LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-375


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Gene
miRNA
Score
DIANA Links
AC011518.2
hsa-miR-375
0.937
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000593038
Biotype: lincRNA
Gene id: ENSG00000267133
Gene Name: AC011518.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
375-397
0.048
9
6mer
64-86
0.007
4
ZNF32-AS3
hsa-miR-375
0.937
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000458063
Biotype: antisense
Gene id: ENSG00000223910
Gene Name: ZNF32-AS3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1682-1700
0.038
4
7mer
567-585
0.017
2
HCG16
hsa-miR-375
0.937
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000445544
Biotype: antisense
Gene id: ENSG00000244349
Gene Name: HCG16
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
128-150
0.055
0
XLOC_005302
hsa-miR-375
0.936
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011819
Biotype: transcript isomorph
Gene id: XLOC_005302
Gene Name: XLOC_005302
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4717-4737
0.049
10
6mer
480-499
0.003
1
6mer
1356-1381
0.002
1
ZNF32-AS3
hsa-miR-375
0.935
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_038867.1
Biotype: antisense
Gene id: NR_038867.1 (gene)
Gene Name: ZNF32-AS3
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1682-1700
0.038
4
7mer
567-585
0.017
2
MGC27382
hsa-miR-375
0.935
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000436742
Biotype: lincRNA
Gene id: ENSG00000237413
Gene Name: MGC27382
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
62-83
0.031
3
7mer
512-535
0.015
1
6mer
1182-1200
0.005
1
6mer
1505-1524
0.004
1
LOC401497
hsa-miR-375
0.934
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_046204.1
Biotype: lincRNA
Gene id: NR_046204.1 (gene)
Gene Name: LOC401497
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
111-137
0.025
1
7mer
228-243
0.023
1
6mer
756-775
0.005
1
AC106801.1
hsa-miR-375
0.934
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000518054
Biotype: antisense
Gene id: ENSG00000253519
Gene Name: AC106801.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1655-1682
0.021
7
7mer
1740-1757
0.019
4
7mer
1581-1599
0.014
0
LINC00238
hsa-miR-375
0.934
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000411796
Biotype: lincRNA
Gene id: ENSG00000196553
Gene Name: LINC00238
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
560-586
0.014
1
6mer
294-310
0.014
9
6mer
443-462
0.009
8
7mer
927-948
0.007
Not Conserved
6mer
938-964
0.006
2
6mer
469-496
0.005
5
LINC01305
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000420866
Biotype: lincRNA
Gene id: ENSG00000231453
Gene Name: LINC01305
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
A549 Lung Cancer/Malignant
- Placenta Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3071-3098
0.035
4
6mer
2654-2673
0.009
10
6mer
2861-2873
0.005
1
6mer
1746-1760
0.004
9
LINC00238
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000450299
Biotype: lincRNA
Gene id: ENSG00000196553
Gene Name: LINC00238
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
391-417
0.018
1
6mer
274-293
0.014
8
7mer
669-690
0.008
Not Conserved
6mer
680-706
0.007
2
6mer
300-327
0.007
5
AC068039.4
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000416361
Biotype: antisense
Gene id: ENSG00000228389
Gene Name: AC068039.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
286-301
0.017
0
6mer
1765-1789
0.012
0
6mer
1785-1795
0.012
0
6mer
287-309
0.009
0
6mer
1758-1783
0.005
Not Conserved
LL22NC03-22D1.1
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624601
Biotype: lincRNA
Gene id: ENSG00000279003
Gene Name: LL22NC03-22D1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
20138-20152
0.007
1
7mer
25235-25262
0.005
0
7mer
11363-11380
0.004
0
6mer
28906-28927
0.004
0
6mer
1466-1481
0.004
7
7mer
6397-6418
0.003
1
7mer
27663-27686
0.002
0
6mer
14395-14419
0.002
2
6mer
15116-15137
0.002
2
6mer
1645-1667
0.002
4
7mer
20138-20161
0.002
1
6mer
3399-3423
0.002
1
6mer
4856-4879
0.002
2
6mer
12652-12672
0.002
0
6mer
20475-20500
0.002
1
6mer
20849-20874
0.002
1
6mer
26903-26921
0.002
1
6mer
10617-10637
0.002
0
6mer
19005-19022
0.001
1
6mer
6216-6242
0.001
1
6mer
7798-7825
0.001
0
AC005154.6
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000355837
Biotype: retained_intron
Gene id: ENSG00000196295
Gene Name: AC005154.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
5776-5790
0.022
0
7mer
4257-4281
0.006
0
6mer
471-494
0.006
1
6mer
731-756
0.003
3
6mer
736-763
0.003
2
6mer
721-733
0.002
0
6mer
12086-12112
0.002
0
6mer
7514-7532
0.002
1
6mer
9109-9133
0.002
2
6mer
3647-3664
0.002
0
6mer
1260-1286
0.002
0
6mer
5312-5331
0.002
1
6mer
754-777
0.001
1
XLOC_008618
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00017678
Biotype: transcript isomorph
Gene id: XLOC_008618
Gene Name: XLOC_008618
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3112-3132
0.045
9
6mer
2163-2184
0.003
0
7mer
1594-1605
0.002
1
6mer
1571-1575
0.002
0
6mer
1358-1372
0.002
0
XLOC_009222
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019399
Biotype: transcript isomorph
Gene id: XLOC_009222
Gene Name: XLOC_009222
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
37-57
0.020
0
6mer
5636-5656
0.014
0
6mer
1941-1964
0.007
0
6mer
4085-4103
0.006
0
6mer
2052-2072
0.004
0
6mer
4101-4113
0.002
0
6mer
4127-4131
0.001
Not Conserved
RP11-375A5.1
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000436206
Biotype: antisense
Gene id: ENSG00000233099
Gene Name: RP11-375A5.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
27-50
0.054
Not Conserved
CTD-2339F6.1
hsa-miR-375
0.933
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518934
Biotype: lincRNA
Gene id: ENSG00000254139
Gene Name: CTD-2339F6.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
391-408
0.032
5
7mer
445-461
0.013
3
6mer
1861-1874
0.005
1
6mer
936-953
0.004
1
XLOC_006809
hsa-miR-375
0.932
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014492
Biotype: transcript isomorph
Gene id: XLOC_006809
Gene Name: XLOC_006809
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
391-408
0.032
5
7mer
445-461
0.013
3
6mer
1861-1874
0.005
1
6mer
936-953
0.004
1
LINC00293
hsa-miR-375
0.932
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518962
Biotype: lincRNA
Gene id: ENSG00000253314
Gene Name: LINC00293
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-375
Sequence: uuuguucguucggcucgcguga
MirBase ID: MIMAT0000728
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
346-364
0.046
1
6mer
56-75
0.008
0
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