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Please cite:
I. S. Vlachos, M. D. Paraskevopoulou, D. Karagkouni, G. Georgakilas, T. Vergoulis, I. Kanellos, I-L. Anastasopoulos, S. Maniou, K. Karathanou, D. Kalfakakou, A. Fevgas, T. Dalamagas and A. G. Hatzigeorgiou. DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucl. Acids Res. (2014)
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Prediction score
Filters
Selected:
Species: -
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Remove all 

Species

Method Type

Method

Regulation type

Validation type

Validated as

Source

Publication year
Prediction score
Gene name
miRNA name
Methods
Pred.Score
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103706-95103777 (UNKNOWN)
chimeric

CLASH
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN

Microarrays
POSITIVE

INDIRECT
Tarbase 7.0
DICER1 (hsa) 

hsa-let-7a-5p 


-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
chr14:95124471-95124499 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Abnova).Treatment protocol: treated with 1 μM hippuristanol for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Abnova).Treatment protocol: treated with 1 μM hippuristanol for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Santa Cruz).Treatment protocol: treated with 1 μM hippuristanol for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Santa Cruz).Treatment protocol: treated with 1 μM hippuristanol for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Sigma).Treatment protocol: treated with 1 μM hippuristanol for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95094106-95094127 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Abnova, antibody catalog #: H00027161-M01).Treatment protocol: treated with 1 mM sodium arsenite for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Abnova, antibody catalog #: H00027161-M01).Treatment protocol: treated with 1 mM sodium arsenite for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Abnova, antibody catalog #: H00027161-M01).Treatment protocol: treated with 1 mM sodium arsenite for 30 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103748-95103766 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Sigma).Treatment protocol: treated with 20 μg/mL emetine for 60 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Sigma).Treatment protocol: treated with 20 μg/mL emetine for 60 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95094106-95094127 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Santa Cruz).Treatment protocol: treated with 20 μg/mL emetine for 60 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95107889-95107911 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Santa Cruz).Treatment protocol: treated with 20 μg/mL emetine for 60 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation (antibody manufacturer: Sigma).Treatment protocol: treated with 20 μg/mL emetine for 60 minutes.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103640-95103661 (UNKNOWN)
Primary human umbilical vein endothelium. AGO2 immunoprecipitation using anti-Ago2 antibod 2A8

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation using anti-Ago2 antibod 2A8

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103640-95103661 (UNKNOWN)
AGO2 immunoprecipitation using anti-Ago2 antibod 2A8

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 immunoprecipitation using anti-Ago2 antibod 2A8

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103748-95103766 (UNKNOWN)
Primary human marrow stromal cells (MSS). AGO2 immunoprecipitation using anti-Ago2 antibod 2A8

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95089135-95089157 (UNKNOWN)
Primary effusion lymphoma cell line BC-1

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95103748-95103766 (UNKNOWN)
B cell lines infected by KSHV virus. AGO Immunoprecipitation using anti-Argonaute 2A8. 4 replicates available

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95087574-95087598 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. MNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95089135-95089157 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. MNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95094106-95094127 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. MNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. MNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103640-95103661 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. T1 RNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. MNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 PAR-CLIP, 2 replicates available. T1 RNase-treated samples

PAR-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95089135-95089157 (UNKNOWN)
AGO2 immunoprecipitation using anti-Ago2 antibody (Abcam AB57113). This antibody also recognizes Ago1 and Ago3. HIV-1 (strain: WT/BaL) infected Cervical Epithelial Cell Line, HeLa derivative. Length of infection (days): 3.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 immunoprecipitation using anti-Ago2 antibody (Abcam AB57113). This antibody also recognizes Ago1 and Ago3. HIV-1 (strain: WT/BaL) infected Cervical Epithelial Cell Line, HeLa derivative. Length of infection (days): 3.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95124471-95124499 (UNKNOWN)
AGO2 immunoprecipitation using anti-Ago2 antibody (Abcam AB57113). This antibody also recognizes Ago1 and Ago3. HIV-1 (strain: WT/BaL) infected Cervical Epithelial Cell Line, HeLa derivative. Length of infection (days): 3.

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
Location
Method
Result
Regulation
Valid. type
Source
chr14:95087574-95087598 (UNKNOWN)
AGO2 immunoprecipitation with anti-AGO2 mAb, clone 2E12-1C9(Abnova) antibody

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
chr14:95103748-95103766 (UNKNOWN)
AGO2 immunoprecipitation with anti-AGO2 mAb, clone 2E12-1C9(Abnova) antibody

HITS-CLIP
POSITIVE

DIRECT
Tarbase 7.0
DICER1 (hsa) 

hsa-let-7a-5p 


-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
CLASH

Other
UNKNOWN

UNKNOWN
miRTarBase
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN
Luciferase reporter assay//Western blot//Northern blot

Other
UNKNOWN

UNKNOWN
miRTarBase
DICER1 (hsa) 

hsa-let-7a-5p 


-
Publication
Methods
Tissue
Cell line
Tested cell line
Exp. condition
Location
Method
Result
Regulation
Valid. type
Source
UNKNOWN

PAR-CLIP
POSITIVE

DIRECT
TarBase 6.0

