DIANA TOOLS - MicroT-CDS

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Results: 705 targets for miRNAs hsa-miR-1294

. Threshold is set to 0.7.

Name:	hsa-miR-1294
Alternative description:	MIMAT0005884
Related names:
miRNA sequence:	ugugagguuggcauuguugucu
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000188211 (NCR3LG1)

hsa-miR-1294

0.999995277926534

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

537-557

0.163589948460784

Position on chromosome:

11:17394597-17394617

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCUCCUGU___GU_____UAU________	3'
		________UAG__AUGUU___ACCUCACA
		________.\|.__\|\|\|..___\|\|\|\|\|\|\|\|
		________GUU__UACGG___UGGAGUGU
(miRNA)	3'	_______U___GU_____U__________	5'

UTR3

6mer

950-969

0.00696721839249596

Position on chromosome:

11:17395010-17395029

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGGUCACUG__UC_____A____________	3'
		_________AG____CAG_GCCAGUCUCACA
		_________\|\|____\|\|._\|\|\|\|..\|\|\|\|\|\|
		_________UC____GUU_CGGUUGGAGUGU
(miRNA)	3'	___________UGUU___A____________	5'

UTR3

7mer

2563-2588

0.0147498392382425

Position on chromosome:

11:17396623-17396648

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCU___G_____CC____UAU________	3'
		___GGG_AAUAA__UGUU___GCCUCACA
		___.\|._\|\|.\|\|__\|\|..___.\|\|\|\|\|\|\|
		___UCU_UUGUU__ACGG___UGGAGUGU
(miRNA)	3'	______G___________U__________	5'

UTR3

6mer

2960-2976

0.00219887121839583

Position on chromosome:

11:17397020-17397036

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUCAAUCAGUUG___U___C___________	3'
		____________AGC_GAU_CC__UCUCACA
		____________\|.\|_.\|\|_\|\|__.\|\|\|\|\|\|
		____________UUG_UUA_GG__GGAGUGU
(miRNA)	3'	___________G_______C__UU_______	5'

UTR3

6mer

3071-3089

0.0029881908775541

Position on chromosome:

11:17397131-17397149

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAUCUGAA___AAAG_____A_UU______C	3'
		_________AGG_______GC_C__CCUCAC_
		_________\|\|._______\|\|_\|__\|\|\|\|\|\|_
		_________UCU_______CG_G__GGAGUG_
(miRNA)	3'	____________GUUGUUA____UU______U	5'

UTR3

6mer

3783-3800

0.00400499678373967

Position on chromosome:

11:17397843-17397860

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAUACUAAUU__UUA______U__________U	3'
		__________AG___AAUAAU_____CCUCAC_
		__________\|\|___\|\|.\|\|\|_____\|\|\|\|\|\|_
		__________UC___UUGUUA_____GGAGUG_
(miRNA)	3'	____________UG_______CGGUU______U	5'

UTR3

7mer

4183-4196

0.0166367846177686

Position on chromosome:

11:17398243-17398256

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAACACUUUCCCCAA______________________	3'
		_______________AGAUA________AGCCUCACA
		_______________\|\|\|.\|________\|.\|\|\|\|\|\|\|
		_______________UCUGU________UUGGAGUGU
(miRNA)	3'	____________________UGUUACGG_________	5'

ENSG00000196104 (SPOCK3)

hsa-miR-1294

0.999641049113078

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1429-1454

0.140345432139597

Position on chromosome:

4:167655964-167655989

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCA______AA___AUUCUA_________	3'
		___AUAACA__AUG______AACCUCACA
		___\|.\|\|\|\|__\|\|\|______\|\|\|\|\|\|\|\|\|
		___UGUUGU__UAC______UUGGAGUGU
(miRNA)	3'	__C___________GG_____________	5'

ENSG00000113615 (SEC24A)

hsa-miR-1294

0.999640820771759

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

366-389

0.1512016021593

Position on chromosome:

5:134061151-134061174

Conserved species:

panTro2,rheMac2,rn4,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCUUU___UGCU___UUUAA_________	3'
		_____GGC____ACA_____AACCUCACA
		_____\|.\|____\|\|\|_____\|\|\|\|\|\|\|\|\|
		_____CUG____UGU_____UUGGAGUGU
(miRNA)	3'	____U___U______UACGG_________	5'

UTR3

6mer

1774-1796

0.00385211065552116

Position on chromosome:

5:134062559-134062581

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUAG_______CU____UUGU_______U	3'
		_____GGAUAAU__U_CC____GCCUCAC_
		_____.\|\|.\|\|.__\|_\|\|____.\|\|\|\|\|\|_
		_____UCUGUUG__A_GG____UGGAGUG_
(miRNA)	3'	____________UU_C__U__________U	5'

UTR3

7mer

418-442

0.0151167452239749

Position on chromosome:

5:133997130-133997154

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAAU_____UAUCCAUCCA__________	3'
		____AUAAC__________CAGCCUCACA
		____\|.\|\|\|__________\|\|.\|\|\|\|\|\|\|
		____UGUUG__________GUUGGAGUGU
(miRNA)	3'	___C_____UUACG_______________	5'

UTR3

9mer

1413-1434

0.0150241605638608

Position on chromosome:

5:134018095-134018116

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUGACC___GUU__UG__G____________	3'
		_______AGA___UA__GA____AACCUCACA
		_______\|\|\|___.\|__.\|____\|\|\|\|\|\|\|\|\|
		_______UCU___GU__UU____UUGGAGUGU
(miRNA)	3'	_______________UG__ACGG_________	5'

ENSG00000173812 (EIF1)

hsa-miR-1294

0.999548745956664

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

72-91

0.128759862135786

Position on chromosome:

17:39847151-39847170

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCCCUUGUC____GUUUAAA_________	3'
		_________ACAG_______AACCUCACA
		_________\|\|\|._______\|\|\|\|\|\|\|\|\|
		_________UGUU_______UUGGAGUGU
(miRNA)	3'	________U____ACGG____________	5'

UTR3

7mer

1687-1703

0.00784383127274325

Position on chromosome:

17:39848766-39848782

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGAUGCUUCAUU___________________	3'
		____________CAACAAUG__AGCCUCACA
		____________\|\|\|\|\|\|\|\|__\|.\|\|\|\|\|\|\|
		____________GUUGUUAC__UUGGAGUGU
(miRNA)	3'	___________U________GG_________	5'

ENSG00000136997 (MYC)

hsa-miR-1294

0.999048088356897

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

70-92

0.125687175791578

Position on chromosome:

8:128753275-128753297

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UCAAAU___UG_UCAA______________	3'
		______GCA__A____AUG_CAACCUCACA
		______.\|\|__\|____\|\|\|_\|\|\|\|\|\|\|\|\|\|
		______UGU__U____UAC_GUUGGAGUGU
(miRNA)	3'	_____C___UG________G__________	5'

UTR3

7mer

899-921

0.0039027857775021

Position on chromosome:

8:128752739-128752761

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGCUGG____C____CAAA__U________	3'
		______AGGC_ACAG____CC__CCUCACA
		______\|\|.\|_\|\|\|.____\|\|__\|\|\|\|\|\|\|
		______UCUG_UGUU____GG__GGAGUGU
(miRNA)	3'	__________U____AC____UU_______	5'

ENSG00000196542 (SPTSSB)

hsa-miR-1294

0.998930332863331

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1068-1093

0.122487567590282

Position on chromosome:

3:161063648-161063673

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CGG_____AU______A_UUU________	3'
		___AGAUA__ACAGUG_C___ACCUCACA
		___\|\|\|.\|__\|\|\|.\|\|_\|___\|\|\|\|\|\|\|\|
		___UCUGU__UGUUAC_G___UGGAGUGU
(miRNA)	3'	________________G_U__________	5'

ENSG00000177125 (ZBTB34)

hsa-miR-1294

0.998659793496684

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

4655-4678

0.121240997682604

Position on chromosome:

9:129647849-129647872

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUCUU______UAAAC__G__________	3'
		_____GCAAUA_____UG_UAACCUCACA
		_____.\|\|\|.\|_____\|\|_.\|\|\|\|\|\|\|\|\|
		_____UGUUGU_____AC_GUUGGAGUGU
(miRNA)	3'	____C______U______G__________	5'

UTR3

7mer

870-883

0.00795572058028298

Position on chromosome:

9:129642549-129642562

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCAUACUCCUAUUCC___G____________	3'
		_______________CAA___CAGCCUCACA
		_______________\|\|\|___\|\|.\|\|\|\|\|\|\|
		_______________GUU___GUUGGAGUGU
(miRNA)	3'	______________U___ACG__________	5'

ENSG00000106460 (TMEM106B)

hsa-miR-1294

0.998287060676489

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3897-3918

0.00162042892824777

Position on chromosome:

7:12275499-12275520

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UGUCAUU___UC_____UU_U_G______	3'
		_______AGG__ACGAU__U_A_CUCACA
		_______\|\|.__\|\|.\|\|__._\|_\|\|\|\|\|\|
		_______UCU__UGUUA__G_U_GAGUGU
(miRNA)	3'	__________GU_____CG_U_G______	5'

UTR3

6mer

5712-5733

0.00081843297304908

Position on chromosome:

7:12277314-12277335

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AAAAAAU____UGU_____AGU_G______	3'
		_______AGGC____GUGC___G_CUCACA
		_______\|\|.\|____.\|\|\|___._\|\|\|\|\|\|
		_______UCUG____UACG___U_GAGUGU
(miRNA)	3'	___________UUGU____GU__G______	5'

UTR3

9mer

11244-11266

0.112342411484775

Position on chromosome:

7:12282846-12282868

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUAUAU___UACU_________________	3'
		______GAC____AUAA_GUCAACCUCACA
		______\|\|\|____\|.\|\|_\|.\|\|\|\|\|\|\|\|\|\|
		______CUG____UGUU_CGGUUGGAGUGU
(miRNA)	3'	_____U___U_______A____________	5'

ENSG00000135535 (CD164)

hsa-miR-1294

0.997777293640041

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

620-643

0.0763741640826074

Position on chromosome:

6:109688339-109688362

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UUCUU___G__AG______GUUU________	3'
		_____GGG_AA____GUCG____ACCUCACA
		_____.\|._\|\|____\|.\|.____\|\|\|\|\|\|\|\|
		_____UCU_UU____CGGU____UGGAGUGU
(miRNA)	3'	________G__GUUA________________	5'

UTR3

8mer

582-602

0.0387345100473781

Position on chromosome:

6:109688301-109688321

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	UCCAUUAG_____UU____GGU________	3'
		________UAAUA___CUA___ACCUCACA
		________.\|\|.\|___\|.\|___\|\|\|\|\|\|\|\|
		________GUUGU___GGU___UGGAGUGU
(miRNA)	3'	_______U_____UAC______________	5'

UTR3

9mer

133-157

0.0167523055166456

Position on chromosome:

6:109690187-109690211

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	ACAA______CU___ACU___________	3'
		____AUAACA__GUG___CCAACCUCACA
		____\|.\|\|\|\|__.\|\|___\|\|\|\|\|\|\|\|\|\|\|
		____UGUUGU__UAC___GGUUGGAGUGU
(miRNA)	3'	___C_________________________	5'

ENSG00000158417 (EIF5B)

hsa-miR-1294

0.997051962699391

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1759-1777

0.10588743824538

Position on chromosome:

2:100017637-100017655

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACUAUCAUGC__UU___AAAU________	3'
		__________AC__UGC____ACCUCACA
		__________\|\|__\|\|\|____\|\|\|\|\|\|\|\|
		__________UG__ACG____UGGAGUGU
(miRNA)	3'	_________U__UU___GU__________	5'

ENSG00000196693 (ZNF33B)

hsa-miR-1294

0.996516283000863

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

3265-3290

0.0341984123333691

Position on chromosome:

10:43087820-43087845

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GAU__U_____CUG__AUAA_________	3'
		___GG_UAAUA___GC____AACCUCACA
		___.\|_.\|\|.\|___\|\|____\|\|\|\|\|\|\|\|\|
		___UC_GUUGU___CG____UUGGAGUGU
(miRNA)	3'	_____U_____UA___G____________	5'

UTR3

9mer

3012-3038

0.0817689636314835

Position on chromosome:

10:43087567-43087593

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UA___AG_______UAAAA__________	3'
		__AGA__UAAUAAU_____UAACCUCACA
		__\|\|\|__.\|\|.\|\|\|_____.\|\|\|\|\|\|\|\|\|
		__UCU__GUUGUUA_____GUUGGAGUGU
(miRNA)	3'	______________CG_____________	5'

UTR3

8mer

1219-1237

0.0227724973117027

Position on chromosome:

10:43089280-43089298

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAACUUUCU__G__AA_____A________U	3'
		_________GG_AG____GUC_AACCUCAC_
		_________\|._\|.____\|.\|_\|\|\|\|\|\|\|\|_
		_________CU_UU____CGG_UUGGAGUG_
(miRNA)	3'	________U__G__GUUA____________U	5'

UTR3

7mer

1134-1154

0.00383107080684716

Position on chromosome:

10:43089195-43089215

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAGCCUUU__C____________C_______	3'
		________AG_C_AUAA_GUCAG_CCUCACA
		________\|\|_\|_\|.\|\|_\|.\|\|._\|\|\|\|\|\|\|
		________UC_G_UGUU_CGGUU_GGAGUGU
(miRNA)	3'	__________U_U____A_____________	5'

UTR3

7mer

1051-1067

0.0057448551357647

Position on chromosome:

10:43089112-43089128

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAACUUUUUAC___A______________U	3'
		___________CAG_AAU_CUGACCUCAC_
		___________\|\|._\|\|\|_\|..\|\|\|\|\|\|\|_
		___________GUU_UUA_GGUUGGAGUG_
(miRNA)	3'	__________U___G___C__________U	5'

UTR3

8mer

714-726

0.013623885603502

Position on chromosome:

10:43088775-43088787

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAACCUUCUGCUUGAA___A_________	3'
		________________GUC_GACCUCACA
		________________\|.\|_.\|\|\|\|\|\|\|\|
		________________CGG_UUGGAGUGU
(miRNA)	3'	_______________A_____________	5'

ENSG00000180694 (TMEM64)

hsa-miR-1294

0.995371405875106

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1397-1418

0.00193200907813851

Position on chromosome:

8:91635620-91635641

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GGUUGCU____UUU___GU___A_________	3'
		_______GGGU___UAA__UGC____CUCACA
		_______.\|..___.\|\|__\|\|\|____\|\|\|\|\|\|
		_______UCUG___GUU__ACG____GAGUGU
(miRNA)	3'	___________UU_________GUUG______	5'

UTR3

9mer

203-223

0.0965548804996622

Position on chromosome:

8:91634426-91634446

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UAAAACUC___AGUU___A____________	3'
		________AGG____CAA___UAACCUCACA
		________\|\|.____\|\|\|___.\|\|\|\|\|\|\|\|\|
		________UCU____GUU___GUUGGAGUGU
(miRNA)	3'	___________GUU____ACG__________	5'

ENSG00000180667 (YOD1)

hsa-miR-1294

0.994802660643899

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

5133-5147

0.0861348133397763

Position on chromosome:

1:207222327-207222341

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,xenTro2

Binding area:

(Transcript)	5'	GAAUGAGGGUUGAA___UACU________	3'
		______________GCC____ACCUCACA
		______________\|\|\|____\|\|\|\|\|\|\|\|
		______________CGG____UGGAGUGU
(miRNA)	3'	_____________A___U___________	5'

UTR3

7mer

2572-2593

0.00727395985124019

Position on chromosome:

1:207219766-207219787

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	AUUCUAA__U________UUUA_________	3'
		_______AC__CAA_GCU____AGCCUCACA
		_______\|\|__\|\|\|_\|\|.____\|.\|\|\|\|\|\|\|
		_______UG__GUU_CGG____UUGGAGUGU
(miRNA)	3'	______C__UU___A________________	5'

UTR3

7mer

2296-2313

0.00317461485295717

Position on chromosome:

1:207219490-207219507

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUAGUGGCAA__UG_____A___________U	3'
		__________AG__AAUAA____GACCUCAC_
		__________\|\|__\|\|.\|\|____.\|\|\|\|\|\|\|_
		__________UC__UUGUU____UUGGAGUG_
(miRNA)	3'	____________UG_____ACGG________U	5'

ENSG00000241852 (C8orf58)

hsa-miR-1294

0.993564436859539

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

201-226

0.00299086904833548

Position on chromosome:

8:22461021-22461046

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CC_____U_______GGCUCUUCCU______C	3'
		__GCAGC____CCAG__________CCUCAC_
		__.\|\|.\|____\|\|\|.__________\|\|\|\|\|\|_
		__UGUUG____GGUU__________GGAGUG_
(miRNA)	3'	_C_____UUAC____________________U	5'

UTR3

8mer

763-791

0.090079583329215

Position on chromosome:

8:22461583-22461611

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	____________UGCCCUAUCU________	3'
		_AUAAUGAUGCC__________ACCUCACA
		_\|.\|\|..\|\|\|\|\|__________\|\|\|\|\|\|\|\|
		_UGUUGUUACGG__________UGGAGUGU
(miRNA)	3'	C___________U_________________	5'

ENSG00000196597 (ZNF782)

hsa-miR-1294

0.993539834311714

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1397-1424

0.0738883908015343

Position on chromosome:

9:99580151-99580178

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	A___UC__AGCUGGAAA__A_________	3'
		_AAC__UG_________UC_AACCUCACA
		_\|\|\|__\|\|_________.\|_\|\|\|\|\|\|\|\|\|
		_UUG__AC_________GG_UUGGAGUGU
(miRNA)	3'	G___UU_______________________	5'

UTR3

7mer

470-493

0.019119294619102

Position on chromosome:

9:99579224-99579247

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUACU_____AAACUCAA___C_______	3'
		_____GACAG________CAA_CCUCACA
		_____\|\|\|\|.________\|\|\|_\|\|\|\|\|\|\|
		_____CUGUU________GUU_GGAGUGU
(miRNA)	3'	____U_____GUUACG_____________	5'

ENSG00000197565 (COL4A6)

hsa-miR-1294

0.993520189749287

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1348-1364

0.0112859911917301

Position on chromosome:

X:107400185-107400201

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	CUGCCCCUUGCC_UC_CC_____________	3'
		____________C__C__UGCC__CCUCACA
		____________\|__\|__\|\|\|\|__\|\|\|\|\|\|\|
		____________G__G__ACGG__GGAGUGU
(miRNA)	3'	___________U_UU_UU____UU_______	5'

UTR3

8mer

1334-1350

0.0782466196365895

Position on chromosome:

X:107400171-107400187

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CCCCUGCCCCUC____________________	3'
		____________ACAACA__GUC_ACCUCACA
		____________\|\|\|\|\|\|__\|.\|_\|\|\|\|\|\|\|\|
		____________UGUUGU__CGG_UGGAGUGU
(miRNA)	3'	___________C______UA___U________	5'

UTR3

6mer

908-931

0.00342512692039617

Position on chromosome:

X:107399745-107399768

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	CUCA__U_UGC____A__AAGU______U	3'
		____AG_C___ACAG_GC____CCUCAC_
		____\|\|_\|___\|\|\|._\|\|____\|\|\|\|\|\|_
		____UC_G___UGUU_CG____GGAGUG_
(miRNA)	3'	______U_U______A__GUU_______U	5'

ENSG00000047597 (XK)

hsa-miR-1294

0.992474051493452

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

929-948

0.00352671702776468

Position on chromosome:

X:37588645-37588664

Conserved species:

panTro2,rn4,mm9,oryCun2

Binding area:

(Transcript)	5'	UUAUUUCA_________A___UU______U	3'
		________AGG_AAUAG_GUU__CCUCAC_
		________\|\|._\|\|.\|._\|..__\|\|\|\|\|\|_
		________UCU_UUGUU_CGG__GGAGUG_
(miRNA)	3'	___________G_____A___UU______U	5'

UTR3

8mer

3000-3010

0.0869676746692996

Position on chromosome:

X:37590716-37590726

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CAUAAUACCCUUUUCCAA__U________	3'
		__________________CC_ACCUCACA
		__________________\|\|_\|\|\|\|\|\|\|\|
		__________________GG_UGGAGUGU
(miRNA)	3'	_________________C__U________	5'

ENSG00000171431 (KRT20)

hsa-miR-1294

0.991676033962266

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

61-86

0.0888340691401041

Position on chromosome:

17:39032254-39032279

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAU___UUU____UA_ACUA_________	3'
		___ACA___CAAU__U____AACCUCACA
		___\|\|\|___\|\|\|\|__.____\|\|\|\|\|\|\|\|\|
		___UGU___GUUA__G____UUGGAGUGU
(miRNA)	3'	__C___U______CG______________	5'

ENSG00000151365 (THRSP)

hsa-miR-1294

0.991153898438657

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

429-450

0.0888151896215257

Position on chromosome:

11:77779115-77779136

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	AAAAUGG________UUA__U________	3'
		_______GGAUAAUA___UC_ACCUCACA
		_______.\|\|.\|\|.\|___.\|_\|\|\|\|\|\|\|\|
		_______UCUGUUGU___GG_UGGAGUGU
(miRNA)	3'	_______________UAC__U________	5'

UTR3

7mer

364-382

0.00738441841447263

Position on chromosome:

11:77775292-77775310

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCCUCCAUC___UCCUC_____________C	3'
		_________ACA_____AUGC__ACCUCAC_
		_________\|\|\|_____\|\|\|\|__\|\|\|\|\|\|\|_
		_________UGU_____UACG__UGGAGUG_
(miRNA)	3'	________C___UGU______GU_______U	5'

ENSG00000188997 (KCTD21)

hsa-miR-1294

0.990176934138763

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

130-155

0.0108267912252568

Position on chromosome:

11:77882425-77882450

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GU___UUUAU_________CUC_______U	3'
		__GAC_____GCAA_GUCA___ACCUCAC_
		__\|\|\|_____.\|\|\|_\|.\|\|___\|\|\|\|\|\|\|_
		__CUG_____UGUU_CGGU___UGGAGUG_
(miRNA)	3'	_U___U________A______________U	5'

UTR3

8mer

62-81

0.0765635929983002

Position on chromosome:

11:77882357-77882376

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CAGUAAUAC_____CC_A__U________	3'
		_________AUAAC__U_CC_ACCUCACA
		_________\|.\|\|\|__\|_\|\|_\|\|\|\|\|\|\|\|
		_________UGUUG__A_GG_UGGAGUGU
(miRNA)	3'	________C_____UU_C__U________	5'

UTR3

8mer

731-752

0.0102488723722143

Position on chromosome:

11:77885549-77885570

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUCGGG___A___UCUAUA_________U	3'
		______GGG_AGC______CAACCUCAC_
		______.\|._\|.\|______\|\|\|\|\|\|\|\|\|_
		______UCU_UUG______GUUGGAGUG_
(miRNA)	3'	_________G___UUACG__________U	5'

ENSG00000179476 (C14orf28)

hsa-miR-1294

0.990111747214609

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

419-444

0.0161709068045498

Position on chromosome:

14:45375173-45375198

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	CU___UG__UUUCUU____CU_______U	3'
		__GAC__UA______UGCC__ACCUCAC_
		__\|\|\|__.\|______\|\|\|\|__\|\|\|\|\|\|\|_
		__CUG__GU______ACGG__UGGAGUG_
(miRNA)	3'	_U___UU__U_________U________U	5'

UTR3

6mer

1291-1318

0.00458146025491884

Position on chromosome:

14:45376045-45376072

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	G__UG__A__UUAC__AGAAU________	3'
		_GG__AA_CA____UG_____GCCUCACG
		_.\|__\|\|_\|\|____\|\|_____.\|\|\|\|\|\|.
		_UC__UU_GU____AC_____UGGAGUGU
(miRNA)	3'	___UG_____U_____GGU__________	5'

UTR3

8mer

1594-1616

0.0652413311625517

Position on chromosome:

14:45376348-45376370

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UCAUGA_______ACUUA__U________	3'
		______AACAAUG_____CC_ACCUCACA
		______\|\|\|\|\|\|\|_____\|\|_\|\|\|\|\|\|\|\|
		______UUGUUAC_____GG_UGGAGUGU
(miRNA)	3'	_____G______________U________	5'

ENSG00000139218 (SCAF11)

hsa-miR-1294

0.989696815265026

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

842-862

0.0853150198939242

Position on chromosome:

12:46349359-46349379

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	UUUAAAAU_UG___UUUUAA_________	3'
		________G__AAC______AACCUCACA
		________\|__\|\|\|______\|\|\|\|\|\|\|\|\|
		________C__UUG______UUGGAGUGU
(miRNA)	3'	_______U_UG___UUACGG_________	5'

ENSG00000151233 (GXYLT1)

hsa-miR-1294

0.989389048759041

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

5541-5555

0.05727180404729

Position on chromosome:

12:42481188-42481202

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAUAAUUUUAUGU__________________U	3'
		_____________CAGCA___CUAACCUCAC_
		_____________\|\|.\|\|___\|.\|\|\|\|\|\|\|\|_
		_____________GUUGU___GGUUGGAGUG_
(miRNA)	3'	____________U_____UAC__________U	5'

UTR3

9mer

2711-2738

0.0246048599024189

Position on chromosome:

12:42478358-42478385

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	U____U______ACCCUUCA_________	3'
		_ACAA_CAGUGU________AACCUCACA
		_\|\|\|\|_\|\|.\|\|.________\|\|\|\|\|\|\|\|\|
		_UGUU_GUUACG________UUGGAGUGU
(miRNA)	3'	C___________G________________	5'

UTR3

7mer

2304-2316

0.00295221205764487

Position on chromosome:

12:42477951-42477963

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAUUUACUUUUUGAGU___AGC_______	3'
		________________UGU___CCUCACA
		________________\|\|.___\|\|\|\|\|\|\|
		________________ACG___GGAGUGU
(miRNA)	3'	_______________U___GUU_______	5'

ENSG00000169855 (ROBO1)

hsa-miR-1294

0.989231517420594

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1257-1276

0.0869415612611062

Position on chromosome:

3:78647647-78647666

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AAUAUAGAA__UU____U_____________	3'
		_________AG__GAUA___UCAACCUCACA
		_________\|\|__.\|.\|___.\|\|\|\|\|\|\|\|\|\|
		_________UC__UUGU___GGUUGGAGUGU
(miRNA)	3'	___________UG____UAC___________	5'

UTR3

8mer

3714-3730

0.0105208455922068

Position on chromosome:

3:78734996-78735012

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUCAGUCUCCC___________G__________	3'
		____________AGAC_____UG_CGACCUCACA
		____________\|\|\|\|_____\|\|_\|.\|\|\|\|\|\|\|\|
		____________UCUG_____AC_GUUGGAGUGU
(miRNA)	3'	________________UUGUU__G__________	5'

UTR3

8mer

1936-1954

0.00860086668367868

Position on chromosome:

3:78688911-78688929

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCAAUGGAA_______CAG_________U	3'
		_________ACAGCGA___CAACCUCAC_
		_________\|\|\|.\|.\|___\|\|\|\|\|\|\|\|\|_
		_________UGUUGUU___GUUGGAGUG_
(miRNA)	3'	________C_______ACG_________U	5'

ENSG00000204604 (ZNF468)

hsa-miR-1294

0.989073897523838

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3149-3169

0.00506705496909834

Position on chromosome:

19:53344938-53344958

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUAAUUCC_UC__UUCU___UUA______	3'
		________C__CA____UCA___CUCACA
		________\|__\|\|____.\|\|___\|\|\|\|\|\|
		________G__GU____GGU___GAGUGU
(miRNA)	3'	_______U_UU__UAC____UG_______	5'

UTR3

9mer

1165-1191

0.0202231959803425

Position on chromosome:

19:53342954-53342980

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GA____UCAU____GAGAGA_________	3'
		__GGAU____ACAG______AACCUCACA
		__.\|\|.____\|\|\|.______\|\|\|\|\|\|\|\|\|
		__UCUG____UGUU______UUGGAGUGU
(miRNA)	3'	______U_______ACGG___________	5'

UTR3

8mer

248-270

0.0590550627045054

Position on chromosome:

19:53342037-53342059

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUAU____UU__AG__ACA________U	3'
		_____AGAU__CA__GU___AACCUCAC_
		_____\|\|\|.__\|\|__\|.___\|\|\|\|\|\|\|\|_
		_____UCUG__GU__CG___UUGGAGUG_
(miRNA)	3'	_________UU__UA__G__________U	5'

ENSG00000064692 (SNCAIP)

hsa-miR-1294

0.988930133712887

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

115-143

0.0705398024230211

Position on chromosome:

5:121776396-121776424

Conserved species:

panTro2,rheMac2,mm9,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	______________UUCACGUA________	3'
		_GGCAACAGUGCCG________GCCUCACA
		_\|.\|\|\|\|\|.\|\|\|\|.________.\|\|\|\|\|\|\|
		_CUGUUGUUACGGU________UGGAGUGU
(miRNA)	3'	U_____________________________	5'

UTR3

6mer

429-445

0.00319179333480514

Position on chromosome:

5:121785630;121786228-121785632;121786241

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	CCUUCUUCACC____UCA___U______C	3'
		___________CAGU___CCA_CCUCAC_
		___________\|\|.\|___\|\|\|_\|\|\|\|\|\|_
		___________GUUA___GGU_GGAGUG_
(miRNA)	3'	__________U____C_____U______U	5'

UTR3

7mer

1417-1435

0.00474690055996387

Position on chromosome:

5:121787213-121787231

Conserved species:

panTro2,rheMac2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAAACCUCU___U____CUU________U	3'
		_________ACA_UGCC___GACCUCAC_
		_________\|\|\|_\|\|\|\|___.\|\|\|\|\|\|\|_
		_________UGU_ACGG___UUGGAGUG_
(miRNA)	3'	________U___U_______________U	5'

UTR3

6mer

1730-1755

0.00565079311864412

Position on chromosome:

5:121799344-121799369

Conserved species:

panTro2,rheMac2,bosTau4,echTel1

Binding area:

(Transcript)	5'	AA___G___C___AAAA__AU_______C	3'
		__AGA_AAC_AUG____CA__GCCUCAC_
		__\|\|\|_\|\|\|_\|\|\|____\|\|__.\|\|\|\|\|\|_
		__UCU_UUG_UAC____GU__UGGAGUG_
(miRNA)	3'	_____G___U___G______________U	5'

ENSG00000010270 (STARD3NL)

hsa-miR-1294

0.987345832816591

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

15-33

0.0174601198465935

Position on chromosome:

7:38268471;38269524-38268472;38269540

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACUUUUGUUA_____G__AAAC_______	3'
		__________AAUGU_AA____CCUCACA
		__________\|\|\|\|._\|\|____\|\|\|\|\|\|\|
		__________UUACG_UU____GGAGUGU
(miRNA)	3'	_________G_____G_____________	5'

UTR3

8mer

135-160

0.0644567996617624

Position on chromosome:

7:38269642-38269667

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAA____UUAUU__U___AAU________	3'
		___AGAU_____UA_UGU___ACCUCACA
		___\|\|\|._____.\|_\|\|.___\|\|\|\|\|\|\|\|
		___UCUG_____GU_ACG___UGGAGUGU
(miRNA)	3'	_______UU_____U___GU_________	5'

ENSG00000089234 (BRAP)

hsa-miR-1294

0.986752860233421

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1819-1845

0.0820447920349048

Position on chromosome:

12:112081769-112081795

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AA___UCU___G___UCA___________	3'
		__AGG___UAA_AGU___CUAACCUCACA
		__\|\|.___.\|\|_\|.\|___\|.\|\|\|\|\|\|\|\|\|
		__UCU___GUU_UUA___GGUUGGAGUGU
(miRNA)	3'	___________G___C_____________	5'

UTR3

7mer

939-961

0.00913856437618479

Position on chromosome:

12:112103499-112103521

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGGACG__U_U_UG____G__U_______	3'
		______AG_C_G__AAUG_CA_CCUCACA
		______\|\|_\|_.__\|\|\|\|_\|\|_\|\|\|\|\|\|\|
		______UC_G_U__UUAC_GU_GGAGUGU
(miRNA)	3'	________U___UG____G__U_______	5'

ENSG00000189180 (ZNF33A)

hsa-miR-1294

0.986467826119297

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

370-394

0.0859159256073088

Position on chromosome:

10:38345859-38345883

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACAA__________UAAAA__________	3'
		____AGGUAAUAAU_____UAACCUCACA
		____\|\|..\|\|.\|\|\|_____.\|\|\|\|\|\|\|\|\|
		____UCUGUUGUUA_____GUUGGAGUGU
(miRNA)	3'	______________CG_____________	5'

UTR3

8mer

1100-1117

0.0266884605802856

Position on chromosome:

10:38344153-38344170

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAGCUUUCUG_____________A________U	3'
		__________GGAUAA____GUC_AACCUCAC_
		__________.\|\|.\|\|____\|.\|_\|\|\|\|\|\|\|\|_
		__________UCUGUU____CGG_UUGGAGUG_
(miRNA)	3'	________________GUUA____________U	5'

UTR3

7mer

1182-1202

0.00369332459369003

Position on chromosome:

10:38344235-38344255

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAGCCUUU__C____________C_______	3'
		________AG_C_AUAA_GUCAG_CCUCACA
		________\|\|_\|_\|.\|\|_\|.\|\|._\|\|\|\|\|\|\|
		________UC_G_UGUU_CGGUU_GGAGUGU
(miRNA)	3'	__________U_U____A_____________	5'

UTR3

7mer

1259-1285

0.00519306771566313

Position on chromosome:

10:38344312-38344338

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	A___UUUU_____GAAAUCUG_______U	3'
		_AAC____UGCCA________ACCUCAC_
		_\|\|\|____\|\|\|\|\|________\|\|\|\|\|\|\|_
		_UUG____ACGGU________UGGAGUG_
(miRNA)	3'	G___UU______________________U	5'

UTR3

8mer

1610-1622

0.00783263044327456

Position on chromosome:

10:38344663-38344675

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAACCUUCUGCUUGAA___A_________	3'
		________________GUC_GACCUCACA
		________________\|.\|_.\|\|\|\|\|\|\|\|
		________________CGG_UUGGAGUGU
(miRNA)	3'	_______________A_____________	5'

ENSG00000136021 (SCYL2)

hsa-miR-1294

0.98618697927035

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2431-2450

0.080465585072895

Position on chromosome:

12:100735382-100735401

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUUCUUUU___C_______AAAAU________	3'
		_________GAC_____UGU_____ACCUCACA
		_________\|\|\|_____\|\|._____\|\|\|\|\|\|\|\|
		_________CUG_____ACG_____UGGAGUGU
(miRNA)	3'	________U___UUGUU___GU___________	5'