DIANA TOOLS - MicroT-CDS

Filters

Advanced options:

Threshold:

Results: 1051 targets for miRNAs hsa-let-7a-5p

. Threshold is set to 0.7.

Name:	hsa-let-7a-5p
Alternative description:	MIMAT0000062
Related names:
miRNA sequence:	ugagguaguagguuguauaguu
External links:	miRBase
DIANA resources:	microT-CDS
Related diseases:	Acute Disease Adenocarcinoma Adenoma Adenoma, Bile Duct Alzheimer Disease Anemia, Sickle Cell Aortic Valve Stenosis Ascariasis Asthma Autoimmune Diseases Azoospermia Bites and Stings Bone Neoplasms Brain Neoplasms Breast Neoplasms Breast Neoplasms, Male Burkitt Lymphoma Carcinoma Carcinoma, Hepatocellular Carcinoma, Non-Small-Cell Lung Carcinoma, Papillary Carcinoma, Renal Cell Carcinoma, Small Cell Carcinoma, Squamous Cell Cardiomyopathies Cardiomyopathy, Hypertrophic Cell Transformation, Neoplastic Chromosome Aberrations Chromosome Deletion Chronic Periodontitis Colitis, Ulcerative Colonic Neoplasms Colorectal Neoplasms Cystadenocarcinoma, Serous Dermatitis, Atopic Diabetes Mellitus Diabetes Mellitus, Type 2 Disease Disease Models, Animal Disease Progression Disorders of Sex Development Down Syndrome Echinococcosis Esophageal Neoplasms Facial Neoplasms Fatty Liver Fibrosis Genetic Predisposition to Disease Glioma Head and Neck Neoplasms Hematologic Neoplasms Hepatitis C, Chronic HIV Infections Hodgkin Disease Huntington Disease Hypertension Inflammation Influenza in Birds Insulin Resistance Intellectual Disability Ischemia Kidney Failure, Chronic Kidney Neoplasms Laryngeal Neoplasms Leiomyoma Leprosy Leukemia Leukemia, Lymphocytic, Chronic, B-Cell Leukemia, Myeloid, Acute Leukemia, Promyelocytic, Acute Liver Cirrhosis Liver Neoplasms Lung Neoplasms Lupus Erythematosus, Systemic Lupus Nephritis Lymphatic Metastasis Lymphoma, Follicular Lymphoma, Large B-Cell, Diffuse Malaria, Falciparum Marek Disease Melanoma Mesothelioma Mouth Neoplasms Multiple Myeloma Multiple Sclerosis Muscular Dystrophies Myocardial Infarction Myocardial Reperfusion Injury Myotonic Dystrophy Nasopharyngeal Neoplasms Neoplasm Invasiveness Neoplasm Metastasis Neoplasm Recurrence, Local Neoplasms Neoplasms, Experimental Neoplasms, Glandular and Epithelial Nerve Degeneration Nerve Sheath Neoplasms Neuralgia Neuroblastoma Obesity Ovarian Neoplasms Pancreatic Neoplasms Pituitary Neoplasms Poultry Diseases Precursor Cell Lymphoblastic Leukemia-Lymphoma Prostatic Neoplasms Psoriasis Pulmonary Embolism Retinoblastoma Schistosomiasis japonica Scrapie Sepsis Skin Neoplasms Small Cell Lung Carcinoma Stomach Neoplasms Stroke Thyroid Neoplasms Translocation, Genetic Trichuriasis Tuberculosis Urinary Bladder Neoplasms Uterine Cervical Neoplasms Uterine Neoplasms Uveal Neoplasms

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000206557 (TRIM71)

hsa-let-7a-5p

0.999999994819048

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

152-178

0.104965749415282

Position on chromosome:

3:32933456-32933482

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	AA_______A___CUUAAGUC________	3'
		__GUACAAC_UUG________CUACCUCA
		__.\|\|\|\|\|\|_.\|.________\|\|\|\|\|\|\|\|
		__UAUGUUG_GAU________GAUGGAGU
(miRNA)	3'	_A___________________________	5'

UTR3

8mer

240-258

0.128440395399228

Position on chromosome:

3:32933544-32933562

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	CUGUGAAGUG___AUU____U________	3'
		__________AUA___UCUA_CUACCUCA
		__________\|\|\|___.\|\|\|_\|\|\|\|\|\|\|\|
		__________UAU___GGAU_GAUGGAGU
(miRNA)	3'	_________A___GUU_____________	5'

UTR3

7mer

618-638

0.0225668143203981

Position on chromosome:

3:32933922-32933942

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AAUUUCCU____UC______UUUA_______	3'
		________CUGU____UCUG____UACCUCA
		________\|\|.\|____.\|\|.____\|\|\|\|\|\|\|
		________GAUA____GGAU____AUGGAGU
(miRNA)	3'	_______U____UGUU____G__________	5'

UTR3

6mer

1338-1357

0.00160969592611766

Position on chromosome:

3:32934642-32934661

Conserved species:

panTro2,rn4,mm9

Binding area:

(Transcript)	5'	UUGCACCCA_GC__UG__UUAGG______	3'
		_________G__CA__CU_____ACCUCA
		_________.__\|\|__\|\|_____\|\|\|\|\|\|
		_________U__GU__GA_____UGGAGU
(miRNA)	3'	________A_AU__UG__UGA________	5'

UTR3

6mer

2057-2062

0.001876282112773

Position on chromosome:

3:32935361-32935366

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CCAAAAUGGGAAGGAAAAAAAAA______	3'
		_______________________ACCUCA
		_______________________\|\|\|\|\|\|
		_______________________UGGAGU
(miRNA)	3'	______________________A______	5'

UTR3

8mer

2686-2710

0.0102536961711826

Position on chromosome:

3:32935990-32936014

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UAG_UG____GGU___AGA_________U	3'
		___G__UGUA___CAG___UACUACCUC_
		___.__\|.\|\|___\|\|.___\|\|\|\|\|\|\|\|\|_
		___U__AUAU___GUU___AUGAUGGAG_
(miRNA)	3'	____UG__________GG__________U	5'

UTR3

8mer

3989-4015

0.0450449809844509

Position on chromosome:

3:32937293-32937319

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CU_____CUUU___U__G__U________	3'
		__GACUG____UGC_GA_UU_CUACCUCA
		__.\|\|\|.____\|.\|_.\|_.\|_\|\|\|\|\|\|\|\|
		__UUGAU____AUG_UU_GA_GAUGGAGU
(miRNA)	3'	_________________G__U________	5'

UTR3

8mer

4015-4038

0.0198233090106662

Position on chromosome:

3:32937319-32937342

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	ACCUC___UGUG____G_CAU________	3'
		_____ACU____GCAA_U___CUACCUCA
		_____\|\|\|____.\|\|\|_.___\|\|\|\|\|\|\|\|
		_____UGA____UGUU_G___GAUGGAGU
(miRNA)	3'	____U___UA______G_AU_________	5'

UTR3

7mer

4098-4112

0.00237215676557593

Position on chromosome:

3:32937402-32937416

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	GCAGUGGGUGGGA___G__A__________U	3'
		_____________GUG_GA___GCUACCUC_
		_____________.\|._.\|___.\|\|\|\|\|\|\|_
		_____________UAU_UU___UGAUGGAG_
(miRNA)	3'	____________A___G__GGA________U	5'

UTR3

7mer

4795-4813

0.0146693413992914

Position on chromosome:

3:32938099-32938117

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UAUAAAUGUC___GU_AAGAAA_______	3'
		__________AUG__G______UACCUCA
		__________\|\|.__.______\|\|\|\|\|\|\|
		__________UAU__U______AUGGAGU
(miRNA)	3'	_________A___GU_GGAUG________	5'

UTR3

7mer

925-941

0.0188727773457825

Position on chromosome:

3:32915383-32915399

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCAUGGGGGCC_______CAU_______C	3'
		___________ACAGCUU___CUACCUC_
		___________\|\|\|.\|.\|___\|\|\|\|\|\|\|_
		___________UGUUGGA___GAUGGAG_
(miRNA)	3'	__________A_______U_________U	5'

ENSG00000182263 (FIGN)

hsa-let-7a-5p

0.999999967965059

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

6285-6299

0.040110047568918

Position on chromosome:

2:164465406-164465420

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	AAAGUGAUUGUGAU____________________	3'
		______________UUGUACAG_____UACCUCA
		______________.\|.\|\|\|\|._____\|\|\|\|\|\|\|
		______________GAUAUGUU_____AUGGAGU
(miRNA)	3'	_____________U________GGAUG_______	5'

UTR3

7mer

6198-6213

0.0225024140547264

Position on chromosome:

2:164465319-164465334

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2

Binding area:

(Transcript)	5'	ACUUUAUAUUAAA_____UG___________	3'
		_____________AUGUA__U__UUACCUCA
		_____________\|\|..\|__.__.\|\|\|\|\|\|\|
		_____________UAUGU__G__GAUGGAGU
(miRNA)	3'	____________A_____UG_AU________	5'

UTR3

8mer

5532-5556

0.0502496831570267

Position on chromosome:

2:164464653-164464677

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUA____U_____CUUUAUUU________	3'
		____GUGC__CCUG________CUACCUCA
		____.\|.\|__\|\|\|.________\|\|\|\|\|\|\|\|
		____UAUG__GGAU________GAUGGAGU
(miRNA)	3'	___A____UU____________________	5'

UTR3

6mer

5376-5395

0.00120087302654954

Position on chromosome:

2:164464497-164464516

Conserved species:

panTro2,mm9,dasNov2

Binding area:

(Transcript)	5'	CAUCAGCAU______________UCC______	3'
		_________UUGUG___CUUACU___ACCUCA
		_________.\|.\|.___\|.\|\|\|\|___\|\|\|\|\|\|
		_________GAUAU___GGAUGA___UGGAGU
(miRNA)	3'	________U_____GUU_______________	5'

UTR3

8mer

2037-2058

0.0974798729541372

Position on chromosome:

2:164461158-164461179

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CAUUGUU__U_______AUUU________	3'
		_______CU_UAUAACC____CUACCUCA
		_______\|\|_\|\|.\|\|\|\|____\|\|\|\|\|\|\|\|
		_______GA_AUGUUGG____GAUGGAGU
(miRNA)	3'	______U__U_______AU__________	5'

UTR3

8mer

1935-1954

0.0452141077427323

Position on chromosome:

2:164461056-164461075

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UUGUCCUUG____UGA____U___________	3'
		_________AACU___ACAG____CUACCUCA
		_________\|\|\|\|___\|\|\|.____\|\|\|\|\|\|\|\|
		_________UUGA___UGUU____GAUGGAGU
(miRNA)	3'	_____________UA_____GGAU________	5'

UTR3

7mer

28-41

0.0451015011813675

Position on chromosome:

2:164459149-164459162

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGGAAUAAGAAAAGA____G_A_________	3'
		_______________ACAA_C___UACCUCA
		_______________\|\|\|\|_\|___\|\|\|\|\|\|\|
		_______________UGUU_G___AUGGAGU
(miRNA)	3'	______________A____G_AUG_______	5'

UTR3

8mer

924-943

0.00714702187331479

Position on chromosome:

2:164466986-164467005

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AAGGCCCUG____C____UG_A_________	3'
		_________GACU___CG__C_GCUACCUCA
		_________.\|\|\|___\|.__\|_.\|\|\|\|\|\|\|\|
		_________UUGA___GU__G_UGAUGGAGU
(miRNA)	3'	_____________UAU__UG_A_________	5'

ENSG00000174498 (IGDCC3)

hsa-let-7a-5p

0.999999163327332

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1323-1350

0.0772829670094281

Position on chromosome:

15:65620788-65620815

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	U_____UUUGGCUCU____AC_________	3'
		_GCUGU_________CAGC___CUACCUCA
		_.\|\|.\|_________\|\|.\|___\|\|\|\|\|\|\|\|
		_UGAUA_________GUUG___GAUGGAGU
(miRNA)	3'	U_____U____________GAU________	5'

UTR3

8mer

1241-1256

0.0907470075650473

Position on chromosome:

15:65620706-65620721

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CCACAGAGCCCGA_________C________	3'
		_____________AUGCA__CU_CUACCUCA
		_____________\|\|.\|\|__\|\|_\|\|\|\|\|\|\|\|
		_____________UAUGU__GA_GAUGGAGU
(miRNA)	3'	____________A_____UG__U________	5'

UTR3

8mer

1090-1112

0.0701328274410637

Position on chromosome:

15:65620555-65620577

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	UCCAGA____AAAGAA___G__________	3'
		______UGUG______AAU_U_CUACCUCA
		______\|.\|.______\|\|._\|_\|\|\|\|\|\|\|\|
		______AUAU______UUG_A_GAUGGAGU
(miRNA)	3'	_____G____G________G_U________	5'

UTR3

7mer

1014-1035

0.00125746638452649

Position on chromosome:

15:65620479-65620500

Conserved species:

panTro2

Binding area:

(Transcript)	5'	CCCCUC___CCC______CAC_______U	3'
		______CUG___ACAGCC___CUACCUC_
		______\|\|.___\|\|\|.\|\|___\|\|\|\|\|\|\|_
		______GAU___UGUUGG___GAUGGAG_
(miRNA)	3'	_____U___A________AU________U	5'

ENSG00000187772 (LIN28B)

hsa-let-7a-5p

0.999998982936798

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

35-50

0.134145258562117

Position on chromosome:

6:105526694-105526709

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UCCUUUACCCGGU_____AGU_________	3'
		_____________UGCAA____CUACCUCA
		_____________\|.\|\|\|____\|\|\|\|\|\|\|\|
		_____________AUGUU____GAUGGAGU
(miRNA)	3'	____________U_____GGAU________	5'

UTR3

8mer

2456-2476

0.0203023175104853

Position on chromosome:

6:105529115-105529135

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUUAUGU____AUG_____A_________U	3'
		_______ACUG___AUAGU__ACUACCUC_
		_______\|\|\|.___\|.\|..__\|\|\|\|\|\|\|\|_
		_______UGAU___UGUUG__UGAUGGAG_
(miRNA)	3'	______U____A_______GA________U	5'

UTR3

8mer

2635-2659

0.0293232535229934

Position on chromosome:

6:105529294-105529318

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,galGal3,xenTro2

Binding area:

(Transcript)	5'	UACU___UU______AAAAG_________	3'
		____CUG__UACAGC_____GCUACCUCA
		____\|\|.__\|\|\|\|.\|_____.\|\|\|\|\|\|\|\|
		____GAU__AUGUUG_____UGAUGGAGU
(miRNA)	3'	___U___________GA____________	5'

UTR3

6mer

3207-3234

0.00154371105161635

Position on chromosome:

6:105529866-105529893

Conserved species:

panTro2,rheMac2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	U_____AAUUAAGUU_______UG______	3'
		_CUGUG_________AUCU_CU__ACCUCA
		_\|\|.\|._________\|.\|\|_\|\|__\|\|\|\|\|\|
		_GAUAU_________UGGA_GA__UGGAGU
(miRNA)	3'	U_____GU___________U__________	5'

UTR3

8mer

4081-4097

0.0517286984885489

Position on chromosome:

6:105530740-105530756

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,galGal3,xenTro2

Binding area:

(Transcript)	5'	GCUUGAAAAUG___GU___G________U	3'
		___________AUG__GUU_ACUACCUC_
		___________\|\|.__..._\|\|\|\|\|\|\|\|_
		___________UAU__UGG_UGAUGGAG_
(miRNA)	3'	__________A___GU___A________U	5'

UTR3

7mer

4259-4282

0.0272721158984076

Position on chromosome:

6:105530918-105530941

Conserved species:

panTro2,rheMac2,mm9,oryCun2,canFam2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	UUAUC_________AUUUAG_________	3'
		_____CUGUGUAGU______AUUACCUCA
		_____\|\|.\|..\|..______\|.\|\|\|\|\|\|\|
		_____GAUAUGUUG______UGAUGGAGU
(miRNA)	3'	____U_________GA_____________	5'

UTR3

7mer

411-435

0.0261504884538754

Position on chromosome:

6:105526317-105526341

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	CAU__UG___AGGAAUGUAGU_______C	3'
		___CA__CUA___________CUACCUC_
		___\|\|__\|\|\|___________\|\|\|\|\|\|\|_
		___GU__GAU___________GAUGGAG_
(miRNA)	3'	__U__UG_____________________U	5'

ENSG00000180667 (YOD1)

hsa-let-7a-5p

0.999995374109649

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

5135-5153

0.198147138832692

Position on chromosome:

1:207222329-207222347

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUGAAUGAGG__UG__G____________	3'
		__________GU__AA_CCUACUACCUCA
		__________.\|__\|\|_\|\|\|\|\|\|\|\|\|\|\|\|
		__________UA__UU_GGAUGAUGGAGU
(miRNA)	3'	_________A__UG_______________	5'

UTR3

7mer

3781-3793

0.0120529791699094

Position on chromosome:

1:207220975-207220987

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAUCUUCCAGAUAAA_____U_______U	3'
		_______________AGUUU_CUACCUC_
		_______________\|...\|_\|\|\|\|\|\|\|_
		_______________UUGGA_GAUGGAG_
(miRNA)	3'	______________G_____U_______U	5'

UTR3

6mer

2297-2324

0.00127207752777496

Position on chromosome:

1:207219491-207219518

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	U____GUG____AG__AAUAAAG______	3'
		_AUUA___GCAA__UG_______ACCUCA
		_\|.\|\|___.\|\|\|__\|._______\|\|\|\|\|\|
		_UGAU___UGUU__AU_______UGGAGU
(miRNA)	3'	U____A______GG__GA___________	5'

ENSG00000136603 (SKIL)

hsa-let-7a-5p

0.999994072630017

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

3818-3831

0.0220147925902079

Position on chromosome:

3:170114024-170114037

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AGAUUUUUUUCCUCA______A___________	3'
		_______________AUAUAG_____UACCUCA
		_______________\|\|\|.\|._____\|\|\|\|\|\|\|
		_______________UAUGUU_____AUGGAGU
(miRNA)	3'	______________A______GGAUG_______	5'

UTR3

8mer

4182-4198

0.127550015577462

Position on chromosome:

3:170114388-170114404

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CAUGACACAGAA______________________	3'
		____________AACUGU____CCU_CUACCUCA
		____________\|\|\|\|.\|____\|\|\|_\|\|\|\|\|\|\|\|
		____________UUGAUA____GGA_GAUGGAGU
(miRNA)	3'	__________________UGUU___U________	5'

UTR3

7mer

4298-4321

0.0578555089716579

Position on chromosome:

3:170114504-170114527

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GACAU_______UCUG______________	3'
		_____ACUGUGC____AGCUUA_UACCUCA
		_____\|\|\|.\|.\|____\|.\|.\|\|_\|\|\|\|\|\|\|
		_____UGAUAUG____UUGGAU_AUGGAGU
(miRNA)	3'	____U_________________G_______	5'

ENSG00000120094 (HOXB1)

hsa-let-7a-5p

0.999993628849361

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

359-386

0.00409056144691911

Position on chromosome:

17:46606247-46606274

Conserved species:

panTro2,rheMac2,canFam2,loxAfr3

Binding area:

(Transcript)	5'	A_______CUCCUCACACCAGCG______	3'
		_GACCUGC_______________ACCUCA
		_.\|\|\|\|.\|_______________\|\|\|\|\|\|
		_UUGGAUG_______________UGGAGU
(miRNA)	3'	G_______A____________________	5'

UTR3

9mer

27-46

0.20214972369965

Position on chromosome:

17:46605915-46605934

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GGGUUCUCU___________GCA_________	3'
		_________CUGU___ACCU___ACUACCUCA
		_________\|\|.\|___\|\|\|\|___\|\|\|\|\|\|\|\|\|
		_________GAUA___UGGA___UGAUGGAGU
(miRNA)	3'	________U____UGU________________	5'

ENSG00000164692 (COL1A2)

hsa-let-7a-5p

0.999992753784761

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

359-384

0.204136817413237

Position on chromosome:

7:94060065-94060090

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CCA____UCCAA__G__UAA_________	3'
		___AACU_____AG_UU___ACUACCUCA
		___\|\|\|\|_____\|._.\|___\|\|\|\|\|\|\|\|\|
		___UUGA_____UU_GA___UGAUGGAGU
(miRNA)	3'	_______UAUG___G______________	5'

ENSG00000088756 (ARHGAP28)

hsa-let-7a-5p

0.999990436325123

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

2784-2805

0.199601451795833

Position on chromosome:

18:6914938-6914959

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	ACAACGU_________AUAA_________	3'
		_______CUAUACAGU____ACUACCUCA
		_______\|\|\|\|\|\|\|..____\|\|\|\|\|\|\|\|\|
		_______GAUAUGUUG____UGAUGGAGU
(miRNA)	3'	______U_________GA___________	5'

ENSG00000156273 (BACH1)

hsa-let-7a-5p

0.999987895175851

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1963-1987

0.0598048004434636

Position on chromosome:

21:30717118-30717142

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCCA___G____CUUGAUUUC________	3'
		____AUG_AACC_________CUACCUCA
		____\|\|._\|\|\|\|_________\|\|\|\|\|\|\|\|
		____UAU_UUGG_________GAUGGAGU
(miRNA)	3'	___A___G____AU_______________	5'

UTR3

9mer

2265-2287

0.135945452068722

Position on chromosome:

21:30717420-30717442

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CAUGUA______GUAA__AC_________	3'
		______AUACAA____CU__ACUACCUCA
		______\|\|\|\|\|\|____\|\|__\|\|\|\|\|\|\|\|\|
		______UAUGUU____GA__UGAUGGAGU
(miRNA)	3'	_____A______G________________	5'

ENSG00000148200 (NR6A1)

hsa-let-7a-5p

0.999987597303543

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

5035-5058

0.134756019904805

Position on chromosome:

9:127284589-127284612

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,danRer6

Binding area:

(Transcript)	5'	CCAUA_UG_UG____AGAUG_________	3'
		_____A__U__ACAA_____ACUACCUCA
		_____\|__\|__\|\|\|\|_____\|\|\|\|\|\|\|\|\|
		_____U__A__UGUU_____UGAUGGAGU
(miRNA)	3'	______UG_UA____GGA___________	5'

UTR3

9mer

4064-4082

0.0249407125964053

Position on chromosome:

9:127283618-127283636

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	GAAGGGAAGG_G_____UAA_________	3'
		__________G_GGCUU___ACUACCUCA
		__________._..\|.\|___\|\|\|\|\|\|\|\|\|
		__________U_UUGGA___UGAUGGAGU
(miRNA)	3'	_________A_G_________________	5'

UTR3

7mer

4037-4054

0.000818196354503465

Position on chromosome:

9:127283591-127283608

Conserved species:

panTro2,rheMac2,loxAfr3

Binding area:

(Transcript)	5'	AGGUUCCUAA__GC_C_G__________U	3'
		__________UG__C_G_CUGCUACCUC_
		__________\|.__\|_._\|\|.\|\|\|\|\|\|\|_
		__________AU__G_U_GAUGAUGGAG_
(miRNA)	3'	_________G__AU_U_G__________U	5'

UTR3

8mer

674-681

0.035452725620644

Position on chromosome:

9:127280228-127280235

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CCAUGAAAAAGAAAAAAAAA________U	3'
		____________________ACUACCUC_
		____________________\|\|\|\|\|\|\|\|_
		____________________UGAUGGAG_
(miRNA)	3'	___________________A________U	5'

UTR3

7mer

142-166

0.0113296068705876

Position on chromosome:

9:127279696-127279720

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GCA_____CC___GCCC___________C	3'
		___GGCUA__CAG____UCUGCUACCUC_
		___..\|\|\|__\|\|.____.\|\|.\|\|\|\|\|\|\|_
		___UUGAU__GUU____GGAUGAUGGAG_
(miRNA)	3'	________AU__________________U	5'

UTR3

7mer

318-333

0.0155448867118317

Position on chromosome:

9:127289134-127289149

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GGAGGUGAUCGA__GG__CAU_______U	3'
		____________GC__CU___CUACCUC_
		____________.\|__\|.___\|\|\|\|\|\|\|_
		____________UG__GG___GAUGGAG_
(miRNA)	3'	___________A__UU__AU________U	5'

ENSG00000214575 (CPEB1)

hsa-let-7a-5p

0.999983820329857

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

96-120

0.191007964953601

Position on chromosome:

15:83212047-83212071

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GUGA_______UGUGA______________	3'
		____AGCUGUG_____AGUCU_CUACCUCA
		____\|.\|\|.\|._____\|..\|\|_\|\|\|\|\|\|\|\|
		____UUGAUAU_____UUGGA_GAUGGAGU
(miRNA)	3'	___________G_________U________	5'

ENSG00000011566 (MAP4K3)

hsa-let-7a-5p

0.999975761280879

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

289-308

0.199918026374909

Position on chromosome:

2:39476696-39476715

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AUGGCCAAA_____UUAG___________	3'
		_________AUAAU____UUACUACCUCA
		_________\|.\|\|.____.\|\|\|\|\|\|\|\|\|\|
		_________UGUUG____GAUGAUGGAGU
(miRNA)	3'	________A____________________	5'

UTR3

7mer

397-420

0.0212896549935197

Position on chromosome:

2:39487767-39487790

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	UUGA___GGU______CAAAUU_______U	3'
		____GAC____CAAUC______CUACCUC_
		____.\|\|____\|\|\|.\|______\|\|\|\|\|\|\|_
		____UUG____GUUGG______GAUGGAG_
(miRNA)	3'	_______AUAU_____AU___________U	5'

ENSG00000159217 (IGF2BP1)

hsa-let-7a-5p

0.999970639609898

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

425-450

0.00569252115217323

Position on chromosome:

17:47127232-47127257

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	CU___UGG_____UGA___AAA______C	3'
		__ACU___GUAAU___UUA___UACCUC_
		__\|\|\|___..\|\|.___.\|\|___\|\|\|\|\|\|_
		__UGA___UGUUG___GAU___AUGGAG_
(miRNA)	3'	_U___UA____________G________U	5'

UTR3

9mer

1618-1638

0.0678387545620937

Position on chromosome:

17:47128425-47128445

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	CAAUGCUG_______AGUAA_________	3'
		________UGUGCGA_____ACUACCUCA
		________\|.\|.\|.\|_____\|\|\|\|\|\|\|\|\|
		________AUAUGUU_____UGAUGGAGU
(miRNA)	3'	_______G_______GGA___________	5'

UTR3

7mer

1629-1656

0.00517615575104064

Position on chromosome:

17:47128436-47128463

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2

Binding area:

(Transcript)	5'	A_____________CAAGGUAUGAA_________	3'
		_AACU_____ACCU___________GUUACCUCA
		_\|\|\|\|_____\|\|\|\|___________..\|\|\|\|\|\|\|
		_UUGA_____UGGA___________UGAUGGAGU
(miRNA)	3'	_____UAUGU________________________	5'

UTR3

9mer

4250-4275

0.02187796281688

Position on chromosome:

17:47131057-47131082

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	GGG___CAGCA_UG__AGUA_________	3'
		___AAC_____G__CU____ACUACCUCA
		___\|\|\|_____.__\|\|____\|\|\|\|\|\|\|\|\|
		___UUG_____U__GA____UGAUGGAGU
(miRNA)	3'	______AUAUG_UG_______________	5'

UTR3

9mer

4903-4929

0.0553710395942845

Position on chromosome:

17:47131710-47131736

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	CU__GA______AUGGA__A_________	3'
		__AC__GUAUAA_____UU_ACUACCUCA
		__\|\|__.\|\|.\|\|_____.\|_\|\|\|\|\|\|\|\|\|
		__UG__UAUGUU_____GA_UGAUGGAGU
(miRNA)	3'	_U__A_______G________________	5'

UTR3

7mer

5554-5573

0.0253121035400271

Position on chromosome:

17:47132361-47132380

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,danRer6

Binding area:

(Transcript)	5'	CCCAUUUC___UUUGU_____U_______U	3'
		________ACU______UUUA_CUACCUC_
		________\|\|\|______..\|\|_\|\|\|\|\|\|\|_
		________UGA______GGAU_GAUGGAG_
(miRNA)	3'	_______U___UAUGUU____________U	5'

ENSG00000179361 (ARID3B)

hsa-let-7a-5p

0.99993580123099

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

51-73

0.0477079907121973

Position on chromosome:

15:74888167-74888189

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AAGGAA__UG_UG_ACAGAAU________	3'
		______GU__A__C_______UUACCUCA
		______.\|__\|__\|_______.\|\|\|\|\|\|\|
		______UA__U__G_______GAUGGAGU
(miRNA)	3'	_____A__UG_UG_AU_____________	5'

UTR3

6mer

720-742

0.00284157666670106

Position on chromosome:

15:74888836-74888858

Conserved species:

rheMac2,bosTau4,canFam2,dasNov2

Binding area:

(Transcript)	5'	CAUUCU___ACC__CC__GC_AA______	3'
		______CUG___GC__CC__C__ACCUCA
		______\|\|.___.\|__\|\|__\|__\|\|\|\|\|\|
		______GAU___UG__GG__G__UGGAGU
(miRNA)	3'	_____U___A____UU__AU_A_______	5'

UTR3

7mer

925-938

0.0181269804774483

Position on chromosome:

15:74889041-74889054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GCCGAUGUCAGGUUC__UG__A___________	3'
		_______________AU__AA_____UACCUCA
		_______________\|\|__\|\|_____\|\|\|\|\|\|\|
		_______________UA__UU_____AUGGAGU
(miRNA)	3'	______________A__UG__GGAUG_______	5'

UTR3

7mer

1635-1659

0.0214380030478326

Position on chromosome:

15:74889751-74889775

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CAAA____UGAGC____ACAGA_______	3'
		____AGCU_____ACAA_____UACCUCA
		____\|.\|\|_____\|\|\|\|_____\|\|\|\|\|\|\|
		____UUGA_____UGUU_____AUGGAGU
(miRNA)	3'	________UA_______GGAUG_______	5'

UTR3

7mer

2231-2257

0.0411850384644065

Position on chromosome:

15:74890347-74890373

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GG_______GGCAGUGAGUAAA_______	3'
		__UAGCCUA_____________UACCUCA
		__.\|.\|\|\|\|_____________\|\|\|\|\|\|\|
		__GUUGGAU_____________AUGGAGU
(miRNA)	3'	_U_______G___________________	5'

UTR3

7mer

2323-2347

0.0459877076628925

Position on chromosome:

15:74890439-74890463

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UGU______UUCAAUA_____________U	3'
		___UUAUAU_______AACCU_CUACCUC_
		___.\|\|\|\|._______\|\|\|\|\|_\|\|\|\|\|\|\|_
		___GAUAUG_______UUGGA_GAUGGAG_
(miRNA)	3'	__U__________________U_______U	5'

UTR3

8mer

1612-1634

0.0144949155511932

Position on chromosome:

15:74888045-74888067

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCUCUC_____U_____AAGUC________	3'
		______ACUGU_C_ACC_____CUACCUCA
		______\|\|\|.\|_\|_\|\|\|_____\|\|\|\|\|\|\|\|
		______UGAUA_G_UGG_____GAUGGAGU
(miRNA)	3'	_____U_____U_U___AU___________	5'

ENSG00000214376 (VSTM5)

hsa-let-7a-5p

0.999933254558021

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

2305-2332

0.148028441296498

Position on chromosome:

11:93553703-93553730

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	A______________ACUGCAUUC________	3'
		_GGCUG___GGCCUG_________CUACCUCA
		_..\|\|.___..\|\|\|._________\|\|\|\|\|\|\|\|
		_UUGAU___UUGGAU_________GAUGGAGU
(miRNA)	3'	______AUG_______________________	5'

UTR3

8mer+wobble

1801-1825

0.00364464932007861

Position on chromosome:

11:93553199-93553223

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	CUGA____UUUAG________________	3'
		____GGCU_____ACAAUCUGCUGCCUCA
		____..\|\|_____\|\|\|\|.\|\|.\|\|.\|\|\|\|\|
		____UUGA_____UGUUGGAUGAUGGAGU
(miRNA)	3'	________UA___________________	5'

UTR3

8mer

1354-1377

0.0161725381662307

Position on chromosome:

11:93552752-93552775

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,loxAfr3

Binding area:

(Transcript)	5'	UGAGG___GC_UG_C___UGC________	3'
		_____AAC__U__G_CCU___CUACCUCA
		_____\|\|\|__\|__._\|\|\|___\|\|\|\|\|\|\|\|
		_____UUG__A__U_GGA___GAUGGAGU
(miRNA)	3'	________AU_UG_U___U__________	5'

ENSG00000189050 (RNFT1)

hsa-let-7a-5p

0.999914924002328

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

892-914

0.163879323645855

Position on chromosome:

17:58034593-58034615

Conserved species:

panTro2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	UGGGAU____C__GG___UACU________	3'
		______ACUG__U__CUU____CUACCUCA
		______\|\|\|.__.__\|.\|____\|\|\|\|\|\|\|\|
		______UGAU__G__GGA____GAUGGAGU
(miRNA)	3'	_____U____AU_UU___U___________	5'

ENSG00000135316 (SYNCRIP)

hsa-let-7a-5p

0.999910551595239

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

3930-3946

0.132108409861475

Position on chromosome:

6:86321983-86321999

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CUUUUUAAAAGG__UG_UUA__________	3'
		____________GU__G____ACUACCUCA
		____________.\|__.____\|\|\|\|\|\|\|\|\|
		____________UA__U____UGAUGGAGU
(miRNA)	3'	___________A__UG_UGGA_________	5'

UTR3

6mer

163-185

0.00701978443783803

Position on chromosome:

6:86318216-86318238

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	UGAAGU_____CUUUU___A_AA______	3'
		______ACUGU_____GCC_A__ACCUCA
		______\|\|\|.\|_____.\|\|_\|__\|\|\|\|\|\|
		______UGAUA_____UGG_U__UGGAGU
(miRNA)	3'	_____U_____UGU_____A_GA______	5'

UTR3

8mer+wobble

80-100

0.023931947671249

Position on chromosome:

6:86318133-86318153

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	AAACUAU______U____GU________U	3'
		_______CUGUAC_AUCU__ACUGCCUC_
		_______\|\|.\|\|\|_\|.\|\|__\|\|\|.\|\|\|\|_
		_______GAUAUG_UGGA__UGAUGGAG_
(miRNA)	3'	______U______U______________U	5'

ENSG00000166450 (PRTG)

hsa-let-7a-5p

0.999907254320199

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

8047-8067

0.096284465940886

Position on chromosome:

15:55911791-55911811

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GAAAGCCC__U___UGA___U________	3'
		________CU_UGC___CUA_CUACCUCA
		________\|\|_\|.\|___\|\|\|_\|\|\|\|\|\|\|\|
		________GA_AUG___GAU_GAUGGAGU
(miRNA)	3'	_______U__U___UUG____________	5'

UTR3

7mer

8005-8031

0.0125121316231457

Position on chromosome:

15:55911749-55911775

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,echTel1

Binding area:

(Transcript)	5'	CA____CUGAAG_______U_________	3'
		__AACU______ACAACUU_GUUACCUCA
		__\|\|\|\|______\|\|\|\|\|.\|_..\|\|\|\|\|\|\|
		__UUGA______UGUUGGA_UGAUGGAGU
(miRNA)	3'	______UA_____________________	5'

UTR3

6mer

7811-7829

0.00327384104732251

Position on chromosome:

15:55911555-55911573

Conserved species:

panTro2,rheMac2,canFam2,monDom5

Binding area:

(Transcript)	5'	CUGCAUGGU___G____G__CA______U	3'
		_________UUG_AUAA_UU__UACCUC_
		_________.\|._\|.\|\|_.\|__\|\|\|\|\|\|_
		_________GAU_UGUU_GA__AUGGAG_
(miRNA)	3'	________U___A____G__UG______U	5'

UTR3

6mer

7617-7643

0.00227374796100293

Position on chromosome:

15:55911361-55911387

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2

Binding area:

(Transcript)	5'	GU___U___CU_____AUCCCAA______	3'
		__GCU_UAU__CCUAU_______ACCUCA
		__.\|\|_\|\|.__\|\|\|\|._______\|\|\|\|\|\|
		__UGA_AUG__GGAUG_______UGGAGU
(miRNA)	3'	_U___U___UU_____A____________	5'

UTR3

8mer

6476-6503

0.041453204545855

Position on chromosome:

15:55910220-55910247

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	___U_______CCUGUUUUA_________C	3'
		_CU_UAUAGCU_________UACUACCUC_
		_\|\|_\|\|.\|.\|._________\|\|\|\|\|\|\|\|\|_
		_GA_AUGUUGG_________AUGAUGGAG_
(miRNA)	3'	U__U_________________________U	5'

UTR3

6mer

5145-5161

0.00409215427115832

Position on chromosome:

15:55908889-55908905

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	AAAAACCAAAG____UUAAG________C	3'
		___________AUAU_____GUUACCUC_
		___________\|\|\|._____..\|\|\|\|\|\|_
		___________UAUG_____UGAUGGAG_
(miRNA)	3'	__________A____UUGGA________U	5'

UTR3

6mer

4903-4923

0.00113980339177427

Position on chromosome:

15:55908647-55908667

Conserved species:

rheMac2

Binding area:

(Transcript)	5'	UUUAUGU_____AGUAUUA__G______U	3'
		_______UGCAG_______UG_UACCUC_
		_______\|.\|\|._______\|._\|\|\|\|\|\|_
		_______AUGUU_______AU_AUGGAG_
(miRNA)	3'	______U_____GG_______G______U	5'

UTR3

6mer

2956-2983

0.00143910227233164

Position on chromosome:

15:55906700-55906727

Conserved species:

panTro2,rheMac2,bosTau4

Binding area:

(Transcript)	5'	U____GGGAA__G___GGGGAAG______	3'
		_GCUG_____GA_UUG_______ACCUCA
		_.\|\|._____.\|_.\|._______\|\|\|\|\|\|
		_UGAU_____UU_GAU_______UGGAGU
(miRNA)	3'	U____AUG____G___GA___________	5'

ENSG00000110888 (CAPRIN2)

hsa-let-7a-5p

0.999896164908462

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

5880-5896

0.147679818090473

Position on chromosome:

12:30887948-30887964

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	UUUGCCUUCAAA_G_____G_________	3'
		____________A_AACUU_ACUACCUCA
		____________\|_\|\|\|.\|_\|\|\|\|\|\|\|\|\|
		____________U_UUGGA_UGAUGGAGU
(miRNA)	3'	___________A_G_______________	5'

UTR3

6mer

4590-4607

0.00142644137028504

Position on chromosome:

12:30873757-30873774

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4

Binding area:

(Transcript)	5'	CUGGAUCUGAA____AG_____G______	3'
		___________ACAG__UUUAU_ACCUCA
		___________\|\|\|.__..\|\|._\|\|\|\|\|\|
		___________UGUU__GGAUG_UGGAGU
(miRNA)	3'	__________A___________A______	5'

UTR3

7mer

1615-1633

0.00464745276181776

Position on chromosome:

12:30868380-30868398

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	UUCUGAAAAU_____C_______A_G_______	3'
		__________GACUG_____UCU_G_UACCUCA
		__________.\|\|\|._____.\|\|_._\|\|\|\|\|\|\|
		__________UUGAU_____GGA_U_AUGGAGU
(miRNA)	3'	_______________AUGUU_____G_______	5'

UTR3

6mer

541-557

0.00686862510469551

Position on chromosome:

12:30863027-30863043

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3,xenTro2,danRer6

Binding area:

(Transcript)	5'	AGUGAAUGUGCC_______GU_A__________	3'
		____________ACUGUAU__C_____ACCUCA
		____________\|\|\|.\|\|.__\|_____\|\|\|\|\|\|
		____________UGAUAUG__G_____UGGAGU
(miRNA)	3'	___________U_______UU_GAUGA______	5'

ENSG00000075624 (ACTB)

hsa-let-7a-5p

0.99988831379023

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1152-1179

0.159430910606606

Position on chromosome:

7:5568146-5568173

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	G____GC__GG____GACUG_________	3'
		_GCUG__CG__ACCU_____ACUACCUCA
		_.\|\|.__\|.__\|\|\|\|_____\|\|\|\|\|\|\|\|\|
		_UGAU__GU__UGGA_____UGAUGGAGU
(miRNA)	3'	U____AU______________________	5'

ENSG00000261609 (GAN)

hsa-let-7a-5p

0.999849540716418

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

1123-1145

0.103935464009705

Position on chromosome:

16:81412325-81412347

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAGUUU____G___G___AA_________	3'
		______GGCU_GUA_AAU__ACUACCUCA
		______..\|\|_.\|\|_\|\|.__\|\|\|\|\|\|\|\|\|
		______UUGA_UAU_UUG__UGAUGGAGU
(miRNA)	3'	______________G___GA_________	5'

UTR3

8mer

3635-3650

0.00668202595420053

Position on chromosome:

16:81414837-81414852

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AGAGUUCCCUUUG_____U____________	3'
		_____________GUACA_UC__CUACCUCA
		_____________.\|\|\|\|_.\|__\|\|\|\|\|\|\|\|
		_____________UAUGU_GG__GAUGGAGU
(miRNA)	3'	____________A_____U__AU________	5'

UTR3

8mer

6544-6565

0.0210375314400432

Position on chromosome:

16:81417746-81417767

Conserved species:

panTro2,oryCun2,canFam2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	UAGGAAA____C___UC__A_________	3'
		_______AACU_UGU__UC_GCUACCUCA
		_______\|\|\|\|_\|..__.\|_.\|\|\|\|\|\|\|\|
		_______UUGA_AUG__GG_UGAUGGAGU
(miRNA)	3'	___________U___UU__A_________	5'

UTR3

8mer+wobble

8383-8406

0.00168039470935798

Position on chromosome:

16:81419585-81419608

Conserved species:

panTro2

Binding area:

(Transcript)	5'	UCCUG____CAG____U__GC________	3'
		_____AGCU___GCAA_CC__CUGCCUCA
		_____\|.\|\|___.\|\|\|_\|\|__\|\|.\|\|\|\|\|
		_____UUGA___UGUU_GG__GAUGGAGU
(miRNA)	3'	_________UA________AU________	5'

UTR3

9mer

10988-11009

0.0162141067722516

Position on chromosome:

16:81422190-81422211

Conserved species:

panTro2,rheMac2,rn4,mm9,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GGCAGGC____GCC__GCUC_________	3'
		_______ACAG___CC____ACUACCUCA
		_______\|\|\|.___\|\|____\|\|\|\|\|\|\|\|\|
		_______UGUU___GG____UGAUGGAGU
(miRNA)	3'	______A_________A____________	5'

UTR3

7mer

11473-11498

0.00501026885254655

Position on chromosome:

16:81422675-81422700

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	AUA___UCUUUUU____GAUCG_______	3'
		___ACA_______CCUA_____UACCUCA
		___\|\|\|_______\|\|\|\|_____\|\|\|\|\|\|\|
		___UGU_______GGAU_____AUGGAGU
(miRNA)	3'	__A___U__________G___________	5'

ENSG00000008323 (PLEKHG6)

hsa-let-7a-5p

0.999745872009717

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

76-91

0.150033826341337

Position on chromosome:

12:6437388-6437403

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CACCCUCCGGCAU_____A______________	3'
		_____________CUGUG____CU_CUACCUCA
		_____________\|\|.\|.____\|\|_\|\|\|\|\|\|\|\|
		_____________GAUAU____GA_GAUGGAGU
(miRNA)	3'	____________U_____GUUG__U________	5'

UTR3

7mer

328-347

0.00876064235766456

Position on chromosome:

12:6436488-6436507

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	AUGCUCCCC______CAGA__A_______	3'
		_________UUGUGC____UG_UACCUCA
		_________.\|.\|.\|____\|._\|\|\|\|\|\|\|
		_________GAUAUG____AU_AUGGAGU
(miRNA)	3'	________U______UUGG__G_______	5'

ENSG00000173065 (FAM222B)

hsa-let-7a-5p

0.999709673991996

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

1841-1860

0.104613768966387

Position on chromosome:

17:27086236-27086255

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2,danRer6

Binding area:

(Transcript)	5'	CCCCCCCGA________GUGU________	3'
		_________AUGUGACC____CUACCUCA
		_________\|\|...\|\|\|____\|\|\|\|\|\|\|\|
		_________UAUGUUGG____GAUGGAGU
(miRNA)	3'	________A________AU__________	5'

UTR3

9mer

1724-1751

0.0357360306533259

Position on chromosome:

17:27086119-27086146

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,galGal3

Binding area:

(Transcript)	5'	A___GAGG____G_AUCAGC_________	3'
		_GAC____GCAG_C______ACUACCUCA
		_.\|\|____.\|\|._\|______\|\|\|\|\|\|\|\|\|
		_UUG____UGUU_G______UGAUGGAGU
(miRNA)	3'	____AUA_____G_A______________	5'

UTR3

6mer

1501-1522

0.0034646320340314

Position on chromosome:

17:27085896-27085917

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	CGUCCCC____GC__C____GCG______	3'
		_______ACUG__UA_CCUA___ACCUCA
		_______\|\|\|.__.\|_\|\|\|\|___\|\|\|\|\|\|
		_______UGAU__GU_GGAU___UGGAGU
(miRNA)	3'	______U____AU__U____GA_______	5'

ENSG00000143190 (POU2F1)

hsa-let-7a-5p

0.999708902009781

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

665-684

0.094260593386262

Position on chromosome:

1:167353114-167353133

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GCGCAAAAU__UC_____G_A_________	3'
		_________CU___UAAC_C_ACUACCUCA
		_________\|\|___.\|\|\|_\|_\|\|\|\|\|\|\|\|\|
		_________GA___GUUG_G_UGAUGGAGU
(miRNA)	3'	________U__UAU______A_________	5'

UTR3

6mer

978-998

0.00387983254818139

Position on chromosome:

1:167365587-167365607

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	CAUCUCUC____UGA______UGA______	3'
		________GAUU____AGCCU___ACCUCA
		________.\|.\|____\|.\|\|\|___\|\|\|\|\|\|
		________UUGA____UUGGA___UGGAGU
(miRNA)	3'	____________UAUG_____UGA______	5'

UTR3

7mer

1189-1213

0.0111024295387906

Position on chromosome:

1:167367364;167368423-167367370;167368440

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GUUU__UGG_G____AAAAGC________	3'
		____CU___A_AAUC______CUACCUCG
		____\|\|___\|_\|\|.\|______\|\|\|\|\|\|\|.
		____GA___U_UUGG______GAUGGAGU
(miRNA)	3'	___U__UA__G____AU____________	5'

UTR3

6mer

6382-6394

0.00238648473724916

Position on chromosome:

1:167389202-167389214

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,echTel1

Binding area:

(Transcript)	5'	GGGGGAAAAAAAAGC______A________U	3'
		_______________ACAACU___UACCUC_
		_______________\|\|\|\|\|.___\|\|\|\|\|\|_
		_______________UGUUGG___AUGGAG_
(miRNA)	3'	______________A______AUG______U	5'

UTR3

7mer

8103-8131

0.0126733421755988

Position on chromosome:

1:167390923-167390951

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	____UCUG_______UCAUAAAA_______	3'
		AGCU____GC_ACCU________UACCUCA
		\|.\|\|____.\|_\|\|\|\|________\|\|\|\|\|\|\|
		UUGA____UG_UGGA________AUGGAGU
(miRNA)	3'	____UA____U____UG_____________	5'

UTR3

6mer

8906-8924

0.0006428600930538

Position on chromosome:

1:167391726-167391744

Conserved species:

panTro2,rheMac2,oryCun2

Binding area:

(Transcript)	5'	AGAAGUUGAA_______________CC______	3'
		__________AGCUA____ACCUGC__ACCUCA
		__________\|.\|\|\|____\|\|\|\|.\|__\|\|\|\|\|\|
		__________UUGAU____UGGAUG__UGGAGU
(miRNA)	3'	_______________AUGU______A_______	5'

UTR3

6mer

10745-10764

0.00113586997328034

Position on chromosome:

1:167393565-167393584

Conserved species:

panTro2,rheMac2,rn4,mm9,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	GAAAGAAA____UC_______C_______U	3'
		________GACU___CAGCUU_UUACCUC_
		________.\|\|\|___\|\|.\|.\|