LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-940


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Gene
miRNA
Score
DIANA Links
CTA-796E4.5
hsa-miR-940
0.992
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
450-456
0.020
1
8mer
749-759
0.013
3
7mer
20183-20205
0.009
2
8mer
29319-29335
0.008
1
8mer
2551-2571
0.005
1
7mer
17752-17767
0.004
0
7mer
10235-10240
0.004
1
8mer
8789-8800
0.004
1
7mer
18164-18181
0.004
0
7mer
6592-6610
0.002
0
6mer
29676-29688
0.002
1
6mer
25723-25741
0.002
3
6mer
26476-26495
0.002
2
6mer
19070-19088
0.002
1
6mer
1407-1433
0.002
1
6mer
17268-17276
0.002
1
6mer
15900-15908
0.002
1
6mer
9273-9280
0.001
2
6mer
15575-15592
0.001
0
6mer
8903-8918
0.001
1
6mer
3518-3530
0.001
0
6mer
8928-8954
0.000
0
XLOC_008461
hsa-miR-940
0.992
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017672
Biotype: transcript isomorph
Gene id: XLOC_008461
Gene Name: XLOC_008461
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5855-5865
0.026
1
7mer
5633-5650
0.010
1
7mer
1159-1179
0.008
1
7mer
5878-5896
0.008
1
6mer
746-764
0.005
1
8mer
2954-2976
0.005
1
8mer
4756-4775
0.005
0
7mer
2388-2403
0.003
0
6mer
1976-1987
0.003
1
8mer
3304-3314
0.003
0
6mer
2205-2210
0.002
0
6mer
2556-2563
0.002
0
7mer
2036-2051
0.002
0
7mer
2610-2626
0.002
0
7mer
3067-3083
0.001
Not Conserved
7mer
2634-2659
0.001
0
6mer
2698-2721
0.001
0
8mer
3195-3212
0.001
Not Conserved
6mer
2228-2242
0.001
0
7mer
3195-3216
0.000
Not Conserved
LINC01001
hsa-miR-940
0.991
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000526704
Biotype: lincRNA
Gene id: ENSG00000230724
Gene Name: LINC01001
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
110-120
0.023
0
8mer
842-857
0.009
Not Conserved
7mer
594-611
0.008
0
7mer
79-97
0.007
0
7mer
1998-2013
0.006
0
7mer
218-233
0.006
Not Conserved
7mer
302-319
0.005
Not Conserved
7mer
1646-1661
0.004
Not Conserved
7mer
808-825
0.004
0
6mer
2062-2077
0.003
0
7mer
695-710
0.002
Not Conserved
6mer
1839-1846
0.002
Not Conserved
7mer
998-1012
0.002
Not Conserved
6mer
1483-1490
0.001
Not Conserved
6mer
1097-1121
0.001
Not Conserved
7mer
1420-1434
0.001
Not Conserved
6mer
1325-1348
0.001
Not Conserved
7mer
1093-1111
0.001
Not Conserved
CTA-292E10.9
hsa-miR-940
0.991
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
19784-19806
0.008
0
8mer
7004-7024
0.008
1
8mer
8972-8992
0.007
2
7mer
24065-24086
0.006
1
7mer
21864-21885
0.004
1
7mer
17130-17151
0.004
0
7mer
6180-6201
0.004
1
7mer
2874-2895
0.004
1
6mer
799-806
0.004
1
7mer
23213-23234
0.003
1
7mer
22206-22212
0.003
0
7mer
9346-9367
0.003
0
7mer
3881-3888
0.003
2
7mer
1847-1863
0.003
8
7mer
24206-24220
0.002
1
7mer
17417-17437
0.002
2
6mer
8096-8101
0.002
3
6mer
7995-7999
0.002
3
6mer
1226-1237
0.002
1
6mer
2595-2607
0.002
4
6mer
7323-7347
0.002
2
6mer
18297-18301
0.002
0
6mer
21244-21260
0.002
0
6mer
8956-8963
0.001
2
6mer
1056-1074
0.001
1
6mer
12544-12558
0.001
0
6mer
18105-18129
0.001
1
6mer
4408-4429
0.001
0
6mer
5749-5769
0.001
1
6mer
15997-16019
0.001
1
XLOC_005623
hsa-miR-940
0.991
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012093
Biotype: transcript isomorph
Gene id: XLOC_005623
Gene Name: XLOC_005623
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
36-63
0.073
0
6mer
141-155
0.014
0
CTBP1-AS2
hsa-miR-940
0.991
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000578730
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2576-2589
0.047
1
7mer
2443-2463
0.020
1
8mer
433-440
0.011
0
7mer
1893-1908
0.007
1
7mer
1721-1741
0.003
0
XLOC_006242
hsa-miR-940
0.991
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00014209
Biotype: transcript isomorph
Gene id: XLOC_006242
Gene Name: XLOC_006242
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2112-2132
0.035
1
7mer
1781-1802
0.026
1
7mer
1541-1555
0.010
0
7mer
918-944
0.009
1
7mer
1920-1933
0.006
0
LINC00174
hsa-miR-940
0.991
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_026873.1
Biotype: antisense
Gene id: NR_026873.1 (gene)
Gene Name: LINC00174
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
270-284
0.007
1
7mer
3694-3700
0.006
Not Conserved
7mer
542-556
0.006
0
7mer
3126-3140
0.005
0
7mer
444-468
0.005
0
8mer
2429-2439
0.005
0
6mer
96-106
0.004
0
7mer
1293-1309
0.004
0
6mer
4366-4386
0.004
0
7mer
1884-1898
0.004
0
6mer
3888-3904
0.003
1
7mer
1703-1717
0.003
0
7mer
1093-1111
0.003
1
7mer
2493-2517
0.003
1
6mer
3320-3343
0.002
1
7mer
1161-1177
0.002
1
7mer
3095-3109
0.002
0
6mer
2273-2287
0.002
1
7mer
3682-3690
0.002
0
6mer
835-849
0.002
0
7mer
2526-2531
0.002
0
7mer
3014-3028
0.002
0
7mer
994-1020
0.002
0
6mer
2079-2105
0.002
1
6mer
2598-2612
0.001
1
6mer
2761-2775
0.001
0
6mer
2886-2911
0.001
0
6mer
2530-2555
0.001
1
6mer
1819-1844
0.001
Not Conserved
6mer
1575-1592
0.001
0
6mer
1671-1685
0.001
0
6mer
2262-2287
0.000
0
AC007064.24
hsa-miR-940
0.990
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000442403
Biotype: lincRNA
Gene id: ENSG00000237689
Gene Name: AC007064.24
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
123-143
0.066
0
6mer
64-88
0.020
0
CTD-2246P4.1
hsa-miR-940
0.990
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000585863
Biotype: lincRNA
Gene id: ENSG00000267065
Gene Name: CTD-2246P4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
349-372
0.033
Not Conserved
8mer
155-161
0.010
0
7mer
568-589
0.009
1
8mer
459-474
0.008
1
8mer
2173-2188
0.008
1
7mer
1418-1439
0.006
0
8mer
709-723
0.004
0
6mer
904-908
0.004
1
8mer
1561-1576
0.002
Not Conserved
6mer
1554-1571
0.002
0
6mer
1004-1022
0.001
0
RP11-384K6.6
hsa-miR-940
0.990
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000567913
Biotype: lincRNA
Gene id: ENSG00000260404
Gene Name: RP11-384K6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4346-4363
0.014
1
7mer
3747-3760
0.009
0
8mer
2448-2463
0.006
0
6mer
251-273
0.005
1
8mer
2796-2814
0.005
Not Conserved
7mer
4019-4045
0.005
0
8mer
3904-3918
0.004
Not Conserved
8mer
3110-3125
0.004
Not Conserved
6mer
1229-1240
0.004
1
7mer
4209-4234
0.003
Not Conserved
7mer
3328-3345
0.003
Not Conserved
7mer
3018-3027
0.003
Not Conserved
7mer
2190-2208
0.002
Not Conserved
6mer
1458-1463
0.002
0
7mer
2636-2650
0.002
Not Conserved
7mer
1289-1304
0.002
0
7mer
2277-2303
0.002
0
6mer
3504-3511
0.002
Not Conserved
7mer
1867-1882
0.001
0
6mer
1812-1819
0.001
Not Conserved
6mer
1954-1977
0.001
0
7mer
3140-3156
0.001
Not Conserved
8mer
2478-2495
0.001
Not Conserved
6mer
2544-2559
0.001
Not Conserved
7mer
2864-2882
0.001
Not Conserved
6mer
3142-3168
0.001
Not Conserved
6mer
2888-2900
0.001
Not Conserved
6mer
1481-1495
0.000
Not Conserved
6mer
2852-2878
0.000
Not Conserved
XLOC_013010
hsa-miR-940
0.989
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026952
Biotype: transcript isomorph
Gene id: XLOC_013010
Gene Name: XLOC_013010
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
87-92
0.027
0
7mer
647-668
0.027
0
6mer
505-527
0.014
0
6mer
15-31
0.012
0
6mer
310-337
0.003
Not Conserved
6mer
143-162
0.002
Not Conserved
XLOC_005409
hsa-miR-940
0.989
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011908
Biotype: transcript isomorph
Gene id: XLOC_005409
Gene Name: XLOC_005409
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
440-462
0.052
0
8mer
34-44
0.016
1
7mer
1230-1251
0.013
1
6mer
203-226
0.003
2
RP11-122K13.12
hsa-miR-940
0.989
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000424450
Biotype: antisense
Gene id: ENSG00000235245
Gene Name: RP11-122K13.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
236-260
0.071
1
6mer
406-432
0.014
1
CTBP1-AS2
hsa-miR-940
0.989
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505364
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
163-182
0.067
1
7mer
1064-1086
0.016
1
RP11-989E6.10
hsa-miR-940
0.989
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000568752
Biotype: lincRNA
Gene id: ENSG00000261200
Gene Name: RP11-989E6.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3858-3873
0.020
0
8mer
3436-3455
0.012
0
9mer
999-1008
0.010
0
9mer
761-769
0.008
0
6mer
393-413
0.007
0
9mer
3114-3134
0.007
0
8mer
1600-1610
0.004
0
7mer
1946-1953
0.003
0
6mer
1329-1345
0.003
0
7mer
1268-1288
0.003
0
8mer
1685-1710
0.003
0
6mer
1701-1727
0.002
0
9mer
1902-1922
0.002
0
7mer
1678-1699
0.000
Not Conserved
FAM224A
hsa-miR-940
0.988
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000419557
Biotype: lincRNA
Gene id: ENSG00000233522
Gene Name: FAM224A
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
514-528
0.033
0
7mer
217-239
0.023
0
6mer
1681-1688
0.016
0
6mer
556-574
0.011
0
RP11-216M21.7
hsa-miR-940
0.987
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000450520
Biotype: lincRNA
Gene id: ENSG00000233207
Gene Name: RP11-216M21.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
820-839
0.023
0
7mer
688-709
0.021
0
6mer
2736-2749
0.016
0
6mer
1072-1084
0.013
0
7mer
2060-2075
0.009
0
LINC00174
hsa-miR-940
0.987
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000421767
Biotype: lincRNA
Gene id: ENSG00000179406
Gene Name: LINC00174
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
270-284
0.007
1
7mer
542-556
0.005
0
7mer
444-468
0.005
0
7mer
3694-3700
0.005
Not Conserved
7mer
3126-3140
0.005
0
8mer
2429-2439
0.005
0
7mer
1293-1309
0.004
0
6mer
96-106
0.004
0
7mer
1884-1898
0.004
0
6mer
4366-4386
0.004
0
7mer
1093-1111
0.003
1
6mer
3888-3904
0.003
1
7mer
2493-2517
0.003
1
7mer
1703-1717
0.003
0
7mer
1161-1177
0.002
1
6mer
2273-2287
0.002
1
6mer
3320-3343
0.002
1
6mer
835-849
0.002
0
7mer
994-1020
0.002
0
7mer
2526-2531
0.002
0
7mer
3095-3109
0.002
0
6mer
2079-2105
0.002
1
7mer
3014-3028
0.001
0
6mer
2761-2775
0.001
0
6mer
2598-2612
0.001
1
7mer
3682-3690
0.001
0
6mer
2886-2911
0.001
0
6mer
2530-2555
0.001
1
6mer
1819-1844
0.001
Not Conserved
6mer
1575-1592
0.001
0
6mer
1671-1685
0.001
0
6mer
2262-2287
0.000
0
LOC101926935
hsa-miR-940
0.985
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_110001.1
Biotype: sense
Gene id: NR_110001.1 (gene)
Gene Name: LOC101926935
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-940
Sequence: aaggcagggcccccgcucccc
MirBase ID: MIMAT0004983
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4241-4261
0.029
0
9mer
3046-3067
0.027
0
6mer
5554-5564
0.008
0
7mer
2507-2513
0.006
0
7mer
901-924
0.004
Not Conserved
6mer
2541-2555
0.004
0
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