LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-21-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AF127936.7
hsa-miR-21-5p
0.807
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000432230
Biotype: lincRNA
Gene id: ENSG00000235609
Gene Name: AF127936.7
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4023-4039
0.008
5
7mer
3354-3374
0.007
3
7mer
4527-4549
0.007
0
6mer
5469-5483
0.005
3
6mer
326-350
0.005
1
6mer
4751-4764
0.002
3
RP11-356J5.12
hsa-miR-21-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000527511
Biotype: lincRNA
Gene id: ENSG00000250303
Gene Name: RP11-356J5.12
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
340-353
0.018
1
7mer
80-102
0.016
1
TPTEP1
hsa-miR-21-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000585784
Biotype: lincRNA
Gene id: ENSG00000100181
Gene Name: TPTEP1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
247-266
0.034
1
XLOC_008559
hsa-miR-21-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00018783
Biotype: transcript isomorph
Gene id: XLOC_008559
Gene Name: XLOC_008559
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
390-409
0.016
1
7mer
523-537
0.010
1
7mer
2424-2446
0.008
0
XLOC_010719
hsa-miR-21-5p
0.805
mTTBlnEmP

Gene Details
Chromosome: chr13
Transcript: TCONS_00022108
Biotype: transcript isomorph
Gene id: XLOC_010719
Gene Name: XLOC_010719
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
690-703
0.027
1
6mer
229-246
0.004
1
6mer
1706-1730
0.001
1
6mer
1485-1501
0.001
0
RP1-32I10.10
hsa-miR-21-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000406912
Biotype: lincRNA
Gene id: ENSG00000220702
Gene Name: RP1-32I10.10
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
547-570
0.034
1
RP11-587H10.2
hsa-miR-21-5p
0.804
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523284
Biotype: lincRNA
Gene id: ENSG00000253634
Gene Name: RP11-587H10.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
209-232
0.034
9
GPC6-AS1
hsa-miR-21-5p
0.803
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000436329
Biotype: antisense
Gene id: ENSG00000236520
Gene Name: GPC6-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
7-13
0.034
Not Conserved
LOC339593
hsa-miR-21-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: NR_038972.1
Biotype: lincRNA
Gene id: NR_038972.1 (gene)
Gene Name: LOC339593
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
441-464
0.031
1
6mer
1574-1601
0.003
3
LINC00664
hsa-miR-21-5p
0.800
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599078
Biotype: lincRNA
Gene id: ENSG00000268658
Gene Name: LINC00664
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3440-3459
0.016
0
6mer
3717-3731
0.014
1
6mer
2143-2164
0.004
1
FAM66E
hsa-miR-21-5p
0.799
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000533615
Biotype: lincRNA
Gene id: ENSG00000225725
Gene Name: FAM66E
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1176-1198
0.020
1
7mer
1775-1793
0.010
0
6mer
1345-1363
0.003
0
XLOC_012784
hsa-miR-21-5p
0.798
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026436
Biotype: transcript isomorph
Gene id: XLOC_012784
Gene Name: XLOC_012784
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HREpiC Kidney Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
572-589
0.021
0
6mer
1696-1707
0.012
0
AC099344.3
hsa-miR-21-5p
0.798
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000454489
Biotype: lincRNA
Gene id: ENSG00000231403
Gene Name: AC099344.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
410-428
0.033
4
RP13-753N3.1
hsa-miR-21-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584157
Biotype: antisense
Gene id: ENSG00000263531
Gene Name: RP13-753N3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
609-629
0.033
0
AC009227.3
hsa-miR-21-5p
0.796
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000432599
Biotype: lincRNA
Gene id: ENSG00000238004
Gene Name: AC009227.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
445-464
0.033
0
LINC01140
hsa-miR-21-5p
0.794
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000461990
Biotype: lincRNA
Gene id: ENSG00000267272
Gene Name: LINC01140
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2927-2939
0.028
10
6mer
948-966
0.005
7
KB-431C1.5
hsa-miR-21-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000606361
Biotype: antisense
Gene id: ENSG00000272037
Gene Name: KB-431C1.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
73-97
0.014
1
7mer
830-845
0.010
2
7mer
396-401
0.009
1
XIST
hsa-miR-21-5p
0.792
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000429829
Biotype: lincRNA
Gene id: ENSG00000229807
Gene Name: XIST
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3438-3457
0.011
0
6mer
201-205
0.007
3
7mer
18380-18404
0.007
2
7mer
3970-3982
0.003
0
6mer
4498-4514
0.002
2
6mer
3090-3113
0.002
0
MIR17HG
hsa-miR-21-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000582141
Biotype: retained_intron
Gene id: ENSG00000215417
Gene Name: MIR17HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2390-2407
0.032
0
RP11-613F22.8
hsa-miR-21-5p
0.791
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000539313
Biotype: sense_intronic
Gene id: ENSG00000256588
Gene Name: RP11-613F22.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
511-530
0.019
0
7mer
442-451
0.010
2
6mer
32-42
0.004
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept