LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
AC006262.5
hsa-miR-181a-5p
0.913
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000598518
Biotype: lincRNA
Gene id: ENSG00000268621
Gene Name: AC006262.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
477-493
0.049
0
RP11-118A3.1
hsa-miR-181a-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000553211
Biotype: lincRNA
Gene id: ENSG00000258331
Gene Name: RP11-118A3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
148-164
0.019
1
7mer
801-821
0.013
1
6mer
210-233
0.010
6
6mer
295-321
0.007
5
RP11-386J22.3
hsa-miR-181a-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000622201
Biotype: sense_intronic
Gene id: ENSG00000274421
Gene Name: RP11-386J22.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
697-715
0.043
1
6mer
818-845
0.004
Not Conserved
6mer
1023-1044
0.002
Not Conserved
RP11-101E7.2
hsa-miR-181a-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000568410
Biotype: antisense
Gene id: ENSG00000260277
Gene Name: RP11-101E7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
62-85
0.031
2
8mer
310-334
0.018
0
RP1-111D6.3
hsa-miR-181a-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000443992
Biotype: lincRNA
Gene id: ENSG00000228408
Gene Name: RP1-111D6.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
332-351
0.049
4
XLOC_014120
hsa-miR-181a-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028762
Biotype: transcript isomorph
Gene id: XLOC_014120
Gene Name: XLOC_014120
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Heart Normal/Primary
- Lung Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
54-72
0.047
0
6mer
1830-1854
0.002
Not Conserved
LINC00163
hsa-miR-181a-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000434081
Biotype: lincRNA
Gene id: ENSG00000234880
Gene Name: LINC00163
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
56-74
0.047
0
6mer
1832-1856
0.002
Not Conserved
XLOC_007648
hsa-miR-181a-5p
0.909
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015794
Biotype: transcript isomorph
Gene id: XLOC_007648
Gene Name: XLOC_007648
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
38-62
0.048
1
XLOC_011021
hsa-miR-181a-5p
0.909
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022743
Biotype: transcript isomorph
Gene id: XLOC_011021
Gene Name: XLOC_011021
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
950-971
0.048
2
RP11-96K19.4
hsa-miR-181a-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000562952
Biotype: sense_overlapping
Gene id: ENSG00000261654
Gene Name: RP11-96K19.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
979-996
0.022
0
7mer
3090-3103
0.015
1
6mer
3524-3547
0.008
1
6mer
4585-4608
0.003
0
6mer
3372-3388
0.001
Not Conserved
RP11-67H2.1
hsa-miR-181a-5p
0.907
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000521500
Biotype: lincRNA
Gene id: ENSG00000253207
Gene Name: RP11-67H2.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1400-1413
0.015
0
8mer
172-193
0.014
2
7mer
967-984
0.011
0
6mer
1530-1542
0.008
1
RP3-412A9.17
hsa-miR-181a-5p
0.907
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623789
Biotype: sense_overlapping
Gene id: ENSG00000278920
Gene Name: RP3-412A9.17
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
13427-13442
0.011
1
6mer
16666-16691
0.006
0
6mer
341-363
0.005
0
7mer
12820-12844
0.005
0
6mer
16363-16390
0.005
0
6mer
4094-4110
0.004
7
7mer
5511-5532
0.004
2
7mer
1363-1390
0.002
3
6mer
11789-11813
0.001
1
6mer
3388-3408
0.001
0
7mer
4094-4116
0.001
1
6mer
4978-5004
0.001
1
AC114776.3
hsa-miR-181a-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000414159
Biotype: lincRNA
Gene id: ENSG00000235881
Gene Name: AC114776.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3061-3083
0.027
1
6mer
4333-4358
0.011
0
7mer
1832-1848
0.009
1
AC002480.2
hsa-miR-181a-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000414116
Biotype: lincRNA
Gene id: ENSG00000238033
Gene Name: AC002480.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
95-116
0.042
1
6mer
60-86
0.006
1
RP11-2E11.5
hsa-miR-181a-5p
0.905
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000562524
Biotype: lincRNA
Gene id: ENSG00000259920
Gene Name: RP11-2E11.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2738-2753
0.027
2
7mer
2629-2651
0.012
3
6mer
2197-2220
0.003
1
6mer
400-423
0.003
0
6mer
1313-1336
0.002
2
RP11-822E23.8
hsa-miR-181a-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000468381
Biotype: processed_transcript
Gene id: ENSG00000272780
Gene Name: RP11-822E23.8
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
93-120
0.040
0
7mer
169-193
0.007
0
RP11-554D14.6
hsa-miR-181a-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000547452
Biotype: lincRNA
Gene id: ENSG00000257398
Gene Name: RP11-554D14.6
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
35-48
0.032
0
7mer
647-671
0.015
0
CTA-929C8.9
hsa-miR-181a-5p
0.903
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624278
Biotype: sense_intronic
Gene id: ENSG00000279185
Gene Name: CTA-929C8.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
8908-8927
0.017
1
9mer
24034-24051
0.010
1
7mer
3330-3354
0.005
1
7mer
6877-6891
0.004
1
6mer
830-847
0.003
1
6mer
8373-8383
0.002
1
6mer
3497-3523
0.002
1
6mer
10006-10029
0.002
1
6mer
13012-13034
0.002
0
6mer
21305-21325
0.002
1
LINC00486
hsa-miR-181a-5p
0.902
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000424364
Biotype: lincRNA
Gene id: ENSG00000230876
Gene Name: LINC00486
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
344-360
0.047
4
AC004947.2
hsa-miR-181a-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000420912
Biotype: lincRNA
Gene id: ENSG00000233760
Gene Name: AC004947.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
204-221
0.024
1
7mer
2715-2734
0.017
Not Conserved
7mer
1832-1856
0.004
1
6mer
1231-1247
0.003
2
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