LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-29b-3p

ENST00000623130

or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC006548.28
hsa-miR-29b-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-29b-3p
Sequence: uagcaccauuugaaaucaguguu
MirBase ID: MIMAT0000100
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
45671-45684
0.013
Not Conserved
7mer
72855-72870
0.012
1
8mer
3272-3286
0.009
2
8mer
2019-2033
0.008
1
8mer
47796-47822
0.007
Not Conserved
8mer
71349-71369
0.007
Not Conserved
7mer
33824-33843
0.005
0
8mer
8096-8114
0.004
1
7mer
40616-40628
0.004
1
7mer
27647-27669
0.003
1
7mer
13498-13518
0.003
1
7mer
53302-53324
0.003
Not Conserved
7mer
63086-63104
0.002
1
7mer
62068-62084
0.002
0
7mer
37153-37175
0.002
0
8mer+mismatch
3672-3691
0.002
1
7mer
38169-38195
0.002
Not Conserved
7mer
13111-13132
0.002
1
6mer
42397-42414
0.002
0
6mer
77062-77079
0.002
Not Conserved
6mer
17924-17944
0.001
1
6mer
76747-76762
0.001
0
6mer
53615-53632
0.001
Not Conserved
7mer
23617-23637
0.001
0
6mer
23724-23743
0.001
2
6mer
6447-6460
0.001
1
6mer
64350-64366
0.001
1
6mer
25465-25488
0.001
1
6mer
22464-22477
0.001
1
6mer
61864-61886
0.001
0
6mer
45361-45386
0.001
Not Conserved
6mer
47213-47234
0.001
Not Conserved
6mer
62370-62389
0.001
1
6mer
10537-10562
0.001
1
6mer
17785-17801
0.001
1
6mer
3153-3169
0.001
0
6mer
63043-63068
0.000
0
6mer
40549-40563
0.000
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept