LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-34a-5p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-34a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-34a-5p
Sequence: uggcagugucuuagcugguugu
MirBase ID: MIMAT0000255
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
22539-22565
0.010
1
8mer
62343-62355
0.009
1
8mer
64161-64181
0.008
2
8mer
33721-33744
0.007
0
7mer
41522-41540
0.007
1
7mer
52827-52842
0.007
1
7mer
61776-61802
0.006
2
8mer
77440-77465
0.006
1
8mer
25684-25703
0.005
0
7mer
65466-65491
0.004
1
8mer
55169-55196
0.004
0
8mer+wobble
81618-81645
0.004
1
7mer
80427-80441
0.003
1
7mer
54855-54870
0.003
1
7mer
62765-62791
0.003
1
7mer
59235-59255
0.002
2
6mer
56456-56473
0.002
3
6mer
46862-46883
0.002
6
6mer
91607-91622
0.002
0
7mer
44956-44978
0.002
1
6mer
80721-80746
0.002
5
6mer
69852-69877
0.002
0
6mer
78257-78277
0.002
0
6mer
5768-5794
0.002
1
6mer
85903-85926
0.002
3
6mer
50955-50978
0.002
2
6mer
3330-3355
0.001
1
6mer
36948-36972
0.001
0
6mer
76248-76266
0.001
2
6mer
6490-6515
0.001
1
6mer
70449-70474
0.001
0
6mer
61275-61297
0.001
3
6mer
5192-5203
0.001
1
6mer
9069-9093
0.001
1
6mer
86779-86798
0.001
2
6mer
37309-37328
0.001
0
6mer
64367-64387
0.001
3
6mer
47109-47128
0.001
1
6mer
82261-82272
0.001
1
6mer
47968-47993
0.001
1
6mer
57019-57035
0.001
1
6mer
68373-68400
0.001
2
6mer
31350-31368
0.001
0
6mer
45610-45631
0.001
1
7mer
36796-36810
0.001
0
6mer
59909-59929
0.001
1
6mer
85766-85782
0.001
3
6mer
62603-62621
0.001
0
6mer
82444-82466
0.001
3
6mer
31583-31606
0.001
0
6mer
56167-56186
0.001
1
6mer
59794-59814
0.001
1
6mer
47431-47443
0.001
0
6mer
86630-86657
0.001
1
6mer
74216-74237
0.001
0
6mer
36808-36829
0.001
0
6mer
62305-62327
0.001
1
6mer
36606-36622
0.001
Not Conserved
6mer
86658-86677
0.000
1
6mer
37246-37264
0.000
0
6mer
37228-37250
0.000
0
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