LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-92a-3p


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Gene
miRNA
Score
DIANA Links
RP11-67L2.2
hsa-miR-92a-3p
0.970
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000610128
Biotype: lincRNA
Gene id: ENSG00000273033
Gene Name: RP11-67L2.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
405-417
0.032
1
7mer
5437-5458
0.027
4
7mer
4787-4806
0.005
1
8mer+wobble
690-705
0.003
0
MIR6818
hsa-miR-92a-3p
0.970
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
10220-10245
0.008
2
7mer
26388-26402
0.007
3
7mer
21016-21038
0.004
1
8mer
39749-39764
0.004
0
6mer
9525-9547
0.004
10
8mer
45310-45325
0.003
1
8mer+wobble
503-518
0.003
0
6mer
30708-30732
0.002
3
6mer
9193-9210
0.002
1
8mer
3220-3235
0.002
0
6mer
2949-2973
0.002
3
8mer
6511-6526
0.002
0
6mer
1709-1733
0.002
2
6mer
11590-11607
0.002
1
6mer
41112-41126
0.002
2
8mer+wobble
19654-19670
0.002
1
7mer
36942-36967
0.002
0
6mer
16045-16070
0.002
1
6mer
5808-5819
0.002
0
6mer
14459-14470
0.001
0
8mer+wobble
21472-21487
0.001
0
6mer
11490-11516
0.001
0
6mer
23169-23192
0.001
2
8mer+wobble
40214-40229
0.001
0
6mer
8984-9005
0.001
0
6mer
27884-27907
0.001
1
6mer
1681-1695
0.001
4
8mer+wobble
2832-2847
0.001
1
6mer
9185-9197
0.001
0
6mer
36914-36934
0.000
1
PRKCQ-AS1
hsa-miR-92a-3p
0.970
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000607996
Biotype: lincRNA
Gene id: ENSG00000237943
Gene Name: PRKCQ-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
477-491
0.068
1
XLOC_009546
hsa-miR-92a-3p
0.970
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019752
Biotype: transcript isomorph
Gene id: XLOC_009546
Gene Name: XLOC_009546
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
137-156
0.068
1
PRKCQ-AS1
hsa-miR-92a-3p
0.969
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608453
Biotype: lincRNA
Gene id: ENSG00000237943
Gene Name: PRKCQ-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
176-190
0.067
1
HLA-F-AS1
hsa-miR-92a-3p
0.969
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000458236
Biotype: processed_transcript
Gene id: ENSG00000214922
Gene Name: HLA-F-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
945-962
0.063
1
6mer
2387-2412
0.004
0
XLOC_011277
hsa-miR-92a-3p
0.968
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023436
Biotype: transcript isomorph
Gene id: XLOC_011277
Gene Name: XLOC_011277
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
858-880
0.056
6
6mer
48-63
0.006
2
6mer
48-74
0.005
1
LINC01194
hsa-miR-92a-3p
0.967
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000505877
Biotype: lincRNA
Gene id: ENSG00000248131
Gene Name: LINC01194
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
195-209
0.043
1
7mer
318-329
0.019
1
6mer
160-182
0.005
0
LINC00977
hsa-miR-92a-3p
0.965
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: NR_033916.1
Biotype: lincRNA
Gene id: NR_033916.1 (gene)
Gene Name: LINC00977
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1097-1113
0.065
9
PRKCQ-AS1
hsa-miR-92a-3p
0.965
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000613985
Biotype: lincRNA
Gene id: ENSG00000237943
Gene Name: PRKCQ-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
838-852
0.065
1
AP001476.2
hsa-miR-92a-3p
0.964
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000451618
Biotype: lincRNA
Gene id: ENSG00000224413
Gene Name: AP001476.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
112-138
0.056
1
8mer+wobble
1897-1912
0.009
1
C9orf147
hsa-miR-92a-3p
0.964
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000463223
Biotype: antisense
Gene id: ENSG00000230185
Gene Name: C9orf147
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
28-49
0.061
1
6mer
374-391
0.004
0
RP11-490B18.6
hsa-miR-92a-3p
0.963
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000611726
Biotype: antisense
Gene id: ENSG00000276523
Gene Name: RP11-490B18.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
422-441
0.064
1
LINC00977
hsa-miR-92a-3p
0.963
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000509893
Biotype: lincRNA
Gene id: ENSG00000250400
Gene Name: LINC00977
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1097-1113
0.064
9
C9orf147
hsa-miR-92a-3p
0.962
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000460965
Biotype: antisense
Gene id: ENSG00000230185
Gene Name: C9orf147
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
155-176
0.064
1
RP3-323A16.1
hsa-miR-92a-3p
0.962
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
51044-51062
0.017
1
8mer
7513-7527
0.008
0
7mer
26977-26998
0.006
1
6mer
37596-37615
0.005
7
8mer+wobble
82-97
0.004
0
7mer
27371-27387
0.004
1
8mer
30890-30905
0.003
0
8mer+wobble
249-264
0.003
1
6mer
13669-13692
0.002
4
6mer
24975-24994
0.002
1
6mer
8000-8007
0.002
0
7mer
2201-2220
0.002
0
6mer
7229-7252
0.002
0
6mer
5526-5553
0.002
0
6mer
12839-12856
0.001
0
8mer+wobble
43496-43511
0.001
0
6mer
24038-24057
0.001
Not Conserved
RP6-91H8.5
hsa-miR-92a-3p
0.962
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000602396
Biotype: lincRNA
Gene id: ENSG00000269945
Gene Name: RP6-91H8.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
149-171
0.040
0
9mer
149-164
0.016
0
8mer+wobble
3281-3296
0.004
1
6mer
3294-3319
0.003
0
DKFZP434L187
hsa-miR-92a-3p
0.962
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000455163
Biotype: lincRNA
Gene id: ENSG00000225930
Gene Name: DKFZP434L187
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
325-338
0.063
1
RP11-445O3.3
hsa-miR-92a-3p
0.957
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000562127
Biotype: lincRNA
Gene id: ENSG00000260763
Gene Name: RP11-445O3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2515-2537
0.025
0
8mer+wobble
1105-1124
0.019
0
6mer
874-897
0.009
0
6mer
1924-1936
0.008
0
FAM66C
hsa-miR-92a-3p
0.956
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000456135
Biotype: antisense
Gene id: ENSG00000226711
Gene Name: FAM66C
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-92a-3p
Sequence: uauugcacuugucccggccugu
MirBase ID: MIMAT0000092
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
905-920
0.061
1
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