LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-28-5p

ENST00000608023

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Filters

Gene
miRNA
Score
DIANA Links
C1orf132
hsa-miR-28-5p
0.767
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000608023
Biotype: lincRNA
Gene id: ENSG00000203709
Gene Name: C1orf132
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-28-5p
Sequence: aaggagcucacagucuauugag
MirBase ID: MIMAT0000085
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
14934-14940
0.005
1
6mer
14366-14392
0.003
1
6mer
5874-5896
0.003
2
6mer
864-880
0.002
2
6mer
3475-3498
0.002
2
6mer
14264-14285
0.002
1
6mer
4914-4935
0.002
2
6mer
12822-12843
0.002
1
6mer
11852-11872
0.002
1
6mer
10374-10391
0.002
0
6mer
6793-6814
0.001
2
6mer
6283-6303
0.001
1
6mer
1891-1912
0.001
0
6mer
2243-2266
0.001
Not Conserved
6mer
5302-5321
0.001
1
6mer
6262-6277
0.001
1
6mer
6252-6273
0.000
0
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