LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-181a-5p


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Gene
miRNA
Score
DIANA Links
AF129075.5
hsa-miR-181a-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000457162
Biotype: sense_intronic
Gene id: ENSG00000231125
Gene Name: AF129075.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
166-186
0.059
3
6mer
272-293
0.004
1
XLOC_014420
hsa-miR-181a-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: chr22
Transcript: TCONS_00029355
Biotype: transcript isomorph
Gene id: XLOC_014420
Gene Name: XLOC_014420
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
716-736
0.018
0
8mer
1477-1494
0.014
1
8mer
1357-1379
0.012
1
8mer
1122-1138
0.007
2
7mer
1537-1563
0.007
0
7mer
1153-1173
0.005
1
RP11-1134I14.8
hsa-miR-181a-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000528139
Biotype: lincRNA
Gene id: ENSG00000255366
Gene Name: RP11-1134I14.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1725-1741
0.028
1
8mer
2396-2417
0.019
0
6mer
1921-1948
0.009
5
7mer
1796-1815
0.007
1
AC000036.4
hsa-miR-181a-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000449652
Biotype: antisense
Gene id: ENSG00000225929
Gene Name: AC000036.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
722-742
0.018
0
8mer
1483-1500
0.014
1
8mer
1363-1385
0.012
1
7mer
1543-1569
0.007
0
8mer
1128-1144
0.007
2
7mer
1159-1179
0.005
1
XLOC_008249
hsa-miR-181a-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017554
Biotype: transcript isomorph
Gene id: XLOC_008249
Gene Name: XLOC_008249
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Testes Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
29-48
0.010
Not Conserved
7mer
93-112
0.007
Not Conserved
6mer
49-69
0.004
Not Conserved
6mer
74-93
0.004
Not Conserved
6mer
188-206
0.004
Not Conserved
6mer
113-138
0.004
Not Conserved
6mer
13-38
0.004
Not Conserved
6mer
239-257
0.004
Not Conserved
6mer
260-280
0.004
Not Conserved
6mer
207-232
0.004
Not Conserved
6mer
145-163
0.004
Not Conserved
6mer
224-247
0.004
Not Conserved
6mer
283-301
0.003
Not Conserved
RAP2C-AS1
hsa-miR-181a-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000441399
Biotype: antisense
Gene id: ENSG00000232160
Gene Name: RAP2C-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
399-414
0.029
2
9mer
1189-1208
0.016
0
8mer
983-1007
0.014
0
6mer
1533-1557
0.002
0
6mer
1008-1029
0.001
Not Conserved
XLOC_010191
hsa-miR-181a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020911
Biotype: transcript isomorph
Gene id: XLOC_010191
Gene Name: XLOC_010191
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Lymph Node Normal/Primary
- Placenta Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
13-26
0.061
0
LINC01002
hsa-miR-181a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000618269
Biotype: lincRNA
Gene id: ENSG00000206082
Gene Name: LINC01002
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
702-723
0.061
1
RP11-45I20.1
hsa-miR-181a-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000456728
Biotype: lincRNA
Gene id: ENSG00000235149
Gene Name: RP11-45I20.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
40-60
0.061
1
XLOC_010279
hsa-miR-181a-5p
0.954
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020261
Biotype: transcript isomorph
Gene id: XLOC_010279
Gene Name: XLOC_010279
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
6mer
618-633
0.015
0
6mer
2282-2298
0.015
0
6mer
859-882
0.009
0
6mer
1654-1679
0.008
0
6mer
800-825
0.008
0
6mer
1566-1591
0.005
0
RP11-334J6.7
hsa-miR-181a-5p
0.953
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000321081
Biotype: pseudogene
Gene id: ENSG00000176868
Gene Name: RP11-334J6.7
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
273-294
0.038
1
8mer
186-213
0.021
Not Conserved
LINC00665
hsa-miR-181a-5p
0.953
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000412740
Biotype: lincRNA
Gene id: ENSG00000232677
Gene Name: LINC00665
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
55-73
0.060
1
LINC00506
hsa-miR-181a-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: NR_047469.1
Biotype: lincRNA
Gene id: NR_047469.1 (gene)
Gene Name: LINC00506
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
877-895
0.024
0
6mer
4258-4276
0.011
1
8mer
997-1017
0.010
0
9mer
2367-2383
0.006
0
6mer
1285-1310
0.003
0
7mer
3006-3029
0.003
Not Conserved
7mer
2139-2158
0.003
Not Conserved
6mer
1412-1431
0.001
0
RP11-147L13.14
hsa-miR-181a-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000612725
Biotype: lincRNA
Gene id: ENSG00000278740
Gene Name: RP11-147L13.14
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
229-247
0.059
0
RP11-314B1.2
hsa-miR-181a-5p
0.951
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000609089
Biotype: lincRNA
Gene id: ENSG00000273301
Gene Name: RP11-314B1.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4780-4804
0.038
3
6mer
4445-4471
0.007
7
6mer
421-425
0.006
3
7mer
3318-3340
0.004
0
6mer
1672-1687
0.003
3
6mer
3753-3778
0.002
4
AC078941.1
hsa-miR-181a-5p
0.950
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000433133
Biotype: lincRNA
Gene id: ENSG00000236780
Gene Name: AC078941.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
43-69
0.038
1
7mer
1279-1301
0.010
6
6mer
1310-1336
0.005
5
6mer
886-906
0.004
2
6mer
731-756
0.003
2
RP11-153I24.4
hsa-miR-181a-5p
0.949
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000619612
Biotype: sense_intronic
Gene id: ENSG00000277246
Gene Name: RP11-153I24.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
367-385
0.053
1
6mer
344-366
0.006
1
ZNRD1-AS1
hsa-miR-181a-5p
0.948
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000444051
Biotype: antisense
Gene id: ENSG00000204623
Gene Name: ZNRD1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
290-316
0.040
1
6mer
7016-7038
0.004
1
6mer
966-991
0.004
0
6mer
767-792
0.004
0
6mer
2650-2654
0.003
0
6mer
2058-2072
0.003
0
6mer
4245-4270
0.001
Not Conserved
CTA-796E4.5
hsa-miR-181a-5p
0.948
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624243
Biotype: lincRNA
Gene id: ENSG00000280065
Gene Name: CTA-796E4.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2365-2382
0.009
1
8mer
7387-7404
0.005
1
7mer
29908-29930
0.005
1
7mer
1966-1983
0.004
1
6mer
24139-24161
0.002
4
6mer
25009-25035
0.002
2
7mer
13980-14004
0.002
0
7mer
11284-11310
0.002
0
7mer
22996-23020
0.002
1
6mer
3357-3373
0.002
1
6mer
27768-27795
0.002
1
7mer
24300-24319
0.002
0
6mer
20196-20216
0.002
1
6mer
3861-3879
0.002
1
6mer
21646-21673
0.002
0
6mer
25310-25314
0.002
2
6mer
26846-26867
0.002
2
6mer
15075-15099
0.002
1
6mer
7562-7579
0.001
1
6mer
2178-2194
0.001
1
6mer
25129-25147
0.001
2
6mer
9568-9578
0.001
1
6mer
16566-16590
0.001
0
CTD-3075F15.1
hsa-miR-181a-5p
0.947
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000618460
Biotype: lincRNA
Gene id: ENSG00000273565
Gene Name: CTD-3075F15.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-181a-5p
Sequence: aacauucaacgcugucggugagu
MirBase ID: MIMAT0000256
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
375-396
0.025
1
7mer
313-332
0.019
4
7mer
242-257
0.014
5
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