LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
AC012354.6
hsa-miR-181a-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000425325
Biotype: lincRNA
Gene id: ENSG00000225156
Gene Name: AC012354.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2248-2265
0.021
1
9mer
301-324
0.016
Not Conserved
6mer
2401-2423
0.004
2
6mer
1849-1868
0.002
1
RP11-410E4.1
hsa-miR-181a-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000564407
Biotype: lincRNA
Gene id: ENSG00000259915
Gene Name: RP11-410E4.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
412-435
0.024
1
7mer
1403-1411
0.019
4
XLOC_001451
hsa-miR-181a-5p
0.883
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00002884
Biotype: transcript isomorph
Gene id: XLOC_001451
Gene Name: XLOC_001451
UCSC graphic: -
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2248-2265
0.021
1
9mer
301-324
0.016
Not Conserved
6mer
2401-2423
0.004
2
6mer
1849-1868
0.002
1
XLOC_011602
hsa-miR-181a-5p
0.882
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023823
Biotype: transcript isomorph
Gene id: XLOC_011602
Gene Name: XLOC_011602
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
- Breast Normal/Primary
- Prostate Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
200-218
0.033
1
6mer
102-122
0.010
3
XLOC_011448
hsa-miR-181a-5p
0.882
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023648
Biotype: transcript isomorph
Gene id: XLOC_011448
Gene Name: XLOC_011448
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
8345-8361
0.024
7
8mer
9461-9484
0.005
1
6mer
7502-7520
0.004
7
6mer
9475-9489
0.004
2
7mer
8149-8173
0.003
3
6mer
7905-7922
0.002
1
6mer
7452-7477
0.001
7
CTA-292E10.9
hsa-miR-181a-5p
0.882
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3807-3826
0.014
7
7mer
4739-4760
0.005
4
7mer
2178-2203
0.004
2
6mer
2651-2669
0.004
6
6mer
24812-24835
0.002
1
7mer
23403-23425
0.002
0
6mer
5192-5218
0.002
2
6mer
1978-1999
0.002
2
6mer
13745-13765
0.002
1
7mer
4821-4846
0.002
2
6mer
18467-18478
0.002
2
6mer
12029-12052
0.001
1
6mer
1637-1656
0.001
1
AC079779.5
hsa-miR-181a-5p
0.881
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000588334
Biotype: lincRNA
Gene id: ENSG00000235779
Gene Name: AC079779.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
176-196
0.043
2
LINC00158
hsa-miR-181a-5p
0.881
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000439840
Biotype: lincRNA
Gene id: ENSG00000185433
Gene Name: LINC00158
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
426-446
0.043
1
LINC00892
hsa-miR-181a-5p
0.881
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000427517
Biotype: retained_intron
Gene id: ENSG00000233093
Gene Name: LINC00892
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1413-1438
0.024
5
8mer
1082-1108
0.012
2
6mer
187-203
0.007
1
RP3-329A5.8
hsa-miR-181a-5p
0.879
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000605896
Biotype: lincRNA
Gene id: ENSG00000272374
Gene Name: RP3-329A5.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
219-238
0.033
1
7mer
3212-3238
0.006
1
8mer
1578-1604
0.004
0
RP11-351I21.11
hsa-miR-181a-5p
0.879
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000602981
Biotype: lincRNA
Gene id: ENSG00000270074
Gene Name: RP11-351I21.11
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
201-226
0.029
0
7mer
1146-1167
0.011
0
6mer
849-871
0.003
Not Conserved
RP11-248N22.1
hsa-miR-181a-5p
0.879
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000511346
Biotype: lincRNA
Gene id: ENSG00000250957
Gene Name: RP11-248N22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
191-209
0.028
1
7mer
1083-1100
0.015
6
AC079779.5
hsa-miR-181a-5p
0.877
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000585703
Biotype: lincRNA
Gene id: ENSG00000235779
Gene Name: AC079779.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
196-216
0.043
2
RP11-76I14.1
hsa-miR-181a-5p
0.877
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000412112
Biotype: lincRNA
Gene id: ENSG00000256637
Gene Name: RP11-76I14.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
11-27
0.043
7
XLOC_007352
hsa-miR-181a-5p
0.877
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015976
Biotype: transcript isomorph
Gene id: XLOC_007352
Gene Name: XLOC_007352
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
33-54
0.027
1
7mer
3105-3126
0.009
1
6mer
2839-2857
0.004
1
6mer
2091-2116
0.001
0
6mer
2248-2267
0.001
Not Conserved
7mer
2117-2144
0.001
0
RP11-1049A21.2
hsa-miR-181a-5p
0.875
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547942
Biotype: antisense
Gene id: ENSG00000257824
Gene Name: RP11-1049A21.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
25-44
0.028
9
9mer
77-103
0.014
0
RP11-8L2.1
hsa-miR-181a-5p
0.874
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000508406
Biotype: lincRNA
Gene id: ENSG00000250546
Gene Name: RP11-8L2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
151-170
0.023
2
7mer
1837-1861
0.009
1
6mer
2753-2779
0.006
1
6mer
730-748
0.003
1
6mer
1062-1080
0.002
1
AC079779.5
hsa-miR-181a-5p
0.873
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000590255
Biotype: lincRNA
Gene id: ENSG00000235779
Gene Name: AC079779.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
198-218
0.042
2
ATP1A1OS
hsa-miR-181a-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: NR_024124.2
Biotype: antisense
Gene id: NR_024124.2 (gene)
Gene Name: ATP1A1OS
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
253-276
0.042
3
XLOC_005493
hsa-miR-181a-5p
0.872
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00011982
Biotype: transcript isomorph
Gene id: XLOC_005493
Gene Name: XLOC_005493
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
282-305
0.042
3
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