LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-657

ENST00000567913

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Gene
miRNA
Score
DIANA Links
RP11-384K6.6
hsa-miR-657
0.799
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000567913
Biotype: lincRNA
Gene id: ENSG00000260404
Gene Name: RP11-384K6.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-657
Sequence: ggcagguucucacccucucuagg
MirBase ID: MIMAT0003335
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
4338-4362
0.007
1
8mer
3822-3836
0.006
Not Conserved
6mer
4023-4044
0.002
0
6mer
3896-3917
0.002
Not Conserved
6mer
1282-1303
0.002
0
6mer
2186-2207
0.001
0
6mer
1540-1559
0.001
0
6mer
4212-4233
0.001
Not Conserved
6mer
1860-1881
0.001
0
6mer
2443-2461
0.001
0
6mer
2791-2813
0.001
Not Conserved
6mer
3323-3344
0.001
Not Conserved
6mer
2280-2302
0.001
0
6mer
2630-2649
0.001
Not Conserved
6mer
3105-3123
0.001
Not Conserved
6mer
3005-3026
0.001
Not Conserved
6mer
2186-2211
0.001
0
6mer
2856-2881
0.000
Not Conserved
6mer
3134-3155
0.000
Not Conserved
6mer
2472-2493
0.000
Not Conserved
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