LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-21-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
RP3-323A16.1
hsa-miR-21-5p
0.929
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
20390-20408
0.021
1
7mer
24477-24489
0.004
0
7mer
40745-40771
0.002
1
7mer
36157-36171
0.002
1
6mer
25789-25816
0.002
1
6mer
44132-44159
0.002
2
6mer
41545-41568
0.002
1
6mer
13695-13717
0.002
3
6mer
34136-34162
0.002
3
6mer
25529-25549
0.002
1
6mer
40434-40449
0.002
1
6mer
5891-5915
0.002
Not Conserved
6mer
43757-43775
0.001
2
6mer
8963-8985
0.001
0
6mer
13192-13217
0.001
0
6mer
20501-20510
0.001
1
6mer
51252-51276
0.001
Not Conserved
6mer
39569-39586
0.001
1
6mer
7816-7831
0.001
0
6mer
5928-5949
0.001
0
AL109763.2
hsa-miR-21-5p
0.928
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_109925.1
Biotype: lincRNA
Gene id: NR_109925.1 (gene)
Gene Name: AL109763.2
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
60-85
0.052
Not Conserved
XLOC_000456
hsa-miR-21-5p
0.926
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001191
Biotype: transcript isomorph
Gene id: XLOC_000456
Gene Name: XLOC_000456
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
264-283
0.052
1
KB-1183D5.18
hsa-miR-21-5p
0.924
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624642
Biotype: lincRNA
Gene id: ENSG00000279920
Gene Name: KB-1183D5.18
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
104-117
0.051
0
RP11-359B12.2
hsa-miR-21-5p
0.923
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000543290
Biotype: antisense
Gene id: ENSG00000250132
Gene Name: RP11-359B12.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
208-231
0.051
4
RP11-262H14.3
hsa-miR-21-5p
0.921
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000438699
Biotype: lincRNA
Gene id: ENSG00000234665
Gene Name: RP11-262H14.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
800-820
0.051
0
AL109763.2
hsa-miR-21-5p
0.921
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000437492
Biotype: lincRNA
Gene id: ENSG00000224141
Gene Name: AL109763.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
60-85
0.051
Not Conserved
PLS3-AS1
hsa-miR-21-5p
0.919
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000606397
Biotype: antisense
Gene id: ENSG00000271826
Gene Name: PLS3-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
42-61
0.050
1
RP11-357K6.3
hsa-miR-21-5p
0.918
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000544515
Biotype: lincRNA
Gene id: ENSG00000256149
Gene Name: RP11-357K6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
275-297
0.039
1
7mer
453-478
0.007
Not Conserved
6mer
203-216
0.004
1
CFLAR-AS1
hsa-miR-21-5p
0.916
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000594911
Biotype: antisense
Gene id: ENSG00000226312
Gene Name: CFLAR-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
201-226
0.040
1
6mer
75-100
0.006
4
6mer
36-52
0.004
2
RP11-449D8.1
hsa-miR-21-5p
0.916
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000583558
Biotype: lincRNA
Gene id: ENSG00000265485
Gene Name: RP11-449D8.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
139-152
0.044
4
6mer
143-168
0.006
4
AC009299.2
hsa-miR-21-5p
0.914
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000435692
Biotype: antisense
Gene id: ENSG00000235724
Gene Name: AC009299.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
295-311
0.049
11
DNAJC9-AS1
hsa-miR-21-5p
0.914
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: NR_038373.1
Biotype: antisense
Gene id: NR_038373.1 (gene)
Gene Name: DNAJC9-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2708-2722
0.045
1
6mer
364-381
0.004
3
XLOC_003771
hsa-miR-21-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008316
Biotype: transcript isomorph
Gene id: XLOC_003771
Gene Name: XLOC_003771
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
475-492
0.048
1
DNAJC9-AS1
hsa-miR-21-5p
0.907
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000440197
Biotype: antisense
Gene id: ENSG00000236756
Gene Name: DNAJC9-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2715-2729
0.043
1
6mer
371-388
0.004
3
MIR137HG
hsa-miR-21-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000413670
Biotype: lincRNA
Gene id: ENSG00000225206
Gene Name: MIR137HG
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
452-470
0.043
6
6mer
638-654
0.003
2
6mer
1255-1278
0.002
1
DLEU1
hsa-miR-21-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: NR_109974.1
Biotype: sense
Gene id: NR_109974.1 (gene)
Gene Name: DLEU1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1417-1439
0.048
1
RP11-63E9.1
hsa-miR-21-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000565399
Biotype: lincRNA
Gene id: ENSG00000259828
Gene Name: RP11-63E9.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
328-351
0.038
3
7mer
1639-1664
0.006
1
6mer
3225-3250
0.003
1
6mer
1742-1758
0.001
1
SMC2-AS1
hsa-miR-21-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000603487
Biotype: lincRNA
Gene id: ENSG00000270332
Gene Name: SMC2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
- Heart Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5788-5809
0.039
6
6mer
412-416
0.004
0
6mer
2082-2101
0.002
1
6mer
3129-3146
0.002
1
LINC01004
hsa-miR-21-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_039981.2
Biotype: lincRNA
Gene id: NR_039981.2 (gene)
Gene Name: LINC01004
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-21-5p
Sequence: uagcuuaucagacugauguuga
MirBase ID: MIMAT0000076
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8563-8582
0.019
1
6mer
91-114
0.010
4
7mer
7087-7113
0.005
1
6mer
8832-8850
0.004
1
6mer
671-685
0.003
1
6mer
5989-6002
0.003
5
6mer
6273-6300
0.002
1
6mer
5401-5416
0.002
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept