LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-708-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-344N10.5
hsa-miR-708-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000608005
Biotype: lincRNA
Gene id: ENSG00000272630
Gene Name: RP11-344N10.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2248-2262
0.042
1
MIR4435-1HG
hsa-miR-708-5p
0.869
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000609220
Biotype: lincRNA
Gene id: ENSG00000172965
Gene Name: MIR4435-1HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
833-855
0.027
1
7mer
299-315
0.015
2
RP11-480I12.7
hsa-miR-708-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000456105
Biotype: lincRNA
Gene id: ENSG00000234996
Gene Name: RP11-480I12.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
174-199
0.025
0
7mer
2062-2087
0.008
1
6mer
109-129
0.003
0
6mer
1718-1745
0.003
0
6mer
346-360
0.002
1
RP11-93O14.2
hsa-miR-708-5p
0.868
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000569353
Biotype: sense_intronic
Gene id: ENSG00000261131
Gene Name: RP11-93O14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
35-53
0.042
2
RP11-818F20.5
hsa-miR-708-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000549807
Biotype: antisense
Gene id: ENSG00000257732
Gene Name: RP11-818F20.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
107-130
0.041
3
WISP1-OT1
hsa-miR-708-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000602893
Biotype: sense_intronic
Gene id: ENSG00000270132
Gene Name: WISP1-OT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
284-308
0.034
1
6mer
549-566
0.008
3
RP11-632K5.2
hsa-miR-708-5p
0.867
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000524441
Biotype: sense_intronic
Gene id: ENSG00000255440
Gene Name: RP11-632K5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
513-532
0.041
1
RP11-96K19.4
hsa-miR-708-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000562952
Biotype: sense_overlapping
Gene id: ENSG00000261654
Gene Name: RP11-96K19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
316-335
0.019
1
8mer
3749-3772
0.011
0
7mer
1505-1526
0.008
Not Conserved
6mer
1471-1486
0.003
1
FLJ32255
hsa-miR-708-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_104643.1
Biotype: lincRNA
Gene id: NR_104643.1 (gene)
Gene Name: FLJ32255
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
HeLa Cervix Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
815-833
0.015
1
6mer
346-368
0.014
1
6mer
52-62
0.009
0
6mer
1115-1139
0.003
0
KIAA0087
hsa-miR-708-5p
0.866
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_022006.1
Biotype: sense
Gene id: NR_022006.1 (gene)
Gene Name: KIAA0087
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4099-4122
0.021
3
8mer
4274-4293
0.018
0
6mer
1174-1186
0.002
0
RP11-566H8.1
hsa-miR-708-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000520391
Biotype: lincRNA
Gene id: ENSG00000253275
Gene Name: RP11-566H8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
21-43
0.041
2
CTA-941F9.10
hsa-miR-708-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623075
Biotype: sense_overlapping
Gene id: ENSG00000280383
Gene Name: CTA-941F9.10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
19068-19085
0.007
1
7mer
325-346
0.004
Not Conserved
6mer
696-711
0.003
Not Conserved
6mer
13396-13421
0.002
0
6mer
7247-7269
0.002
1
6mer
13191-13204
0.002
3
6mer
16503-16519
0.002
2
6mer
11759-11778
0.002
0
6mer
9641-9660
0.002
1
6mer
10889-10913
0.002
1
6mer
4117-4135
0.002
Not Conserved
6mer
5958-5982
0.002
0
6mer
9106-9126
0.002
2
6mer
13783-13806
0.001
1
6mer
18340-18363
0.001
1
6mer
15609-15633
0.001
2
6mer
17493-17508
0.001
0
6mer
10901-10920
0.001
1
6mer
11817-11836
0.001
1
6mer
18370-18394
0.001
0
LRRC37A5P
hsa-miR-708-5p
0.864
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_034087.1
Biotype: lincRNA
Gene id: NR_034087.1 (gene)
Gene Name: LRRC37A5P
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
725-749
0.041
1
RP11-234B24.2
hsa-miR-708-5p
0.863
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000527518
Biotype: lincRNA
Gene id: ENSG00000255474
Gene Name: RP11-234B24.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
107-126
0.027
1
6mer
446-460
0.007
2
6mer
94-117
0.007
1
ERVK3-1
hsa-miR-708-5p
0.863
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590505
Biotype: retained_intron
Gene id: ENSG00000142396
Gene Name: ERVK3-1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
280-304
0.022
0
7mer
3677-3694
0.016
1
7mer
1971-1993
0.003
Not Conserved
RP11-603J24.5
hsa-miR-708-5p
0.863
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000549438
Biotype: antisense
Gene id: ENSG00000258317
Gene Name: RP11-603J24.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
127-139
0.016
11
6mer
169-187
0.009
7
6mer
324-343
0.006
6
6mer
683-698
0.005
7
6mer
274-298
0.004
7
CTD-3193O13.12
hsa-miR-708-5p
0.863
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000539278
Biotype: antisense
Gene id: ENSG00000214248
Gene Name: CTD-3193O13.12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
396-421
0.009
8
6mer
327-351
0.006
6
6mer
738-764
0.005
7
6mer
4240-4261
0.005
3
7mer
1249-1267
0.003
9
7mer
1108-1133
0.003
5
8mer+wobble
3343-3363
0.003
0
6mer
2542-2564
0.002
7
7mer
1201-1226
0.002
6
7mer
1279-1292
0.002
1
XLOC_013703
hsa-miR-708-5p
0.862
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028028
Biotype: transcript isomorph
Gene id: XLOC_013703
Gene Name: XLOC_013703
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1415-1434
0.041
0
AC008088.4
hsa-miR-708-5p
0.860
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000563569
Biotype: lincRNA
Gene id: ENSG00000260907
Gene Name: AC008088.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
802-824
0.034
2
6mer
60-80
0.007
0
CH17-140K24.1
hsa-miR-708-5p
0.859
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000624102
Biotype: lincRNA
Gene id: ENSG00000279558
Gene Name: CH17-140K24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-708-5p
Sequence: aaggagcuuacaaucuagcuggg
MirBase ID: MIMAT0004926
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9-32
0.040
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept