LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-19b-3p

ENST00000623644

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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-19b-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-19b-3p
Sequence: ugugcaaauccaugcaaaacuga
MirBase ID: MIMAT0000074
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
127154-127167
0.014
13
9mer
244476-244488
0.014
0
9mer
238835-238851
0.010
1
9mer
58990-59010
0.010
1
8mer
31671-31683
0.008
1
8mer
130483-130510
0.007
1
8mer
63115-63122
0.007
0
7mer
194270-194287
0.007
2
8mer
37184-37194
0.006
0
7mer
210050-210074
0.006
5
7mer
257082-257108
0.006
1
7mer
72783-72788
0.006
0
7mer
50427-50432
0.005
0
7mer
158540-158562
0.005
2
8mer
107162-107184
0.004
1
7mer
39476-39499
0.004
0
7mer
33769-33782
0.004
0
7mer
139248-139272
0.004
1
7mer
139580-139605
0.003
2
7mer
228417-228439
0.003
1
7mer
21878-21897
0.003
4
6mer
163305-163329
0.003
5
7mer
145213-145235
0.003
1
7mer
17385-17398
0.003
0
6mer
91629-91649
0.002
1
6mer
1055-1074
0.002
1
6mer
162423-162443
0.002
2
6mer
119075-119100
0.002
9
7mer
185933-185956
0.002
0
6mer
248201-248213
0.002
0
6mer
105974-105990
0.002
0
6mer
83463-83480
0.002
2
6mer
54998-55006
0.002
0
6mer
175613-175630
0.002
Not Conserved
6mer
204540-204544
0.002
2
6mer
145967-145983
0.002
0
6mer
235868-235878
0.002
1
6mer
176883-176899
0.002
3
6mer
52723-52746
0.002
0
6mer
198353-198377
0.002
1
6mer
223996-224009
0.002
0
6mer
246451-246470
0.001
0
6mer
196747-196774
0.001
1
6mer
237241-237257
0.001
1
6mer
107742-107768
0.001
1
6mer
192056-192072
0.001
1
6mer
29624-29633
0.001
1
6mer
222408-222429
0.001
0
6mer
69433-69447
0.001
1
6mer
143659-143682
0.001
1
6mer
129563-129585
0.001
1
6mer
11857-11873
0.001
0
6mer
191551-191570
0.001
0
6mer
150644-150648
0.001
2
6mer
211578-211598
0.001
0
6mer
22145-22160
0.001
1
6mer
121726-121736
0.001
1
6mer
77683-77707
0.001
0
6mer
218040-218059
0.001
1
6mer
193495-193511
0.001
0
6mer
230872-230899
0.001
0
6mer
89874-89898
0.001
1
6mer
141315-141336
0.001
2
6mer
103002-103023
0.001
1
6mer
205325-205350
0.001
1
6mer
103631-103655
0.001
0
6mer
16948-16960
0.001
1
6mer
119873-119892
0.001
1
6mer
85954-85973
0.001
0
6mer
50481-50497
0.001
0
6mer
261892-261913
0.001
1
6mer
174553-174566
0.001
0
6mer
235914-235918
0.001
4
6mer
75096-75117
0.001
1
6mer
12049-12072
0.001
0
6mer
235949-235953
0.001
0
6mer
69516-69527
0.001
Not Conserved
6mer
91699-91703
0.001
0
6mer
199004-199023
0.001
Not Conserved
6mer
235979-235983
0.001
0
6mer
235949-235963
0.001
Not Conserved
6mer
235874-235886
0.000
2
6mer
107764-107783
0.000
2
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