DIANA TOOLS - MicroT-CDS

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Results: 1121 targets for miRNAs hsa-miR-1-3p

. Threshold is set to 0.7.

Name:	hsa-miR-1-3p
Alternative description:	MIMAT0000416
Related names:
miRNA sequence:	uggaauguaaagaaguauguau
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Adenocarcinoma Adenoma Aortic Valve Stenosis Arrhythmias, Cardiac Asthma Azoospermia Bone Neoplasms Breast Neoplasms Carcinoma, Ductal, Breast Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Renal Cell Carcinoma, Squamous Cell Cardiomegaly Cardiomyopathy, Dilated Cardiomyopathy, Hypertrophic Colonic Neoplasms Colonic Polyps Colorectal Neoplasms Coronary Artery Disease Death, Sudden, Cardiac Diabetes Mellitus, Type 2 Disease Disease Models, Animal Disease Progression Disorders of Sex Development Echinococcosis Endometriosis Genetic Predisposition to Disease Genomic Instability Glioblastoma Glioma Head and Neck Neoplasms Heart Failure Helicobacter Infections Hematologic Neoplasms HIV Infections Huntington Disease Hyperglycemia Hyperinsulinism Hypertrophy Hypothyroidism Inflammation Influenza in Birds Kidney Neoplasms Liver Neoplasms Lung Neoplasms Marek Disease Myocardial Infarction Myocardial Reperfusion Injury Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasms Neoplasms, Experimental Neoplasms, Hormone-Dependent Nerve Degeneration Neuralgia Neuroblastoma Ovarian Neoplasms Polycythemia Vera Poultry Diseases Prenatal Exposure Delayed Effects Recurrence Retinitis Pigmentosa Rhabdomyosarcoma Stomach Neoplasms Thrombocythemia, Essential Urinary Bladder Neoplasms Waldenstrom Macroglobulinemia

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000102531 (FNDC3A)

hsa-miR-1-3p

0.999996058982133

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1232-1252

0.00140364988367267

Position on chromosome:

13:49781233-49781253

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2

Binding area:

(Transcript)	5'	GGGUCCCG__U______CUUCCG________	3'
		________AC___CUUC______GUAUUCCA
		________\|\|___\|\|\|\|______..\|\|\|\|\|\|
		________UG___GAAG______UGUAAGGU
(miRNA)	3'	_______A__UAU____AAA___________	5'

UTR3

9mer

3538-3554

0.21268734514002

Position on chromosome:

13:49783539-49783555

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	UGAUUUUACCUC_______G____________	3'
		____________AUAUACU____UACAUUCCA
		____________\|.\|\|\|\|\|____\|\|\|\|\|\|\|\|\|
		____________UGUAUGA____AUGUAAGGU
(miRNA)	3'	___________A_______AGAA_________	5'

ENSG00000130589 (HELZ2)

hsa-miR-1-3p

0.999989606706468

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

70-82

0.198241806436803

Position on chromosome:

20:62189509-62189521

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GAGGGGCUUGCCCCAC_______________	3'
		________________CUUC__UACAUUCCA
		________________\|\|\|\|__\|\|\|\|\|\|\|\|\|
		________________GAAG__AUGUAAGGU
(miRNA)	3'	_______________U____AA_________	5'

ENSG00000070214 (SLC44A1)

hsa-miR-1-3p

0.999966070109753

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

21-36

0.12624855124319

Position on chromosome:

9:108151359-108151374

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GACGGUUAUGGAA__CC___G____________	3'
		_____________AC__AUU_____ACAUUCCA
		_____________\|\|__\|.\|_____\|\|\|\|\|\|\|\|
		_____________UG__UGA_____UGUAAGGU
(miRNA)	3'	____________A__UA___AGAAA________	5'

UTR3

7mer

1404-1416

0.0119340753237289

Position on chromosome:

9:108152742-108152754

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAAAAAAGCCUCAGCA_____U_______	3'
		________________UUUUA_CAUUCCA
		________________.\|\|\|\|_\|\|\|\|\|\|\|
		________________GAAAU_GUAAGGU
(miRNA)	3'	_______________A_____________	5'

UTR3

8mer

2034-2060

0.0159972852321463

Position on chromosome:

9:108153372-108153398

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AG___G____CAAAACAGAAG________	3'
		__AUG_GUAU___________ACAUUCCA
		__\|\|._.\|\|.___________\|\|\|\|\|\|\|\|
		__UAU_UAUG___________UGUAAGGU
(miRNA)	3'	_____G____AAGAAA_____________	5'

UTR3

9mer

3975-3996

0.0189127208084635

Position on chromosome:

9:108155313-108155334

Conserved species:

rheMac2,dasNov2

Binding area:

(Transcript)	5'	UAAUUUC_____U_____CA_________	3'
		_______UGUAU_CUUUU__UACAUUCCA
		_______\|..\|\|_\|\|\|.\|__\|\|\|\|\|\|\|\|\|
		_______AUGUA_GAAGA__AUGUAAGGU
(miRNA)	3'	______U_____U_____A__________	5'

UTR3

6mer

8064-8079

0.0058116801586612

Position on chromosome:

9:108159402-108159417

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,dasNov2,echTel1,monDom5

Binding area:

(Transcript)	5'	CCAAGAGCUCUGA___GGAUGGA______	3'
		_____________AUU_______AUUCCA
		_____________\|.\|_______\|\|\|\|\|\|
		_____________UGA_______UAAGGU
(miRNA)	3'	____________A___AGAAAUG______	5'

ENSG00000152661 (GJA1)

hsa-miR-1-3p

0.999964110128461

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

470-484

0.0811518590690825

Position on chromosome:

6:121769613-121769627

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUCCUUAAGUCCC____AAA__________	3'
		______________UGCU_____ACAUUCCA
		______________\|.\|\|_____\|\|\|\|\|\|\|\|
		______________AUGA_____UGUAAGGU
(miRNA)	3'	_____________U____AGAAA________	5'

UTR3

6mer

673-692

0.00582051593965194

Position on chromosome:

6:121769816-121769835

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUCAUUAC___C_______CAU______U	3'
		________CAU_ACUUUUU___CAUUCC_
		________\|\|\|_\|\|\|\|.\|\|___\|\|\|\|\|\|_
		________GUA_UGAAGAA___GUAAGG_
(miRNA)	3'	_______U___________AU_______U	5'

UTR3

8mer

1594-1615

0.091014049405417

Position on chromosome:

6:121770737-121770758

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGAAAAU___UA____G___G________	3'
		_______UAC__AUUU_UUU_ACAUUCCA
		_______\|\|\|__\|.\|\|_\|\|\|_\|\|\|\|\|\|\|\|
		_______AUG__UGAA_AAA_UGUAAGGU
(miRNA)	3'	______U___UA____G____________	5'

ENSG00000127124 (HIVEP3)

hsa-miR-1-3p

0.999941805926324

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

1188-1207

0.0019622007476524

Position on chromosome:

1:41973224-41973243

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	CUGUUGAA_____CGGGGUGGC_______U	3'
		________AUGCG__________CAUUCC_
		________\|\|.\|.__________\|\|\|\|\|\|_
		________UAUGU__________GUAAGG_
(miRNA)	3'	_____________AUGAAGAAAU______U	5'

UTR3

6mer

813-828

0.0027930575201004

Position on chromosome:

1:41972849-41972864

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CAGAUUCCUCUA__CC__GCUC______C	3'
		____________GC__CU____CAUUCC_
		____________.\|__\|\|____\|\|\|\|\|\|_
		____________UG__GA____GUAAGG_
(miRNA)	3'	___________A__AA__AAU_______U	5'

UTR3

9mer

388-414

0.165331306474624

Position on chromosome:

1:41972424-41972450

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UC__________AAAUGGCAA_________	3'
		__UAUG_UUCUU_________UACAUUCCA
		__.\|\|._\|\|\|\|\|_________\|\|\|\|\|\|\|\|\|
		__GUAU_AAGAA_________AUGUAAGGU
(miRNA)	3'	_U____G_______________________	5'

ENSG00000107854 (TNKS2)

hsa-miR-1-3p

0.999932351357977

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

201-225

0.0352506029295765

Position on chromosome:

10:93622958-93622982

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUUU__GC_____AACAGA_GC_______	3'
		____CA__ACUUU______U__CAUUCCA
		____\|\|__\|\|\|\|.______\|__\|\|\|\|\|\|\|
		____GU__UGAAG______A__GUAAGGU
(miRNA)	3'	___U__A______A______AU_______	5'

UTR3

6mer

534-560

0.00685585044291693

Position on chromosome:

10:93623291-93623317

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,echTel1,monDom5

Binding area:

(Transcript)	5'	UG__UG_GUGA_______AUUUG______	3'
		__AU__A____UCUUUAC_____AUUCCA
		__\|\|__\|____\|\|\|\|\|\|\|_____\|\|\|\|\|\|
		__UA__U____AGAAAUG_____UAAGGU
(miRNA)	3'	____UG_AUGA__________________	5'

UTR3

8mer

701-719

0.0311699166207674

Position on chromosome:

10:93623458-93623476

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUACCUUUGU_______AGAC___________	3'
		__________AUGUAUG_______ACAUUCCA
		__________\|\|..\|\|._______\|\|\|\|\|\|\|\|
		__________UAUGUAU_______UGUAAGGU
(miRNA)	3'	_________________GAAGAAA________	5'

UTR3

6mer

1302-1317

0.00476521222400678

Position on chromosome:

10:93624059-93624074

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GAAAUGCUGUCC____AAA___GC______U	3'
		____________CAUA_____U__CAUUCC_
		____________\|\|\|\|_____\|__\|\|\|\|\|\|_
		____________GUAU_____A__GUAAGG_
(miRNA)	3'	___________U____GAAGA_AU______U	5'

UTR3

7mer

1450-1472

0.00390918411409069

Position on chromosome:

10:93624207-93624229

Conserved species:

panTro2

Binding area:

(Transcript)	5'	AUCUU___UC____AAUGAGG_______C	3'
		_____UAC__ACUU_______ACAUUCC_
		_____\|\|\|__\|\|\|\|_______\|\|\|\|\|\|\|_
		_____AUG__UGAA_______UGUAAGG_
(miRNA)	3'	____U___UA____GAAA__________U	5'

UTR3

8mer

2221-2238

0.0856751642308701

Position on chromosome:

10:93624978-93624995

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	GUGUCUUACUU_____GUAUC________	3'
		___________GUACU_____ACAUUCCA
		___________.\|\|\|\|_____\|\|\|\|\|\|\|\|
		___________UAUGA_____UGUAAGGU
(miRNA)	3'	__________G_____AGAAA________	5'

ENSG00000111962 (UST)

hsa-miR-1-3p

0.999922965323262

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

94-119

0.0207872625235952

Position on chromosome:

6:149395347-149395372

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GG______UAAAAAGAACAAA_______C	3'
		__GUGCAU_____________ACAUUCC_
		__.\|.\|\|\|_____________\|\|\|\|\|\|\|_
		__UAUGUA_____________UGUAAGG_
(miRNA)	3'	________UGAAGAAA____________U	5'

UTR3

8mer

812-840

0.0180131586103456

Position on chromosome:

6:149396065-149396093

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	______GGCCA___CCA__GAG________	3'
		_UGCAU_____GCU___UU___ACAUUCCA
		_\|.\|\|\|_____.\|\|___\|\|___\|\|\|\|\|\|\|\|
		_AUGUA_____UGA___AA___UGUAAGGU
(miRNA)	3'	U_____________AG___A__________	5'

UTR3

6mer

2153-2169

0.00335457364476129

Position on chromosome:

6:149397406-149397422

Conserved species:

panTro2,rheMac2,mm9,loxAfr3

Binding area:

(Transcript)	5'	ACCCUGUGAGUC______AUGAA______	3'
		____________AUUUCU_____AUUCCA
		____________\|.\|\|\|\|_____\|\|\|\|\|\|
		____________UGAAGA_____UAAGGU
(miRNA)	3'	___________A______AAUG_______	5'

UTR3

8mer

2606-2627

0.123347239318322

Position on chromosome:

6:149397859-149397880

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UAUUUAU____AC_____CAGC________	3'
		_______UAUA___CUUU____ACAUUCCA
		_______.\|\|\|___\|\|\|\|____\|\|\|\|\|\|\|\|
		_______GUAU___GAAA____UGUAAGGU
(miRNA)	3'	______U____GAA________________	5'

ENSG00000117600 (LPPR4)

hsa-miR-1-3p

0.999842858252238

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

943-956

0.0110627321111753

Position on chromosome:

1:99773510-99773523

Conserved species:

panTro2,rheMac2,rn4,oryCun2,canFam2,dasNov2

Binding area:

(Transcript)	5'	UAAAAGCAAAAAUA_______G___________U	3'
		______________ACA_AUU_____ACAUUCC_
		______________\|\|\|_\|.\|_____\|\|\|\|\|\|\|_
		______________UGU_UGA_____UGUAAGG_
(miRNA)	3'	_____________A___A___AGAAA_______U	5'

UTR3

9mer

2200-2224

0.142786711898008

Position on chromosome:

1:99774767-99774791

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAU____AAAAA____G___________	3'
		____UACA_____AUUU_UUUACAUUCCA
		____\|\|\|\|_____\|.\|\|_\|\|\|\|\|\|\|\|\|\|\|
		____AUGU_____UGAA_AAAUGUAAGGU
(miRNA)	3'	___U____A________G___________	5'

ENSG00000104332 (SFRP1)

hsa-miR-1-3p

0.999805004359491

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

3058-3077

0.00281627585592112

Position on chromosome:

8:41122539-41122558

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UCCAGUCG____UG_____GCA_______C	3'
		________GC_U__UUCUU___GCAUUCC_
		________.\|_\|__\|\|\|\|\|___.\|\|\|\|\|\|_
		________UG_A__AAGAA___UGUAAGG_
(miRNA)	3'	_______A__U_UG_____A_________U	5'

UTR3

6mer

565-585

0.00474825002571669

Position on chromosome:

8:41120046-41120066

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	AGAAGAUA_____GGAGGUGA_G______	3'
		________GCAUG________G_AUUCCA
		________.\|\|\|.________._\|\|\|\|\|\|
		________UGUAU________U_UAAGGU
(miRNA)	3'	_______A_____GAAGAAA__G______	5'

UTR3

9mer

152-177

0.142756801753132

Position on chromosome:

8:41119633-41119658

Conserved species:

panTro2,rheMac2,rn4,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGA____U___AAAAUG____________	3'
		___AUAC_GUG______UUUUACAUUCCA
		___\|\|\|\|_.\|.______.\|\|\|\|\|\|\|\|\|\|\|
		___UAUG_UAU______GAAAUGUAAGGU
(miRNA)	3'	___________GAA_______________	5'

ENSG00000205542 (TMSB4X)

hsa-miR-1-3p

0.999804377980067

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

17-35

0.15026890029406

Position on chromosome:

X:12994948-12994966

Conserved species:

panTro2,rheMac2,mm9,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	UGCGCCGCCA______A___G_________	3'
		__________AUAUGC__CU_UACAUUCCA
		__________\|.\|\|.\|__\|\|_\|\|\|\|\|\|\|\|\|
		__________UGUAUG__GA_AUGUAAGGU
(miRNA)	3'	_________A______AA__A_________	5'

ENSG00000153187 (HNRNPU)

hsa-miR-1-3p

0.999784899999894

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3191-3207

0.148717235251907

Position on chromosome:

1:245017659-245017675

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	UUUAGUAGGCUA_______AA________	3'
		____________ACUUUUU__ACAUUCCA
		____________\|\|\|\|.\|\|__\|\|\|\|\|\|\|\|
		____________UGAAGAA__UGUAAGGU
(miRNA)	3'	___________A_______A_________	5'

ENSG00000119596 (YLPM1)

hsa-miR-1-3p

0.999566543545002

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

226-254

0.0933095799877424

Position on chromosome:

14:75288130-75288158

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	________GAAAGGGCA______________	3'
		_UACAUAU_________UUCU_UACAUUCCA
		_\|\|\|\|\|\|._________\|\|\|\|_\|\|\|\|\|\|\|\|\|
		_AUGUAUG_________AAGA_AUGUAAGGU
(miRNA)	3'	U____________________A_________	5'

UTR3

9mer

850-874

0.0439520707347949

Position on chromosome:

14:75288754-75288778

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUAA_G___G_GUCAAC__C_________	3'
		____A_AUG_U______CU_UACAUUCCA
		____\|_\|\|._\|______\|\|_\|\|\|\|\|\|\|\|\|
		____U_UAU_A______GA_AUGUAAGGU
(miRNA)	3'	___A_G___G_A_______A_________	5'

ENSG00000120458 (MSANTD2)

hsa-miR-1-3p

0.99956319408412

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

360-379

0.137135786330312

Position on chromosome:

11:124636754-124636773

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CUAAUAUAA___A__GUAGG_________	3'
		_________ACA_AU_____UACAUUCCA
		_________\|\|\|_\|._____\|\|\|\|\|\|\|\|\|
		_________UGU_UG_____AUGUAAGGU
(miRNA)	3'	________A___A__AAGAA_________	5'

ENSG00000059728 (MXD1)

hsa-miR-1-3p

0.999549698358023

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

222-233

0.127273176573681

Position on chromosome:

2:70165639-70165650

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AAUUUGUCUCUGAGAGA__A_________	3'
		_________________CU_UACAUUCCA
		_________________\|\|_\|\|\|\|\|\|\|\|\|
		_________________GA_AUGUAAGGU
(miRNA)	3'	________________A__A_________	5'

UTR3

6mer

551-563

0.00245663118539857

Position on chromosome:

2:70165968-70165980

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CGCCCUUCACACCGC___________________C	3'
		_______________GCAUGCU______CAUUCC_
		_______________.\|\|\|.\|\|______\|\|\|\|\|\|_
		_______________UGUAUGA______GUAAGG_
(miRNA)	3'	______________A_______AGAAAU______U	5'

UTR3

6mer

1328-1346

0.00443675320192688

Position on chromosome:

2:70166745-70166763

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GUAGGUAUC____AAA__AGUU_______C	3'
		_________UACA___UU_____CAUUCC_
		_________\|\|\|\|___\|\|_____\|\|\|\|\|\|_
		_________AUGU___AA_____GUAAGG_
(miRNA)	3'	________U____AUG__GAAAU______U	5'

UTR3

6mer

1768-1773

0.0024716794558713

Position on chromosome:

2:70167185-70167190

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UGGAAGUAGUGGAUUCCUAAAUG______	3'
		_______________________AUUCCA
		_______________________\|\|\|\|\|\|
		_______________________UAAGGU
(miRNA)	3'	______________________G______	5'

ENSG00000125430 (HS3ST3B1)

hsa-miR-1-3p

0.999030853337859

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

158-177

0.11280946430357

Position on chromosome:

17:14249122-14249141

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AGUUAGCUU____A____GUUA________	3'
		_________CAUA__UCU____ACAUUCCA
		_________\|\|\|\|__\|\|\|____\|\|\|\|\|\|\|\|
		_________GUAU__AGA____UGUAAGGU
(miRNA)	3'	________U____GA___AA__________	5'

UTR3

7mer

362-373

0.00551898252789897

Position on chromosome:

17:14249326-14249337

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCUUGUCUUGUCUUGGG___CC________	3'
		_________________UCU___CAUUCCA
		_________________\|\|\|___\|\|\|\|\|\|\|
		_________________AGA___GUAAGGU
(miRNA)	3'	________________A___AAU_______	5'

UTR3

6mer

977-993

0.00208663528108102

Position on chromosome:

17:14249941-14249957

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	GGCCCUGUGUC__CC___GCCC______C	3'
		___________CU__UCU____CAUUCC_
		___________\|\|__\|\|\|____\|\|\|\|\|\|_
		___________GA__AGA____GUAAGG_
(miRNA)	3'	__________U_______AAU_______U	5'

UTR3

6mer

3389-3396

0.00368706278276706

Position on chromosome:

17:14252353-14252360

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UUUGUAAAAAAGGAAAAUGGA_G______	3'
		_____________________A_AUUCCA
		_____________________\|_\|\|\|\|\|\|
		_____________________U_UAAGGU
(miRNA)	3'	____________________A_G______	5'

ENSG00000205268 (PDE7A)

hsa-miR-1-3p

0.998995928031777

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

440-454

0.12352294825241

Position on chromosome:

8:66630185-66630199

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	AGGACUAAUUUUAA_____AA_________	3'
		______________ACUUC___ACAUUCCA
		______________\|\|\|\|\|___\|\|\|\|\|\|\|\|
		______________UGAAG___UGUAAGGU
(miRNA)	3'	_____________A_____AAA________	5'

ENSG00000155096 (AZIN1)

hsa-miR-1-3p

0.998946591115128

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2148-2168

0.124358381548044

Position on chromosome:

8:103840733-103840753

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,fr2,danRer6

Binding area:

(Transcript)	5'	CAGGUUAA___UG___GGUCA________	3'
		________GCU__UCU_____ACAUUCCA
		________.\|\|__\|\|\|_____\|\|\|\|\|\|\|\|
		________UGA__AGA_____UGUAAGGU
(miRNA)	3'	_______A________AA___________	5'

UTR3

6mer

493-521

0.00434907511924268

Position on chromosome:

8:103839078-103839106

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4

Binding area:

(Transcript)	5'	_______AUGGGG______GCAAA______	3'
		_UAUAUU______UUUUAU_____AUUCCA
		_.\|\|\|.\|______.\|\|\|\|._____\|\|\|\|\|\|
		_GUAUGA______GAAAUG_____UAAGGU
(miRNA)	3'	U______A______________________	5'

UTR3

7mer

339-355

0.0171975488379925

Position on chromosome:

8:103842061-103842077

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AACUGUCUGAGG____AAAUAC_______	3'
		____________ACUU______CAUUCCA
		____________\|\|\|\|______\|\|\|\|\|\|\|
		____________UGAA______GUAAGGU
(miRNA)	3'	___________A____GAAAU________	5'

ENSG00000198087 (CD2AP)

hsa-miR-1-3p

0.99888985971517

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2766-2790

0.131754204809272

Position on chromosome:

6:47594730-47594754

Conserved species:

rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,xenTro2

Binding area:

(Transcript)	5'	UGCA__UG_____GUAACCUA________	3'
		____GU__AUGUU________ACAUUCCA
		____.\|__\|\|..\|________\|\|\|\|\|\|\|\|
		____UA__UAUGA________UGUAAGGU
(miRNA)	3'	______UG_____AGAAA___________	5'

UTR3

9mer

335-362

0.0271694637241877

Position on chromosome:

6:47512358-47512385

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	A_____A_G_____UUUGAG_________	3'
		_GUGUA_A_UUCUU______UACAUUCCA
		_.\|..\|_\|_\|\|\|\|\|______\|\|\|\|\|\|\|\|\|
		_UAUGU_U_AAGAA______AUGUAAGGU
(miRNA)	3'	______A_G____________________	5'

ENSG00000095139 (ARCN1)

hsa-miR-1-3p

0.99882493161436

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

937-961

0.00279032590262854

Position on chromosome:

11:118472367-118472391

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUG______UCCCGUAUCAAUU______U	3'
		___UUCUUU_____________CAUUCC_
		___\|\|\|\|\|\|_____________\|\|\|\|\|\|_
		___AAGAAA_____________GUAAGG_
(miRNA)	3'	__G______U__________________U	5'

UTR3

7mer

1223-1247

0.00785853023247662

Position on chromosome:

11:118472653-118472677

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	GCC___G______GUAAUCCAUUC_______U	3'
		___ACA____UCU___________ACAUUCC_
		___\|\|\|____\|\|\|___________\|\|\|\|\|\|\|_
		___UGU____AGA___________UGUAAGG_
(miRNA)	3'	__A___AUGA___AA________________U	5'

UTR3

8mer

2137-2160

0.110301001496267

Position on chromosome:

11:118473567-118473590

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAA_______GGGAAUAUA________	3'
		_____AUACAUA_________ACAUUCCA
		_____\|\|\|\|\|\|\|_________\|\|\|\|\|\|\|\|
		_____UAUGUAU_________UGUAAGGU
(miRNA)	3'	____________GAAGAAA__________	5'

ENSG00000081019 (RSBN1)

hsa-miR-1-3p

0.9987925962305

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

4017-4024

0.120505654619984

Position on chromosome:

1:114308471-114308478

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AUAAUUCUAUAAAGAGAAAUG________	3'
		_____________________ACAUUCCA
		_____________________\|\|\|\|\|\|\|\|
		_____________________UGUAAGGU
(miRNA)	3'	____________________A________	5'

ENSG00000099250 (NRP1)

hsa-miR-1-3p

0.998788078319416

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

40-59

0.120444538387222

Position on chromosome:

10:33466460-33466479

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AAAUUCCAA______GA__AC_________	3'
		_________AC_UAU__CU__UACAUUCCA
		_________\|\|_\|\|.__\|\|__\|\|\|\|\|\|\|\|\|
		_________UG_AUG__GA__AUGUAAGGU
(miRNA)	3'	________A__U___AA__A__________	5'

ENSG00000113739 (STC2)

hsa-miR-1-3p

0.998770371851116

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

3069-3093

0.112803648507336

Position on chromosome:

5:172744785-172744809

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CGUC___UUU__UA___AUGG________	3'
		____CAU___CU__UCU____ACAUUCCA
		____\|\|\|___\|\|__\|\|\|____\|\|\|\|\|\|\|\|
		____GUA___GA__AGA____UGUAAGGU
(miRNA)	3'	___U___U_________AA__________	5'

UTR3

6mer

2687-2704

0.00267570916275493

Position on chromosome:

5:172744403-172744420

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	UCCGCGGAAGU__GG__GG_____G______	3'
		___________CA__GC__CU__G_AUUCCA
		___________\|\|__.\|__\|\|__._\|\|\|\|\|\|
		___________GU__UG__GA__U_UAAGGU
(miRNA)	3'	__________U__A___AA__AA_G______	5'

UTR3

6mer

2066-2083

0.00139149427928439

Position on chromosome:

5:172743782-172743799

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUUGGUAAAGC_____C__G______G______	3'
		___________UGCGU_CU_____GC_AUUCCA
		___________\|.\|.\|_\|\|_____.\|_\|\|\|\|\|\|
		___________AUGUA_GA_____UG_UAAGGU
(miRNA)	3'	__________U_____U__AGAAA_________	5'

UTR3

7mer

566-572

0.0033363352130974

Position on chromosome:

5:172742282-172742288

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCUUAAAACUGAGGAAGGUCC_______U	3'
		_____________________ACAUUCC_
		_____________________\|\|\|\|\|\|\|_
		_____________________UGUAAGG_
(miRNA)	3'	____________________A_______U	5'

ENSG00000108960 (MMD)

hsa-miR-1-3p

0.99854428247374

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1510-1516

0.0265199104257722

Position on chromosome:

17:53471484-53471490

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AUAAGGUAGUGAAUUAAUUAUU_______	3'
		______________________CAUUCCA
		______________________\|\|\|\|\|\|\|
		______________________GUAAGGU
(miRNA)	3'	_____________________U_______	5'

UTR3

7mer

1505-1518

0.0272417195562515

Position on chromosome:

17:53471479-53471492

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAGUGAAUUAAUUA___A__C_______	3'
		_______________UUC_UU_CAUUCCA
		_______________\|\|\|_\|\|_\|\|\|\|\|\|\|
		_______________AAG_AA_GUAAGGU
(miRNA)	3'	______________G___A__U_______	5'

UTR3

8mer

1138-1152

0.0696239978480737

Position on chromosome:

17:53471112-53471126

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAUUUUUGCAGCAA___G_____A__________	3'
		______________GCA____UC___ACAUUCCA
		______________.\|\|____\|\|___\|\|\|\|\|\|\|\|
		______________UGU____AG___UGUAAGGU
(miRNA)	3'	_____________A___AUGA__AAA________	5'

UTR3

7mer

111-137

0.018648043108088

Position on chromosome:

17:53471806-53471832

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UG_____CAAGAGUGAUGGCAU_______	3'
		__UUCUU_______________CAUUCCA
		__\|\|\|\|\|_______________\|\|\|\|\|\|\|
		__AAGAA_______________GUAAGGU
(miRNA)	3'	_G_____AU____________________	5'

ENSG00000110987 (BCL7A)

hsa-miR-1-3p

0.998470257943277

Gene details
	loading...
miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

256-284

0.00348492562413827

Position on chromosome:

12:122497326-122497354

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	_____C___G___CGGAAGCCA_G______	3'
		_UGCA_ACU_UCU_________G_AUUCCA
		_\|.\|\|_\|\|\|_\|\|\|_________._\|\|\|\|\|\|
		_AUGU_UGA_AGA_________U_UAAGGU
(miRNA)	3'	U____A_______AA________G______	5'

UTR3

6mer

1571-1595

0.00213176447336016

Position on chromosome:

12:122498641-122498665

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAU____GGAAGUG___GC__G______	3'
		____CAUG_______UCU__UG_AUUCCA
		____\|\|\|._______\|\|\|__\|._\|\|\|\|\|\|
		____GUAU_______AGA__AU_UAAGGU
(miRNA)	3'	___U____GA________A___G______	5'

UTR3

8mer

2564-2582

0.0960099540208533

Position on chromosome:

12:122499634-122499652

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGUCGGGGAA______GG__AC________	3'
		__________GC_UGC__CU__ACAUUCCA
		__________.\|_\|.\|__\|\|__\|\|\|\|\|\|\|\|
		__________UG_AUG__GA__UGUAAGGU
(miRNA)	3'	_________A__U___AA__AA________	5'

UTR3

6mer

2800-2813

0.0150063197141423

Position on chromosome:

12:122499870-122499883

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCAGUAUAAUUUUUC____AUU_________	3'
		_______________ACUU_____UAUUCCA
		_______________\|\|\|\|_____.\|\|\|\|\|\|
		_______________UGAA_____GUAAGGU
(miRNA)	3'	______________A____GAAAU_______	5'

ENSG00000017427 (IGF1)

hsa-miR-1-3p

0.998459301381825

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

6482-6501

0.11178102787614

Position on chromosome:

12:102796127-102796146

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CCCAAUGAA_____CAAGUAA__________	3'
		_________AUACA_________ACAUUCCA
		_________\|\|\|\|\|_________\|\|\|\|\|\|\|\|
		_________UAUGU_________UGUAAGGU
(miRNA)	3'	______________AUGAAGAAA________	5'

UTR3

6mer

6053-6079

0.00473511260048887

Position on chromosome:

12:102795698-102795724

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GC___CCAA____AACCC___AGA_____	3'
		__ACA____UUCU_____ACA___UUCCA
		__\|\|\|____\|\|\|\|_____\|\|\|___\|\|\|\|\|
		__UGU____AAGA_____UGU___AAGGU
(miRNA)	3'	_A___AUG_____AA______________	5'

ENSG00000198597 (ZNF536)

hsa-miR-1-3p

0.998350254020365

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

197-212

0.0295187787299055

Position on chromosome:

19:31201975-31201990

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1,danRer6

Binding area:

(Transcript)	5'	UCUGGUAAAAGUU____AAC__________	3'
		_____________UGCU____UGCAUUCCA
		_____________\|.\|\|____\|.\|\|\|\|\|\|\|
		_____________AUGA____AUGUAAGGU
(miRNA)	3'	____________U____AGAA_________	5'

UTR3

8mer

2136-2143

0.0411662686975

Position on chromosome:

19:31203914-31203921

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GUGGGGGAAAAAAUGAGAGCC________	3'
		_____________________ACAUUCCA
		_____________________\|\|\|\|\|\|\|\|
		_____________________UGUAAGGU
(miRNA)	3'	____________________A________	5'

UTR3

6mer

2246-2271

0.00463795213952076

Position on chromosome:

19:31204024-31204049

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CCU______UGUGGUGUGUG_UG______	3'
		___CUUCUU___________U__AUUCCA
		___\|\|\|\|\|\|___________\|__\|\|\|\|\|\|
		___GAAGAA___________A__UAAGGU
(miRNA)	3'	__U__________________UG______	5'

UTR3

8mer

2462-2477

0.0400736688553326

Position on chromosome:

19:31204240-31204255

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUGCUGGUCAUA_____GUC_________U	3'
		____________AUACU____UACAUUCC_
		____________\|\|\|\|\|____\|\|\|\|\|\|\|\|_
		____________UAUGA____AUGUAAGG_
(miRNA)	3'	___________G_____AGAA________U	5'

ENSG00000163683 (SMIM14)

hsa-miR-1-3p

0.998209417715181

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

5606-5629

0.00794019659949499

Position on chromosome:

4:39553556-39553579

Conserved species:

panTro2,rheMac2,oryCun2,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUUU______CUGUG___CUGC______U	3'
		____UGCUUC_____UUA____CAUUCC_
		____\|.\|\|\|\|_____\|\|\|____\|\|\|\|\|\|_
		____AUGAAG_____AAU____GUAAGG_
(miRNA)	3'	___U______A_________________U	5'

UTR3

8mer

5520-5535

0.0818313970530249

Position on chromosome:

4:39553470-39553485

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UUGGUUGUCCUAA____ACAA________	3'
		_____________ACUU____ACAUUCCA
		_____________\|\|\|\|____\|\|\|\|\|\|\|\|
		_____________UGAA____UGUAAGGU
(miRNA)	3'	____________A____GAAA________	5'

UTR3

7mer

4627-4643

0.00253749670696821

Position on chromosome:

4:39552577-39552593

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GUGAACCAAGAU__C__CA____________	3'
		____________CG_AC__CU__GCAUUCCA
		____________\|._\|\|__\|\|__.\|\|\|\|\|\|\|
		____________GU_UG__GA__UGUAAGGU
(miRNA)	3'	___________U__A__AA__AA________	5'

UTR3

6mer

4394-4410

0.00165048163518531

Position on chromosome:

4:39552344-39552360

Conserved species:

panTro2,dasNov2

Binding area:

(Transcript)	5'	AUCUUUUUUUC___C___AUCU______U	3'
		___________ACU_CUU____CAUUCC_
		___________\|\|\|_\|\|\|____\|\|\|\|\|\|_
		___________UGA_GAA____GUAAGG_
(miRNA)	3'	__________A___A___AU________U	5'

UTR3

7mer

3390-3397

0.00463033603232392

Position on chromosome:

4:39551340-39551347

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	AGAUGGAGCUAAAUCCCUAUA________	3'
		_____________________GCAUUCCA
		_____________________.\|\|\|\|\|\|\|
		_____________________UGUAAGGU
(miRNA)	3'	____________________A________	5'

UTR3

6mer

2355-2369

0.0020658019092987

Position on chromosome:

4:39550305-39550319

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUGUUGACCUAGUA____AUAU________	3'
		______________AUUU_____UAUUCCA
		______________\|.\|\|_____.\|\|\|\|\|\|
		______________UGAA_____GUAAGGU
(miRNA)	3'	_____________A____GAAAU_______	5'

UTR3

8mer

2192-2218

0.00495261576757097

Position on chromosome:

4:39550142-39550168

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UC___GUUUUG_______AAAC________	3'
		__ACA______GCU_CUU____ACAUUCCA
		__\|\|\|______.\|\|_\|\|\|____\|\|\|\|\|\|\|\|
		__UGU______UGA_GAA____UGUAAGGU
(miRNA)	3'	_A___A________A___A___________	5'

UTR3

7mer

854-867

0.00844714804762622

Position on chromosome:

4:39548804-39548817

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	CUUUGUAAGACCUA___AAAG________U	3'
		______________ACU_____ACAUUCC_
		______________\|\|\|_____\|\|\|\|\|\|\|_
		______________UGA_____UGUAAGG_
(miRNA)	3'	_____________A___AGAAA_______U	5'

ENSG00000156875 (HIAT1)

hsa-miR-1-3p

0.998077403081254

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

54-74

0.112890669394306

Position on chromosome:

1:100547820-100547840

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1

Binding area:

(Transcript)	5'	UUCACCUC__G____GGAUG_________	3'
		________UA_UUCU_____UACAUUCCA
		________\|\|_\|\|\|\|_____\|\|\|\|\|\|\|\|\|
		________AU_AAGA_____AUGUAAGGU
(miRNA)	3'	_______U__G____A_____________	5'

ENSG00000196975 (ANXA4)

hsa-miR-1-3p

0.997884979051997

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

246-254

0.00454370491245172

Position on chromosome:

2:70052894-70052902

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUUUAAAGUAGAAAUAAAUA_________	3'
		____________________UGUAUUCCA
		____________________\|..\|\|\|\|\|\|
		____________________AUGUAAGGU
(miRNA)	3'	___________________A_________	5'

UTR3

6mer

300-317

0.00523671699847717

Position on chromosome:

2:70052948-70052965

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACAGACAUUGA_______AAAU_________	3'
		___________AUAUAUU______UAUUCCA
		___________\|.\|\|\|.\|______.\|\|\|\|\|\|
		___________UGUAUGA______GUAAGGU
(miRNA)	3'	__________A_______AGAAAU_______	5'

UTR3

8mer

677-697

0.10154808137022

Position on chromosome:

2:70053325-70053345

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUUACCAA_____AAUG__GA________	3'
		________ACAUA____CU__ACAUUCCA
		________\|\|\|\|\|____\|\|__\|\|\|\|\|\|\|\|
		________UGUAU____GA__UGUAAGGU
(miRNA)	3'	_______A_____GAA___AA________	5'

ENSG00000125266 (EFNB2)

hsa-miR-1-3p

0.997732934707239

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

2419-2440

0.00212606320486198

Position on chromosome:

13:107144498-107144519

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGACACG___GC__ACACAG__G______	3'
		_______ACA__AC______UG_AUUCCA
		_______\|\|\|__\|\|______\|._\|\|\|\|\|\|
		_______UGU__UG______AU_UAAGGU
(miRNA)	3'	______A___A___AAGAA___G______	5'

UTR3

6mer

2352-2362

0.000975275561051958

Position on chromosome:

13:107144431-107144441

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UGCAGGAAGAAAAGCCCC_____________	3'
		__________________UCUU__CAUUCCG
		__________________\|\|\|\|__\|\|\|\|\|\|.
		__________________AGAA__GUAAGGU
(miRNA)	3'	_________________A____AU_______	5'

UTR3

7mer

1616-1643

0.00762824438667583

Position on chromosome:

13:107143695-107143722

Conserved species:

panTro2,rheMac2,monDom5

Binding area:

(Transcript)	5'	C_______GGGAAAAACAACAU_______	3'
		_UACUUCU______________CAUUCCA
		_\|\|\|\|\|\|\|______________\|\|\|\|\|\|\|
		_AUGAAGA______________GUAAGGU
(miRNA)	3'	U_______AAU__________________	5'

UTR3

6mer

328-355

0.00851919779630963

Position on chromosome:

13:107142407-107142434

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3,xenTro2

Binding area:

(Transcript)	5'	_________G____ACGGCAGUGU______C	3'
		_ACA_GCUU_UUUA__________CAUUCC_
		_\|\|\|_.\|\|\|_\|\|\|\|__________\|\|\|\|\|\|_
		_UGU_UGAA_AAAU__________GUAAGG_
(miRNA)	3'	A___A____G____________________U	5'

UTR3

8mer

74-93

0.0909426110767764

Position on chromosome:

13:107142153-107142172

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,fr2,danRer6

Binding area:

(Transcript)	5'	GAAAAUGAA__C____AAG_____________	3'
		_________AU_CGUG___UC___ACAUUCCA
		_________\|\|_\|.\|.___\|\|___\|\|\|\|\|\|\|\|
		_________UA_GUAU___AG___UGUAAGGU
(miRNA)	3'	___________U____GA___AAA________	5'