DIANA TOOLS - MicroT-CDS

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Results: 170 targets for miRNAs hsa-miR-125a-3p

. Threshold is set to 0.7.

Name:	hsa-miR-125a-3p
Alternative description:	MIMAT0004602
Related names:
miRNA sequence:	acaggugagguucuugggagcc
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Alzheimer Disease Anemia, Sickle Cell Aortic Valve Stenosis Asthma Atherosclerosis Bites and Stings Body Weight Bone Neoplasms Brain Neoplasms Breast Neoplasms Breast Neoplasms, Male Carcinoma Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Pancreatic Ductal Carcinoma, Squamous Cell Carcinoma, Transitional Cell Cardiomyopathy, Hypertrophic Cell Transformation, Neoplastic Cerebellar Neoplasms Colonic Neoplasms Colorectal Neoplasms Cystadenocarcinoma, Serous Dermatitis, Atopic Diabetes Mellitus, Type 2 Disease Disease Models, Animal Disease Progression Echinococcosis Endometriosis Facial Neoplasms Fibrosis Glioblastoma Glioma Heart Diseases Hematologic Neoplasms Hepatitis C, Chronic Huntington Disease Hyperglycemia Hyperinsulinism Hypertrophy Inflammation Influenza in Birds Ischemia Leiomyoma Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myeloid, Acute Listeriosis Liver Neoplasms Lung Neoplasms Lupus Nephritis Lymphatic Metastasis Lymphoma, Large B-Cell, Diffuse Marek Disease Medulloblastoma Melanoma Mouth Neoplasms Multiple Myeloma Multiple Sclerosis Muscle Neoplasms Myocardial Infarction Myocardial Reperfusion Injury Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Neoplasms, Germ Cell and Embryonal Nerve Degeneration Nerve Sheath Neoplasms Neuralgia Neuroblastoma Obesity Ovarian Neoplasms Pancreatic Neoplasms Pancreatitis, Chronic Poultry Diseases Precursor Cell Lymphoblastic Leukemia-Lymphoma Prostatic Neoplasms Psoriasis Recurrence Sarcoma, Kaposi Stomach Neoplasms Thyroid Neoplasms Urinary Bladder Neoplasms Uterine Cervical Neoplasms Uterine Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000066855 (MTFR1)

hsa-miR-125a-3p

0.97286667503053

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1334-1348

0.0399840470458074

Position on chromosome:

8:66622614-66622628

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUGUUCAUGUUCAC____________________	3'
		______________CUCUCA_____UUCACCUGU
		______________\|\|\|.\|\|_____.\|\|\|\|\|\|\|\|
		______________GAGGGU_____GAGUGGACA
(miRNA)	3'	_____________C______UCUUG_________	5'

UTR3

7mer

1380-1396

0.0292246438180689

Position on chromosome:

8:66622660-66622676

Conserved species:

panTro2,rn4,bosTau4,echTel1

Binding area:

(Transcript)	5'	CUUUAACAAAA_____A__A________A	3'
		___________UUCAG_AA_UUCACCUG_
		___________..\|\|._\|\|_.\|\|\|\|\|\|\|_
		___________GGGUU_UU_GAGUGGAC_
(miRNA)	3'	__________A_____C__G________A	5'

ENSG00000170091 (NSG2)

hsa-miR-125a-3p

0.960060389733879

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

762-787

0.00192796593306088

Position on chromosome:

5:173535271-173535296

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UU____G__UUUUCU___U__A______G	3'
		__GCUU_CA______AGA_CC_CACCUG_
		__\|\|\|._\|\|______\|\|\|_\|\|_\|\|\|\|\|\|_
		__CGAG_GU______UCU_GG_GUGGAC_
(miRNA)	3'	_C____G___________U__A______A	5'

UTR3

6mer

892-911

0.00163597593072099

Position on chromosome:

5:173535401-173535420

Conserved species:

panTro2,rn4

Binding area:

(Transcript)	5'	GGCCACAA__GA_____C__AGG______A	3'
		________GC___UAAG_AC___CACCUG_
		________\|\|___.\|\|\|_\|\|___\|\|\|\|\|\|_
		________CG___GUUC_UG___GUGGAC_
(miRNA)	3'	_______C__AGG____U__GA_______A	5'

UTR3

8mer

1478-1502

0.0591095102415814

Position on chromosome:

5:173535987-173536011

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	CCAA_C_____UC___CUGAG________	3'
		____C_UCCAA__ACC_____UCACCUGU
		____\|_.\|\|\|\|__\|\|\|_____\|\|\|\|\|\|\|\|
		____G_GGGUU__UGG_____AGUGGACA
(miRNA)	3'	___C_A_____CU________________	5'

ENSG00000138650 (PCDH10)

hsa-miR-125a-3p

0.951761684077082

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

461-475

0.0236274700327232

Position on chromosome:

4:134111777-134111791

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAAAUUGUGAUUAU_____________________	3'
		______________GUUCU______UUUCACCUGU
		______________\|.\|\|.______..\|\|\|\|\|\|\|\|
		______________CGAGG______GGAGUGGACA
(miRNA)	3'	_____________C_____GUUCUU__________	5'

UTR3

8mer

969-997

0.0340939537193176

Position on chromosome:

4:134112285-134112313

Conserved species:

panTro2,rheMac2,rn4,oryCun2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	_____AUA_______GAUAAAU________	3'
		_UUUU___AAGAAUC_______UCACCUGU
		_.\|..___\|\|\|\|\|.\|_______\|\|\|\|\|\|\|\|
		_GAGG___UUCUUGG_______AGUGGACA
(miRNA)	3'	C____G________________________	5'

UTR3

6mer

1608-1630

0.00172464432147561

Position on chromosome:

4:134112924-134112946

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUUUG_____UUCAAA__AGAA______	3'
		______CCCAG______UU____ACCUGU
		______\|\|\|\|.______.\|____\|\|\|\|\|\|
		______GGGUU______GA____UGGACA
(miRNA)	3'	_____A_____CUUG____G_________	5'

ENSG00000114739 (ACVR2B)

hsa-miR-125a-3p

0.951157609501105

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3707-3734

0.00063609211031043

Position on chromosome:

3:38528531-38528558

Conserved species:

panTro2

Binding area:

(Transcript)	5'	____GUG_UU_____AAAG_GA______G	3'
		GGCU___C__AGGAG____U__CACCUG_
		\|\|\|\|___\|__\|.\|\|.____.__\|\|\|\|\|\|_
		CCGA___G__UUCUU____G__GUGGAC_
(miRNA)	3'	________GG__________GA______A	5'

UTR3

6mer

6895-6919

0.000938700536551268

Position on chromosome:

3:38531719-38531743

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAG________C__AGCUGAAG______	3'
		____UCCUGAGG_CC________ACCUGU
		____\|\|\|..\|\|._\|\|________\|\|\|\|\|\|
		____AGGGUUCU_GG________UGGACA
(miRNA)	3'	___G________U__AG____________	5'

UTR3

8mer

8628-8644

0.0396369826098858

Position on chromosome:

3:38533452-38533468

Conserved species:

panTro2,rheMac2,canFam2,galGal3

Binding area:

(Transcript)	5'	UAGUGUCAAAGG_____UU__________	3'
		____________CCAAG__UUUCACCUGU
		____________\|\|\|\|\|__..\|\|\|\|\|\|\|\|
		____________GGUUC__GGAGUGGACA
(miRNA)	3'	___________G_____UU__________	5'

UTR3

8mer

9023-9038

0.0180205164909337

Position on chromosome:

3:38533847-38533862

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AUUGUAAUUAAAA_____________________	3'
		_____________GUUU___GGG__UUCACCUGU
		_____________\|.\|.___.\|.__.\|\|\|\|\|\|\|\|
		_____________CGAG___UCU__GAGUGGACA
(miRNA)	3'	____________C____GGU___UG_________	5'

ENSG00000157890 (MEGF11)

hsa-miR-125a-3p

0.933906422366222

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3340-3358

0.00921822749970069

Position on chromosome:

15:66207848-66207866

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CCACCUGUGA___UGUC___GG_______	3'
		__________CCA____ACC__CACCUGU
		__________\|\|\|____\|\|\|__\|\|\|\|\|\|\|
		__________GGU____UGG__GUGGACA
(miRNA)	3'	_________G___UCU____A________	5'

UTR3

6mer

3099-3124

0.00206804327767323

Position on chromosome:

15:66206111-66206136

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	CU_______CGU_UCU___ACA______C	3'
		__GGCUCCC___G___CCU___CACCUG_
		__\|\|\|\|\|\|\|___\|___\|\|\|___\|\|\|\|\|\|_
		__CCGAGGG___C___GGA___GUGGAC_
(miRNA)	3'	_________UU__UU_____________A	5'

UTR3

8mer

2909-2929

0.0265006506405333

Position on chromosome:

15:66191176-66191196

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CAAUUAA__A_____CCCAU_________C	3'
		_______GG__CCCA_____CCUCACCUG_
		_______\|\|__\|\|\|\|_____\|\|\|\|\|\|\|\|\|_
		_______CC__GGGU_____GGAGUGGAC_
(miRNA)	3'	_________GA____UCUU__________A	5'

UTR3

7mer

2512-2539

0.0107019724277328

Position on chromosome:

15:66190146-66190173

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,echTel1

Binding area:

(Transcript)	5'	____G_AUGUU__UUAUU__G________G	3'
		_GCU_C_____AG_____AC_UUCACCUG_
		_\|\|\|_\|_____\|\|_____\|\|_.\|\|\|\|\|\|\|_
		_CGA_G_____UC_____UG_GAGUGGAC_
(miRNA)	3'	C___G_GU_____U_______________A	5'

UTR3

6mer

2235-2260

0.00334734704731497

Position on chromosome:

15:66189869-66189894

Conserved species:

panTro2,bosTau4,dasNov2

Binding area:

(Transcript)	5'	AG__AA_______AUU____UAAAG______A	3'
		__GG_____GAGG___ACUU_____CACCUG_
		__\|\|_____.\|\|.___\|\|.\|_____\|\|\|\|\|\|_
		__CC_____UUCU___UGGA_____GUGGAC_
(miRNA)	3'	____GAGGG______________________A	5'

UTR3

6mer

1834-1853

0.00215329542021573

Position on chromosome:

15:66189468-66189487

Conserved species:

panTro2,rheMac2,rn4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	CAUAUCUA__UAG____U_____GA______A	3'
		________CU___UCCA____CC__CACCUG_
		________\|\|___.\|\|\|____\|\|__\|\|\|\|\|\|_
		________GA___GGGU____GG__GUGGAC_
(miRNA)	3'	_______C_________UCUU__A_______A	5'

ENSG00000058866 (DGKG)

hsa-miR-125a-3p

0.924193530940858

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2115-2136

0.00542526518503383

Position on chromosome:

3:185867105-185867126

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	UUUAUU___UU__U_____GUGAA______G	3'
		______UUC__AG___UCU_____CACCUG_
		______.\|\|__\|.___.\|\|_____\|\|\|\|\|\|_
		______GAG__UU___GGA_____GUGGAC_
(miRNA)	3'	_____C___GG__CUU______________A	5'

UTR3

6mer

712-729

0.00291158144294613

Position on chromosome:

3:185865702-185865719

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CUAAGUAAGG__AAAA_____C__________A	3'
		__________GG____CCAGG_____CACCUG_
		__________\|\|____\|\|\|.\|_____\|\|\|\|\|\|_
		__________CC____GGUUC_____GUGGAC_
(miRNA)	3'	____________GAG______UUGGA______A	5'

UTR3

8mer

47-68

0.0432408653560837

Position on chromosome:

3:185865037-185865058

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GGCCAU___ACAAA__UGU__________C	3'
		______GCU_____CA____UCUCACCUG_
		______\|\|\|_____\|\|____.\|\|\|\|\|\|\|\|_
		______CGA_____GU____GGAGUGGAC_
(miRNA)	3'	_____C___GG_____UCUU_________A	5'

ENSG00000048540 (LMO3)

hsa-miR-125a-3p

0.923724636170921

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2936-2963

0.00910066350685129

Position on chromosome:

12:16713379-16713406

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,galGal3,fr2

Binding area:

(Transcript)	5'	___G_G________AAUGUUUAC______G	3'
		_GC_U_CCAAGGAC_________CACCUG_
		_\|\|_\|_\|\|\|\|\|.\|\|_________\|\|\|\|\|\|_
		_CG_A_GGUUCUUG_________GUGGAC_
(miRNA)	3'	C____G________GA_____________A	5'

UTR3

8mer

433-455

0.037568783882417

Position on chromosome:

12:16701791-16701813

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UUUUA__ACAAA___AAUUA________G	3'
		_____CU_____CAA_____CUCACCUG_
		_____\|\|_____\|\|\|_____\|\|\|\|\|\|\|\|_
		_____GA_____GUU_____GAGUGGAC_
(miRNA)	3'	____C__GG______CUUG_________A	5'

UTR3

6mer

52-69

0.00479918748997404

Position on chromosome:

12:16701410-16701427

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAGAGUGCUGA____AA________G______	3'
		___________GUUU__AAG___UU_ACCUGU
		___________\|.\|.__\|\|\|___.\|_\|\|\|\|\|\|
		___________CGAG__UUC___GA_UGGACA
(miRNA)	3'	__________C____GG___UUG__G______	5'

ENSG00000105854 (PON2)

hsa-miR-125a-3p

0.91636199994286

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

368-385

0.049831780223802

Position on chromosome:

7:95039220-95039237

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	UCAGCAAAUG__A______U___________A	3'
		__________GG___UCAA__AUUUCACCUG_
		__________\|\|___.\|\|\|__\|..\|\|\|\|\|\|\|_
		__________CC___GGUU__UGGAGUGGAC_
(miRNA)	3'	____________GAG____CU__________A	5'

ENSG00000100811 (YY1)

hsa-miR-125a-3p

0.907658479721286

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

334-359

0.0383213538604823

Position on chromosome:

14:100744272-100744297

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	ACA___UU_UAAAUAU___G_________	3'
		___UUC__A_______GAA_CUCACCUGU
		___.\|\|__\|_______\|\|\|_\|\|\|\|\|\|\|\|\|
		___GAG__U_______CUU_GAGUGGACA
(miRNA)	3'	__C___GG_U_________G_________	5'

UTR3

6mer

799-813

0.00661887929225422

Position on chromosome:

14:100744737-100744751

Conserved species:

panTro2,rheMac2,rn4,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	UAGAAUGUAUUGU____UUUAA______A	3'
		_____________ACCU_____CACCUG_
		_____________\|\|\|\|_____\|\|\|\|\|\|_
		_____________UGGA_____GUGGAC_
(miRNA)	3'	____________U_______________A	5'

UTR3

6mer

1211-1224

0.00101549648907648

Position on chromosome:

14:100745149-100745162

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GCGCCUGCGCAGGG_____UG________G	3'
		______________UAAGG__C_CACCUG_
		______________.\|\|\|.__\|_\|\|\|\|\|\|_
		______________GUUCU__G_GUGGAC_
(miRNA)	3'	_____________G_____UG_A______A	5'

UTR3

6mer

3073-3101

0.000816703254379877

Position on chromosome:

14:100747011-100747039

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	_____A_____UAGUGUGC__AA_______	3'
		_UUUC_CAGGA________GC__UACCUGU
		_.\|.\|_\|\|.\|\|________.\|__.\|\|\|\|\|\|
		_GAGG_GUUCU________UG__GUGGACA
(miRNA)	3'	C____________________GA_______	5'

UTR3

7mer

3827-3845

0.00128538780360063

Position on chromosome:

14:100747765-100747783

Conserved species:

panTro2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	UUGGACCCUC____G_______G_________	3'
		__________GGCU_U_AGGGG___CACCUGU
		__________\|\|\|\|_._\|.\|..___\|\|\|\|\|\|\|
		__________CCGA_G_UUCUU___GUGGACA
(miRNA)	3'	______________G_G_____GGA_______	5'

ENSG00000197892 (KIF13B)

hsa-miR-125a-3p

0.907627414228187

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2534-2551

0.003378877172528

Position on chromosome:

8:28927330-28927347

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	UGGAUGUUUU___A____U_____________G	3'
		__________GGC_UCUU_AGA____CACCUG_
		__________\|\|\|_\|\|.._\|\|\|____\|\|\|\|\|\|_
		__________CCG_AGGG_UCU____GUGGAC_
(miRNA)	3'	__________________U___UGGA______A	5'

UTR3

7mer

1571-1589

0.00113041636909719

Position on chromosome:

8:28926367-28926385

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CGAUUUUGAG__AA___U_____GG_______	3'
		__________GG__CCC____GU__CACCUGU
		__________\|\|__\|\|\|____..__\|\|\|\|\|\|\|
		__________CC__GGG____UG__GUGGACA
(miRNA)	3'	____________GA___UUCU__GA_______	5'

UTR3

6mer

1488-1508

0.00101716578058598

Position on chromosome:

8:28926284-28926304

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGCACAGC_______UU______AAA______	3'
		________GGCUUUC_____UUU___ACCUGU
		________\|\|\|\|..\|_____..\|___\|\|\|\|\|\|
		________CCGAGGG_____GGA___UGGACA
(miRNA)	3'	_______________UUCUU___G________	5'

UTR3

7mer

74-98

0.0226712416045651

Position on chromosome:

8:28924870-28924894

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UGUA___UGUAAU_____AAAC_______	3'
		____UCA______GAACU____CACCUGU
		____.\|\|______\|\|\|\|.____\|\|\|\|\|\|\|
		____GGU______CUUGG____GUGGACA
(miRNA)	3'	___G___U__________A__________	5'

UTR3

8mer

1-14

0.0198540628762134

Position on chromosome:

8:28924797-28924810

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCAAUAAAACCAGA___UU___________C	3'
		______________CCA____UCUCACCUG_
		______________\|\|\|____.\|\|\|\|\|\|\|\|_
		______________GGU____GGAGUGGAC_
(miRNA)	3'	_____________G___UCUU_________A	5'

ENSG00000160551 (TAOK1)

hsa-miR-125a-3p

0.906692252860833

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

481-504

0.00383627982698399

Position on chromosome:

17:27870522-27870545

Conserved species:

panTro2,rheMac2,canFam2,dasNov2

Binding area:

(Transcript)	5'	GAAA____UUAUU___GGUACA______C	3'
		____UAAG_____ACU______CACCUG_
		____.\|\|\|_____\|\|.______\|\|\|\|\|\|_
		____GUUC_____UGG______GUGGAC_
(miRNA)	3'	___G____U_______A___________A	5'

UTR3

9mer

1941-1962

0.00542152979480456

Position on chromosome:

17:27871982-27872003

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CAGUCGA___G___U___U__________	3'
		_______GUU_CCA_GAA_CCUCACCUGU
		_______\|.\|_\|\|\|_\|\|\|_\|\|\|\|\|\|\|\|\|\|
		_______CGA_GGU_CUU_GGAGUGGACA
(miRNA)	3'	______C___G___U______________	5'

UTR3

8mer

3495-3521

0.0155462427576651

Position on chromosome:

17:27873536-27873562

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CU__AAUAAUA___UUUAU__________	3'
		__GG_______CUA_____UUUCACCUGU
		__\|\|_______\|.\|_____..\|\|\|\|\|\|\|\|
		__CC_______GGU_____GGAGUGGACA
(miRNA)	3'	____GAG_______UCUU___________	5'

UTR3

7mer

8028-8053

0.00818970586546179

Position on chromosome:

17:27878069-27878094

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AGA___UUG__CGAUGA_UG_A_______	3'
		___CCA___AG______A__C_CACCUGU
		___\|\|\|___\|\|______\|__\|_\|\|\|\|\|\|\|
		___GGU___UC______U__G_GUGGACA
(miRNA)	3'	__G_______________UG_A_______	5'

UTR3

6mer

8693-8720

0.0129654208424933

Position on chromosome:

17:27878734-27878761

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	G__U_______AUAGUUCAUAUAUA______	3'
		_CA___ACCUU______________ACCUGU
		_\|\|___\|\|\|\|.______________\|\|\|\|\|\|
		_GU___UGGAG______________UGGACA
(miRNA)	3'	G__UCU_________________________	5'

UTR3

7mer

516-534

0.00699545611024875

Position on chromosome:

17:27807453-27807471

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUUGGCUCU_______U__CA________C	3'
		_________GCUUCCA_GG___UCACCUG_
		_________\|\|\|.\|\|\|_\|.___\|\|\|\|\|\|\|_
		_________CGAGGGU_CU___AGUGGAC_
(miRNA)	3'	________C_______U__UGG_______A	5'

UTR3

7mer

2214-2231

0.0128159779955272

Position on chromosome:

17:27857491-27857508

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	ACAGUACAAA__A________A________C	3'
		__________GC__UUAAGAA__UCACCUG_
		__________\|\|__..\|\|\|\|\|__\|\|\|\|\|\|\|_
		__________CG__GGUUCUU__AGUGGAC_
(miRNA)	3'	_________C__AG_______GG_______A	5'

ENSG00000198478 (SH3BGRL2)

hsa-miR-125a-3p

0.903193431544016

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

226-242

0.0272449341449345

Position on chromosome:

6:80409453-80409469

Conserved species:

panTro2,rn4,mm9,echTel1

Binding area:

(Transcript)	5'	AUUUGCCUGCA___G__UCA___________G	3'
		___________GUU_CC______CUCACCUG_
		___________\|.\|_\|\|______\|\|\|\|\|\|\|\|_
		___________CGA_GG______GAGUGGAC_
(miRNA)	3'	__________C___G__UUCUUG________A	5'

UTR3

8mer

235-259

0.015703504192081

Position on chromosome:

6:80409462-80409486

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	CUCA___A__UG__AAU___G________	3'
		____CUC_CC__GA___ACC_UCACCUGU
		____\|\|\|_\|\|__\|\|___\|\|\|_\|\|\|\|\|\|\|\|
		____GAG_GG__CU___UGG_AGUGGACA
(miRNA)	3'	___C______UU_________________	5'

UTR3

6mer

509-534

0.00425700597083505

Position on chromosome:

6:80409736-80409761

Conserved species:

panTro2,rheMac2,echTel1

Binding area:

(Transcript)	5'	CA_______U______UGUAAUAA______G	3'
		__GUUCCCA___GCUU________CACCUG_
		__\|.\|\|\|\|\|___.\|.\|________\|\|\|\|\|\|_
		__CGAGGGU___UGGA________GUGGAC_
(miRNA)	3'	_C_______UCU__________________A	5'

ENSG00000242110 (AMACR)

hsa-miR-125a-3p

0.901544943599446

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2373-2396

0.0302046679338145

Position on chromosome:

5:33988656-33988679

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UGUAA___G_A_____AAG__________	3'
		_____UUU_C_AAGAA___UUUCACCUGU
		_____.\|._\|_\|\|\|\|\|___..\|\|\|\|\|\|\|\|
		_____GAG_G_UUCUU___GGAGUGGACA
(miRNA)	3'	____C___G____________________	5'

UTR3

6mer

2054-2077

0.00195266668484357

Position on chromosome:

5:33988337-33988360

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUUAA___A_____CCUU___UA_______	3'
		_____GUU__CAAG____UCU__UACCUGU
		_____\|.\|__\|\|\|\|____.\|\|__.\|\|\|\|\|\|
		_____CGA__GUUC____GGA__GUGGACA
(miRNA)	3'	____C___GG____UU______________	5'

UTR3

8mer

1523-1541

0.00917949282133185

Position on chromosome:

5:33987806-33987824

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAUUGGACA__G_G___CU__________G	3'
		_________CU_U_CAA___UCUCACCUG_
		_________\|\|_._\|\|\|___.\|\|\|\|\|\|\|\|_
		_________GA_G_GUU___GGAGUGGAC_
(miRNA)	3'	________C__G_____CUU_________A	5'

UTR3

6mer

861-885

0.00212066883993543

Position on chromosome:

5:33987144-33987168

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CUAG____GGCAAC_____AAGA______	3'
		____CCCA______AGAAC____ACCUGU
		____\|\|\|\|______\|\|\|\|\|____\|\|\|\|\|\|
		____GGGU______UCUUG____UGGACA
(miRNA)	3'	___A_______________GAG_______	5'

UTR3

6mer

230-258

0.00344211741103974

Position on chromosome:

5:33986513-33986541

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	__AUA___UAAU____AAAACAG______	3'
		GG___CCA____GAAC_______ACCUGU
		\|\|___\|\|\|____\|\|\|\|_______\|\|\|\|\|\|
		CC___GGU____CUUG_______UGGACA
(miRNA)	3'	__GAG___U_______GAG__________	5'

ENSG00000125434 (SLC25A35)

hsa-miR-125a-3p

0.899008238616867

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer+wobble

1708-1732

0.0109126659615969

Position on chromosome:

17:8192790-8192814

Conserved species:

panTro2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	AGG__A__AGAG______UG________G	3'
		___GG_UC____UCAGGA__CUUACCUG_
		___\|\|_\|\|____.\|\|.\|\|__\|\|.\|\|\|\|\|_
		___CC_AG____GGUUCU__GAGUGGAC_
(miRNA)	3'	_____G____________UG________A	5'

UTR3

8mer

1648-1665

0.0282181803280715

Position on chromosome:

17:8192730-8192747

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	ACAUUACACA________C__________C	3'
		__________CUCUCGGG__CCUCACCUG_
		__________\|\|\|.\|..\|__\|\|\|\|\|\|\|\|\|_
		__________GAGGGUUC__GGAGUGGAC_
(miRNA)	3'	_________C________UU_________A	5'

UTR3

6mer

39-58

0.00730694496900928

Position on chromosome:

17:8191121-8191140

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	CAACCCCA_C_____CU___ACA______G	3'
		________C_CCCAG___CC___CACCUG_
		________\|_\|\|\|\|.___\|\|___\|\|\|\|\|\|_
		________G_GGGUU___GG___GUGGAC_
(miRNA)	3'	_______C_A_____CUU__A________A	5'

ENSG00000164054 (SHISA5)

hsa-miR-125a-3p

0.897955256279791

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1918-1937

0.00674459039793008

Position on chromosome:

3:48540569-48540588

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAGACCUU___G_AUAU_____________A	3'
		________GCU_C____GGG__UUCACCUG_
		________\|\|\|_\|____.\|.__.\|\|\|\|\|\|\|_
		________CGA_G____UCU__GAGUGGAC_
(miRNA)	3'	_______C___G_GU_____UG________A	5'

UTR3

6mer

1797-1821

0.00326071611988497

Position on chromosome:

3:48538647-48538671

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	CCUG_____AUU___GCUGUGG_______	3'
		____UCCAG___UCU_______UACCUGU
		____.\|\|\|.___.\|\|_______.\|\|\|\|\|\|
		____GGGUU___GGA_______GUGGACA
(miRNA)	3'	___A_____CUU_________________	5'

UTR3

7mer

1564-1585

0.0122540409095067

Position on chromosome:

3:48511168-48511189

Conserved species:

panTro2,rheMac2,mm9,oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UCGUCA__AUCA___UCU__________C	3'
		______CU____UCA___GCUUCACCUG_
		______\|\|____.\|\|___.\|.\|\|\|\|\|\|\|_
		______GA____GGU___UGGAGUGGAC_
(miRNA)	3'	_____C__G______UCU__________A	5'

UTR3

8mer

995-1011

0.019381394574245

Position on chromosome:

3:48510271-48510287

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GACCAGACUUU______UU____________A	3'
		___________GUUCUC_____CCUCACCUG_
		___________\|.\|\|.\|_____\|\|\|\|\|\|\|\|\|_
		___________CGAGGG_____GGAGUGGAC_
(miRNA)	3'	__________C______UUCUU_________A	5'

UTR3

6mer

567-593

0.00175411412115385

Position on chromosome:

3:48509843-48509869

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CA___AGAG___UACUC____G_______	3'
		__GGC____CCC_____AGCU_UACCUGU
		__\|\|\|____\|\|\|_____\|.\|._.\|\|\|\|\|\|
		__CCG____GGG_____UUGG_GUGGACA
(miRNA)	3'	_____A______UUC______A_______	5'

UTR3

6mer

185-201

0.00285425411376979

Position on chromosome:

3:48509461-48509477

Conserved species:

panTro2,rheMac2,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	CACGGUGUUCU___AG________________G	3'
		___________GGC___CAGGGA___CACCUG_
		___________\|\|\|___\|\|.\|.\|___\|\|\|\|\|\|_
		___________CCG___GUUCUU___GUGGAC_
(miRNA)	3'	______________AGG______GGA______A	5'

ENSG00000168264 (IRF2BP2)

hsa-miR-125a-3p

0.891308135439574

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1717-1742

0.00338964554517506

Position on chromosome:

1:234741732-234741757

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CAG____AAUGUGGGUGG____A_________	3'
		___CCCA___________AGGA____ACCUGU
		___\|\|\|\|___________\|\|.\|____\|\|\|\|\|\|
		___GGGU___________UCUU____UGGACA
(miRNA)	3'	__A___________________GGAG______	5'

UTR3

7mer

82-100

0.0417066342192819

Position on chromosome:

1:234740097-234740115

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAAAAUCAC___AU______AUA_______A	3'
		_________GCU____GGAA___UCACCUG_
		_________\|\|\|____.\|\|\|___\|\|\|\|\|\|\|_
		_________CGA____UCUU___AGUGGAC_
(miRNA)	3'	________C___GGGU____GG________A	5'

ENSG00000131711 (MAP1B)

hsa-miR-125a-3p

0.885042547338308

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1125-1144

0.00246089798134064

Position on chromosome:

5:71502192-71502211

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3

Binding area:

(Transcript)	5'	CGUGUUGAA_____CUUC__UG__________	3'
		_________UCCCA____AG_____CACCUGU
		_________\|\|\|\|\|____\|\|_____\|\|\|\|\|\|\|
		_________AGGGU____UC_____GUGGACA
(miRNA)	3'	________G___________UUGGA_______	5'

UTR3

8mer

3587-3604

0.0117932568710822

Position on chromosome:

5:71504654-71504671

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GCUUUUCUUGC_____UUU______________	3'
		___________CUCUC___AG____UCACCUGU
		___________\|\|\|.\|___\|\|____\|\|\|\|\|\|\|\|
		___________GAGGG___UC____AGUGGACA
(miRNA)	3'	__________C_____U____UUGG________	5'

UTR3

7mer

3782-3801

0.0271188119875041

Position on chromosome:

5:71504849-71504868

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CUUUGAAA__AA_____UUA________G	3'
		________GC__UUAGG___UUCACCUG_
		________\|\|__..\|.\|___.\|\|\|\|\|\|\|_
		________CG__GGUUC___GAGUGGAC_
(miRNA)	3'	_______C__AG_____UUG________A	5'

UTR3

8mer

6754-6772

0.0222390890936565

Position on chromosome:

5:71495937-71495955

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GGUACAAAGA_____UCAU__________	3'
		__________CCAAG____CUUCACCUGU
		__________\|\|\|\|\|____\|.\|\|\|\|\|\|\|\|
		__________GGUUC____GGAGUGGACA
(miRNA)	3'	_________G_____UU____________	5'

ENSG00000157106 (SMG1)

hsa-miR-125a-3p

0.883843021943627

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

4355-4368

0.00799940125569426

Position on chromosome:

16:18820530-18820543

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AGAGUGAUUUGGAA____AU_____________A	3'
		______________CUCC______UC_CACCUG_
		______________\|\|\|\|______.\|_\|\|\|\|\|\|_
		______________GAGG______GG_GUGGAC_
(miRNA)	3'	_____________C____GUUCUU__A______A	5'

UTR3

6mer

1951-1969

0.00315330270292887

Position on chromosome:

16:18818126-18818144

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	AAGUCAUACA___UU__U__AA________	3'
		__________UUU__GA_AA___UACCUGU
		__________.\|.__.\|_\|\|___.\|\|\|\|\|\|
		__________GAG__UU_UU___GUGGACA
(miRNA)	3'	_________C___GG__C__GGA_______	5'

UTR3

8mer+mismatch

1927-1950

0.000369166988543829

Position on chromosome:

16:18818102-18818125

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCUGU__AAAA_______U____U_____	3'
		_____GG____CCAGGGA_CCUC_CCUGU
		_____\|\|____\|\|\|.\|.\|_\|\|\|\|_\|\|\|\|\|
		_____CC____GGUUCUU_GGAG_GGACA
(miRNA)	3'	_______GAG_____________U_____	5'

UTR3

7mer

340-360

0.0226485162172051

Position on chromosome:

16:18816515-18816535

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUUUAAAU_____UUAU____C_______	3'
		________UUCCC____AUUU_CACCUGU
		________.\|\|\|\|____\|..\|_\|\|\|\|\|\|\|
		________GAGGG____UGGA_GUGGACA
(miRNA)	3'	_______C_____UUCU____________	5'

UTR3

6mer

39-63

0.00704286856827278

Position on chromosome:

16:18816214-18816238

Conserved species:

panTro2,rheMac2,rn4,mm9,loxAfr3

Binding area:

(Transcript)	5'	ACAU___A_______UUGUAUGAAA_______	3'
		____GGC____AAGA__________UACCUGU
		____\|\|\|____\|\|\|\|__________.\|\|\|\|\|\|
		____CCG____UUCU__________GUGGACA
(miRNA)	3'	_______AGGG____UGGA_____________	5'

UTR3

8mer

6164-6192

0.0168131843311473

Position on chromosome:

16:18863731-18863759

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	_____AUUUU_____AGUUGUA________	3'
		_CUUC_____GGGAC_______UCACCUGU
		_\|\|.\|_____.\|.\|\|_______\|\|\|\|\|\|\|\|
		_GAGG_____UCUUG_______AGUGGACA
(miRNA)	3'	C____GU________G______________	5'

UTR3

7mer

2536-2550

0.00500629668485506

Position on chromosome:

16:18845641-18845655

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UCUGCAGUAUGAG___A___G_______C	3'
		_____________CGG_AAC_UCACCUG_
		_____________\|.._\|\|\|_\|\|\|\|\|\|\|_
		_____________GUU_UUG_AGUGGAC_
(miRNA)	3'	____________G___C___G_______A	5'

ENSG00000196400 (BX255923.1)

hsa-miR-125a-3p

0.881487026961375

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

386-410

0.0435013489156097

Position on chromosome:

9:69253669-69253693

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UAU____G_ACAGUA_______________A	3'
		___GGCU_U______UAAGAA__UCACCUG_
		___\|\|\|\|_.______.\|\|\|\|\|__\|\|\|\|\|\|\|_
		___CCGA_G______GUUCUU__AGUGGAC_
(miRNA)	3'	_______G_____________GG_______A	5'

ENSG00000131507 (NDFIP1)

hsa-miR-125a-3p

0.880613777023454

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

41-65

0.00788000696000184

Position on chromosome:

5:141531335-141531359

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UCU__________G_AAGAGAA______C	3'
		___CUCUCAAGAA_C_______CACCUG_
		___\|\|\|.\|\|\|\|\|\|_\|_______\|\|\|\|\|\|_
		___GAGGGUUCUU_G_______GUGGAC_
(miRNA)	3'	__C__________G_A____________A	5'

UTR3

7mer

90-109

0.0307016387650622

Position on chromosome:

5:141531384-141531403

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUGCAGAA_ACA_____AUAA_______C	3'
		________C___GAGGA____UCACCUG_
		________\|___.\|\|.\|____\|\|\|\|\|\|\|_
		________G___UUCUU____AGUGGAC_
(miRNA)	3'	_______A_GG______GG_________A	5'

UTR3

6mer

505-521

0.00478351684159716

Position on chromosome:

5:141531799-141531815

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,monDom5

Binding area:

(Transcript)	5'	AAUUUAUUCAA____GU_U____________G	3'
		___________UUCU__A_GAA___CACCUG_
		___________.\|\|.__\|_\|\|\|___\|\|\|\|\|\|_
		___________GAGG__U_CUU___GUGGAC_
(miRNA)	3'	__________C____GU_____GGA______A	5'

ENSG00000010292 (NCAPD2)

hsa-miR-125a-3p

0.879489446360114

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

223-247

0.00712945012963158

Position on chromosome:

12:6620360-6620384

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	GCUA____AGUU___CAU__G________	3'
		____CUUC____GGA___CC_UCACCUGU
		____\|\|.\|____.\|\|___\|\|_\|\|\|\|\|\|\|\|
		____GAGG____UCU___GG_AGUGGACA
(miRNA)	3'	___C____GU_____U_____________	5'

UTR3

6mer

350-372

0.00740408994018339

Position on chromosome:

12:6623499-6623521

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,fr2

Binding area:

(Transcript)	5'	CCCCA________G__AUAACA______C	3'
		_____CUCGGGAA_CC______CACCUG_
		_____\|.\|..\|\|\|_\|\|______\|\|\|\|\|\|_
		_____GGGUUCUU_GG______GUGGAC_
(miRNA)	3'	____A___________A___________A	5'

UTR3

6mer

429-456

0.00605238926125796

Position on chromosome:

12:6623649-6623676

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	_______UG__GCAGCACUUUGAA______G	3'
		_CC_AGA__CU_____________CACCUG_
		_\|\|_\|\|\|__\|\|_____________\|\|\|\|\|\|_
		_GG_UCU__GA_____________GUGGAC_
(miRNA)	3'	G__U___UG_____________________A	5'

UTR3

7mer

441-464

0.00621605663022728

Position on chromosome:

12:6623661-6623684

Conserved species:

panTro2,rheMac2,oryCun2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	CUGCA__A___UU__AC____GG_______	3'
		_____GC__CU__GA__ACCU__CACCUGU
		_____\|\|__\|.__\|\|__\|\|\|\|__\|\|\|\|\|\|\|
		_____CG__GG__CU__UGGA__GUGGACA
(miRNA)	3'	____C__AG__UU_________________	5'

UTR3

7mer

657-672

0.0126807235027472

Position on chromosome:

12:6624062-6624077

Conserved species:

panTro2,rheMac2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CAGCAUGUGCAU___G_U_____________G	3'
		____________UUU_C_AGA___UCACCUG_
		____________.\|._\|_\|\|\|___\|\|\|\|\|\|\|_
		____________GAG_G_UCU___AGUGGAC_
(miRNA)	3'	___________C___G_U___UGG_______A	5'

UTR3

6mer

3032-3051

0.00370837212210191

Position on chromosome:

12:6637883-6637902

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	AACAGCGG____GG___U___________A	3'
		________GGCU__UGA_GACC_CACCUG_
		________\|\|\|\|__..\|_.\|\|\|_\|\|\|\|\|\|_
		________CCGA__GUU_UUGG_GUGGAC_
(miRNA)	3'	____________GG___C____A______A	5'

ENSG00000138738 (PRDM5)

hsa-miR-125a-3p

0.879051736626525

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3128-3147

0.0431236896356528

Position on chromosome:

4:121616198-121616217

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	AAUAUGAA________UUUUUA_______A	3'
		________UCCC_AGA______UCACCUG_
		________\|\|\|\|_\|\|\|______\|\|\|\|\|\|\|_
		________AGGG_UCU______AGUGGAC_
(miRNA)	3'	_______G____U___UGG__________A	5'

ENSG00000171612 (SLC25A33)

hsa-miR-125a-3p

0.878533624169366

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

114-129

0.0351609718830682

Position on chromosome:

1:9642674-9642689

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	CCAUAAAAUAUCU_____AUA______________	3'
		_____________GGUUC_________UCACCUGU
		_____________\|\|.\|\|_________\|\|\|\|\|\|\|\|
		_____________CCGAG_________AGUGGACA
(miRNA)	3'	__________________GGUUCUUGG________	5'

UTR3

6mer

2040-2059

0.00172286960280552

Position on chromosome:

1:9644600-9644619

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGACUACA___A_G__CC____A______G	3'
		________GGC_U_CG___ACC_CACCUG_
		________\|\|\|_._\|.___\|\|\|_\|\|\|\|\|\|_
		________CCG_G_GU___UGG_GUGGAC_
(miRNA)	3'	___________A_G__UCU___A______A	5'

UTR3

6mer

2564-2588

0.00616034829015211

Position on chromosome:

1:9645124-9645148

Conserved species:

panTro2,loxAfr3

Binding area:

(Transcript)	5'	CAUC______UAU___AUAUUAAA______	3'
		____CUCCUA____CC________ACCUGU
		____\|\|\|\|.\|____\|\|________\|\|\|\|\|\|
		____GAGGGU____GG________UGGACA
(miRNA)	3'	___C______UCUU__AG____________	5'

ENSG00000140525 (FANCI)

hsa-miR-125a-3p

0.876614529130625

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

355-370

0.0427522426815014

Position on chromosome:

15:89860046-89860061

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,fr2

Binding area:

(Transcript)	5'	AUCUGGUAAAUA_____C___________A	3'
		____________UCCAG__GCUUCACCUG_
		____________.\|\|\|.__.\|.\|\|\|\|\|\|\|_
		____________GGGUU__UGGAGUGGAC_
(miRNA)	3'	___________A_____CU__________A	5'

ENSG00000268798 (AC027307.3)

hsa-miR-125a-3p

0.876307391781439

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

437-462

0.0427058816538187

Position on chromosome:

19:1441713-1441738

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UG__AGG______UGGGUGGA_______A	3'
		__GG___CCGAGA________UCACCUG_
		__\|\|___\|\|.\|\|\|________\|\|\|\|\|\|\|_
		__CC___GGUUCU________AGUGGAC_
(miRNA)	3'	____GAG______UGG____________A	5'

ENSG00000014824 (SLC30A9)

hsa-miR-125a-3p

0.87550953333159

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

277-293

0.0373448048942998

Position on chromosome:

4:42088421-42088437

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUGUUCAUAAUG_____U_____________	3'
		____________UCCCA___AUUUCACCUGU
		____________\|\|\|\|\|___\|..\|\|\|\|\|\|\|\|
		____________AGGGU___UGGAGUGGACA
(miRNA)	3'	___________G_____UCU___________	5'

UTR3

9mer

2270-2291

0.00202047632905333

Position on chromosome:

4:42090414-42090435

Conserved species:

panTro2

Binding area:

(Transcript)	5'	GUUAGCC__G_G_G_U__UG_________	3'
		_______GG_U_U_G_GG__CUCACCUGU
		_______\|\|_\|_._._\|.__\|\|\|\|\|\|\|\|\|
		_______CC_A_G_U_CU__GAGUGGACA
(miRNA)	3'	_________G_G_G_U__UG_________	5'

UTR3

6mer

3646-3673

0.00322062749130684

Position on chromosome:

4:42091790-42091817

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	A____________AUACA__AAAGA______	3'
		_GUUCCU__GAAC_____CU_____ACCUGU
		_\|.\|\|\|.__\|\|\|\|_____\|\|_____\|\|\|\|\|\|
		_CGAGGG__CUUG_____GA_____UGGACA
(miRNA)	3'	C______UU___________G__________	5'

ENSG00000168484 (SFTPC)

hsa-miR-125a-3p

0.875484517740334

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

49-68

0.0425821578327236

Position on chromosome:

8:22021127-22021146

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	UGUCCGAAU___GG___UU___G________	3'
		_________GGU__CUA____U_UCACCUGU
		_________\|\|.__\|.\|____._\|\|\|\|\|\|\|\|
		_________CCG__GGU____G_AGUGGACA
(miRNA)	3'	____________AG___UCUU_G________	5'

ENSG00000137486 (ARRB1)

hsa-miR-125a-3p

0.865940000351587

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1419-1434

0.00160891137512591

Position on chromosome:

11:74976645-74976660

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CUUCUGCCUUCA___UCCU___C______A	3'
		____________CCC_____CC_CACCUG_
		____________\|\|\|_____\|\|_\|\|\|\|\|\|_
		____________GGG_____GG_GUGGAC_
(miRNA)	3'	___________A___UUCUU__A______A	5'

UTR3

8mer

38-60

0.0395869650495163

Position on chromosome:

11:74975264-74975286

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GACUUA_____UGUGGU___A_________	3'
		______UUUCC______GAA__UCACCUGU
		______.\|.\|\|______\|\|\|__\|\|\|\|\|\|\|\|
		______GAGGG______CUU__AGUGGACA
(miRNA)	3'	_____C_____UU_______GG________	5'

ENSG00000116005 (PCYOX1)

hsa-miR-125a-3p

0.858287818146868

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

257-269

0.0130908436662257

Position on chromosome:

2:70504782-70504794

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AAACUUGUCUGAUAA_______________G	3'
		_______________UAAGAA__UCACCUG_
		_______________.\|\|\|\|\|__\|\|\|\|\|\|\|_
		_______________GUUCUU__AGUGGAC_
(miRNA)	3'	______________G______GG_______A	5'

UTR3

7mer

346-373

0.0141952931448008

Position on chromosome:

2:70504871-70504898

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	____AA___UA___AAAAAUAA_______G	3'
		_CUC__AAG__AAU________UCACCUG_
		_\|\|\|__\|\|\|__\|\|.________\|\|\|\|\|\|\|_
		_GAG__UUC__UUG________AGUGGAC_
(miRNA)	3'	C___GG________G______________A	5'

UTR3

8mer

1291-1313

0.0128574052906142

Position on chromosome:

2:70505816-70505838

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	AACCUU____G_A__UU______________	3'
		______GGCU_C_CA__GGAA__UCACCUGU
		______\|\|\|\|_\|_\|\|__.\|\|\|__\|\|\|\|\|\|\|\|
		______CCGA_G_GU__UCUU__AGUGGACA
(miRNA)	3'	__________G__________GG________	5'

ENSG00000168887 (C2orf68)

hsa-miR-125a-3p

0.855701373869581

Gene details
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miRNA details
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UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2141-2161

0.00256257283042651

Position on chromosome:

2:85835918-85835938

Conserved species:

panTro2,oryCun2

Binding area:

(Transcript)	5'	UCCAUAG___G__G________A______G	3'
		_______GGU_UU_C_AGGACU_CACCUG_
		_______\|\|._\|._\|_\|\|.\|\|._\|\|\|\|\|\|_
		_______CCG_AG_G_UCUUGG_GUGGAC_
(miRNA)	3'	_____________G_U______A______A	5'

UTR3

6mer

1006-1032

0.00230750616996916

Position on chromosome:

2:85834783-85834809

Conserved species:

panTro2,rheMac2,rn4

Binding area:

(Transcript)	5'	U____A__UCC___UG__AAGA______A	3'
		_CUCC_CA___GGG__UU____CACCUG_
		_\|\|\|\|_\|\|___.\|.__.\|____\|\|\|\|\|\|_
		_GAGG_GU___UCU__GA____GUGGAC_
(miRNA)	3'	C_____________UG____________A	5'

UTR3

8mer

489-513

0.0245260000705551

Position on chromosome:

2:85834266-85834290

Conserved species:

panTro2,rheMac2,oryCun2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUCU_______CAC____GGA________	3'
		____GUUUUCG___AGCU___UCACCUGU
		____\|.\|..\|.___\|.\|.___\|\|\|\|\|\|\|\|
		____CGAGGGU___UUGG___AGUGGACA
(miRNA)	3'	___C_______UC________________	5'

UTR3

6mer

429-451

0.00492337073339967

Position on chromosome:

2:85834206-85834228

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GAAGA__AG_UU___GG___GG______A	3'
		_____GG__U__GGG__CUU__CACCUG_
		_____\|\|__.__..\|__\|.\|__\|\|\|\|\|\|_
		_____CC__G__UUC__GGA__GUGGAC_
(miRNA)	3'	_______GA_GG___UU___________A	5'

UTR3

6mer

89-111

0.00547915527489903

Position on chromosome:

2:85833866-85833888

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AGGCAA___AG_AUUU___AAG_______	3'
		______GGC__C____AAU___UACCUGU
		______\|\|\|__\|____\|\|.___.\|\|\|\|\|\|
		______CCG__G____UUG___GUGGACA
(miRNA)	3'	_________AG_GUUC___GA________	5'