LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-372-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP11-583F2.2
hsa-miR-372-3p
0.887
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000583416
Biotype: lincRNA
Gene id: ENSG00000265912
Gene Name: RP11-583F2.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2262-2286
0.018
1
8mer
770-793
0.012
1
6mer
1995-2017
0.008
1
6mer
1755-1775
0.007
1
XLOC_012131
hsa-miR-372-3p
0.885
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00025324
Biotype: transcript isomorph
Gene id: XLOC_012131
Gene Name: XLOC_012131
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Colon Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
204-228
0.044
0
RP5-1014D13.2
hsa-miR-372-3p
0.884
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623726
Biotype: sense_overlapping
Gene id: ENSG00000279738
Gene Name: RP5-1014D13.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6191-6213
0.013
1
6mer
19363-19381
0.005
2
7mer
5023-5045
0.005
0
8mer
18668-18678
0.004
1
6mer
8182-8206
0.002
1
9mer
7496-7523
0.002
0
9mer
10154-10178
0.002
0
9mer
6592-6612
0.002
0
6mer
4535-4547
0.001
1
9mer
5892-5916
0.001
0
9mer
7172-7191
0.001
0
6mer
9513-9531
0.001
0
6mer
17699-17718
0.001
2
9mer
3086-3110
0.001
0
9mer
11195-11219
0.001
Not Conserved
6mer
6259-6283
0.001
0
XLOC_004839
hsa-miR-372-3p
0.882
mTTBlnEmP

Gene Details
Chromosome: chr5
Transcript: TCONS_00010350
Biotype: transcript isomorph
Gene id: XLOC_004839
Gene Name: XLOC_004839
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4098-4114
0.022
1
7mer
1266-1285
0.010
0
6mer
612-629
0.004
1
7mer
1029-1047
0.003
2
8mer
2266-2281
0.002
Not Conserved
6mer
2592-2608
0.002
3
6mer
1222-1237
0.001
Not Conserved
RP11-440L14.1
hsa-miR-372-3p
0.881
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000503185
Biotype: antisense
Gene id: ENSG00000249592
Gene Name: RP11-440L14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
303-327
0.043
1
XLOC_010279
hsa-miR-372-3p
0.881
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020261
Biotype: transcript isomorph
Gene id: XLOC_010279
Gene Name: XLOC_010279
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1216-1240
0.023
0
9mer
1522-1546
0.020
0
RP13-991F5.2
hsa-miR-372-3p
0.881
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000582249
Biotype: antisense
Gene id: ENSG00000266445
Gene Name: RP13-991F5.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
108-132
0.043
0
RP11-424G14.1
hsa-miR-372-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000566193
Biotype: lincRNA
Gene id: ENSG00000260197
Gene Name: RP11-424G14.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
513-539
0.027
0
6mer
174-201
0.007
0
6mer
494-516
0.005
0
6mer
1088-1104
0.004
0
LOC100129917
hsa-miR-372-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_036512.1
Biotype: lincRNA
Gene id: NR_036512.1 (gene)
Gene Name: LOC100129917
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
303-327
0.043
1
LOC100129917
hsa-miR-372-3p
0.880
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: NR_036511.1
Biotype: lincRNA
Gene id: NR_036511.1 (gene)
Gene Name: LOC100129917
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
303-327
0.043
1
AC144831.1
hsa-miR-372-3p
0.878
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000573312
Biotype: lincRNA
Gene id: ENSG00000261888
Gene Name: AC144831.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2351-2373
0.024
1
8mer
370-394
0.013
1
6mer
2074-2096
0.006
1
SGMS1-AS1
hsa-miR-372-3p
0.878
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000443374
Biotype: antisense
Gene id: ENSG00000226200
Gene Name: SGMS1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1760-1778
0.007
1
9mer
11904-11928
0.006
0
7mer
1129-1136
0.005
1
9mer
4101-4119
0.005
0
6mer
12291-12312
0.005
1
6mer
12283-12302
0.004
1
6mer
2636-2661
0.002
2
6mer
8137-8163
0.002
3
6mer
8986-9006
0.002
1
6mer
10026-10044
0.002
1
9mer
2319-2339
0.002
0
6mer
3168-3184
0.002
1
CTA-796E4.5
hsa-miR-372-3p
0.876
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
29201-29223
0.006
1
6mer
125-143
0.005
1
7mer
16018-16044
0.004
2
6mer
1370-1392
0.003
0
6mer
11220-11243
0.003
2
6mer
31097-31119
0.002
0
6mer
1986-2008
0.002
3
6mer
24123-24143
0.002
0
6mer
18321-18344
0.002
2
6mer
31170-31187
0.002
0
9mer
9296-9320
0.002
1
6mer
22035-22058
0.002
0
6mer
3281-3304
0.001
1
6mer
8792-8812
0.001
1
6mer
20392-20410
0.001
Not Conserved
6mer
8182-8201
0.001
Not Conserved
6mer
19764-19786
0.001
0
6mer
29350-29372
0.001
Not Conserved
6mer
11302-11324
0.001
1
LOC100132356
hsa-miR-372-3p
0.875
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: NR_034127.1
Biotype: antisense
Gene id: NR_034127.1 (gene)
Gene Name: LOC100132356
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1623-1642
0.043
1
AC004447.2
hsa-miR-372-3p
0.874
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000594142
Biotype: antisense
Gene id: ENSG00000269131
Gene Name: AC004447.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
195-219
0.021
6
8mer
1757-1777
0.014
1
7mer
2154-2173
0.008
1
HAND2-AS1
hsa-miR-372-3p
0.873
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000507062
Biotype: antisense
Gene id: ENSG00000237125
Gene Name: HAND2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1783-1804
0.019
7
8mer
3427-3448
0.014
8
6mer
1506-1525
0.004
6
6mer
332-350
0.004
1
6mer
1580-1604
0.001
4
RP11-34P13.13
hsa-miR-372-3p
0.873
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000484859
Biotype: antisense
Gene id: ENSG00000241860
Gene Name: RP11-34P13.13
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
- Liver Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
87-111
0.017
0
6mer
3887-3904
0.011
1
6mer
4484-4504
0.008
0
6mer
3814-3836
0.007
1
C10orf40
hsa-miR-372-3p
0.872
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000521074
Biotype: lincRNA
Gene id: ENSG00000235931
Gene Name: C10orf40
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
420-436
0.018
1
8mer
2752-2776
0.010
1
6mer
267-289
0.005
1
7mer
1468-1491
0.004
0
8mer
2089-2113
0.003
0
9mer
1027-1051
0.002
0
LINC00520
hsa-miR-372-3p
0.872
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: NR_026797.1
Biotype: lincRNA
Gene id: NR_026797.1 (gene)
Gene Name: LINC00520
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
64-90
0.037
1
6mer
259-277
0.005
1
AP000487.4
hsa-miR-372-3p
0.872
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000324630
Biotype: antisense
Gene id: ENSG00000254495
Gene Name: AP000487.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-372-3p
Sequence: aaagugcugcgacauuugagcgu
MirBase ID: MIMAT0000724
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13-30
0.042
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept