LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-4782-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
ANKRD62P1-PARP4P3
hsa-miR-4782-3p
0.877
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000457060
Biotype: lincRNA
Gene id: ENSG00000189295
Gene Name: ANKRD62P1-PARP4P3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
438-452
0.043
0
SMAD1-AS2
hsa-miR-4782-3p
0.876
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508936
Biotype: antisense
Gene id: ENSG00000250582
Gene Name: SMAD1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
896-919
0.043
1
TTTY12
hsa-miR-4782-3p
0.875
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000413466
Biotype: lincRNA
Gene id: ENSG00000237048
Gene Name: TTTY12
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
370-388
0.043
0
RP5-1195D24.1
hsa-miR-4782-3p
0.874
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000422574
Biotype: lincRNA
Gene id: ENSG00000236985
Gene Name: RP5-1195D24.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
471-486
0.042
0
XLOC_008283
hsa-miR-4782-3p
0.874
mTTBlnEmP

Gene Details
Chromosome: chrY
Transcript: TCONS_00017573
Biotype: transcript isomorph
Gene id: XLOC_008283
Gene Name: XLOC_008283
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
370-388
0.042
0
RP11-626H12.2
hsa-miR-4782-3p
0.871
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000528507
Biotype: lincRNA
Gene id: ENSG00000254605
Gene Name: RP11-626H12.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
337-360
0.042
1
XLOC_001924
hsa-miR-4782-3p
0.869
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005049
Biotype: transcript isomorph
Gene id: XLOC_001924
Gene Name: XLOC_001924
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
325-345
0.042
1
XLOC_000283
hsa-miR-4782-3p
0.867
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001018
Biotype: transcript isomorph
Gene id: XLOC_000283
Gene Name: XLOC_000283
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Breast Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
48-70
0.041
1
CTD-2330K9.3
hsa-miR-4782-3p
0.864
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000419183
Biotype: antisense
Gene id: ENSG00000228008
Gene Name: CTD-2330K9.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
312-320
0.041
3
LINC00698
hsa-miR-4782-3p
0.862
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000497573
Biotype: lincRNA
Gene id: ENSG00000244342
Gene Name: LINC00698
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
281-303
0.037
1
6mer
36-59
0.004
1
RP11-126H7.4
hsa-miR-4782-3p
0.861
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000372387
Biotype: antisense
Gene id: ENSG00000204049
Gene Name: RP11-126H7.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
437-456
0.040
1
AC092301.3
hsa-miR-4782-3p
0.860
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601618
Biotype: antisense
Gene id: ENSG00000269148
Gene Name: AC092301.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
682-700
0.027
Not Conserved
7mer
688-706
0.014
0
XLOC_006111
hsa-miR-4782-3p
0.857
mTTBlnEmP

Gene Details
Chromosome: chr7
Transcript: TCONS_00013454
Biotype: transcript isomorph
Gene id: XLOC_006111
Gene Name: XLOC_006111
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
242-263
0.014
1
6mer
62-79
0.012
0
6mer
530-549
0.011
1
6mer
602-625
0.003
0
LINC01108
hsa-miR-4782-3p
0.856
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000427276
Biotype: lincRNA
Gene id: ENSG00000226673
Gene Name: LINC01108
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1439-1458
0.018
1
8mer
617-644
0.015
1
6mer
460-486
0.004
1
6mer
129-134
0.003
0
RP3-399L15.3
hsa-miR-4782-3p
0.855
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000522697
Biotype: antisense
Gene id: ENSG00000228624
Gene Name: RP3-399L15.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
237-254
0.037
5
6mer
732-758
0.003
0
TSIX
hsa-miR-4782-3p
0.855
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000604411
Biotype: lincRNA
Gene id: ENSG00000270641
Gene Name: TSIX
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
31197-31224
0.007
1
7mer
22154-22173
0.006
1
7mer
16960-16981
0.006
Not Conserved
7mer
6417-6440
0.004
1
7mer
14049-14069
0.003
Not Conserved
6mer
17945-17966
0.002
0
6mer
24079-24099
0.002
1
6mer
8020-8029
0.002
0
6mer
15091-15118
0.002
Not Conserved
6mer
17310-17325
0.002
1
6mer
5790-5815
0.002
1
6mer
31489-31493
0.002
1
6mer
18416-18435
0.001
1
6mer
9960-9984
0.001
0
RP3-399L15.3
hsa-miR-4782-3p
0.855
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000518470
Biotype: antisense
Gene id: ENSG00000228624
Gene Name: RP3-399L15.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
496-513
0.040
5
RP5-1159O4.2
hsa-miR-4782-3p
0.854
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000608770
Biotype: lincRNA
Gene id: ENSG00000272732
Gene Name: RP5-1159O4.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
462-481
0.040
1
CASC14
hsa-miR-4782-3p
0.853
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000566912
Biotype: lincRNA
Gene id: ENSG00000260455
Gene Name: CASC14
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1906-1919
0.033
4
6mer
559-580
0.006
5
CTB-113P19.4
hsa-miR-4782-3p
0.853
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000564471
Biotype: antisense
Gene id: ENSG00000260581
Gene Name: CTB-113P19.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-4782-3p
Sequence: ugauugucuucauaucuagaac
MirBase ID: MIMAT0019945
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
447-459
0.023
1
8mer
176-194
0.016
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept