DIANA TOOLS - MicroT-CDS

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Results: 22 targets for miRNAs hsa-miR-126-3p

. Threshold is set to 0.7.

Name:	hsa-miR-126-3p
Alternative description:	MIMAT0000445
Related names:
miRNA sequence:	ucguaccgugaguaauaaugcg
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Adenocarcinoma Arsenic Poisoning Asthma Bites and Stings Bone Neoplasms Brain Neoplasms Breast Neoplasms Breast Neoplasms, Male Bronchial Hyperreactivity Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Pancreatic Ductal Carcinoma, Renal Cell Carcinoma, Squamous Cell Cardiomegaly Cell Transformation, Neoplastic Chronic Periodontitis Colitis, Ulcerative Colonic Neoplasms Colorectal Neoplasms Diabetes Mellitus Diabetes Mellitus, Type 2 Diabetic Nephropathies Disease Models, Animal Endometriosis Esophageal Neoplasms Facial Neoplasms Fatty Liver Glioblastoma Hematologic Neoplasms Hepatitis B, Chronic Hepatitis C, Chronic Huntington Disease Hyperglycemia Hyperinsulinism Hypertension Inflammation Influenza in Birds Ischemia Kidney Neoplasms Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myelogenous, Chronic, BCR-ABL Positive Leukemia, Myeloid, Acute Leukemia, Promyelocytic, Acute Liver Neoplasms Lung Neoplasms Medulloblastoma Mouth Neoplasms Multiple Sclerosis Myocardial Infarction Myocardial Reperfusion Injury Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Nerve Sheath Neoplasms Neuralgia Ovarian Neoplasms Pancreatic Neoplasms Pancreatitis, Chronic Polycystic Kidney Diseases Poultry Diseases Prostatic Neoplasms Pulmonary Embolism Recurrence Respiratory Hypersensitivity Stroke Translocation, Genetic Urinary Bladder Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000169410 (PTPN9)

hsa-miR-126-3p

0.982425786221653

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

598-611

0.0764671653931133

Position on chromosome:

15:75760060-75760073

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GCAGCCAGAGCCAAA____AU________________	3'
		_______________UGCA__________CGGUACGA
		_______________.\|\|\|__________\|\|\|\|\|\|\|\|
		_______________GCGU__________GCCAUGCU
(miRNA)	3'	___________________AAUAAUGAGU________	5'

ENSG00000196576 (PLXNB2)

hsa-miR-126-3p

0.915130749003669

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

262-270

0.0495709566296245

Position on chromosome:

22:50713670-50713678

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	AGAUGGGAGGAGGAGAAAAA_________	3'
		____________________GCGGUACGA
		____________________.\|\|\|\|\|\|\|\|
		____________________UGCCAUGCU
(miRNA)	3'	___________________G_________	5'

ENSG00000267260 (CTD-2162K18.4)

hsa-miR-126-3p

0.900046601012492

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

84-106

0.0466255704633427

Position on chromosome:

19:37266500-37266522

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACUUCA__G__GGGAAA___G_________	3'
		______CG_AU______ACU_A_GGUACGA
		______\|\|_\|\|______\|\|\|_\|_\|\|\|\|\|\|\|
		______GC_UA______UGA_U_CCAUGCU
(miRNA)	3'	________G__AUAA_____G_G_______	5'

ENSG00000091409 (ITGA6)

hsa-miR-126-3p

0.883819974359521

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

37-50

0.0438694899596386

Position on chromosome:

2:173368834-173368847

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGUGGAUUCUUUAAA___U________A_________	3'
		_______________CGC_______CU___GGUACGA
		_______________\|\|\|_______\|\|___\|\|\|\|\|\|\|
		_______________GCG_______GA___CCAUGCU
(miRNA)	3'	__________________UAAUAAU__GUG_______	5'

ENSG00000197256 (KANK2)

hsa-miR-126-3p

0.883020854146736

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1031-1047

0.00270175669015993

Position on chromosome:

19:11275974-11275990

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CGGCUCCCAAAA__CC____UGU______	3'
		____________AC__CAUG___GUACGA
		____________\|\|__\|\|.\|___\|\|\|\|\|\|
		____________UG__GUGC___CAUGCU
(miRNA)	3'	___________A__A______________	5'

UTR3

8mer

100-109

0.0410409153260669

Position on chromosome:

19:11275043-11275052

Conserved species:

panTro2,rheMac2,rn4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUAAUUUCACUUUCUGA__________U	3'
		__________________UCACGGUACG_
		__________________\|\|\|\|\|\|\|\|\|\|_
		__________________AGUGCCAUGC_
(miRNA)	3'	_________________G__________U	5'

ENSG00000172000 (ZNF556)

hsa-miR-126-3p

0.874569909792251

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

201-228

0.0424454615568399

Position on chromosome:

19:2877372-2877399

Conserved species:

panTro2

Binding area:

(Transcript)	5'	A_____UG____AGUGUAAG_________	3'
		_AUUGU__UACU________ACGGUACGA
		_\|\|\|.\|__\|\|\|\|________\|\|\|\|\|\|\|\|\|
		_UAAUA__AUGA________UGCCAUGCU
(miRNA)	3'	G___________G________________	5'

ENSG00000165804 (ZNF219)

hsa-miR-126-3p

0.845038145530488

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

90-106

0.0384284308654673

Position on chromosome:

14:21558295-21558311

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CCCUGUAGACGU_____________U________	3'
		____________CGC_____UAUUU_UGGUACGA
		____________\|\|\|_____\|\|.\|._.\|\|\|\|\|\|\|
		____________GCG_____AUGAG_GCCAUGCU
(miRNA)	3'	_______________UAAUA_____U________	5'

ENSG00000166068 (SPRED1)

hsa-miR-126-3p

0.822205299480971

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

507-530

0.0357342585395673

Position on chromosome:

15:38644373-38644396

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUUA____UA____AAAUGUAA_______	3'
		_____UAUU___ACU________GGUACGA
		_____.\|\|\|___\|\|\|________\|\|\|\|\|\|\|
		_____GUAA___UGA________CCAUGCU
(miRNA)	3'	____C____UAA___GUG____________	5'

ENSG00000145632 (PLK2)

hsa-miR-126-3p

0.813026851508763

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

489-503

0.0347281007594707

Position on chromosome:

5:57750298-57750312

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUGAAGAAGAUGGA___G________________	3'
		______________CAU___UG___GUGGUACGA
		______________\|\|\|___\|.___..\|\|\|\|\|\|\|
		______________GUA___AU___UGCCAUGCU
(miRNA)	3'	_____________C___AUA__GAG_________	5'

ENSG00000169047 (IRS1)

hsa-miR-126-3p

0.805942142870091

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

4818-4837

0.0302560880676881

Position on chromosome:

2:227600851-227600870

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CAUAUCUUC____UCAGUAGA________	3'
		_________CUCA________UGGUACGA
		_________\|\|\|\|________.\|\|\|\|\|\|\|
		_________GAGU________GCCAUGCU
(miRNA)	3'	________U____________________	5'

UTR3

6mer

4560-4584

0.00372111424134099

Position on chromosome:

2:227600593-227600617

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	AUUU___C__C____G_AAC__U______	3'
		____CAU_UG_UGCU_A___UG_GUACGA
		____\|\|\|_\|._\|.\|\|_\|___.\|_\|\|\|\|\|\|
		____GUA_AU_AUGA_U___GC_CAUGCU
(miRNA)	3'	___C______A____G_____________	5'

ENSG00000259040 (BLOC1S5-TXNDC5)

hsa-miR-126-3p

0.799306561509902

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1739-1759

0.0332925604877216

Position on chromosome:

6:7883494;7884592-7883499;7884606

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GGAAUAUC____GCAAG______________	3'
		________UGCA_____UAUU__CGGUACGA
		________.\|\|\|_____\|\|.\|__\|\|\|\|\|\|\|\|
		________GCGU_____AUGA__GCCAUGCU
(miRNA)	3'	____________AAUA_____GU________	5'

ENSG00000157800 (SLC37A3)

hsa-miR-126-3p

0.791755375055499

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

2422-2445

0.0325337601300072

Position on chromosome:

7:140048443-140048466

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GAAGC__ACAAGCUGU____UU________	3'
		_____CG_________C_CA__UGGUACGA
		_____\|\|_________\|_\|\|__.\|\|\|\|\|\|\|
		_____GC_________G_GU__GCCAUGCU
(miRNA)	3'	_______GUAAUAAU__A____________	5'

ENSG00000100417 (PMM1)

hsa-miR-126-3p

0.787248166784508

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

107-128

0.0294024880218551

Position on chromosome:

22:41973005-41973026

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGAGGAG_____________AGUAU________	3'
		_______GCG____UGCUCA_____CGGUACGA
		_______\|\|.____\|.\|\|\|\|_____\|\|\|\|\|\|\|\|
		_______CGU____AUGAGU_____GCCAUGCU
(miRNA)	3'	______G___AAUA___________________	5'

UTR3

6mer

63-84

0.00268799383654116

Position on chromosome:

22:41972961-41972982

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GCCUGCC___CC__GG_____AUGA_______	3'
		_______UGC__UG_____CG____GGUACGG
		_______.\|\|__\|._____\|.____\|\|\|\|\|\|.
		_______GCG__AU_____GU____CCAUGCU
(miRNA)	3'	__________UA__AAUGA__G__________	5'

ENSG00000130559 (CAMSAP1)

hsa-miR-126-3p

0.769285365302637

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

2706-2731

0.0288977501493436

Position on chromosome:

9:138703039-138703064

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AUU_______UUCAU__AU_UG_______	3'
		___UAUUGUU_____CU__U__GGUACGA
		___.\|\|\|.\|\|_____\|\|__.__\|\|\|\|\|\|\|
		___GUAAUAA_____GA__G__CCAUGCU
(miRNA)	3'	__C_______U_________UG_______	5'

UTR3

7mer

2898-2922

0.00793270933136822

Position on chromosome:

9:138714596-138714620

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCAG__AGGGCCCCCAGCCUU________	3'
		____CG_______________UGGUACGA
		____\|\|_______________.\|\|\|\|\|\|\|
		____GC_______________GCCAUGCU
(miRNA)	3'	______GUAAUAAUGAGU___________	5'

ENSG00000165355 (FBXO33)

hsa-miR-126-3p

0.762488133684415

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

552-569

0.0297688599427891

Position on chromosome:

14:39867425-39867442

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CCACCUGACCC__GUU___A___________	3'
		___________CA___UUA___GUGGUACGA
		___________\|\|___\|\|\|___..\|\|\|\|\|\|\|
		___________GU___AAU___UGCCAUGCU
(miRNA)	3'	__________C__AAU___GAG_________	5'

ENSG00000089101 (C20orf26)

hsa-miR-126-3p

0.757037279559996

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

160-171

0.0292807498494245

Position on chromosome:

20:20278992-20279003

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	CUCCUCAACAACCUGUG______________	3'
		_________________UGCU__CGGUACGA
		_________________\|.\|\|__\|\|\|\|\|\|\|\|
		_________________AUGA__GCCAUGCU
(miRNA)	3'	________________A____GU________	5'

ENSG00000151240 (DIP2C)

hsa-miR-126-3p

0.75171377077394

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

2624-2630

0.0288111704486426

Position on chromosome:

10:322754-322760

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	UCAUCCUUUUAGGAAAGUUUGA_______	3'
		______________________GGUACGA
		______________________\|\|\|\|\|\|\|
		______________________CCAUGCU
(miRNA)	3'	_____________________G_______	5'

ENSG00000169851 (PCDH7)

hsa-miR-126-3p

0.732273154223758

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3677-3695

0.0271508372891043

Position on chromosome:

4:31148149-31148167

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UUAAAGCACU______________GUG________	3'
		__________UGCG______UUCA___UGGUACGA
		__________.\|\|.______.\|\|\|___.\|\|\|\|\|\|\|
		__________GCGU______GAGU___GCCAUGCU
(miRNA)	3'	______________AAUAAU_______________	5'

ENSG00000120889 (TNFRSF10B)

hsa-miR-126-3p

0.724326222506674

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

512-538

0.0264944200681995

Position on chromosome:

8:22878158-22878184

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CU___CCAGGC__GAG___A__________	3'
		__CGC______UG___UGC__ACGGUACGA
		__\|\|\|______\|.___\|.\|__\|\|\|\|\|\|\|\|\|
		__GCG______AU___AUG__UGCCAUGCU
(miRNA)	3'	_____UA______A_____AG_________	5'

ENSG00000142634 (EFHD2)

hsa-miR-126-3p

0.713170056596021

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1558-1572

0.0255923438413313

Position on chromosome:

1:15756779-15756793

Conserved species:

rheMac2,rn4,mm9,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	AAAAGCUACUUCUU____________________	3'
		______________CAUU____C_CGUGGUACGA
		______________\|\|\|\|____\|_\|..\|\|\|\|\|\|\|
		______________GUAA____G_GUGCCAUGCU
(miRNA)	3'	_____________C____UAAU_A__________	5'

ENSG00000103257 (SLC7A5)

hsa-miR-126-3p

0.70369553384643

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

2777-2798

0.024842611925557

Position on chromosome:

16:87866406-87866427

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UGGAGGC___U__GAAA_____________	3'
		_______UGC_GU____ACUC_UGGUACGA
		_______.\|\|_.\|____\|\|\|\|_.\|\|\|\|\|\|\|
		_______GCG_UA____UGAG_GCCAUGCU
(miRNA)	3'	_____________AUAA____U________	5'

ENSG00000172262 (ZNF131)

hsa-miR-126-3p

0.702103569473873

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1268-1287

0.0247180186569509

Position on chromosome:

5:43175489-43175508

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UUAUAUUCU______AUAG_UG_______	3'
		_________UAUUAU____U__GGUACGA
		_________.\|\|\|\|\|____.__\|\|\|\|\|\|\|
		_________GUAAUA____G__CCAUGCU
(miRNA)	3'	________C______AUGA_UG_______	5'