserved species:

panTro2,rheMac2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	UCCUCCCCUUUCCCCUUCUCCCC______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

8mer

3927-3946

0.130923264180744

Position on chromosome:

3:5261531-5261550

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAGGGAU__UU___UAAAA________	3'
		_________CU__UUG_____GGACCAAA
		_________\|\|__\|\|\|_____\|\|\|\|\|\|\|\|
		_________GA__AAC_____CCUGGUUU
(miRNA)	3'	________C__CC___UUCC_________	5'

UTR3

7mer

1798-1821

0.00593193446563809

Position on chromosome:

3:5255122-5255145

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUUCU___AAGAG_____GCA________	3'
		_____CUG_____GGAGG___GGACCAAG
		_____\|\|\|_____\|.\|\|\|___\|\|\|\|\|\|\|.
		_____GAC_____CUUCC___CCUGGUUU
(miRNA)	3'	____C___CAA__________________	5'

ENSG00000058673 (ZC3H11A)

hsa-miR-133a-3p

0.999637464513134

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

908-931

0.140182967127076

Position on chromosome:

1:203821942-203821965

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAAGA______CUACCAUUAA________	3'
		_____CAGCUG__________GGACCAAA
		_____\|\|\|\|\|\|__________\|\|\|\|\|\|\|\|
		_____GUCGAC__________CCUGGUUU
(miRNA)	3'	___________CAACUUCC__________	5'

ENSG00000123728 (RAP2C)

hsa-miR-133a-3p

0.999541256196502

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1156-1176

0.0037249348600572

Position on chromosome:

X:131338209-131338229

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGUAACUG_____CACCUACUGC_______	3'
		________CAGCU___________ACCAAA
		________\|\|\|\|\|___________\|\|\|\|\|\|
		________GUCGA___________UGGUUU
(miRNA)	3'	_____________CCAACUUCCCC______	5'

UTR3

6mer

1087-1092

0.00172672363648046

Position on chromosome:

X:131338140-131338145

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	GCUUCUAAAUAAAAUAAAACAAA______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

707-727

0.00428221182941619

Position on chromosome:

X:131337760-131337780

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUAAUUUA____UGCACUUUAAU______	3'
		________AGUU___________ACCAAA
		________\|\|.\|___________\|\|\|\|\|\|
		________UCGA___________UGGUUU
(miRNA)	3'	_______G____CCAACUUCCCC______	5'

UTR3

6mer

695-700

0.00385621937897095

Position on chromosome:

X:131337748-131337753

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	UGCACUUUAAUACCAAACUUAAA______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

9mer

353-379

0.122744436578581

Position on chromosome:

X:131337406-131337432

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UC____ACAUUUU___AAAA_________	3'
		__CAGC_______AAG____GGGACCAAA
		__\|\|\|\|_______\|\|\|____\|\|\|\|\|\|\|\|\|
		__GUCG_______UUC____CCCUGGUUU
(miRNA)	3'	______ACCAAC_________________	5'

ENSG00000090905 (TNRC6A)

hsa-miR-133a-3p

0.999538837500868

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

867-885

0.11901800185948

Position on chromosome:

16:24801306-24801324

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AAUAUUACCA___AAA___CU_________	3'
		__________CUG___UGA___GGACCAAA
		__________\|\|\|___\|\|\|___\|\|\|\|\|\|\|\|
		__________GAC___ACU___CCUGGUUU
(miRNA)	3'	_________C___CA____UCC________	5'

UTR3

6mer

898-921

0.00575792783141036

Position on chromosome:

16:24801337-24801360

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	ACUAA__UUA___CCUCU__UUU______	3'
		_____CU___UGA_____AG___ACCAAA
		_____\|\|___\|\|\|_____\|\|___\|\|\|\|\|\|
		_____GA___ACU_____UC___UGGUUU
(miRNA)	3'	____C__CCA__________CCC______	5'

UTR3

6mer

3651-3678

0.00383885400279884

Position on chromosome:

16:24816930-24816957

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	C_____UCAUU_C_____UAU_C______	3'
		_CAGUU_____G_UGAAG___G_ACCAAA
		_\|\|\|.\|_____\|_\|\|\|\|\|___\|_\|\|\|\|\|\|
		_GUCGA_____C_ACUUC___C_UGGUUU
(miRNA)	3'	______C_____A_____C___C______	5'

UTR3

6mer

7636-7656

0.00763375704518605

Position on chromosome:

16:24837351-24837371

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CUUCCAUA______UUUCCAAAA______	3'
		________CUGGUU_________ACCAAA
		________\|\|\|\|\|\|_________\|\|\|\|\|\|
		________GACCAA_________UGGUUU
(miRNA)	3'	_______C______CUUCCCC________	5'

ENSG00000157103 (SLC6A1)

hsa-miR-133a-3p

0.999508140660848

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1780-1795

0.00326095583409262

Position on chromosome:

3:11080433-11080448

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUGUUCUUCAAUG____ACU_A_______	3'
		_____________UGAA___G_GACCAAG
		_____________\|\|\|\|___\|_\|\|\|\|\|\|.
		_____________ACUU___C_CUGGUUU
(miRNA)	3'	____________A____CC__________	5'

UTR3

8mer

2139-2155

0.131933841135456

Position on chromosome:

3:11080792-11080808

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UAGUAAAAUUAU___UUCUAU__________	3'
		____________CUG________GGACCAAA
		____________\|\|\|________\|\|\|\|\|\|\|\|
		____________GAC________CCUGGUUU
(miRNA)	3'	___________C___CAACUUCC________	5'

ENSG00000113575 (PPP2CA)

hsa-miR-133a-3p

0.999436610635613

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3308-3328

0.12934518186667

Position on chromosome:

5:133533333-133533353

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	UCAAAAAA__U___UUCACAU________	3'
		________CU_GUU_______GGACCAAA
		________\|\|_\|\|\|_______\|\|\|\|\|\|\|\|
		________GA_CAA_______CCUGGUUU
(miRNA)	3'	_______C__C___CUUCC__________	5'

UTR3

6mer

2172-2185

0.00194692872513797

Position on chromosome:

5:133532197-133532210

Conserved species:

panTro2,rheMac2,canFam2,echTel1

Binding area:

(Transcript)	5'	GUUCUUUGAGUGAUA__AG_______________	3'
		_______________CU___UGAA____ACCAAA
		_______________\|\|___\|\|\|\|____\|\|\|\|\|\|
		_______________GA___ACUU____UGGUUU
(miRNA)	3'	______________C__CCA____CCCC______	5'

UTR3

6mer

1575-1602

0.00168236460600371

Position on chromosome:

5:133531600-133531627

Conserved species:

panTro2

Binding area:

(Transcript)	5'	C___UC________UAUC__AAUU_______	3'
		_CGG__CUG__UGA____AG____GACCAAG
		_\|.\|__\|\|\|__\|\|\|____\|\|____\|\|\|\|\|\|.
		_GUC__GAC__ACU____UC____CUGGUUU
(miRNA)	3'	_________CA_________CC_________	5'

ENSG00000131127 (ZNF141)

hsa-miR-133a-3p

0.999251288966634

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

415-420

0.0145058610262052

Position on chromosome:

4:377415-377420

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAACGUGAACUUCCUACAUCUAA______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

8mer

587-608

0.113817656032959

Position on chromosome:

4:377587-377608

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUCAAC________UU__CCAA________	3'
		_______CU__UUGA__AG____GGACCAAA
		_______\|\|__\|\|\|\|__\|\|____\|\|\|\|\|\|\|\|
		_______GA__AACU__UC____CCUGGUUU
(miRNA)	3'	______C__CC________C___________	5'

ENSG00000143952 (VPS54)

hsa-miR-133a-3p

0.999223773732103

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1009-1033

0.121610481325313

Position on chromosome:

2:64120289-64120313

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GAAA___A__CA____UCUUU________	3'
		____CAG_CU__GGUU_____GGACCAAA
		____\|\|\|_\|\|__\|\|\|\|_____\|\|\|\|\|\|\|\|
		____GUC_GA__CCAA_____CCUGGUUU
(miRNA)	3'	________________CUUCC________	5'

UTR3

6mer

723-736

0.00612271693486699

Position on chromosome:

2:64120003-64120016

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GGAAUUCAAUUUUU___UC__U_______U	3'
		______________GUU__AG__GACCAA_
		______________\|\|\|__\|\|__\|\|\|\|\|\|_
		______________CAA__UC__CUGGUU_
(miRNA)	3'	_____________C___CU__CC______U	5'

ENSG00000119844 (AFTPH)

hsa-miR-133a-3p

0.999156089122128

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

650-674

0.126365690595812

Position on chromosome:

2:64819820-64819844

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,fr2

Binding area:

(Transcript)	5'	AAAU____A__AUUCA___AA________	3'
		____CAGU_UG_____GAG__GGACCAAA
		____\|\|\|._\|\|_____\|\|.__\|\|\|\|\|\|\|\|
		____GUCG_AC_____CUU__CCUGGUUU
(miRNA)	3'	___________CAA_____CC________	5'

ENSG00000115464 (USP34)

hsa-miR-133a-3p

0.999030652942876

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

738-762

0.124098762451361

Position on chromosome:

2:61597646-61597670

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AAUG_________CAUAUAUUU________	3'
		____UGG_UGGAG_________GGACCAAA
		____\|\|\|_\|\|.\|\|_________\|\|\|\|\|\|\|\|
		____ACC_ACUUC_________CCUGGUUU
(miRNA)	3'	___G___A_____C________________	5'

ENSG00000084731 (KIF3C)

hsa-miR-133a-3p

0.999009441939137

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2567-2590

0.0128145213870381

Position on chromosome:

2:26152271-26152294

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CUUUG__A___AAUUCUCUCAC_______	3'
		_____AG_UGG___________GACCAAG
		_____\|\|_\|\|\|___________\|\|\|\|\|\|.
		_____UC_ACC___________CUGGUUU
(miRNA)	3'	____G__G___AACUUCCC__________	5'

UTR3

7mer

1684-1706

0.0033306909541493

Position on chromosome:

2:26151155-26151177

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCACC____A____AACU_U________	3'
		______UUGG_UGGG____G_GGACCAAG
		______.\|\|\|_\|\|..____\|_\|\|\|\|\|\|\|.
		______GACC_ACUU____C_CCUGGUUU
(miRNA)	3'	_____C____A____C_____________	5'

UTR3

8mer

262-286

0.107599425647254

Position on chromosome:

2:26149733-26149757

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	ACAA___AAG__CC____UUA________	3'
		____AGU___GG__UUGA___GGACCAAA
		____\|\|.___\|\|__\|\|\|\|___\|\|\|\|\|\|\|\|
		____UCG___CC__AACU___CCUGGUUU
(miRNA)	3'	___G___A__________UCC________	5'

ENSG00000081154 (PCNP)

hsa-miR-133a-3p

0.998796641103972

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

198-210

0.0945798296259449

Position on chromosome:

3:101311485-101311497

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGGGAUACACCAACAU______________________	3'
		________________CAGCU_________GGACCAAA
		________________\|\|\|\|\|_________\|\|\|\|\|\|\|\|
		________________GUCGA_________CCUGGUUU
(miRNA)	3'	_____________________CCAACUUCC________	5'

UTR3

6mer

282-302

0.0101741967679875

Position on chromosome:

3:101311569-101311589

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUCUCAUC____AAA__UCCAU_______	3'
		________UUGG___UG_____GACCAAG
		________.\|\|\|___\|\|_____\|\|\|\|\|\|.
		________GACC___AC_____CUGGUUU
(miRNA)	3'	_______C____A____UUCCC_______	5'

UTR3

6mer

991-996

0.00452430328246741

Position on chromosome:

3:101312278-101312283

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCUUCAAAGAAAAACCAUUUGCU______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1119-1124

0.00452583758658822

Position on chromosome:

3:101312406-101312411

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUCUUUUAAAACACAAACCACC______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

1174-1190

0.00352557033783556

Position on chromosome:

3:101312461-101312477

Conserved species:

panTro2,rn4,oryCun2,bosTau4,canFam2,monDom5,galGal3

Binding area:

(Transcript)	5'	UUUAUUUUUUAA____UAUAAAC______	3'
		____________AAGG_______ACCAAA
		____________\|\|\|\|_______\|\|\|\|\|\|
		____________UUCC_______UGGUUU
(miRNA)	3'	___________C____CC___________	5'

UTR3

6mer

1343-1360

0.00323082831792854

Position on chromosome:

3:101312630-101312647

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	UUAUUUUAAA__C__ACAUAUU______U	3'
		__________UG_GU_______GACCAA_
		__________\|\|_\|\|_______\|\|\|\|\|\|_
		__________AC_CA_______CUGGUU_
(miRNA)	3'	_________G_____ACUUCCC______U	5'

ENSG00000008197 (TFAP2D)

hsa-miR-133a-3p

0.998758315403972

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

66-94

0.123634556859778

Position on chromosome:

6:50740644-50740672

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	_______UGACUAAUCUUCAGU________	3'
		_UGAGGG_______________GGACCAAA
		_\|\|\|.\|\|_______________\|\|\|\|\|\|\|\|
		_ACUUCC_______________CCUGGUUU
(miRNA)	3'	A_____________________________	5'

UTR3

7mer

1009-1025

0.0112126911269278

Position on chromosome:

6:50712946-50712962

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAAGAAAAAAGA___UCCU__C_______	3'
		____________UGA____GG_GACCAAA
		____________\|\|\|____\|\|_\|\|\|\|\|\|\|
		____________ACU____CC_CUGGUUU
(miRNA)	3'	___________A___U_____C_______	5'

ENSG00000066044 (ELAVL1)

hsa-miR-133a-3p

0.998507137494455

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4708-4713

0.0123720265251399

Position on chromosome:

19:8028171-8028176

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,xenTro2

Binding area:

(Transcript)	5'	UGUUUGAAAUCCCACAAUGUUA______U	3'
		______________________GACCAA_
		______________________\|\|\|\|\|\|_
		______________________CUGGUU_
(miRNA)	3'	_____________________C______U	5'

UTR3

8mer

4224-4248

0.100179361103402

Position on chromosome:

19:8027687-8027711

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,danRer6

Binding area:

(Transcript)	5'	AGCC___GCACCAA___GAAU___________	3'
		____CAG_______UGG_______GGACCAAA
		____\|\|\|_______\|\|\|_______\|\|\|\|\|\|\|\|
		____GUC_______ACC_______CCUGGUUU
(miRNA)	3'	_______G_________AACUUCC________	5'

UTR3

6mer

3859-3877

0.00272362026503098

Position on chromosome:

19:8027322-8027340

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UACUUCUUGC_____AUCUAUUA_________	3'
		__________CAGUU___________ACCAAA
		__________\|\|\|.\|___________\|\|\|\|\|\|
		__________GUCGA___________UGGUUU
(miRNA)	3'	_______________CCAACUUCCCC______	5'

UTR3

6mer

2081-2100

0.001757412610542

Position on chromosome:

19:8025544-8025563

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AUCAAAAAU______U_____AAAU______	3'
		_________CUGGUU___GGG____ACCAAA
		_________\|\|\|\|\|\|___\|\|\|____\|\|\|\|\|\|
		_________GACCAA___CCC____UGGUUU
(miRNA)	3'	________C______CUU___C_________	5'

ENSG00000143458 (GABPB2)

hsa-miR-133a-3p

0.998388942679862

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

193-220

0.107830355943723

Position on chromosome:

1:151090926-151090953

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	C______GCCAAAAGAAUAAA________	3'
		_UGAGGG______________GGACCAAA
		_\|\|\|.\|\|______________\|\|\|\|\|\|\|\|
		_ACUUCC______________CCUGGUUU
(miRNA)	3'	A____________________________	5'

UTR3

6mer

1743-1768

0.00155411079681104

Position on chromosome:

1:151092476-151092501

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GC___GA_UUCCA__CC__CCU______C	3'
		__CAG__G_____GA__AG___GACCAA_
		__\|\|\|__\|_____\|\|__\|\|___\|\|\|\|\|\|_
		__GUC__C_____CU__UC___CUGGUU_
(miRNA)	3'	_____GA_CAA________CC_______U	5'

UTR3

6mer

2288-2312

0.00246147905321611

Position on chromosome:

1:151093021-151093045

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UAUG___GA____UAUAUAUAAA______	3'
		____UGG__GGAG__________ACCAAA
		____\|\|\|__\|.\|\|__________\|\|\|\|\|\|
		____ACC__CUUC__________UGGUUU
(miRNA)	3'	___G___AA____CCC_____________	5'

UTR3

6mer

3865-3870

0.00195701070619186

Position on chromosome:

1:151094598-151094603

Conserved species:

panTro2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AGACUGAAAAUUUAACUCCCCAA______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

5014-5039

0.00198219767713637

Position on chromosome:

1:151095747-151095772

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CGA_______CAAAACCC__UCUCU_______	3'
		___CA__UGG________UG______ACCAAA
		___\|\|__\|\|\|________\|\|______\|\|\|\|\|\|
		___GU__ACC________AC______UGGUUU
(miRNA)	3'	_____CG___A_________UUCCCC______	5'

ENSG00000106536 (POU6F2)

hsa-miR-133a-3p

0.998214652771762

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

308-327

0.0108657718585553

Position on chromosome:

7:39504594-39504613

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GUUUUUUAA___ACUUA___CAA______	3'
		_________UGG_____AAG___ACCAAA
		_________\|\|\|_____\|\|\|___\|\|\|\|\|\|
		_________ACC_____UUC___UGGUUU
(miRNA)	3'	________G___AAC_____CCC______	5'

UTR3

6mer

400-405

0.00524874746737735

Position on chromosome:

7:39504686-39504691

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GGAAAAAGAAAAAAAAAAACUAA______	3'
		_______________________ACCAAA
		_______________________\|\|\|\|\|\|
		_______________________UGGUUU
(miRNA)	3'	______________________C______	5'

UTR3

6mer

511-528

0.0079375610401458

Position on chromosome:

7:39504797-39504814

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2

Binding area:

(Transcript)	5'	CUGAUUCACUA____ACCUAUUA______	3'
		___________UGAA________ACCAAA
		___________\|\|\|\|________\|\|\|\|\|\|
		___________ACUU________UGGUUU
(miRNA)	3'	__________A____CCCC__________	5'

UTR3

7mer

1090-1116

0.00955658003310296

Position on chromosome:

7:39505376-39505402

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UU___CAC__ACA_____AGCU_______	3'
		__GGC___GU___UGGAG____GACCAAA
		__.\|\|___\|\|___\|\|.\|\|____\|\|\|\|\|\|\|
		__UCG___CA___ACUUC____CUGGUUU
(miRNA)	3'	_G___AC___________CC_________	5'

UTR3

6mer

1502-1524

0.00205260736084769

Position on chromosome:

7:39505788-39505810

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAGGA____________AAGCUUUC______	3'
		______AGUU___UGAAG________ACCAAA
		______\|\|.\|___\|\|\|\|\|________\|\|\|\|\|\|
		______UCGA___ACUUC________UGGUUU
(miRNA)	3'	_____G____CCA_____CCC___________	5'

UTR3

6mer

3122-3134

0.00873450740425899

Position on chromosome:

7:39507408-39507420

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	UGUAUCAAAGAACUCA____AUA______________	3'
		________________AGCU___________ACCAAA
		________________\|\|\|\|___________\|\|\|\|\|\|
		________________UCGA___________UGGUUU
(miRNA)	3'	_______________G____CCAACUUCCCC______	5'

UTR3

8mer

3156-3180

0.0454636835720361

Position on chromosome:

7:39507442-39507466

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	CUUU___C___UCUCUACGCU________	3'
		____GCU_GUU__________GGACCAAA
		____\|\|\|_\|\|\|__________\|\|\|\|\|\|\|\|
		____CGA_CAA__________CCUGGUUU
(miRNA)	3'	___U___C___CUUCC_____________	5'

UTR3

6mer

3328-3342

0.0049148629068429

Position on chromosome:

7:39507614-39507628

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	ACUCUACUUGUACC_____AAU______________	3'
		______________CAGUU__________GACCAAG
		______________\|\|\|.\|__________\|\|\|\|\|\|.
		______________GUCGA__________CUGGUUU
(miRNA)	3'	___________________CCAACUUCCC_______	5'

UTR3

6mer

3666-3692

0.00928546731720581

Position on chromosome:

7:39507952-39507978

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GA_____ACA___U__ACUU_U_______	3'
		__AGUUG___UGA_AG____G_GACCAAG
		__\|\|.\|\|___\|\|\|_\|\|____\|_\|\|\|\|\|\|.
		__UCGAC___ACU_UC____C_CUGGUUU
(miRNA)	3'	_G_____CA_______C____________	5'

UTR3

6mer

3729-3745

0.0100436246727141

Position on chromosome:

7:39508015-39508031

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,danRer6

Binding area:

(Transcript)	5'	UCCUUACUUGCU___ACA_______________	3'
		____________CUG___UUGAA____ACCAAA
		____________\|\|\|___\|\|\|\|\|____\|\|\|\|\|\|
		____________GAC___AACUU____UGGUUU
(miRNA)	3'	___________C___C_______CCCC______	5'

ENSG00000170836 (PPM1D)

hsa-miR-133a-3p

0.998057252173705

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

332-348

0.113208093880204

Position on chromosome:

17:58740610-58740626

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	UAAUUCAACAAA______UCAU____________	3'
		____________CA_CUG________GGACCAAA
		____________\|\|_\|\|\|________\|\|\|\|\|\|\|\|
		____________GU_GAC________CCUGGUUU
(miRNA)	3'	______________C___CAACUUCC________	5'

UTR3

6mer

1367-1372

0.00390077433280696

Position on chromosome:

17:58741645-58741650

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAUUCCCUUCUUUUUCAUCCCA______U	3'
		______________________GACCAA_
		______________________\|\|\|\|\|\|_
		______________________CUGGUU_
(miRNA)	3'	_____________________C______U	5'

UTR3

7mer

989-996

0.0154036660048462

Position on chromosome:

17:58725416-58725423

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AGAUGCCAUCUCAAUGUGCCA________	3'
		_____________________GGACCAAG
		_____________________\|\|\|\|\|\|\|.
		_____________________CCUGGUUU
(miRNA)	3'	____________________C________	5'

ENSG00000065308 (TRAM2)

hsa-miR-133a-3p

0.997867585320796

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4876-4903

0.00465538725538886

Position on chromosome:

6:52367076-52367103

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	U____CAUUCAC___CAUUCAAA______	3'
		_CAGC_______AAG________ACCAAA
		_\|\|\|\|_______\|\|\|________\|\|\|\|\|\|
		_GUCG_______UUC________UGGUUU
(miRNA)	3'	_____ACCAAC____CCC___________	5'

UTR3

6mer

4871-4891

0.00187005113475914

Position on chromosome:

6:52367071-52367091

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CAUUCACA___AUUCAAAACCAA______	3'
		________AGC____________ACCAAA
		________\|\|\|____________\|\|\|\|\|\|
		________UCG____________UGGUUU
(miRNA)	3'	_______G___ACCAACUUCCCC______	5'

UTR3

6mer

4029-4042

0.00166559804688757

Position on chromosome:

6:52366229-52366242

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	AUCUUUCUGACAUCA____A_________________	3'
		_______________CAGU_____GAA____ACCAAA
		_______________\|\|\|._____\|\|\|____\|\|\|\|\|\|
		_______________GUCG_____CUU____UGGUUU
(miRNA)	3'	___________________ACCAA___CCCC______	5'

UTR3

7mer

2632-2652

0.00307022551435098

Position on chromosome:

6:52364832-52364852

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGAGAGGG__G___CGCU___U________	3'
		________AG_UGG_____GG_GGACCAAG
		________\|\|_\|\|\|_____\|\|_\|\|\|\|\|\|\|.
		________UC_ACC_____CC_CCUGGUUU
(miRNA)	3'	_______G__G___AACUU___________	5'

UTR3

8mer

240-261

0.0999330950324851

Position on chromosome:

6:52362440-52362461

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCUACUC____CU___CAUAU________	3'
		_______UAGC__GUU_____GGACCAAA
		_______.\|\|\|__\|\|\|_____\|\|\|\|\|\|\|\|
		_______GUCG__CAA_____CCUGGUUU
(miRNA)	3'	___________AC___CUUCC________	5'