LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-15a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
TRAF3IP2-AS1
hsa-miR-15a-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000449449
Biotype: antisense
Gene id: ENSG00000231889
Gene Name: TRAF3IP2-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
228-252
0.056
6
6mer
228-249
0.007
4
FGF14-AS1
hsa-miR-15a-5p
0.961
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000451630
Biotype: antisense
Gene id: ENSG00000234445
Gene Name: FGF14-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-162
0.063
1
RP11-574K11.29
hsa-miR-15a-5p
0.960
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000415917
Biotype: lincRNA
Gene id: ENSG00000272140
Gene Name: RP11-574K11.29
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
815-831
0.026
0
7mer
194-213
0.024
1
6mer
197-213
0.013
1
RP11-1197K16.2
hsa-miR-15a-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000574647
Biotype: antisense
Gene id: ENSG00000262339
Gene Name: RP11-1197K16.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
215-236
0.057
0
6mer
31-50
0.005
0
RP11-436F23.1
hsa-miR-15a-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000502455
Biotype: antisense
Gene id: ENSG00000249330
Gene Name: RP11-436F23.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
502-518
0.036
4
6mer
454-473
0.010
6
7mer
292-309
0.009
1
6mer
172-193
0.005
3
6mer
118-135
0.002
1
AC022007.5
hsa-miR-15a-5p
0.959
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000437616
Biotype: lincRNA
Gene id: ENSG00000206567
Gene Name: AC022007.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
189-212
0.027
0
6mer
192-212
0.013
0
6mer
495-515
0.013
0
6mer
253-269
0.010
0
RP11-111A21.1
hsa-miR-15a-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: 14
Transcript: ENST00000556620
Biotype: lincRNA
Gene id: ENSG00000258526
Gene Name: RP11-111A21.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
355-369
0.062
1
RP11-869B15.1
hsa-miR-15a-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000598393
Biotype: lincRNA
Gene id: ENSG00000269290
Gene Name: RP11-869B15.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
16-38
0.036
0
8mer
277-295
0.026
0
MCM3AP-AS1
hsa-miR-15a-5p
0.958
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: NR_002776.3
Biotype: antisense
Gene id: NR_002776.3 (gene)
Gene Name: MCM3AP-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2170-2197
0.029
0
8mer
303-329
0.016
1
7mer
1424-1445
0.014
0
6mer
300-326
0.004
3
LINC01184
hsa-miR-15a-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000508878
Biotype: lincRNA
Gene id: ENSG00000245937
Gene Name: LINC01184
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
483-498
0.043
2
7mer
216-229
0.019
5
LINC01410
hsa-miR-15a-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000424345
Biotype: lincRNA
Gene id: ENSG00000238113
Gene Name: LINC01410
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2156-2178
0.022
0
7mer
2205-2230
0.017
0
6mer
2289-2307
0.009
0
6mer
2205-2227
0.008
0
6mer
1086-1110
0.005
0
6mer
988-1005
0.001
Not Conserved
CTD-2329C7.2
hsa-miR-15a-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000589967
Biotype: lincRNA
Gene id: ENSG00000266985
Gene Name: CTD-2329C7.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
147-169
0.060
1
6mer
1033-1056
0.002
0
MCM3AP-AS1
hsa-miR-15a-5p
0.957
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000455567
Biotype: antisense
Gene id: ENSG00000215424
Gene Name: MCM3AP-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2170-2197
0.029
0
8mer
303-329
0.016
1
7mer
1424-1445
0.014
0
6mer
300-326
0.004
3
LINC00492
hsa-miR-15a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504436
Biotype: lincRNA
Gene id: ENSG00000250958
Gene Name: LINC00492
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
19-40
0.033
1
7mer
367-383
0.028
3
FGF14-IT1
hsa-miR-15a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000607251
Biotype: sense_intronic
Gene id: ENSG00000243319
Gene Name: FGF14-IT1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1571-1591
0.028
3
7mer
1557-1567
0.026
9
7mer
1847-1863
0.007
1
RP3-500L14.2
hsa-miR-15a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000607518
Biotype: lincRNA
Gene id: ENSG00000272209
Gene Name: RP3-500L14.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
549-567
0.061
1
CTD-3239E11.2
hsa-miR-15a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000523197
Biotype: antisense
Gene id: ENSG00000253197
Gene Name: CTD-3239E11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
21-36
0.061
5
XLOC_003546
hsa-miR-15a-5p
0.956
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00007535
Biotype: transcript isomorph
Gene id: XLOC_003546
Gene Name: XLOC_003546
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3092-3108
0.047
4
7mer
2860-2877
0.009
1
6mer
230-243
0.003
1
6mer
2255-2275
0.002
0
RBAKDN
hsa-miR-15a-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000498308
Biotype: lincRNA
Gene id: ENSG00000273313
Gene Name: RBAKDN
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
104-123
0.014
5
7mer
104-120
0.013
4
7mer
105-128
0.013
4
7mer
104-126
0.011
4
7mer
90-117
0.009
2
RP11-166D19.1
hsa-miR-15a-5p
0.955
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000529823
Biotype: sense_overlapping
Gene id: ENSG00000255248
Gene Name: RP11-166D19.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2809-2827
0.056
7
6mer
2548-2567
0.003
2
6mer
2475-2494
0.002
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept