LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-17-5p

ENST00000623130

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Gene
miRNA
Score
DIANA Links
AC006548.28
hsa-miR-17-5p
0.986
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-17-5p
Sequence: caaagugcuuacagugcagguag
MirBase ID: MIMAT0000070
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2339-2357
0.007
0
6mer
326-346
0.006
1
8mer
59328-59342
0.006
1
8mer
2177-2199
0.006
1
9mer
63298-63317
0.005
1
8mer
71556-71577
0.004
Not Conserved
6mer
112-129
0.004
1
9mer
81628-81648
0.003
1
9mer
66882-66906
0.003
Not Conserved
8mer
41577-41595
0.003
0
6mer
28257-28283
0.002
0
6mer
36097-36116
0.002
4
7mer
24819-24824
0.002
0
7mer
51927-51948
0.002
Not Conserved
6mer
41050-41069
0.002
1
6mer
73712-73733
0.002
1
6mer
16543-16560
0.002
1
6mer
55725-55744
0.002
0
6mer
15921-15944
0.002
3
6mer
59469-59493
0.002
1
6mer
72927-72953
0.002
0
6mer
67658-67684
0.002
0
6mer
68803-68818
0.001
0
6mer
16952-16965
0.001
0
6mer
51565-51585
0.001
Not Conserved
6mer
55343-55361
0.001
0
7mer
36841-36868
0.001
1
6mer
23289-23304
0.001
1
7mer
75137-75162
0.001
0
6mer
38121-38140
0.001
1
6mer
12105-12125
0.001
1
6mer
35981-36007
0.001
1
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