LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-345-5p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-345-5p
0.982
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-345-5p
Sequence: gcugacuccuaguccagggcuc
MirBase ID: MIMAT0000772
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
90283-90308
0.005
1
7mer
80877-80902
0.004
2
7mer
90679-90700
0.004
1
7mer
90238-90262
0.003
1
7mer
65317-65335
0.003
2
7mer
68861-68879
0.003
1
8mer
90381-90404
0.003
2
7mer
61388-61397
0.003
1
6mer
40935-40939
0.003
0
7mer
66620-66638
0.003
4
7mer
75620-75628
0.003
0
7mer
59843-59860
0.003
0
8mer
37761-37782
0.002
0
7mer
67347-67358
0.002
2
6mer
13512-13530
0.002
0
6mer
91051-91076
0.002
0
6mer
23901-23917
0.002
1
6mer
46391-46410
0.002
1
6mer
19799-19824
0.002
1
6mer
12558-12578
0.002
1
6mer
89757-89771
0.002
1
6mer
85817-85838
0.002
2
6mer
75234-75257
0.001
2
6mer
63218-63243
0.001
1
6mer
43717-43733
0.001
4
6mer
37109-37132
0.001
0
6mer
82960-82975
0.001
0
6mer
46801-46813
0.001
0
6mer
78070-78078
0.001
1
6mer
52369-52389
0.001
1
6mer
65185-65209
0.001
1
6mer
64810-64829
0.001
1
6mer
64548-64559
0.001
0
6mer
78664-78680
0.001
1
6mer
90535-90555
0.001
2
6mer
62576-62594
0.001
2
6mer
37641-37660
0.001
0
8mer+mismatch
77515-77539
0.001
0
6mer
85735-85760
0.000
Not Conserved
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