LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-20a-5p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-20a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-20a-5p
Sequence: uaaagugcuuauagugcagguag
MirBase ID: MIMAT0000075
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
175909-175927
0.014
3
9mer
89496-89519
0.013
3
8mer
10725-10745
0.012
0
8mer
14011-14035
0.012
0
8mer
165221-165239
0.011
4
8mer
220519-220543
0.009
1
8mer
52894-52910
0.008
4
8mer
107247-107269
0.008
1
8mer
225492-225516
0.008
1
8mer
178035-178056
0.007
1
8mer
251110-251133
0.007
0
7mer
50478-50500
0.006
0
7mer
133489-133512
0.006
1
7mer
193799-193819
0.006
0
7mer
16898-16922
0.005
1
9mer
256647-256667
0.005
0
7mer
924-934
0.005
1
8mer
199223-199247
0.005
1
7mer
92503-92525
0.005
2
8mer
52131-52155
0.005
1
7mer
161222-161243
0.005
0
7mer
172347-172358
0.005
2
7mer
80779-80799
0.005
1
7mer
127892-127913
0.004
0
8mer
155511-155532
0.004
1
8mer
67833-67857
0.004
1
7mer
56232-56249
0.004
1
8mer
180846-180864
0.004
1
8mer
221547-221567
0.004
1
8mer
234646-234670
0.004
1
8mer
213967-213982
0.004
2
8mer
261772-261791
0.004
0
7mer
160691-160714
0.004
3
8mer
250219-250246
0.004
0
7mer
175132-175156
0.004
2
7mer
81576-81599
0.004
6
7mer
199899-199916
0.004
1
8mer
244863-244887
0.004
0
8mer
77174-77194
0.004
1
8mer
67545-67569
0.003
1
8mer
11449-11473
0.003
1
8mer
27724-27745
0.003
0
8mer
14156-14180
0.003
1
8mer
236472-236496
0.003
1
8mer
135104-135131
0.003
1
8mer
109484-109504
0.003
1
6mer
131792-131819
0.003
7
8mer
38248-38267
0.003
1
7mer
104450-104470
0.003
2
7mer
145524-145539
0.003
0
8mer
239060-239080
0.003
1
8mer
237872-237892
0.003
1
8mer
262098-262117
0.003
1
8mer
102888-102907
0.003
1
8mer
188881-188905
0.003
1
8mer
249438-249458
0.003
0
8mer
225068-225092
0.003
1
8mer
253387-253411
0.003
1
8mer
64967-64991
0.003
1
8mer
122233-122252
0.003
1
6mer
100356-100378
0.003
7
8mer
223514-223538
0.003
1
6mer
267034-267054
0.003
0
8mer
251548-251572
0.003
0
8mer
114894-114918
0.003
1
8mer
192473-192497
0.003
0
8mer
60218-60242
0.003
1
8mer
252057-252081
0.003
1
8mer
187101-187125
0.003
0
6mer
182709-182734
0.003
7
8mer
14855-14875
0.003
0
6mer
145004-145029
0.003
7
8mer
231650-231673
0.003
0
8mer
263098-263122
0.003
0
8mer
73054-73074
0.003
0
8mer
213280-213300
0.003
0
8mer
174440-174464
0.003
0
7mer
101870-101879
0.003
1
8mer
8822-8842
0.003
0
7mer
166755-166774
0.003
1
6mer
150454-150475
0.003
5
7mer
236279-236300
0.003
0
6mer
127550-127569
0.003
2
6mer
145672-145695
0.002
8
7mer
219872-219892
0.002
1
6mer
183329-183354
0.002
4
8mer
84837-84855
0.002
2
8mer
206108-206131
0.002
0
6mer
17522-17546
0.002
1
8mer
209139-209159
0.002
1
8mer
45037-45061
0.002
0
8mer
247889-247909
0.002
0
8mer
37464-37484
0.002
Not Conserved
6mer
131045-131064
0.002
1
8mer
193330-193349
0.002
Not Conserved
6mer
43071-43091
0.002
1
6mer
169328-169340
0.002
0
6mer
197119-197137
0.002
1
6mer
131353-131375
0.002
3
7mer
23495-23517
0.002
1
8mer
177417-177441
0.002
1
6mer
166143-166167
0.002
3
6mer
254578-254600
0.002
5
8mer
181146-181170
0.002
Not Conserved
6mer
52419-52433
0.002
4
6mer
13490-13513
0.002
1
6mer
203679-203700
0.002
0
8mer
202786-202806
0.002
Not Conserved
6mer
71209-71234
0.002
1
8mer
167715-167739
0.002
1
6mer
116863-116887
0.002
1
7mer
121444-121464
0.002
1
6mer
11217-11244
0.002
1
6mer
69920-69943
0.002
1
8mer
231045-231065
0.002
0
6mer
92171-92189
0.002
3
6mer
84812-84832
0.002
3
6mer
250848-250868
0.002
0
6mer
51815-51832
0.002
3
6mer
94125-94141
0.002
5
6mer
260794-260814
0.002
1
6mer
151340-151355
0.002
2
6mer
157689-157716
0.002
1
6mer
184854-184867
0.002
1
6mer
4883-4900
0.002
1
6mer
92343-92366
0.002
1
6mer
198075-198094
0.002
0
6mer
175015-175037
0.002
0
6mer
140740-140767
0.002
1
6mer
109797-109817
0.002
1
6mer
202300-202318
0.002
Not Conserved
6mer
18591-18611
0.002
1
6mer
89889-89915
0.002
1
6mer
147616-147640
0.002
2
6mer
100982-101000
0.002
2
6mer
160525-160540
0.002
0
6mer
109029-109039
0.002
1
6mer
57314-57324
0.002
1
6mer
185776-185802
0.002
2
6mer
187396-187413
0.002
3
6mer
244007-244026
0.002
1
6mer
150806-150811
0.002
0
6mer
136113-136131
0.002
1
6mer
175535-175557
0.002
1
6mer
194481-194494
0.002
1
6mer
60609-60632
0.002
1
6mer
250001-250021
0.001
0
6mer
177312-177337
0.001
1
6mer
113936-113955
0.001
1
6mer
153974-153999
0.001
1
6mer
179077-179103
0.001
1
6mer
41174-41199
0.001
1
6mer
30049-30073
0.001
1
6mer
30917-30934
0.001
1
8mer
250901-250921
0.001
0
6mer
195841-195863
0.001
1
6mer
157979-157998
0.001
2
6mer
23365-23379
0.001
0
6mer
80075-80096
0.001
Not Conserved
6mer
154794-154815
0.001
2
6mer
61676-61700
0.001
1
6mer
167575-167594
0.001
0
6mer
240516-240543
0.001
1
6mer
152913-152934
0.001
0
6mer
173807-173824
0.001
1
6mer
48790-48810
0.001
2
6mer
182848-182871
0.001
3
6mer
255694-255713
0.001
1
6mer
68855-68875
0.001
1
6mer
126390-126416
0.001
1
6mer
5567-5585
0.001
3
6mer
31416-31439
0.001
1
6mer
245771-245785
0.001
0
8mer
234713-234732
0.001
0
6mer
115879-115906
0.001
1
6mer
255302-255322
0.001
1
6mer
228162-228174
0.001
1
6mer
35799-35820
0.001
0
6mer
98431-98447
0.001
0
6mer
240004-240028
0.001
1
6mer
163799-163820
0.001
2
6mer
146312-146338
0.001
Not Conserved
6mer
200831-200853
0.001
0
6mer
45889-45904
0.001
1
6mer
35333-35354
0.001
1
6mer
31759-31786
0.001
Not Conserved
6mer
242479-242491
0.001
0
6mer
85203-85227
0.001
1
6mer
183662-183686
0.001
0
6mer
240912-240936
0.001
1
6mer
121086-121105
0.001
0
6mer
217106-217122
0.001
0
6mer
92554-92569
0.001
0
6mer
73377-73397
0.001
0
6mer
177823-177843
0.001
1
6mer
134404-134430
0.001
1
6mer
153365-153389
0.001
0
6mer
154894-154916
0.001
1
6mer
89910-89935
0.001
1
6mer
217220-217242
0.001
0
7mer
100419-100442
0.000
0
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