DIANA TOOLS - MicroT-CDS

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Results: 1085 targets for miRNAs hsa-miR-125b-5p

. Threshold is set to 0.7.

Name:	hsa-miR-125b-5p
Alternative description:	MIMAT0000423
Related names:
miRNA sequence:	ucccugagacccuaacuuguga
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Alzheimer Disease Anemia, Sickle Cell Aortic Valve Stenosis Asthma Atherosclerosis Bites and Stings Body Weight Bone Neoplasms Brain Neoplasms Breast Neoplasms Breast Neoplasms, Male Carcinoma Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Pancreatic Ductal Carcinoma, Squamous Cell Carcinoma, Transitional Cell Cardiomyopathy, Hypertrophic Cell Transformation, Neoplastic Cerebellar Neoplasms Colonic Neoplasms Colorectal Neoplasms Cystadenocarcinoma, Serous Dermatitis, Atopic Diabetes Mellitus, Type 2 Disease Disease Models, Animal Disease Progression Echinococcosis Endometriosis Facial Neoplasms Fibrosis Glioblastoma Glioma Heart Diseases Hematologic Neoplasms Hepatitis C, Chronic Huntington Disease Hyperglycemia Hyperinsulinism Hypertrophy Inflammation Influenza in Birds Ischemia Leiomyoma Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myeloid, Acute Listeriosis Liver Neoplasms Lung Neoplasms Lupus Nephritis Lymphatic Metastasis Lymphoma, Large B-Cell, Diffuse Marek Disease Medulloblastoma Melanoma Mouth Neoplasms Multiple Myeloma Multiple Sclerosis Muscle Neoplasms Myocardial Infarction Myocardial Reperfusion Injury Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Neoplasms, Germ Cell and Embryonal Nerve Degeneration Nerve Sheath Neoplasms Neuralgia Neuroblastoma Obesity Ovarian Neoplasms Pancreatic Neoplasms Pancreatitis, Chronic Poultry Diseases Precursor Cell Lymphoblastic Leukemia-Lymphoma Prostatic Neoplasms Psoriasis Recurrence Sarcoma, Kaposi Stomach Neoplasms Thyroid Neoplasms Urinary Bladder Neoplasms Uterine Cervical Neoplasms Uterine Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000206557 (TRIM71)

hsa-miR-125b-5p

0.999999452244764

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

87-110

0.224165428496035

Position on chromosome:

3:32933391-32933414

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	GAAUU___AAG___AAACA__________	3'
		_____UCA___AAG_____GUCUCAGGGA
		_____\|\|\|___\|\|\|_____\|\|\|\|\|\|\|\|\|\|
		_____AGU___UUC_____CAGAGUCCCU
(miRNA)	3'	________G_____AAUCC__________	5'

UTR3

7mer

1045-1067

0.0035360540263647

Position on chromosome:

3:32934349-32934371

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGACAU___U__GCUG____AG_______	3'
		______GCG_GU____AGGG__UCAGGGA
		______.\|._\|\|____\|\|\|\|__\|\|\|\|\|\|\|
		______UGU_CA____UCCC__AGUCCCU
(miRNA)	3'	_____G___U__A_______AG_______	5'

UTR3

7mer

1242-1249

0.0124868239598201

Position on chromosome:

3:32934546-32934553

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	AAUUUUUUCCUGCUUUGAAAG________	3'
		_____________________UUCAGGGA
		_____________________.\|\|\|\|\|\|\|
		_____________________GAGUCCCU
(miRNA)	3'	____________________A________	5'

UTR3

8mer

1699-1721

0.00615533540158223

Position on chromosome:

3:32935003-32935025

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAAAU__UG___GAGCCCUC________	3'
		______UC__GAG________CUCAGGGA
		______\|\|__.\|\|________\|\|\|\|\|\|\|\|
		______AG__UUC________GAGUCCCU
(miRNA)	3'	________UG___AAUCCCA_________	5'

ENSG00000156171 (DRAM2)

hsa-miR-125b-5p

0.999995539342991

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

784-792

0.212066673358471

Position on chromosome:

1:111660739-111660747

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUUUCUGUAAUGAUUAUGAU_________	3'
		____________________UCUCAGGGA
		____________________\|\|\|\|\|\|\|\|\|
		____________________AGAGUCCCU
(miRNA)	3'	___________________C_________	5'

ENSG00000100796 (SMEK1)

hsa-miR-125b-5p

0.999969485884462

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

899-920

0.144888044707976

Position on chromosome:

14:91924854-91924875

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGGACCA____UUGCCCUUU_________	3'
		_______CACA_________UCUCAGGGA
		_______\|\|\|\|_________\|\|\|\|\|\|\|\|\|
		_______GUGU_________AGAGUCCCU
(miRNA)	3'	______A____UCAAUCCC__________	5'

UTR3

7mer

185-211

0.0357505307779501

Position on chromosome:

14:91924140-91924166

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CA___G___CU__CUUG__AA_________	3'
		__UCA_CAA__GU____AG___UUCAGGGA
		__\|\|\|_\|\|\|__\|\|____\|\|___.\|\|\|\|\|\|\|
		__AGU_GUU__CA____UC___GAGUCCCU
(miRNA)	3'	_____________A_____CCA________	5'

ENSG00000197594 (ENPP1)

hsa-miR-125b-5p

0.99995980033696

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

118-141

0.17086283684596

Position on chromosome:

6:132211770-132211793

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGCCC___GU_A_GC__ACA_________	3'
		_____UCG__G_U__GG___UCUCAGGGA
		_____\|\|.__._\|__\|\|___\|\|\|\|\|\|\|\|\|
		_____AGU__U_A__CC___AGAGUCCCU
(miRNA)	3'	________GU_C_AU__C___________	5'

UTR3

7mer

2194-2208

0.00354957681130446

Position on chromosome:

6:132213846-132213860

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUGGAUACCAAGAA_____A_______________	3'
		______________UACAA___AG____UCAGGGA
		______________.\|\|\|\|___\|\|____\|\|\|\|\|\|\|
		______________GUGUU___UC____AGUCCCU
(miRNA)	3'	_____________A_____CAA__CCAG_______	5'

UTR3

6mer

4278-4300

0.00172047939190159

Position on chromosome:

6:132215930-132215952

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAGGAG_____A____CAUGGAA______	3'
		______ACAAG_UGGG_______CAGGGA
		______\|\|\|\|\|_\|.\|\|_______\|\|\|\|\|\|
		______UGUUC_AUCC_______GUCCCU
(miRNA)	3'	_____G_____A____CAGA_________	5'

ENSG00000147324 (MFHAS1)

hsa-miR-125b-5p

0.999953226031354

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

2364-2385

0.169866781139889

Position on chromosome:

8:8643228-8643249

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AAAAAAA____CGAA___CU_________	3'
		_______AAGU____UGG__UCUCAGGGA
		_______\|\|\|\|____\|.\|__\|\|\|\|\|\|\|\|\|
		_______UUCA____AUC__AGAGUCCCU
(miRNA)	3'	______G___________CC_________	5'

UTR3

7mer

1827-1849

0.00379041562822348

Position on chromosome:

8:8642691-8642713

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GCUGGG______A_____CACA________	3'
		______CA_GAG_UGGGG____CUCAGGGG
		______\|\|_.\|\|_\|.\|\|\|____\|\|\|\|\|\|\|.
		______GU_UUC_AUCCC____GAGUCCCU
(miRNA)	3'	_____A__G___A_____A___________	5'

ENSG00000162522 (KIAA1522)

hsa-miR-125b-5p

0.999948173397548

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

41-54

0.182768789722154

Position on chromosome:

1:33238530-33238543

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	GACCCAUCCCAGAAA_____________________	3'
		_______________CACAA_______UCUCAGGGA
		_______________\|\|\|\|\|_______\|\|\|\|\|\|\|\|\|
		_______________GUGUU_______AGAGUCCCU
(miRNA)	3'	______________A_____CAAUCCC_________	5'

UTR3

8mer

639-660

0.00869381608680012

Position on chromosome:

1:33235564-33235585

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GGACGGC___CCCCG___CAC________	3'
		_______CGC_____AGG___CUCAGGGA
		_______\|.\|_____\|\|\|___\|\|\|\|\|\|\|\|
		_______GUG_____UCC___GAGUCCCU
(miRNA)	3'	______A___UUCAA___CA_________	5'

UTR3

7mer

2636-2642

0.00824493514603455

Position on chromosome:

1:33237561-33237567

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAGCCCAGUGCCUGCCCCCUC_______C	3'
		_____________________CUCAGGG_
		_____________________\|\|\|\|\|\|\|_
		_____________________GAGUCCC_
(miRNA)	3'	____________________A_______U	5'

ENSG00000135838 (NPL)

hsa-miR-125b-5p

0.999923704142155

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

52-72

0.165659753123436

Position on chromosome:

1:182798096-182798116

Conserved species:

panTro2,rheMac2,rn4,mm9,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CCUUAAAU___GCAUUUUUU_________	3'
		________AGU_________UCUCAGGGA
		________\|\|\|_________\|\|\|\|\|\|\|\|\|
		________UCA_________AGAGUCCCU
(miRNA)	3'	_______U___AUCCC_____________	5'

ENSG00000185728 (YTHDF3)

hsa-miR-125b-5p

0.999916157298806

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

315-332

0.164118006477094

Position on chromosome:

8:64098981-64098998

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	CUACAUGGGGG__________A_________	3'
		___________ACAAGU__GG_UCUCAGGGA
		___________\|\|\|\|\|\|__\|\|_\|\|\|\|\|\|\|\|\|
		___________UGUUCA__CC_AGAGUCCCU
(miRNA)	3'	__________G______AU__C_________	5'

ENSG00000141179 (PCTP)

hsa-miR-125b-5p

0.999912160053887

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1841-1863

0.163356739229519

Position on chromosome:

17:53854546-53854568

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	CAAAGG_____CCUUGAUGA_________	3'
		______CACAG_________UCUCAGGGA
		______\|\|\|\|._________\|\|\|\|\|\|\|\|\|
		______GUGUU_________AGAGUCCCU
(miRNA)	3'	_____A_____CAAUCCC___________	5'

ENSG00000178229 (ZNF543)

hsa-miR-125b-5p

0.999882729799898

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

222-246

0.0963791388266253

Position on chromosome:

19:57840856-57840880

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UAGU________GAAAUAUUA_________	3'
		____UUAC_AGU_________UCUCAGGGA
		____\|.\|\|_\|\|\|_________\|\|\|\|\|\|\|\|\|
		____AGUG_UCA_________AGAGUCCCU
(miRNA)	3'	________U___AUCCC_____________	5'

UTR3

9mer

535-555

0.062254301125034

Position on chromosome:

19:57841169-57841189

Conserved species:

panTro2,rheMac2,oryCun2,canFam2

Binding area:

(Transcript)	5'	UGAGCCAC____CCC____CCA_________	3'
		________CGCG_____GG___UCUCAGGGA
		________\|.\|._____\|\|___\|\|\|\|\|\|\|\|\|
		________GUGU_____CC___AGAGUCCCU
(miRNA)	3'	_______A____UCAAU__C___________	5'

ENSG00000138792 (ENPEP)

hsa-miR-125b-5p

0.99986188835937

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

201-208

0.151627663490513

Position on chromosome:

4:111482916-111482923

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	ACUAAUAGAGUACUUAAUAUA________	3'
		_____________________CUCAGGGA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GAGUCCCU
(miRNA)	3'	____________________A________	5'

UTR3

6mer

3552-3558

0.00433186510764258

Position on chromosome:

4:111486267-111486273

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUCCUCCUCCUUCCUCUAC_______U	3'
		_____________________UUCAGGG_
		_____________________.\|\|\|\|\|\|_
		_____________________GAGUCCC_
(miRNA)	3'	____________________A_______U	5'

ENSG00000106003 (LFNG)

hsa-miR-125b-5p

0.999824452290005

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

39-55

0.0021153788129727

Position on chromosome:

7:2566886-2566902

Conserved species:

panTro2,rn4,mm9

Binding area:

(Transcript)	5'	GCGCCCCUGGUA_____________C________	3'
		____________UC_CAA___AGGG_C_CAGGGA
		____________\|\|_\|\|\|___\|\|\|\|_\|_\|\|\|\|\|\|
		____________AG_GUU___UCCC_G_GUCCCU
(miRNA)	3'	______________U___CAA____A_A______	5'

UTR3

6mer

327-354

0.00252970000426166

Position on chromosome:

7:2567174-2567201

Conserved species:

panTro2

Binding area:

(Transcript)	5'	C______GCUCC___CUACUUUG______	3'
		_UACGGG_____GGG________CAGGGA
		_.\|\|..\|_____\|\|\|________\|\|\|\|\|\|
		_GUGUUC_____CCC________GUCCCU
(miRNA)	3'	A______AAU_____AGA___________	5'

UTR3

9mer

1136-1154

0.14739376580048

Position on chromosome:

7:2567983-2568001

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GCGAAUGAUA____AAAAGU_________	3'
		__________AGGG______UCUCAGGGA
		__________\|\|\|\|______\|\|\|\|\|\|\|\|\|
		__________UCCC______AGAGUCCCU
(miRNA)	3'	_________A___________________	5'

ENSG00000128944 (KNSTRN)

hsa-miR-125b-5p

0.999823120224938

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

146-169

0.15191527227209

Position on chromosome:

15:40681792;40682037-40681812;40682039

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGCAC__G______ACUGAAA________	3'
		_____CA_AAGUUG_______CUCAGGGA
		_____\|\|_\|\|\|\|\|._______\|\|\|\|\|\|\|\|
		_____GU_UUCAAU_______GAGUCCCU
(miRNA)	3'	____A__G______CCCA___________	5'

ENSG00000171045 (TSNARE1)

hsa-miR-125b-5p

0.999811277115112

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

631-656

0.075391809848842

Position on chromosome:

8:143352477-143352502

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	CCA_U____GCUCG___UCU_________	3'
		___C_CGGG_____AGG___UCUCAGGGA
		___\|_\|..\|_____\|\|\|___\|\|\|\|\|\|\|\|\|
		___G_GUUC_____UCC___AGAGUCCCU
(miRNA)	3'	__A_U____AA______C___________	5'

UTR3

8mer

334-358

0.075464026308979

Position on chromosome:

8:143352180-143352204

Conserved species:

rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GGAC___GU__ACC___UCUA________	3'
		____UCA__GG___AGG____CUCAGGGA
		____\|\|\|__.\|___\|\|\|____\|\|\|\|\|\|\|\|
		____AGU__UC___UCC____GAGUCCCU
(miRNA)	3'	_______GU__AA____CA__________	5'

ENSG00000151702 (FLI1)

hsa-miR-125b-5p

0.999801084738234

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

486-508

0.146308606927569

Position on chromosome:

11:128642856-128642878

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CUGUUG_____CCUC_____C___________	3'
		______UCACA____AGUUA____CUCAGGGA
		______\|\|\|\|\|____\|\|\|\|\|____\|\|\|\|\|\|\|\|
		______AGUGU____UCAAU____GAGUCCCU
(miRNA)	3'	____________________CCCA________	5'

UTR3

6mer

2428-2439

0.0036873840510231

Position on chromosome:

11:128682031-128682042

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUUAUUUAACAGGCAUA_____________________	3'
		_________________CACAAG_________CAGGGA
		_________________\|\|\|\|\|\|_________\|\|\|\|\|\|
		_________________GUGUUC_________GUCCCU
(miRNA)	3'	________________A______AAUCCCAGA______	5'

ENSG00000158863 (FAM160B2)

hsa-miR-125b-5p

0.999784935759978

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

141-161

0.0171345015598425

Position on chromosome:

8:21960584-21960604

Conserved species:

panTro2,rheMac2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUUGACCA___C__ACU____________	3'
		________CAC_AG___GGGUUUCAGGGA
		________\|\|\|_\|\|___\|\|\|\|.\|\|\|\|\|\|\|
		________GUG_UC___CCCAGAGUCCCU
(miRNA)	3'	_______A___U__AAU____________	5'

UTR3

6mer

823-849

0.00138941729956272

Position on chromosome:

8:21961266-21961292

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GA__G___ACCCUUC_____AG________	3'
		__UA_AAG_______UGGGG__C_CAGGGA
		__.\|_\|\|\|_______\|.\|\|\|__\|_\|\|\|\|\|\|
		__GU_UUC_______AUCCC__G_GUCCCU
(miRNA)	3'	_A__G___A___________A__A______	5'

UTR3

7mer

834-858

0.00210234010837015

Position on chromosome:

8:21961277-21961301

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CCCU__UG___AGCC____AG________	3'
		____UC__GGG____AGGG__CUCAGGGG
		____\|\|__..\|____\|\|\|\|__\|\|\|\|\|\|\|.
		____AG__UUC____UCCC__GAGUCCCU
(miRNA)	3'	______UG___AA______A_________	5'

UTR3

6mer

1553-1566

0.00203105312551421

Position on chromosome:

8:21961996-21962009

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAUUCUUUUUCUAG___UGCAG_____________	3'
		_______________CGC____________CAGGGA
		_______________\|.\|____________\|\|\|\|\|\|
		_______________GUG____________GUCCCU
(miRNA)	3'	______________A___UUCAAUCCCAGA______	5'

UTR3

9mer

1920-1940

0.126062641128624

Position on chromosome:

8:21962363-21962383

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAAAAAUU________GU__U_________	3'
		________UCACAGGU___G_UCUCAGGGA
		________\|\|\|\|\|.\|\|___\|_\|\|\|\|\|\|\|\|\|
		________AGUGUUCA___C_AGAGUCCCU
(miRNA)	3'	________________AUC_C_________	5'

ENSG00000162415 (ZSWIM5)

hsa-miR-125b-5p

0.999774852100454

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1720-1745

0.145300449727215

Position on chromosome:

1:45483791-45483816

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AAA_____AACACU___CCA__________	3'
		___CACAG______GUU____UCUCAGGGA
		___\|\|\|\|.______\|\|\|____\|\|\|\|\|\|\|\|\|
		___GUGUU______CAA____AGAGUCCCU
(miRNA)	3'	__A______________UCCC_________	5'

UTR3

6mer

1284-1296

0.00267044671793053

Position on chromosome:

1:45483355-45483367

Conserved species:

panTro2,rheMac2,mm9,oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GCUGAACACCUGAGAA______G_____________	3'
		________________ACAAGU________CAGGGA
		________________\|\|\|\|\|\|________\|\|\|\|\|\|
		________________UGUUCA________GUCCCU
(miRNA)	3'	_______________G______AUCCCAGA______	5'

ENSG00000130449 (ZSWIM6)

hsa-miR-125b-5p

0.999742976060048

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

586-599

0.147387428771861

Position on chromosome:

5:60840731-60840744

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	UAGCGACUGUCAACA____U________________	3'
		_______________UACA________UCUCAGGGA
		_______________.\|\|\|________\|\|\|\|\|\|\|\|\|
		_______________GUGU________AGAGUCCCU
(miRNA)	3'	______________A____UCAAUCCC_________	5'

UTR3

6mer

804-820

0.00362132212050251

Position on chromosome:

5:60840949-60840965

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	AGGACUAAAAG____CC___C__________U	3'
		___________UACG__UUG____UUCAGGG_
		___________.\|\|.__\|\|.____.\|\|\|\|\|\|_
		___________GUGU__AAU____GAGUCCC_
(miRNA)	3'	__________A____UC___CCCA_______U	5'

UTR3

7mer

1128-1155

0.00726349923468865

Position on chromosome:

5:60786708-60786735

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	U__C____GC_____ACCACGGA_______	3'
		_UC_CAGG___GGGU________UCAGGGA
		_\|\|_\|\|.\|___\|\|\|\|________\|\|\|\|\|\|\|
		_AG_GUUC___CCCA________AGUCCCU
(miRNA)	3'	___U____AAU____G______________	5'

UTR3

7mer

1477-1495

0.00388521566041111

Position on chromosome:

5:60817234-60817252

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCAACUUAA_____UGCUCU_C_______U	3'
		_________C_CAA______G_CUCAGGG_
		_________\|_\|\|\|______\|_\|\|\|\|\|\|\|_
		_________G_GUU______C_GAGUCCC_
(miRNA)	3'	________A_U___CAAUCC_A_______U	5'

ENSG00000101945 (SUV39H1)

hsa-miR-125b-5p

0.999734251143877

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

135-145

0.0030329605391719

Position on chromosome:

X:48566097-48566107

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	CCUGCUCCUACCUGCUC____________________C	3'
		_________________UACG_________UUCAGGG_
		_________________.\|\|._________.\|\|\|\|\|\|_
		_________________GUGU_________GAGUCCC_
(miRNA)	3'	________________A____UCAAUCCCA_______U	5'

UTR3

6mer

580-604

0.00212154789083124

Position on chromosome:

X:48566542-48566566

Conserved species:

canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAA___CUG_______UCUUCU______C	3'
		___GAG___UAGGGUC______UCAGGG_
		___.\|\|___\|\|\|\|\|\|\|______\|\|\|\|\|\|_
		___UUC___AUCCCAG______AGUCCC_
(miRNA)	3'	__G___A_____________________U	5'

UTR3

9mer

931-950

0.140105992245862

Position on chromosome:

X:48566893-48566912

Conserved species:

rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CACCUGGUC____U______AUU__________	3'
		_________CACG_____GG___GUCUCAGGGA
		_________\|\|\|._____\|\|___\|\|\|\|\|\|\|\|\|\|
		_________GUGU_____CC___CAGAGUCCCU
(miRNA)	3'	________A____UCAAU_______________	5'

ENSG00000187764 (SEMA4D)

hsa-miR-125b-5p

0.999694826717897

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1685-1709

0.140611274809531

Position on chromosome:

9:91992986-91993010

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CGGC_____UUGCUUA__AU_________	3'
		____UUACG_______AG__UCUCAGGGA
		____\|.\|\|._______\|\|__\|\|\|\|\|\|\|\|\|
		____AGUGU_______UC__AGAGUCCCU
(miRNA)	3'	_________UCAA_____CC_________	5'

UTR3

6mer

103-120

0.00238775476495814

Position on chromosome:

9:91991404-91991421

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUAGUCAAUA_____CG___U__________C	3'
		__________CACAA___AG_GG__UCAGGG_
		__________\|\|\|\|\|___\|\|_\|\|__\|\|\|\|\|\|_
		__________GUGUU___UC_CC__AGUCCC_
(miRNA)	3'	_________A_____CAA_____AG______U	5'

ENSG00000159784 (FAM131B)

hsa-miR-125b-5p

0.99965139317913

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

3961-3981

0.127122919970907

Position on chromosome:

7:143056115;143056419-143056117;143056436

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GGCCCUGG_______CAUCAU_________	3'
		________C_CAAGU______UCUCAGGGA
		________\|_\|\|\|\|\|______\|\|\|\|\|\|\|\|\|
		________G_GUUCA______AGAGUCCCU
(miRNA)	3'	_______A_U_____AUCCC__________	5'

UTR3

6mer

3822-3847

0.00347139957406689

Position on chromosome:

7:143055976-143056001

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	CAA_____CCAU_A___CGUGCG______	3'
		___CACAG____G_GUC______CAGGGA
		___\|\|\|\|.____\|_\|\|\|______\|\|\|\|\|\|
		___GUGUU____C_CAG______GUCCCU
(miRNA)	3'	__A_____CAAU_C___A___________	5'

UTR3

7mer

2653-2674

0.00299152577966499

Position on chromosome:

7:143053147-143053168

Conserved species:

panTro2,rn4,mm9,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AUCCCUA_UG__AGAAC__AC_________	3'
		_______C__AG_____AG___CUCAGGGG
		_______\|__\|._____\|\|___\|\|\|\|\|\|\|.
		_______G__UU_____UC___GAGUCCCU
(miRNA)	3'	______A_UG__CAA____CCA________	5'

UTR3

7mer

2125-2148

0.007237667326966

Position on chromosome:

7:143052619-143052642

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,monDom5

Binding area:

(Transcript)	5'	AUUU______CUUC_____CA_______U	3'
		____UUAUAA____UUGGG__CUCAGGG_
		____\|.\|.\|\|____\|\|.\|\|__\|\|\|\|\|\|\|_
		____AGUGUU____AAUCC__GAGUCCC_
(miRNA)	3'	__________C________CA_______U	5'

ENSG00000196371 (FUT4)

hsa-miR-125b-5p

0.999595252809447

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3419-3435

0.00272444390391685

Position on chromosome:

11:94282312-94282328

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCUAAAUUUUCA___A___AAAC______	3'
		____________AGG_UCU____CAGGGA
		____________\|\|\|_\|\|\|____\|\|\|\|\|\|
		____________UCC_AGA____GUCCCU
(miRNA)	3'	___________A___C_____________	5'

UTR3

7mer

3964-3986

0.017247606016014

Position on chromosome:

11:94282857-94282879

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2

Binding area:

(Transcript)	5'	AAAGCU_____UGCCUCAAAUA_______	3'
		______UUAUA___________UCAGGGA
		______\|.\|.\|___________\|\|\|\|\|\|\|
		______AGUGU___________AGUCCCU
(miRNA)	3'	___________UCAAUCCCAG________	5'

UTR3

9mer

4049-4076

0.118410099700083

Position on chromosome:

11:94282942-94282969

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,galGal3

Binding area:

(Transcript)	5'	U_____CAUUUUUGAAU_U__________	3'
		_CAAGU___________G_GUCUCAGGGA
		_\|\|\|\|\|___________\|_\|\|\|\|\|\|\|\|\|\|
		_GUUCA___________C_CAGAGUCCCU
(miRNA)	3'	U_____AU__________C__________	5'

ENSG00000036672 (USP2)

hsa-miR-125b-5p

0.999584151519419

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1463-1488

0.00514563515331515

Position on chromosome:

11:119227388-119227413

Conserved species:

panTro2,rheMac2,mm9,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AG__G____GGAUGC__CCUGA______U	3'
		__CA_GAGU______AG_____UCAGGG_
		__\|\|_.\|\|\|______\|\|_____\|\|\|\|\|\|_
		__GU_UUCA______UC_____AGUCCC_
(miRNA)	3'	_A__G____A_______CCAG_______U	5'

UTR3

6mer

1417-1438

0.00204377789810467

Position on chromosome:

11:119227342-119227363

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGCUUUC_UG__CU___U__C_CGG______	3'
		_______C__AG____G_GG_C___CAGGGA
		_______\|__\|.____\|_\|\|_\|___\|\|\|\|\|\|
		_______G__UU____C_CC_G___GUCCCU
(miRNA)	3'	______A_UG__CAAU____A_A________	5'

UTR3

9mer

412-427

0.130750315339178

Position on chromosome:

11:119226337-119226352

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UAGGCCCUUUGGA_____________________	3'
		_____________C_CGAGUU____UCUCAGGGA
		_____________\|_\|.\|\|\|\|____\|\|\|\|\|\|\|\|\|
		_____________G_GUUCAA____AGAGUCCCU
(miRNA)	3'	____________A_U______UCCC_________	5'

ENSG00000090905 (TNRC6A)

hsa-miR-125b-5p

0.999527613738687

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

327-347

0.0172230008807315

Position on chromosome:

16:24800766-24800786

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GAGAAACA____UAUCAU___C________	3'
		________UCAC_______GG_UUCAGGGA
		________\|\|\|\|_______\|\|_.\|\|\|\|\|\|\|
		________AGUG_______CC_GAGUCCCU
(miRNA)	3'	____________UUCAAUC__A________	5'

UTR3

6mer

1455-1473

0.00175157036771

Position on chromosome:

16:24801894-24801912

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGAAAUCUA_UG___AAG___A________U	3'
		_________C__AGG___AGG___UCAGGG_
		_________\|__\|.\|___\|\|\|___\|\|\|\|\|\|_
		_________G__UUC___UCC___AGUCCC_
(miRNA)	3'	________A_UG___AA____CAG______U	5'

UTR3

7mer

1797-1817

0.0108423108659168

Position on chromosome:

16:24802236-24802256

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CUCUGCAA_____ACUUUUAA________	3'
		________CACAG________CUCAGGGG
		________\|\|\|\|.________\|\|\|\|\|\|\|.
		________GUGUU________GAGUCCCU
(miRNA)	3'	_______A_____CAAUCCCA________	5'

UTR3

6mer

1856-1870

0.000716790888520441

Position on chromosome:

16:24802295-24802309

Conserved species:

panTro2,rheMac2,rn4,mm9,galGal3

Binding area:

(Transcript)	5'	UGGUAAUGAUACC____CU__A____________U	3'
		_____________UCAU__GU_______UCAGGG_
		_____________\|\|\|.__\|\|_______\|\|\|\|\|\|_
		_____________AGUG__CA_______AGUCCC_
(miRNA)	3'	_________________UU__AUCCCAG______U	5'

UTR3

6mer

2018-2038

0.00194938349024053

Position on chromosome:

16:24802457-24802477

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3,danRer6

Binding area:

(Transcript)	5'	GGAAUGAC______AAGAAUAAA_______	3'
		________UCGCAA__________CAGGGA
		________\|\|.\|\|\|__________\|\|\|\|\|\|
		________AGUGUU__________GUCCCU
(miRNA)	3'	______________CAAUCCCAGA______	5'

UTR3

8mer

4465-4485

0.0513074403249034

Position on chromosome:

16:24828246-24828266

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	ACUGUGCG_G______ACCAC________	3'
		________G_AAGUUG_____CUCAGGGA
		________._\|\|\|\|\|._____\|\|\|\|\|\|\|\|
		________U_UUCAAU_____GAGUCCCU
(miRNA)	3'	_______G_G______CCCA_________	5'

UTR3

8mer

4834-4856

0.0520648451519186

Position on chromosome:

16:24833405-24833427

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUCCAG_UG____GAG__CAG________	3'
		______C__GGGU___AG___CUCAGGGA
		______\|__..\|\|___\|\|___\|\|\|\|\|\|\|\|
		______G__UUCA___UC___GAGUCCCU
(miRNA)	3'	_____A_UG____A____CCA________	5'

ENSG00000133121 (STARD13)

hsa-miR-125b-5p

0.999307673766589

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2427-2434

0.0681783082502559

Position on chromosome:

13:33679699-33679706

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UUUGCCCAGUGUGACAUCAAA________	3'
		_____________________CUCAGGGA
		_____________________\|\|\|\|\|\|\|\|
		_____________________GAGUCCCU
(miRNA)	3'	____________________A________	5'

UTR3

7mer

1365-1379

0.0143779076425318

Position on chromosome:

13:33678637-33678651

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CAAAUCCUAGAUCG______C_______________	3'
		______________UUACAG________UUCAGGGA
		______________\|.\|\|\|.________.\|\|\|\|\|\|\|
		______________AGUGUU________GAGUCCCU
(miRNA)	3'	____________________CAAUCCCA________	5'

UTR3

7mer

1039-1047

0.00668812217288336

Position on chromosome:

13:33678311-33678319

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	AUAACUUAUUGUGUGUUUGA_________	3'
		____________________UUUCAGGGA
		____________________\|.\|\|\|\|\|\|\|
		____________________AGAGUCCCU
(miRNA)	3'	___________________C_________	5'

UTR3

9mer

426-447

0.0416587783244825

Position on chromosome:

13:33677698-33677719

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	GAUUCUG___UUCUA___A__________	3'
		_______CAU_____AGG_GUCUCAGGGA
		_______\|\|._____\|\|\|_\|\|\|\|\|\|\|\|\|\|
		_______GUG_____UCC_CAGAGUCCCU
(miRNA)	3'	______A___UUCAA______________	5'

UTR3

7mer

774-799

0.00361972045827191

Position on chromosome:

13:33685954-33685979

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCA_____AAUCU__CAGCAG________	3'
		___ACGAG_____GG______CUCAGGGG
		___\|\|.\|\|_____\|\|______\|\|\|\|\|\|\|.
		___UGUUC_____CC______GAGUCCCU
(miRNA)	3'	__G_____AAU____CA____________	5'

ENSG00000203867 (RBM20)

hsa-miR-125b-5p

0.999109686155054

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

330-353

0.117004381152134

Position on chromosome:

10:112596067-112596090

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CCUUU______AACCCAACU_________	3'
		_____UCACAA_________UCUCAGGGA
		_____\|\|\|\|\|\|_________\|\|\|\|\|\|\|\|\|
		_____AGUGUU_________AGAGUCCCU
(miRNA)	3'	___________CAAUCCC___________	5'

UTR3

6mer

786-799

0.00323340733812204

Position on chromosome:

10:112596523-112596536

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	CUCCUCUUGAUUUC___A_A_G______U	3'
		______________AGG_G_U_UCAGGG_
		______________\|\|\|_\|_\|_\|\|\|\|\|\|_
		______________UCC_C_A_AGUCCC_
(miRNA)	3'	_____________A_______G______U	5'

UTR3

6mer

3214-3234

0.00525229812317887

Position on chromosome:

10:112598951-112598971

Conserved species:

panTro2,dasNov2,monDom5,xenTro2

Binding area:

(Transcript)	5'	GUGUGAG__G___CC_____UA________U	3'
		_______CA_CAG__GUUAG____UCAGGG_
		_______\|\|_\|\|.__\|\|\|\|\|____\|\|\|\|\|\|_
		_______GU_GUU__CAAUC____AGUCCC_
(miRNA)	3'	______A_____________CCAG______U	5'

ENSG00000140265 (ZSCAN29)

hsa-miR-125b-5p

0.99908454807008

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1343-1369

0.00189212376784004

Position on chromosome:

15:43651713-43651739

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	GA_____CCCU___CCCUAAUGG______	3'
		__ACAGG____UUA_________CAGGGA
		__\|\|\|.\|____\|\|\|_________\|\|\|\|\|\|
		__UGUUC____AAU_________GUCCCU
(miRNA)	3'	_G____________CCCAGA_________	5'

UTR3

7mer

429-446

0.00554503957429225

Position on chromosome:

15:43650799-43650816

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GAAUUCUGUGG_UG__AUA__A__________	3'
		___________C__GA___AG____UCAGGGA
		___________\|__.\|___\|\|____\|\|\|\|\|\|\|
		___________G__UU___UC____AGUCCCU
(miRNA)	3'	__________A_UG__CAA__CCAG_______	5'

UTR3

9mer

33-54

0.123875862921229

Position on chromosome:

15:43650403-43650424

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AUGUUUA___CUAAUCUGUC_________	3'
		_______CAC__________UCUCAGGGA
		_______\|\|\|__________\|\|\|\|\|\|\|\|\|
		_______GUG__________AGAGUCCCU
(miRNA)	3'	______A___UUCAAUCCC__________	5'

UTR3

8mer

1696-1722

0.0101312889431178

Position on chromosome:

15:43658667-43658693

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UA_____CUGUGGCUGAGCGG________	3'
		__UGGGG______________CUCAGGGA
		__\|.\|\|\|______________\|\|\|\|\|\|\|\|
		__AUCCC______________GAGUCCCU
(miRNA)	3'	_A_____A_____________________	5'

UTR3

7mer

692-714

0.00725717318251024

Position on chromosome:

15:43653963-43653985

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AGGAAG____U______CAAAGAC________	3'
		______ACAG____GGG_______CUCAGGGG
		______\|\|\|.____\|\|\|_______\|\|\|\|\|\|\|.
		______UGUU____CCC_______GAGUCCCU
(miRNA)	3'	_____G____CAAU___A______________	5'

ENSG00000196132 (MYT1)

hsa-miR-125b-5p

0.999079218301326

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

299-314

0.126437536083204

Position on chromosome:

20:62872101-62872116

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	UGGAAGCUCAUGG__________U_________	3'
		_____________ACA____AGG_UCUCAGGGA
		_____________\|\|\|____\|\|\|_\|\|\|\|\|\|\|\|\|
		_____________UGU____UCC_AGAGUCCCU
(miRNA)	3'	____________G___UCAA___C_________	5'

UTR3

7mer

104-116

0.00447223886893186

Position on chromosome:

20:62836406-62836418

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CCCCACCCCAGGAUG____________________C	3'
		_______________CACAGG_______CUCAGGG_
		_______________\|\|\|\|.\|_______\|\|\|\|\|\|\|_
		_______________GUGUUC_______GAGUCCC_
(miRNA)	3'	______________A______AAUCCCA_______U	5'

ENSG00000136237 (RAPGEF5)

hsa-miR-125b-5p

0.998986239692036

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3189-3209

0.00128947351304288

Position on chromosome:

7:22161045-22161065

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUAUGGAA_G____CAGCCA__G_______	3'
		________U_ACAG______GU__CAGGGA
		________\|_\|\|\|.______\|\|__\|\|\|\|\|\|
		________A_UGUU______CA__GUCCCU
(miRNA)	3'	_________G____CAAUCC__GA______	5'

UTR3

6mer

3024-3041

0.00125799355589505

Position on chromosome:

7:22160880-22160897

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAUAAUCCAAC___C__CCAAAG_________	3'
		___________UAC_AG_________CAGGGA
		___________.\|\|_\|\|_________\|\|\|\|\|\|
		___________GUG_UC_________GUCCCU
(miRNA)	3'	__________A___U__AAUCCCAGA______	5'

UTR3

6mer

1021-1043

0.0012913688949061

Position on chromosome:

7:22158877-22158899

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAGUGC_____CUGCCUA___CA______	3'
		______UCACA_______GUC__CAGGGA
		______\|\|\|\|\|_______\|\|\|__\|\|\|\|\|\|
		______AGUGU_______CAG__GUCCCU
(miRNA)	3'	___________UCAAUCC___A_______	5'

UTR3

6mer

393-420

0.00615323825135547

Position on chromosome:

7:22158249-22158276

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	___G___A___A_AACCCGCCA______U	3'
		UUA_AAG_UAG_G_________UCAGGG_
		\|.\|_\|\|\|_\|\|\|_\|_________\|\|\|\|\|\|_
		AGU_UUC_AUC_C_________AGUCCC_
(miRNA)	3'	___G___A_____CAG____________U	5'

UTR3

9mer

371-396

0.113373767941527

Position on chromosome:

7:22158227-22158252

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUC____UGUCUACCUAACU_________	3'
		___AGGG_____________UCUCAGGGA
		___\|\|\|\|_____________\|\|\|\|\|\|\|\|\|
		___UCCC_____________AGAGUCCCU
(miRNA)	3'	__A__________________________	5'

ENSG00000132182 (NUP210)

hsa-miR-125b-5p

0.99896431745493

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1038-1058

0.114570959130609

Position on chromosome:

3:13358775-13358795

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	GGGUGAUG____UG_____U___________	3'
		________UUAC____UAG_GGUCUCAGGGA
		________\|.\|\|____\|\|\|_\|\|\|\|\|\|\|\|\|\|\|
		________AGUG____AUC_CCAGAGUCCCU
(miRNA)	3'	____________UUCA_______________	5'

UTR3

8mer

238-261

0.0106431013617289

Position on chromosome:

3:13357975-13357998

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAGG______GCU___CUACC________	3'
		_____C_CGAG___GGG_____CUCAGGGA
		_____\|_\|.\|\|___\|\|\|_____\|\|\|\|\|\|\|\|
		_____G_GUUC___CCC_____GAGUCCCU
(miRNA)	3'	____A_U____AAU___A____________	5'

UTR3

6mer

140-165

0.00195003778498773

Position on chromosome:

3:13357877-13357902

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CG______CUCCCUUCA___CU______C	3'
		__CACAAG_________GUC__UCAGGG_
		__\|\|\|\|\|\|_________\|\|\|__\|\|\|\|\|\|_
		__GUGUUC_________CAG__AGUCCC_
(miRNA)	3'	_A______AAUCC_______________U	5'

UTR3

7mer

2911-2935

0.00351430072068391

Position on chromosome:

3:13393461;13393580-13393480;13393584

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GGCA_______CAG__CUCCGCA_______	3'
		____UC_CAGG___AG_______UCAGGGA
		____\|\|_\|\|.\|___\|\|_______\|\|\|\|\|\|\|
		____AG_GUUC___UC_______AGUCCCU
(miRNA)	3'	______U____AA___CCAG__________	5'

UTR3

7mer

30-54

0.00872870311951298

Position on chromosome:

3:13359211-13359235

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGC______A_CC__CCCUCC_______C	3'
		___UCGCAA_G__AG______CUCAGGG_
		___\|\|.\|\|\|_\|__\|\|______\|\|\|\|\|\|\|_
		___AGUGUU_C__UC______GAGUCCC_
(miRNA)	3'	___________AA__CCA__________U	5'