DIANA TOOLS - MicroT-CDS

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Results: 252 targets with miRNAs found in genes ENSG00000167081

. Threshold is set to 0.7.

Gene ID:	PBX3
Expression:	lymph node,prefrontal cortex,H1-hESC,breast,appendix,HUVEC cell line,HSMM cell line,liver,salivary gland,temporal lobe,HMEC cell line,gall bladder,K562,IMR-90,MCF-7,adrenal gland,brain,HepG2,BJ,small intestine,HeLa-S3,colon,esophagus,placenta,NHLF cell line,A549,adrenal,SK-N-SH_RA,leukocyte,adipose tissue,cerebellum,ovary,SK-N-SH,stomach,bone marrow,kidney,pancreas,frontal lobe,cerebral cortex,GM12878,skin,skeletal muscle,NHEK cell line,heart,animal ovary,prostate,lung,thyroid,CD20-positive B ce
External Gene ID:	ENSG00000167081
Description:
Chromosome:	9
DIANA resources:	microT v4 microT-CDS

Ensembl Gene Id

miRNA name

miTG score

Also Predicted

ENSG00000167081 (PBX3)

hsa-miR-101-3p

0.999578494914652

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

225-242

0.0292898789944042

Position on chromosome:

9:128728292-128728309

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UGUAGCCCACC___U____CUU_______	3'
		___________AUC_ACAG___UACUGUA
		___________\|\|\|_\|\|\|\|___\|\|\|\|\|\|\|
		___________UAG_UGUC___AUGACAU
(miRNA)	3'	__________A__________________	5'

UTR3

9mer

1345-1363

0.108428935797395

Position on chromosome:

9:128729412-128729430

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,dasNov2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GCAUUCAGAU_____________________	3'
		__________UUCAG_UAUU_CAGUACUGUA
		__________\|\|\|\|\|_\|\|\|._\|\|\|\|\|\|\|\|\|\|
		__________AAGUC_AUAG_GUCAUGACAU
(miRNA)	3'	_______________A____U__________	5'

ENSG00000167081 (PBX3)

hsa-miR-541-3p

0.999251556645007

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

201-225

0.116440943105924

Position on chromosome:

9:128728268-128728292

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAAA__GAA__CGU______A________	3'
		____AG___AG___UUUUGU_GCCCACCA
		____\|\|___\|\|___\|\|.\|\|\|_\|\|\|\|\|\|\|\|
		____UC___UC___AAGACA_CGGGUGGU
(miRNA)	3'	______AGG__U_________________	5'

UTR3

7mer

943-962

0.0189323036694289

Position on chromosome:

9:128729010-128729029

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	UAGCAAAAG___AUUUAUACAU_________	3'
		_________AGU____________CCCACCA
		_________\|\|\|____________\|\|\|\|\|\|\|
		_________UCA____________GGGUGGU
(miRNA)	3'	____________GGUCUAAGACAC_______	5'

UTR3

8mer

977-996

0.0183993472115133

Position on chromosome:

9:128723097-128723116

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCAGAACAA_____CCAAUUC________	3'
		_________CCAGA_______GCCCACCA
		_________\|\|\|\|\|_______\|\|\|\|\|\|\|\|
		_________GGUCU_______CGGGUGGU
(miRNA)	3'	________A_____AAGACA_________	5'

ENSG00000167081 (PBX3)

hsa-miR-654-5p

0.999232486891601

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

207-225

0.116440943105924

Position on chromosome:

9:128728274-128728292

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAAAAGGAAA___________A________	3'
		__________GCGU_UUUUGU_GCCCACCA
		__________.\|.\|_\|\|.\|\|._\|\|\|\|\|\|\|\|
		__________UGUA_AAGACG_CGGGUGGU
(miRNA)	3'	_________G____C______C________	5'

UTR3

7mer

951-962

0.0200000397897471

Position on chromosome:

9:128729018-128729029

Conserved species:

panTro2,rheMac2,rn4,mm9

Binding area:

(Transcript)	5'	UAGCAAAAGAGUAUUUA_____________________	3'
		_________________UACAU_________CCCACCA
		_________________.\|\|\|\|_________\|\|\|\|\|\|\|
		_________________GUGUA_________GGGUGGU
(miRNA)	3'	________________C_____CAAGACGCC_______	5'

UTR3

8mer

988-996

0.0219353900807023

Position on chromosome:

9:128723108-128723116

Conserved species:

Not Conserved

Binding area:

(Transcript)	5'	GCAGAACAACCAGACCAAUU__________	3'
		____________________C_GCCCACCA
		____________________\|_\|\|\|\|\|\|\|\|
		____________________G_CGGGUGGU
(miRNA)	3'	___________________C_C________	5'

ENSG00000167081 (PBX3)

hsa-miR-98-5p

0.996770442936343

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

108-128

0.0123456201785486

Position on chromosome:

9:128728175-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGG__GU________CGGA______U	3'
		_______AA__GUGC_ACU____UACCUC_
		_______\|\|__.\|.\|_\|\|\|____\|\|\|\|\|\|_
		_______UU__UAUG_UGA____AUGGAG_
(miRNA)	3'	_________GU____U___AUG_______U	5'

UTR3

6mer

471-490

0.00538253311221681

Position on chromosome:

9:128728538-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAAAGU________C___AA________	3'
		_________ACAAUAUA_ACU____ACCUCA
		_________\|\|\|\|\|\|.\|_\|\|\|____\|\|\|\|\|\|
		_________UGUUAUGU_UGA____UGGAGU
(miRNA)	3'	________U____________AUGA______	5'

UTR3

6mer

499-521

0.00292786812098474

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGUUAA_____A_____AA____C______	3'
		______AGCAG_UGCAA___AUU_ACCUCA
		______\|.\|\|._\|.\|\|\|___\|.\|_\|\|\|\|\|\|
		______UUGUU_AUGUU___UGA_UGGAGU
(miRNA)	3'	_________________GAA__________	5'

UTR3

7mer

961-987

0.0320354271308083

Position on chromosome:

9:128729028-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	AC____CAAAAC_______U_________	3'
		__CAAU______ACAGCUU_AUUACCUCA
		__\|\|\|\|______\|\|\|.\|\|\|_\|.\|\|\|\|\|\|\|
		__GUUA______UGUUGAA_UGAUGGAGU
(miRNA)	3'	_U___________________________	5'

UTR3

8mer

1034-1054

0.0517007183220962

Position on chromosome:

9:128729101-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GUAGCUU_G_____UC____________U	3'
		_______A_AGUGC__ACUUACUACCUC_
		_______\|_\|.\|.\|__\|\|\|\|\|\|\|\|\|\|\|\|_
		_______U_UUAUG__UGAAUGAUGGAG_
(miRNA)	3'	______U_G_____U_____________U	5'

ENSG00000167081 (PBX3)

hsa-let-7b-5p

0.996648600755284

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

112-128

0.0108921356791424

Position on chromosome:

9:128728179-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGGAAGU_UG___U___A__________U	3'
		___________G__CAC_CGG_____UACCUC_
		___________.__\|\|\|_\|.._____\|\|\|\|\|\|_
		___________U__GUG_GUU_____AUGGAG_
(miRNA)	3'	____________UG___U___GGAUG______U	5'

UTR3

6mer

467-490

0.00545535905969396

Position on chromosome:

9:128728534-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAA__G____AUAU__A___A_______	3'
		_____AA_UACA____AC_CUA__ACCUCA
		_____\|\|_.\|\|\|____\|\|_\|\|\|__\|\|\|\|\|\|
		_____UU_GUGU____UG_GAU__UGGAGU
(miRNA)	3'	_______G____GU________GA______	5'

UTR3

6mer

500-521

0.00303608807938193

Position on chromosome:

9:128728567-128728588

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGUUAAA___G_UG_AAAA___C______	3'
		_______GCA_A__C____AUU_ACCUCA
		_______.\|\|_\|__\|____\|.\|_\|\|\|\|\|\|
		_______UGU_U__G____UGA_UGGAGU
(miRNA)	3'	______G___G_UG_A_____________	5'

UTR3

7mer

962-987

0.0351384823945009

Position on chromosome:

9:128729029-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACC_____AAA______U___________	3'
		___AAUCA___CACAGC_UUAUUACCUCA
		___\|\|.\|\|___\|\|\|\|.\|_.\|\|.\|\|\|\|\|\|\|
		___UUGGU___GUGUUG_GAUGAUGGAGU
(miRNA)	3'	_____________________________	5'

UTR3

8mer

1037-1054

0.0492628390509453

Position on chromosome:

9:128729104-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GUAGCUUAGA_UG_U________________U	3'
		__________G__C_CAC___UUACUACCUC_
		__________.__\|_\|\|\|___.\|\|\|\|\|\|\|\|\|_
		__________U__G_GUG___GAUGAUGGAG_
(miRNA)	3'	___________UG_U___UUG__________U	5'

ENSG00000167081 (PBX3)

hsa-let-7c-5p

0.996249010817734

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

112-128

0.0120512342891925

Position on chromosome:

9:128728179-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGGAAGU_____C__GGA______U	3'
		___________GUGCA_UC___UACCUC_
		___________.\|.\|\|_.\|___\|\|\|\|\|\|_
		___________UAUGU_GG___AUGGAG_
(miRNA)	3'	__________G_____U__AUG______U	5'

UTR3

6mer

465-490

0.0054096402288563

Position on chromosome:

9:128728532-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUA__AA_______AUAC___AA______	3'
		___AA__GUACAAU____ACU__ACCUCA
		___\|\|__.\|\|\|\|\|.____\|\|\|__\|\|\|\|\|\|
		___UU__UAUGUUG____UGA__UGGAGU
(miRNA)	3'	_____GG_______GA_____________	5'

UTR3

6mer

499-521

0.00297617681119971

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGUUAA___AG______AA____C______	3'
		______AGC__AUGCAA___AUU_ACCUCA
		______\|.\|__\|\|.\|\|\|___\|.\|_\|\|\|\|\|\|
		______UUG__UAUGUU___UGA_UGGAGU
(miRNA)	3'	_________G_______GGA__________	5'

UTR3

7mer

962-987

0.0329103720815327

Position on chromosome:

9:128729029-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACC_____AAAC_____U___________	3'
		___AAUCA____ACAGC_UUAUUACCUCA
		___\|\|.\|\|____\|\|\|.\|_.\|\|.\|\|\|\|\|\|\|
		___UUGGU____UGUUG_GAUGAUGGAGU
(miRNA)	3'	________A____________________	5'

UTR3

8mer

1029-1054

0.0485899173184495

Position on chromosome:

9:128729096-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GU____UAGA____UC____________U	3'
		__AGCU____GUGC__ACUUACUACCUC_
		__\|.\|.____.\|.\|__\|\|.\|\|\|\|\|\|\|\|\|_
		__UUGG____UAUG__UGGAUGAUGGAG_
(miRNA)	3'	______________U_____________U	5'

ENSG00000167081 (PBX3)

hsa-let-7a-5p

0.996115154960663

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

108-128

0.0111191847722645

Position on chromosome:

9:128728175-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGG__G______C__GGA______U	3'
		_______AA_UGUGCA_UC___UACCUC_
		_______\|\|_\|.\|.\|\|_.\|___\|\|\|\|\|\|_
		_______UU_AUAUGU_GG___AUGGAG_
(miRNA)	3'	_________G______U__AUG______U	5'

UTR3

6mer

469-490

0.0054005777043383

Position on chromosome:

9:128728536-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAAA_______AUAC___AA______	3'
		_______GUACAAU____ACU__ACCUCA
		_______.\|\|\|\|\|.____\|\|\|__\|\|\|\|\|\|
		_______UAUGUUG____UGA__UGGAGU
(miRNA)	3'	______A_______GA_____________	5'

UTR3

6mer

499-521

0.00301587724045049

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGUUAA___AG______AA____C______	3'
		______AGC__AUGCAA___AUU_ACCUCA
		______\|.\|__\|\|.\|\|\|___\|.\|_\|\|\|\|\|\|
		______UUG__UAUGUU___UGA_UGGAGU
(miRNA)	3'	_________A_______GGA__________	5'

UTR3

7mer

971-987

0.0317078388899661

Position on chromosome:

9:128729038-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACCAAUCAAAAC_____U___________	3'
		____________ACAGC_UUAUUACCUCA
		____________\|\|\|.\|_.\|\|.\|\|\|\|\|\|\|
		____________UGUUG_GAUGAUGGAGU
(miRNA)	3'	___________A_________________	5'

UTR3

8mer

1029-1054

0.0501185897692395

Position on chromosome:

9:128729096-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GU____UAGA____UC____________U	3'
		__AGCU____GUGC__ACUUACUACCUC_
		__\|.\|\|____.\|.\|__\|\|.\|\|\|\|\|\|\|\|\|_
		__UUGA____UAUG__UGGAUGAUGGAG_
(miRNA)	3'	______________U_____________U	5'

ENSG00000167081 (PBX3)

hsa-miR-4491

0.99608450065794

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

10-33

0.101233105697464

Position on chromosome:

9:128725348-128725371

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,danRer6

Binding area:

(Transcript)	5'	UGGA__AAAU____UGUA__________A	3'
		____GG____UCAC____CAGUCCACAU_
		____\|\|____\|\|\|\|____\|\|\|\|\|\|\|\|\|\|_
		____CC____AGUG____GUCAGGUGUA_
(miRNA)	3'	___A__________UG____________A	5'

ENSG00000167081 (PBX3)

hsa-miR-5691

0.995779613366295

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

9mer

165-190

0.100002569565853

Position on chromosome:

9:128728232-128728257

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	ACA_GC____AUA___GCAU_________	3'
		___U__CUUG___AGU____UCAGAGCAA
		___\|__\|\|.\|___\|\|.____\|\|\|\|\|\|\|\|\|
		___A__GAGC___UCG____AGUCUCGUU
(miRNA)	3'	__G_AA____C__________________	5'

ENSG00000167081 (PBX3)

hsa-let-7i-5p

0.995768637831811

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

114-128

0.0123083440267154

Position on chromosome:

9:128728181-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGGAAGUGU____U___GGA______U	3'
		_____________GCAC___C___UACCUC_
		_____________\|\|\|\|___\|___\|\|\|\|\|\|_
		_____________CGUG___G___AUGGAG_
(miRNA)	3'	____________U____UUU_AUG______U	5'

UTR3

6mer

468-490

0.00520782616918272

Position on chromosome:

9:128728535-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAA_______UAU______AA______	3'
		______AGUACAA___AC_ACU__ACCUCA
		______\|\|.\|\|\|\|___\|\|_\|\|\|__\|\|\|\|\|\|
		______UCGUGUU___UG_UGA__UGGAGU
(miRNA)	3'	_____G____________A___________	5'

UTR3

6mer

499-521

0.00337714051741972

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,monDom5

Binding area:

(Transcript)	5'	CGUUAA_____AUG____AAUUC______	3'
		______AGCAG___CAAA_____ACCUCA
		______\|.\|\|\|___\|\|\|\|_____\|\|\|\|\|\|
		______UUGUC___GUUU_____UGGAGU
(miRNA)	3'	___________GU_____GAUGA______	5'

UTR3

7mer

971-987

0.0329103720815327

Position on chromosome:

9:128729038-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACCAAUCAAAAC_____U_______________	3'
		____________ACAGC_____UUAUUACCUCA
		____________\|\|\|\|\|_____.\|\|.\|\|\|\|\|\|\|
		____________UGUCG_____GAUGAUGGAGU
(miRNA)	3'	___________U_____UGUUU___________	5'

UTR3

8mer

1028-1054

0.0461562577339547

Position on chromosome:

9:128729095-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	G____U____GUGCUCAC__________U	3'
		_UAGC_UAGA________UUACUACCUC_
		_.\|\|\|_.\|.\|________.\|\|\|\|\|\|\|\|\|_
		_GUCG_GUUU________GAUGAUGGAG_
(miRNA)	3'	U____U______________________U	5'

ENSG00000167081 (PBX3)

hsa-let-7g-5p

0.995638166340535

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

108-128

0.0109887385465602

Position on chromosome:

9:128728175-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGG__G______CU_GGA______U	3'
		_______AA_UGUGCA__C___UACCUC_
		_______\|\|_\|\|\|.\|\|__\|___\|\|\|\|\|\|_
		_______UU_ACAUGU__G___AUGGAG_
(miRNA)	3'	_________G______UU_AUG______U	5'

UTR3

6mer

469-490

0.00532903602023855

Position on chromosome:

9:128728536-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAAA______UAU______AA______	3'
		_______GUACAA___AC_ACU__ACCUCA
		_______\|\|\|\|\|\|___\|\|_\|\|\|__\|\|\|\|\|\|
		_______CAUGUU___UG_UGA__UGGAGU
(miRNA)	3'	______A___________A___________	5'

UTR3

6mer

499-521

0.00354334221822115

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,monDom5

Binding area:

(Transcript)	5'	CGUUAA___A_A______AAUUC______	3'
		______AGC_G_UGCAAA_____ACCUCA
		______\|.\|_\|_\|.\|\|\|\|_____\|\|\|\|\|\|
		______UUG_C_AUGUUU_____UGGAGU
(miRNA)	3'	_________A________GAUGA______	5'

UTR3

7mer

971-987

0.0305066973306948

Position on chromosome:

9:128729038-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACCAAUCAAAAC____CU___________	3'
		____________ACAG__UUAUUACCUCA
		____________\|\|\|.__.\|\|.\|\|\|\|\|\|\|
		____________UGUU__GAUGAUGGAGU
(miRNA)	3'	___________A____U____________	5'

UTR3

8mer

1029-1054

0.0490936424657199

Position on chromosome:

9:128729096-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GU____UAGA____UC___U________U	3'
		__AGCU____GUGC__ACU_ACUACCUC_
		__\|.\|\|____\|\|.\|__\|\|\|_\|\|\|\|\|\|\|\|_
		__UUGA____CAUG__UGA_UGAUGGAG_
(miRNA)	3'	______________UU____________U	5'

ENSG00000167081 (PBX3)

hsa-miR-7112-3p

0.994424314223847

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

494-508

0.00456072083260722

Position on chromosome:

9:128728561-128728575

Conserved species:

panTro2,rheMac2,canFam2,echTel1

Binding area:

(Transcript)	5'	ACUAAACCUCAACC_______CA_________	3'
		______________GUUAAAG_____GAUGCA
		______________\|..\|\|\|\|_____\|\|\|\|\|\|
		______________CGGUUUC_____CUACGU
(miRNA)	3'	_____________C_______CGACA______	5'

UTR3

9mer

1319-1337

0.0908679854210331

Position on chromosome:

9:128729386-128729404

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	AAAAAAAAGC__C_A_________________	3'
		__________AG_G_CUAA___UUGUGAUGCA
		__________\|\|_\|_\|.\|\|___.\|\|\|\|\|\|\|\|\|
		__________UC_C_GGUU___GACACUACGU
(miRNA)	3'	_________A____C____UCC__________	5'

ENSG00000167081 (PBX3)

hsa-let-7f-5p

0.994189643765867

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

108-128

0.0111191847722645

Position on chromosome:

9:128728175-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGG__G______C__GGA______U	3'
		_______AA_UGUGCA_UC___UACCUC_
		_______\|\|_\|.\|.\|\|_\|\|___\|\|\|\|\|\|_
		_______UU_AUAUGU_AG___AUGGAG_
(miRNA)	3'	_________G______U__AUG______U	5'

UTR3

6mer

469-490

0.00537355085007271

Position on chromosome:

9:128728536-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAAA_______AUAC___AA______	3'
		_______GUACAAU____ACU__ACCUCA
		_______.\|\|\|\|\|\|____\|\|\|__\|\|\|\|\|\|
		_______UAUGUUA____UGA__UGGAGU
(miRNA)	3'	______A_______GA_____________	5'

UTR3

6mer

499-521

0.00307204902219006

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGUUAA___AG______AA____C______	3'
		______AGC__AUGCAA___AUU_ACCUCA
		______\|.\|__\|\|.\|\|\|___\|.\|_\|\|\|\|\|\|
		______UUG__UAUGUU___UGA_UGGAGU
(miRNA)	3'	_________A_______AGA__________	5'

UTR3

7mer

971-987

0.0308786575963201

Position on chromosome:

9:128729038-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACCAAUCAAAAC____C____________	3'
		____________ACAG_UUUAUUACCUCA
		____________\|\|\|._\|.\|\|.\|\|\|\|\|\|\|
		____________UGUU_AGAUGAUGGAGU
(miRNA)	3'	___________A_________________	5'

UTR3

8mer

1029-1054

0.0443076017127244

Position on chromosome:

9:128729096-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GU____UAGA____UCAC__________U	3'
		__AGCU____GUGC____UUACUACCUC_
		__\|.\|\|____.\|.\|____.\|\|\|\|\|\|\|\|\|_
		__UUGA____UAUG____GAUGAUGGAG_
(miRNA)	3'	______________UUA___________U	5'

ENSG00000167081 (PBX3)

hsa-miR-4500

0.993859855937266

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

105-128

0.0132423722833098

Position on chromosome:

9:128728172-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCC___A__UG___ACUCGGA______U	3'
		____AGG_AG__UGC_______UACCUC_
		____\|.\|_\|.__\|.\|_______\|\|\|\|\|\|_
		____UUC_UU__AUG_______AUGGAG_
(miRNA)	3'	__________UG________________U	5'

UTR3

6mer

480-490

0.00588872862032821

Position on chromosome:

9:128728547-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAAAGUACAAUAUAC____A_______	3'
		__________________ACUA__ACCUCA
		__________________\|\|\|\|__\|\|\|\|\|\|
		__________________UGAU__UGGAGU
(miRNA)	3'	_________________U____GA______	5'

UTR3

6mer

510-521

0.00348650579048156

Position on chromosome:

9:128728577-128728588

Conserved species:

panTro2,rheMac2,bosTau4,canFam2

Binding area:

(Transcript)	5'	CGUUAAAGCAGAUGCAA______________	3'
		_________________AAAUU_C_ACCUCA
		_________________\|\|\|.\|_\|_\|\|\|\|\|\|
		_________________UUUGA_G_UGGAGU
(miRNA)	3'	________________C_____U_A______	5'

UTR3

7mer

973-987

0.0289699755955779

Position on chromosome:

9:128729040-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACCAAUCAAAACAC__CU____________	3'
		______________AG___UUAUUACCUCA
		______________\|\|___.\|\|.\|\|\|\|\|\|\|
		______________UC___GAUGAUGGAGU
(miRNA)	3'	_____________U__UUU___________	5'

UTR3

8mer

1034-1054

0.0422557498665

Position on chromosome:

9:128729101-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GUAGCUU____UGCUC___U________U	3'
		_______AGAG_____ACU_ACUACCUC_
		_______\|\|\|._____\|\|\|_\|\|\|\|\|\|\|\|_
		_______UCUU_____UGA_UGAUGGAG_
(miRNA)	3'	______U_____________________U	5'

ENSG00000167081 (PBX3)

hsa-miR-20a-5p

0.990904631166466

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

124-151

0.00567844402810721

Position on chromosome:

9:128728191-128728218

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	_____CUA____AUCUC___CCA______U	3'
		_ACCU___ACUA_____UGG___CACUUU_
		_\|\|\|\|___\|\|\|\|_____\|..___\|\|\|\|\|\|_
		_UGGA___UGAU_____AUU___GUGAAA_
(miRNA)	3'	A____CG_____________C________U	5'

UTR3

9mer

339-348

0.0816943989000545

Position on chromosome:

9:128728406-128728415

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CACAAUGUUAAAAAAAAUA__________	3'
		___________________AAGCACUUUA
		___________________\|\|\|\|\|\|\|\|\|\|
		___________________UUCGUGAAAU
(miRNA)	3'	__________________A__________	5'

ENSG00000167081 (PBX3)

hsa-miR-4647

0.990589253902338

Gene details
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miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

54-80

0.0512783181771422

Position on chromosome:

9:128728121-128728147

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,fr2

Binding area:

(Transcript)	5'	GG__GG___G______ACAACU________	3'
		__CU__CAG_AC_GCA______CCAUCUUC
		__\|.__\|\|\|_\|\|_\|\|\|______\|\|\|\|\|\|\|\|
		__GG__GUC_UG_CGU______GGUAGAAG
(miRNA)	3'	_A__A____G__U_________________	5'

UTR3

6mer

631-648

0.00542154661261205

Position on chromosome:

9:128728698-128728715

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	GUUAAUGAUGG__GU__UUA__A_________	3'
		___________UU__GU___AG____AUCUUC
		___________.\|__\|.___\|\|____\|\|\|\|\|\|
		___________GA__CG___UC____UAGAAG
(miRNA)	3'	__________G__GU__UG___GUGG______	5'

UTR3

6mer

1084-1104

0.0110569621822349

Position on chromosome:

9:128729151-128729171

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	UUGUCUC_______U_UUU__UG______G	3'
		_______UUUCUUA_C____U__CAUCUU_
		_______\|\|.\|\|.\|_\|____.__\|\|\|\|\|\|_
		_______AAGGAGU_G____G__GUAGAA_
(miRNA)	3'	______________C_UGUC_UG______G	5'

UTR3

6mer

1275-1285

0.019053699150033

Position on chromosome:

9:128729342-128729352

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	GAGAAACAUUUUGAAUG_____________________A	3'
		_________________UUCU__________UCAUCUU_
		_________________\|.\|\|__________.\|\|\|\|\|\|_
		_________________AGGA__________GGUAGAA_
(miRNA)	3'	________________A____GUCGUGUCGU_______G	5'

ENSG00000167081 (PBX3)

hsa-miR-106b-5p

0.990088738090387

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

135-151

0.00242393049053869

Position on chromosome:

9:128728202-128728218

Conserved species:

panTro2,rheMac2

Binding area:

(Transcript)	5'	ACCUCUAACUA__________GC_________U	3'
		___________AUCU___CUG__CA_CACUUU_
		___________\|\|\|\|___\|\|\|__\|\|_\|\|\|\|\|\|_
		___________UAGA___GAC__GU_GUGAAA_
(miRNA)	3'	_______________CGU___A___C______U	5'

UTR3

9mer

322-348

0.0835314011072355

Position on chromosome:

9:128728389-128728415

Conserved species:

panTro2,rheMac2,rn4,mm9,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CA__A____AAAAAAAAUAA_________	3'
		__CA_UGUU___________AGCACUUUA
		__\|\|_\|\|\|.___________\|\|\|\|\|\|\|\|\|
		__GU_ACAG___________UCGUGAAAU
(miRNA)	3'	_C__G________________________	5'

ENSG00000167081 (PBX3)

hsa-miR-4311

0.987896150396325

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

553-571

0.004742594358658

Position on chromosome:

9:128728620-128728638

Conserved species:

panTro2,canFam2,loxAfr3,echTel1

Binding area:

(Transcript)	5'	AUUUCCAUUA_UG______A__G______	3'
		__________C__ACUUGG_UU_UCUUUC
		__________\|__\|\|\|..\|_.\|_\|\|\|\|\|\|
		__________G__UGAGUC_GA_AGAAAG
(miRNA)	3'	___________UG_________G______	5'

UTR3

8mer

1066-1087

0.0441380293878129

Position on chromosome:

9:128729133-128729154

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	CAAUACU______G____UUG________	3'
		_______CACGCU_UAGU___UCUCUUUC
		_______\|\|\|.\|\|_.\|\|.___\|\|\|\|\|\|\|\|
		_______GUGUGA_GUCG___AGAGAAAG
(miRNA)	3'	_____________________________	5'

UTR3

6mer

1109-1118

0.00581197941096733

Position on chromosome:

9:128729176-128729185

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UCUUUUUGCAUCUUGUAA___A______G	3'
		__________________UUA_CUCUUU_
		__________________\|.\|_\|\|\|\|.\|_
		__________________AGU_GAGAGA_
(miRNA)	3'	_________________G___C______A	5'

UTR3

8mer

1390-1406

0.0279601250109726

Position on chromosome:

9:128729457-128729473

Conserved species:

panTro2,bosTau4,canFam2,dasNov2,loxAfr3

Binding area:

(Transcript)	5'	AAUGGGGCCCC_U___CUUU________U	3'
		___________C_CUC____CUCUCUUU_
		___________\|_\|\|\|____\|\|\|\|\|\|\|\|_
		___________G_GAG____GAGAGAAA_
(miRNA)	3'	__________U_U___UC__________G	5'

ENSG00000167081 (PBX3)

hsa-miR-548v

0.986871253537716

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

193-219

0.00925371665348738

Position on chromosome:

9:128728260-128728286

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	A__A_G_____GAAAGCGUUU_______C	3'
		_GG_G_AAAAG__________UUGUAGC_
		_\|\|_\|_\|\|\|\|\|__________.\|\|\|\|\|\|_
		_CC_C_UUUUC__________GACAUCG_
(miRNA)	3'	A__A_G_____AUU______________A	5'

UTR3

8mer

373-391

0.021531815346071

Position on chromosome:

9:128728440-128728458

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	GAUUUAACAU__U__AC_____C_________	3'
		__________UG_UG____AGU__CUGUAGCU
		__________\|\|_\|\|____\|\|\|__\|\|\|\|\|\|\|\|
		__________AC_AC____UCA__GACAUCGA
(miRNA)	3'	____________C__GUUU___UU________	5'

UTR3

6mer

919-937

0.0115782505517799

Position on chromosome:

9:128728986-128729004

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	CUCUCUGGA____U______UAU_G______A	3'
		_________GUGU____GUA___A_UGUAGC_
		_________\|\|\|.____\|\|\|___\|_\|\|\|\|\|\|_
		_________CACG____CAU___U_ACAUCG_
(miRNA)	3'	________C____UUUU_______G______A	5'

UTR3

8mer

1019-1032

0.0389435336580449

Position on chromosome:

9:128729086-128729099

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	CCAAUAGAAUUUCAA__U____U_________	3'
		_______________CA___GU__CUGUAGCU
		_______________\|\|___\|\|__\|\|\|\|\|\|\|\|
		_______________GU___CA__GACAUCGA
(miRNA)	3'	______________C__UUU__UU________	5'

ENSG00000167081 (PBX3)

hsa-let-7d-5p

0.984513156595466

Gene details
	loading...
miRNA details
	loading...

pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

108-129

0.0160106937672555

Position on chromosome:

9:128728175-128728196

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	GCCCAGG__G______C__GGA_______	3'
		_______AA_UGUGCA_UC___UACCUCU
		_______\|\|_\|.\|\|\|\|_.\|___\|\|\|\|\|\|\|
		_______UU_AUACGU_GG___AUGGAGA
(miRNA)	3'	_________G______U__AUG_______	5'

UTR3

9mer

1029-1055

0.0625577202232656

Position on chromosome:

9:128729096-128729122

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GU____UAGA____UC_____________	3'
		__AGCU____GUGC__ACUUACUACCUCU
		__\|.\|\|____.\|\|\|__\|\|.\|\|\|\|\|\|\|\|\|\|
		__UUGA____UACG__UGGAUGAUGGAGA
(miRNA)	3'	______________U______________	5'

ENSG00000167081 (PBX3)

hsa-miR-2052

0.983860833339444

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

296-319

0.00682678618646249

Position on chromosome:

9:128728363-128728386

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	AUAAU____UG_AU____ACUUA______	3'
		_____CAUU__U__UUAU_____AAAACA
		_____\|\|\|\|__\|__\|\|\|\|_____\|\|\|\|\|\|
		_____GUAA__A__AAUA_____UUUUGU
(miRNA)	3'	____U____UG_C_____G__________	5'

UTR3

9mer

952-971

0.0710564733584707

Position on chromosome:

9:128729019-128729038

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	AGUAUUUAU____CCCACCA_________	3'
		_________ACAU_______AUCAAAACA
		_________\|\|\|\|_______\|\|\|\|\|\|\|\|\|
		_________UGUA_______UAGUUUUGU
(miRNA)	3'	_____________AUGACAA_________	5'

ENSG00000167081 (PBX3)

hsa-miR-7154-5p

0.981970750208764

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

1430-1445

0.0326723008663341

Position on chromosome:

9:128729497-128729512

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	UGCGAUUCUGAAA_______G__________	3'
		_____________CU_GAUU_AG_UCAUGAA
		_____________\|\|_\|\|.._\|\|_\|\|\|\|\|\|\|
		_____________GA_CUGG_UC_AGUACUU
(miRNA)	3'	____________C__U____G__A_______	5'

UTR3

6mer

1540-1564

0.0124112094696414

Position on chromosome:

9:128729607-128729631

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	UGGU_____U__G_____UCAAA______	3'
		____AGUUA_AU_UAGUU_____CAUGAA
		____\|\|.\|\|_\|._.\|\|\|\|_____\|\|\|\|\|\|
		____UCGAU_UG_GUCAA_____GUACUU
(miRNA)	3'	___U_____C__G________________	5'

UTR3

7mer

1565-1584

0.0309582872654462

Position on chromosome:

9:128729632-128729651

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,tetNig2,fr2

Binding area:

(Transcript)	5'	AACAUGAA___A__UUU_G_U________U	3'
		________UAA_CU___U_C__UUCAUGA_
		________.\|\|_\|\|___._\|__\|\|\|\|\|\|\|_
		________GUU_GA___G_G__AAGUACU_
(miRNA)	3'	_______G___C__UCU_G_UC_______U	5'

ENSG00000167081 (PBX3)

hsa-miR-7-5p

0.980725180591808

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

627-649

0.00439377639774244

Position on chromosome:

9:128728694-128728716

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3

Binding area:

(Transcript)	5'	UAAUG_UG_UU__GU___AGAA______U	3'
		_____A__G__GU__UUA____UCUUCC_
		_____\|__.__.\|__.\|\|____\|\|\|\|\|\|_
		_____U__U__UA__GAU____AGAAGG_
(miRNA)	3'	____G_UG_UU__GU___C_________U	5'

UTR3

8mer

1525-1532

0.0705354335100463

Position on chromosome:

9:128729592-128729599

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	AUUACACCCUGGAUUGAAAA________U	3'
		____________________AGUCUUCC_
		____________________\|\|\|\|\|\|\|\|_
		____________________UCAGAAGG_
(miRNA)	3'	___________________A________U	5'

ENSG00000167081 (PBX3)

hsa-miR-320b

0.980128518052591

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

218-236

0.034320651404924

Position on chromosome:

9:128728285-128728303

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUUUUGUA____A____U__A_______A	3'
		_________GCCC_C_CA_CU_CAGCUUU_
		_________\|\|\|\|_\|_\|\|_\|._\|\|\|\|\|\|\|_
		_________CGGG_G_GU_GG_GUCGAAA_
(miRNA)	3'	________A____A_A__U__________A	5'

UTR3

7mer

956-978

0.040100348936327

Position on chromosome:

9:128729023-128729045

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UACAU___ACCAA____AACA_______A	3'
		_____CCC_____UCAA____CAGCUUU_
		_____\|\|\|_____\|\|\|\|____\|\|\|\|\|\|\|_
		_____GGG_____AGUU____GUCGAAA_
(miRNA)	3'	____C___AG_______GG_________A	5'

ENSG00000167081 (PBX3)

hsa-miR-320a

0.97999985730756

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

218-236

0.0342130256759867

Position on chromosome:

9:128728285-128728303

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUUUUGUA____A____U__A_______A	3'
		_________GCCC_C_CA_CU_CAGCUUU_
		_________\|\|\|\|_\|_\|\|_\|._\|\|\|\|\|\|\|_
		_________CGGG_G_GU_GG_GUCGAAA_
(miRNA)	3'	________G____A_A__U__________A	5'

UTR3

7mer

956-978

0.040100348936327

Position on chromosome:

9:128729023-128729045

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UACAU___ACCAA____AACA_______A	3'
		_____CCC_____UCAA____CAGCUUU_
		_____\|\|\|_____\|\|\|\|____\|\|\|\|\|\|\|_
		_____GGG_____AGUU____GUCGAAA_
(miRNA)	3'	____C___AG_______GG_________A	5'

ENSG00000167081 (PBX3)

hsa-miR-320c

0.979198771272026

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

218-236

0.0336887260996501

Position on chromosome:

9:128728285-128728303

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUUUUGUA____A____U__A_______A	3'
		_________GCCC_C_CA_CU_CAGCUUU_
		_________.\|\|\|_\|_\|\|_\|._\|\|\|\|\|\|\|_
		_________UGGG_G_GU_GG_GUCGAAA_
(miRNA)	3'	_____________A_A__U__________A	5'

UTR3

7mer

959-978

0.0399694127053666

Position on chromosome:

9:128729026-128729045

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UACAUCCC___AA_____AACA_______A	3'
		________ACC___UCAA____CAGCUUU_
		________\|\|\|___\|\|\|\|____\|\|\|\|\|\|\|_
		________UGG___AGUU____GUCGAAA_
(miRNA)	3'	___________GAG____GG_________A	5'

ENSG00000167081 (PBX3)

hsa-let-7e-5p

0.976901519981486

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

6mer

108-128

0.0111191847722645

Position on chromosome:

9:128728175-128728195

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GCCCAGG__G______C__GGA______U	3'
		_______AA_UGUGCA_UC___UACCUC_
		_______\|\|_\|.\|.\|\|_.\|___\|\|\|\|\|\|_
		_______UU_AUAUGU_GG___AUGGAG_
(miRNA)	3'	_________G______U__AGG______U	5'

UTR3

6mer

469-490

0.00545535905969396

Position on chromosome:

9:128728536-128728557

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUAAAAA_______AUACA__AA______	3'
		_______GUACAAU_____CU__ACCUCA
		_______.\|\|\|\|\|._____\|\|__\|\|\|\|\|\|
		_______UAUGUUG_____GA__UGGAGU
(miRNA)	3'	______A_______GAG____________	5'

UTR3

6mer

499-521

0.00289024201423386

Position on chromosome:

9:128728566-128728588

Conserved species:

panTro2,rheMac2,canFam2

Binding area:

(Transcript)	5'	CGUUAA___AG______AAA__________	3'
		______AGC__AUGCAA___UUC_ACCUCA
		______\|.\|__\|\|.\|\|\|___\|.\|_\|\|\|\|\|\|
		______UUG__UAUGUU___AGG_UGGAGU
(miRNA)	3'	_________A_______GG____A______	5'

UTR3

7mer

971-987

0.0310671570516751

Position on chromosome:

9:128729038-128729054

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	ACCAAUCAAAAC________A________	3'
		____________ACAGCUUU_UUACCUCA
		____________\|\|\|.\|.\|._.\|\|\|\|\|\|\|
		____________UGUUGGAG_GAUGGAGU
(miRNA)	3'	___________A_________________	5'

UTR3

7mer

1029-1054

0.0213757006000927

Position on chromosome:

9:128729096-128729121

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,echTel1,monDom5,galGal3,xenTro2,tetNig2,fr2

Binding area:

(Transcript)	5'	GU____UAGA_UG___ACUUA_______U	3'
		__AGCU____G__CUC_____CUACCUC_
		__\|.\|\|____.__\|\|\|_____\|\|\|\|\|\|\|_
		__UUGA____U__GAG_____GAUGGAG_
(miRNA)	3'	______UAUG_UG_______________U	5'

ENSG00000167081 (PBX3)

hsa-miR-320d

0.976719550513073

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

223-236

0.0330894375751024

Position on chromosome:

9:128728290-128728303

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	GUUUUUGUAGCCCA__A___A___________A	3'
		______________CC_UCU_____CAGCUUU_
		______________\|\|_\|\|\|_____\|\|\|\|\|\|\|_
		______________GG_AGA_____GUCGAAA_
(miRNA)	3'	_____________A______GUUGG_______A	5'

UTR3

7mer

960-978

0.0386869083593986

Position on chromosome:

9:128729027-128729045

Conserved species:

panTro2,rheMac2,rn4,mm9,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,monDom5,galGal3

Binding area:

(Transcript)	5'	UACAUCCCA__AA____AACA_______A	3'
		_________CC__UCAA____CAGCUUU_
		_________\|\|__\|\|\|\|____\|\|\|\|\|\|\|_
		_________GG__AGUU____GUCGAAA_
(miRNA)	3'	________A__AG____GG_________A	5'

ENSG00000167081 (PBX3)

hsa-miR-944

0.975734272379913

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

7mer

14-38

0.0209266290644206

Position on chromosome:

9:128725352-128725376

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3

Binding area:

(Transcript)	5'	GGAA____AC______GUCCAC_______	3'
		____AUUC__UGUACA______AUAAUUU
		____\|\|.\|__\|\|\|\|\|\|______\|\|\|\|\|\|\|
		____UAGG__ACAUGU______UAUUAAA
(miRNA)	3'	___G____CU___________________	5'

UTR3

7mer

381-406

0.0118314839088105

Position on chromosome:

9:128728448-128728473

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,loxAfr3,echTel1,galGal3

Binding area:

(Transcript)	5'	ACA__________GCUAUUU__UC_______	3'
		___GUCC__UGUA_______UA__AUAAUUU
		___.\|\|\|__\|\|\|\|_______.\|__\|\|\|\|\|\|\|
		___UAGG__ACAU_______GU__UAUUAAA
(miRNA)	3'	__G____CU______________________	5'

UTR3

6mer

664-686

0.00586953229801804

Position on chromosome:

9:128728731-128728753

Conserved species:

panTro2,rheMac2,bosTau4,canFam2,loxAfr3,echTel1,monDom5

Binding area:

(Transcript)	5'	UUGUG____GAUC___U____U________A	3'
		_____UUCA____UCU_AUGU___AUAAUU_
		_____.\|\|\|____\|\|._\|\|\|\|___\|\|\|\|\|\|_
		_____GAGU____AGG_UACA___UAUUAA_
(miRNA)	3'	________________C____UGU______A	5'

UTR3

8mer

1430-1453

0.0324547314827166

Position on chromosome:

9:128729497-128729520

Conserved species:

panTro2,rheMac2,mm9,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5,galGal3,xenTro2

Binding area:

(Transcript)	5'	UGAAA__G__UGAG______AA_________	3'
		_____CU_AU____UC_AUG___AAUAAUUU
		_____\|\|_\|\|____.\|_\|\|\|___\|\|\|\|\|\|\|\|
		_____GA_UA____GG_UAC___UUAUUAAA
(miRNA)	3'	_______G________C___AUG________	5'

ENSG00000167081 (PBX3)

hsa-miR-6805-3p

0.973920380853056

Gene details
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miRNA details
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pubMed links: miRNA | gene | both
UCSC graphic

Region

Binding Type

Transcript position

Score

Conservation

UTR3

8mer

176-190

0.0698737433481225

Position on chromosome:

9:128728243-128728257

Conserved species:

panTro2,rheMac2,oryCun2,bosTau4,canFam2,dasNov2,loxAfr3,monDom5

Binding area:

(Transcript)	5'	ACAUGCCUUGAUAA___CAUU__________	3'
		______________GUG______CAGAGCAA
		______________\|.\|______\|\|\|\|\|\|\|\|
		______________CGC______GUCUCGUU
(miRNA)	3'	_____________C___CCCCUC________	5'