LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-203a-3p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_006731
hsa-miR-203a-3p
0.922
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00015245
Biotype: transcript isomorph
Gene id: XLOC_006731
Gene Name: XLOC_006731
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
136-156
0.034
1
7mer
353-374
0.017
1
RP1-111D6.2
hsa-miR-203a-3p
0.922
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000424421
Biotype: antisense
Gene id: ENSG00000225924
Gene Name: RP1-111D6.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
235-258
0.025
4
7mer
418-435
0.012
1
6mer
439-453
0.008
4
6mer
337-355
0.006
3
XLOC_009222
hsa-miR-203a-3p
0.922
mTTBlnEmP

Gene Details
Chromosome: chr11
Transcript: TCONS_00019399
Biotype: transcript isomorph
Gene id: XLOC_009222
Gene Name: XLOC_009222
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5587-5609
0.022
0
6mer
6023-6040
0.017
0
7mer
5325-5339
0.012
0
RP11-17A1.3
hsa-miR-203a-3p
0.921
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000499625
Biotype: antisense
Gene id: ENSG00000246225
Gene Name: RP11-17A1.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1830-1848
0.018
3
9mer
1604-1620
0.017
0
6mer
1897-1907
0.008
1
6mer
857-871
0.004
2
6mer
410-429
0.003
2
6mer
965-987
0.001
0
LINC01192
hsa-miR-203a-3p
0.921
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000488287
Biotype: lincRNA
Gene id: ENSG00000241369
Gene Name: LINC01192
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
310-335
0.045
1
6mer
171-196
0.005
0
LINC01347
hsa-miR-203a-3p
0.920
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000435793
Biotype: retained_intron
Gene id: ENSG00000214837
Gene Name: LINC01347
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3-24
0.034
1
6mer
15-24
0.017
1
SLC7A11-AS1
hsa-miR-203a-3p
0.920
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000510066
Biotype: antisense
Gene id: ENSG00000250033
Gene Name: SLC7A11-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
113-131
0.033
0
6mer
659-673
0.013
6
6mer
56-69
0.005
1
XLOC_000220
hsa-miR-203a-3p
0.920
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000963
Biotype: transcript isomorph
Gene id: XLOC_000220
Gene Name: XLOC_000220
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
214-233
0.051
6
RP11-75L1.1
hsa-miR-203a-3p
0.920
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000541404
Biotype: lincRNA
Gene id: ENSG00000256582
Gene Name: RP11-75L1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
242-268
0.051
0
LINC00856
hsa-miR-203a-3p
0.919
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000624665
Biotype: lincRNA
Gene id: ENSG00000230417
Gene Name: LINC00856
UCSC graphic:
Expression:
  Cell Line Tissue Category
hMSC-BM Bone Marrow Stem/Progenitor
IMR90 Lung Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1193-1215
0.038
5
6mer
1191-1210
0.009
3
6mer
904-927
0.003
1
RP11-624L4.1
hsa-miR-203a-3p
0.919
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000560197
Biotype: lincRNA
Gene id: ENSG00000259345
Gene Name: RP11-624L4.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1200-1217
0.043
1
6mer
289-298
0.007
2
LINC01128
hsa-miR-203a-3p
0.918
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_047525.1
Biotype: lincRNA
Gene id: NR_047525.1 (gene)
Gene Name: LINC01128
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
6410-6434
0.045
1
6mer
5509-5521
0.004
1
6mer
2885-2904
0.001
0
LOC284581
hsa-miR-203a-3p
0.918
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_046097.1
Biotype: lincRNA
Gene id: NR_046097.1 (gene)
Gene Name: LOC284581
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
1992-2011
0.016
1
6mer
686-703
0.013
1
6mer
204-220
0.009
0
7mer
1336-1361
0.006
0
6mer
2403-2427
0.006
0
RP11-784B15.1
hsa-miR-203a-3p
0.917
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584482
Biotype: lincRNA
Gene id: ENSG00000264587
Gene Name: RP11-784B15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36-49
0.037
4
6mer
255-265
0.008
3
6mer
680-695
0.005
1
LINC01189
hsa-miR-203a-3p
0.917
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000428440
Biotype: lincRNA
Gene id: ENSG00000232827
Gene Name: LINC01189
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2948-2964
0.028
0
6mer
262-273
0.008
0
6mer
2295-2311
0.008
1
6mer
2340-2358
0.006
1
XLOC_003250
hsa-miR-203a-3p
0.917
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006657
Biotype: transcript isomorph
Gene id: XLOC_003250
Gene Name: XLOC_003250
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
697-721
0.032
1
7mer
685-696
0.018
1
RP11-431M7.3
hsa-miR-203a-3p
0.916
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000499292
Biotype: antisense
Gene id: ENSG00000247193
Gene Name: RP11-431M7.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1407-1427
0.036
1
7mer
646-668
0.007
2
6mer
761-783
0.004
2
6mer
631-644
0.003
0
UG0898H09
hsa-miR-203a-3p
0.914
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000623646
Biotype: lincRNA
Gene id: ENSG00000274956
Gene Name: UG0898H09
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
5865-5882
0.012
1
7mer
6395-6417
0.011
2
6mer
6822-6843
0.010
5
6mer
740-764
0.004
1
7mer
4289-4297
0.004
1
7mer
4887-4902
0.003
Not Conserved
7mer
5694-5710
0.003
1
6mer
5166-5185
0.001
1
6mer
4301-4316
0.001
1
RP11-266O8.1
hsa-miR-203a-3p
0.913
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000556519
Biotype: lincRNA
Gene id: ENSG00000257060
Gene Name: RP11-266O8.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
890-907
0.025
0
8mer
1148-1157
0.019
1
6mer
940-954
0.005
1
SOX2-OT
hsa-miR-203a-3p
0.912
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000493116
Biotype: sense_overlapping
Gene id: ENSG00000242808
Gene Name: SOX2-OT
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
53-79
0.049
12
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept