LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-708-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-849H4.4
hsa-miR-708-5p
0.969
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000502284
Biotype: antisense
Gene id: ENSG00000251143
Gene Name: RP11-849H4.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
924-949
0.014
5
6mer
644-655
0.008
7
8mer
2930-2954
0.007
6
6mer
205-222
0.006
6
6mer
157-180
0.006
9
7mer
383-397
0.005
1
6mer
671-697
0.003
5
7mer
659-672
0.003
5
6mer
3689-3713
0.003
1
6mer
1086-1110
0.003
8
6mer
1360-1381
0.002
7
7mer
1505-1525
0.002
8
6mer
2330-2356
0.002
1
6mer
2994-3007
0.001
5
6mer
1421-1443
0.001
5
6mer
1489-1510
0.001
1
RP5-1125M8.2
hsa-miR-708-5p
0.968
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000426321
Biotype: antisense
Gene id: ENSG00000229283
Gene Name: RP5-1125M8.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30-53
0.067
1
RP3-323A16.1
hsa-miR-708-5p
0.968
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36084-36107
0.006
1
7mer
34087-34102
0.005
0
6mer
53509-53531
0.004
1
6mer
13793-13816
0.003
6
7mer
39343-39367
0.003
1
7mer
5808-5829
0.003
0
7mer
6676-6698
0.002
0
7mer
1113-1132
0.002
0
6mer
18005-18031
0.002
1
6mer
14420-14442
0.002
2
6mer
52956-52981
0.002
1
6mer
802-825
0.002
1
7mer
45756-45774
0.002
1
6mer
44357-44381
0.002
2
6mer
7573-7598
0.002
0
6mer
30108-30129
0.002
1
6mer
1517-1535
0.001
1
6mer
44535-44555
0.001
3
6mer
18650-18673
0.001
1
6mer
31461-31476
0.001
Not Conserved
7mer
37262-37279
0.001
0
7mer
42957-42975
0.001
2
6mer
1239-1257
0.001
2
6mer
38222-38244
0.001
Not Conserved
6mer
49672-49689
0.001
0
6mer
42915-42935
0.001
2
6mer
39943-39966
0.001
1
6mer
48802-48814
0.001
0
6mer
16961-16985
0.001
1
6mer
18047-18068
0.001
0
6mer
10591-10613
0.001
1
6mer
45714-45734
0.001
1
6mer
37323-37344
0.001
1
6mer
53001-53020
0.001
Not Conserved
6mer
44379-44402
0.001
1
6mer
11961-11985
0.001
1
7mer
45768-45786
0.001
3
6mer
37379-37399
0.001
1
6mer
37393-37407
0.000
1
6mer
37408-37428
0.000
1
6mer
39943-39970
0.000
1
XLOC_009990
hsa-miR-708-5p
0.967
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020685
Biotype: transcript isomorph
Gene id: XLOC_009990
Gene Name: XLOC_009990
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
83-102
0.032
1
6mer
422-436
0.014
2
6mer
70-93
0.010
1
6mer
1159-1174
0.009
1
RP11-212I21.2
hsa-miR-708-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565307
Biotype: lincRNA
Gene id: ENSG00000260135
Gene Name: RP11-212I21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
397-417
0.066
12
RP3-340N1.2
hsa-miR-708-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000431027
Biotype: lincRNA
Gene id: ENSG00000227066
Gene Name: RP3-340N1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2449-2466
0.065
1
LINC01061
hsa-miR-708-5p
0.966
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_037596.1
Biotype: lincRNA
Gene id: NR_037596.1 (gene)
Gene Name: LINC01061
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
328-343
0.013
0
8mer
1156-1172
0.007
0
8mer
3269-3285
0.005
0
7mer
3971-3989
0.004
0
6mer
4613-4636
0.004
0
7mer
4422-4440
0.004
0
7mer
573-595
0.004
0
7mer
3487-3512
0.003
0
7mer
2702-2720
0.002
0
8mer
2605-2623
0.002
0
7mer
4327-4345
0.002
Not Conserved
7mer
799-813
0.002
Not Conserved
7mer
4167-4188
0.002
Not Conserved
6mer
747-763
0.002
0
7mer
3845-3858
0.001
0
7mer
1373-1395
0.001
0
7mer
2384-2403
0.001
0
6mer
1970-1988
0.001
0
7mer
1874-1889
0.001
0
7mer
1938-1959
0.001
0
6mer
1716-1734
0.001
0
7mer
2573-2594
0.001
0
7mer
1499-1521
0.001
Not Conserved
7mer
3237-3255
0.001
0
7mer
1684-1702
0.001
0
AC005324.6
hsa-miR-708-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000433873
Biotype: antisense
Gene id: ENSG00000233002
Gene Name: AC005324.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
88-107
0.056
1
6mer
226-250
0.009
1
RP11-15B17.1
hsa-miR-708-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000515026
Biotype: antisense
Gene id: ENSG00000245322
Gene Name: RP11-15B17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
657-667
0.032
1
7mer
431-454
0.020
4
7mer
143-165
0.008
4
6mer
169-196
0.005
1
RP11-556O9.2
hsa-miR-708-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582889
Biotype: antisense
Gene id: ENSG00000264513
Gene Name: RP11-556O9.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20-32
0.065
4
RP11-13K12.1
hsa-miR-708-5p
0.965
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000590398
Biotype: lincRNA
Gene id: ENSG00000267506
Gene Name: RP11-13K12.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2364-2379
0.017
0
8mer
276-293
0.014
0
6mer
103-120
0.003
0
6mer
2152-2176
0.003
1
6mer
2039-2060
0.003
1
6mer
1973-1997
0.002
Not Conserved
6mer
2089-2113
0.002
Not Conserved
6mer
1874-1891
0.002
0
6mer
436-460
0.002
Not Conserved
6mer
549-566
0.002
Not Conserved
6mer
1602-1626
0.001
0
6mer
602-619
0.001
Not Conserved
6mer
1761-1785
0.001
Not Conserved
6mer
754-778
0.001
0
6mer
701-725
0.001
Not Conserved
6mer
867-884
0.001
Not Conserved
6mer
1655-1679
0.001
0
6mer
1443-1467
0.001
Not Conserved
6mer
1072-1096
0.001
Not Conserved
6mer
920-937
0.001
Not Conserved
6mer
1496-1520
0.001
Not Conserved
6mer
1238-1255
0.001
Not Conserved
6mer
1287-1308
0.001
Not Conserved
6mer
1125-1149
0.001
Not Conserved
MIR6818
hsa-miR-708-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
48746-48772
0.006
9
7mer
49062-49077
0.006
1
7mer
41860-41880
0.004
11
7mer
31224-31249
0.004
1
6mer
37640-37651
0.004
10
7mer
12997-13019
0.003
0
8mer
46568-46582
0.003
1
7mer
12837-12856
0.003
0
6mer
5712-5730
0.003
5
6mer
42703-42727
0.002
7
6mer
29061-29088
0.002
7
6mer
40962-40984
0.002
5
6mer
41604-41622
0.002
6
6mer
18944-18967
0.002
2
6mer
6620-6634
0.002
2
6mer
40636-40662
0.002
9
7mer
5963-5978
0.002
2
6mer
8565-8584
0.002
1
6mer
1338-1356
0.002
1
6mer
21802-21819
0.001
0
6mer
28975-29001
0.001
7
7mer
47392-47416
0.001
1
6mer
34629-34655
0.001
0
6mer
29586-29612
0.001
2
6mer
40884-40910
0.001
2
6mer
41971-41994
0.001
3
6mer
42518-42539
0.001
1
CXADRP3
hsa-miR-708-5p
0.964
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000617265
Biotype: lincRNA
Gene id: ENSG00000265766
Gene Name: CXADRP3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
224-247
0.055
2
6mer
101-121
0.006
1
6mer
573-593
0.004
0
XLOC_009652
hsa-miR-708-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00021053
Biotype: transcript isomorph
Gene id: XLOC_009652
Gene Name: XLOC_009652
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
581-601
0.029
1
7mer
493-516
0.021
1
6mer
339-351
0.012
1
PCBP2-OT1
hsa-miR-708-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_109828.1
Biotype: sense
Gene id: NR_109828.1 (gene)
Gene Name: PCBP2-OT1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
155-181
0.062
8
SND1-IT1
hsa-miR-708-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000623342
Biotype: lincRNA
Gene id: ENSG00000279078
Gene Name: SND1-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
423-442
0.052
2
6mer
2391-2401
0.005
2
6mer
1348-1375
0.003
1
6mer
1023-1042
0.002
2
RP1-71H24.6
hsa-miR-708-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000614658
Biotype: lincRNA
Gene id: ENSG00000276343
Gene Name: RP1-71H24.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
330-348
0.034
1
6mer
365-383
0.019
1
6mer
146-172
0.008
0
RP11-796I2.1
hsa-miR-708-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000446340
Biotype: antisense
Gene id: ENSG00000227562
Gene Name: RP11-796I2.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
432-456
0.061
1
RP11-305O4.3
hsa-miR-708-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000608883
Biotype: antisense
Gene id: ENSG00000273455
Gene Name: RP11-305O4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
44-60
0.060
1
AC091962.3
hsa-miR-708-5p
0.953
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000509568
Biotype: lincRNA
Gene id: ENSG00000251183
Gene Name: AC091962.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
43-69
0.060
4
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept