LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-20a-5p

ENST00000623130

or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
AC006548.28
hsa-miR-20a-5p
0.994
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-20a-5p
Sequence: uaaagugcuuauagugcagguag
MirBase ID: MIMAT0000075
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2339-2357
0.007
0
7mer
28256-28283
0.006
0
8mer
59328-59342
0.006
1
8mer
63298-63317
0.005
1
8mer
2177-2199
0.005
1
8mer+wobble
26663-26681
0.005
0
8mer
71556-71577
0.004
Not Conserved
7mer
36096-36116
0.004
3
7mer
72926-72953
0.004
0
7mer
45010-45025
0.003
1
8mer
81628-81648
0.003
1
7mer
67657-67684
0.003
Not Conserved
8mer
66882-66906
0.003
Not Conserved
7mer
51927-51948
0.002
Not Conserved
6mer
41050-41069
0.002
1
6mer
48070-48086
0.002
Not Conserved
6mer
16543-16560
0.002
1
6mer
56911-56927
0.002
1
7mer
38120-38140
0.002
1
6mer
58305-58332
0.002
1
6mer
59469-59493
0.002
1
7mer
41577-41595
0.002
0
6mer
55725-55744
0.002
0
6mer
78692-78710
0.002
Not Conserved
6mer
31062-31079
0.002
0
6mer
80180-80203
0.001
0
6mer
40396-40421
0.001
2
6mer
52732-52737
0.001
Not Conserved
6mer
24819-24824
0.001
0
6mer
72273-72293
0.001
Not Conserved
6mer
20630-20655
0.001
3
6mer
23289-23304
0.001
1
6mer
12105-12125
0.001
1
6mer
35981-36007
0.001
1
6mer
36841-36868
0.001
1
6mer
75137-75162
0.001
0
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept