LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-19b-3p

ENST00000597346

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Gene
miRNA
Score
DIANA Links
KCNQ1OT1
hsa-miR-19b-3p
0.988
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-19b-3p
Sequence: ugugcaaauccaugcaaaacuga
MirBase ID: MIMAT0000074
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
7941-7952
0.006
1
7mer
78892-78919
0.006
0
8mer
80858-80880
0.005
1
7mer
17744-17763
0.005
1
7mer
55156-55179
0.004
1
7mer
46569-46594
0.003
0
7mer
16330-16352
0.003
0
6mer
342-349
0.003
Not Conserved
6mer
280-299
0.003
0
6mer
1141-1158
0.002
1
7mer
65458-65483
0.002
1
6mer
8506-8510
0.002
1
6mer
26317-26342
0.002
0
6mer
20293-20314
0.002
0
7mer
84327-84343
0.002
1
6mer
67037-67063
0.002
1
6mer
62482-62505
0.002
1
6mer
51608-51625
0.002
1
6mer
82284-82296
0.002
1
6mer
30694-30707
0.002
0
6mer
68573-68598
0.001
3
6mer
3965-3991
0.001
1
6mer
59862-59875
0.001
2
6mer
70790-70799
0.001
1
6mer
76340-76364
0.001
0
6mer
57555-57570
0.001
1
6mer
67768-67772
0.001
1
6mer
78434-78455
0.001
1
6mer
4641-4652
0.001
1
6mer
6017-6024
0.001
0
6mer
57161-57180
0.001
2
6mer
87015-87031
0.001
1
6mer
63086-63108
0.001
0
6mer
74672-74696
0.001
1
6mer
77135-77159
0.001
0
6mer
43096-43117
0.001
1
6mer
15082-15102
0.001
0
6mer
59597-59618
0.001
1
6mer
48671-48687
0.001
0
6mer
54655-54681
0.001
0
6mer
82792-82814
0.001
1
6mer
59524-59538
0.001
0
6mer
74646-74672
0.000
1
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