LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-21-5p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-21-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
163162-163184
0.015
8
8mer
98274-98294
0.009
1
8mer
92585-92610
0.007
1
7mer
133420-133440
0.007
0
7mer
171112-171133
0.006
1
7mer
166504-166516
0.006
5
8mer
35633-35659
0.005
0
7mer
89041-89061
0.005
1
7mer
97351-97368
0.004
1
7mer
36564-36583
0.004
0
7mer
79598-79610
0.004
1
7mer
183660-183677
0.004
3
8mer+wobble
117616-117636
0.003
1
7mer
185008-185031
0.003
1
7mer
100924-100945
0.003
1
7mer
61803-61809
0.003
1
6mer
126961-126981
0.003
6
6mer
124930-124942
0.003
4
8mer+wobble
210038-210061
0.003
0
6mer
5813-5839
0.003
4
6mer
158460-158473
0.003
1
7mer
171187-171206
0.003
0
6mer
149439-149460
0.002
6
7mer
82691-82713
0.002
1
6mer
81414-81426
0.002
8
6mer
123923-123947
0.002
6
6mer
128067-128071
0.002
1
6mer
217129-217146
0.002
1
6mer
1182-1200
0.002
4
6mer
128997-129014
0.002
5
6mer
249729-249750
0.002
0
6mer
159826-159850
0.002
1
6mer
89311-89335
0.002
4
6mer
181727-181749
0.002
0
6mer
11198-11215
0.002
1
6mer
205663-205689
0.002
1
6mer
154762-154766
0.002
3
6mer
16033-16050
0.002
2
6mer
125417-125441
0.002
6
6mer
168546-168571
0.002
1
6mer
63767-63787
0.002
1
6mer
214356-214382
0.002
2
7mer
33539-33551
0.002
2
6mer
112338-112360
0.002
4
6mer
184720-184735
0.002
1
6mer
53878-53901
0.002
1
6mer
182545-182563
0.002
1
6mer
59420-59429
0.002
1
6mer
144539-144555
0.002
4
6mer
69120-69146
0.002
Not Conserved
6mer
249388-249410
0.002
0
6mer
110624-110649
0.001
1
6mer
55207-55231
0.001
0
6mer
33493-33514
0.001
4
6mer
230624-230637
0.001
0
6mer
174754-174773
0.001
2
6mer
13850-13854
0.001
0
6mer
108495-108520
0.001
1
6mer
30667-30690
0.001
1
6mer
52293-52314
0.001
1
6mer
29657-29682
0.001
0
6mer
256313-256329
0.001
1
6mer
140201-140224
0.001
2
6mer
72273-72287
0.001
0
6mer
172580-172603
0.001
1
6mer
145146-145160
0.001
0
6mer
144814-144834
0.001
0
6mer
263031-263053
0.001
0
6mer
13415-13431
0.001
1
6mer
12003-12024
0.001
0
6mer
28892-28919
0.001
1
6mer
126584-126598
0.001
1
6mer
171352-171371
0.001
0
6mer
246353-246377
0.001
0
6mer
205470-205490
0.001
0
6mer
189303-189317
0.001
1
6mer
66662-66680
0.001
1
6mer
4863-4886
0.001
Not Conserved
6mer
84249-84274
0.001
2
6mer
21281-21299
0.001
1
6mer
171142-171162
0.001
0
6mer
5820-5843
0.000
0
6mer
145158-145172
0.000
1
6mer
81417-81439
0.000
1
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