LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-455-3p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-455-3p
0.964
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-455-3p
Sequence: gcaguccaugggcauauacac
MirBase ID: MIMAT0004784
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
21010-21026
0.015
1
8mer
15918-15932
0.011
0
7mer
63895-63906
0.006
Not Conserved
7mer
78707-78722
0.004
2
8mer
55342-55363
0.003
1
6mer
65424-65439
0.002
2
6mer
20128-20148
0.002
1
7mer
64095-64110
0.002
0
6mer
76906-76919
0.002
2
6mer
23263-23275
0.002
1
7mer
36949-36965
0.002
0
6mer
60056-60075
0.002
2
6mer
73467-73493
0.002
1
6mer
59579-59594
0.001
1
6mer
75984-76000
0.001
1
6mer
37458-37480
0.001
0
6mer
54144-54153
0.001
1
6mer
88032-88056
0.001
1
6mer
64464-64481
0.001
1
6mer
3331-3340
0.001
1
6mer
77400-77417
0.001
0
6mer
36589-36599
0.001
0
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