LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-15a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
XLOC_000199
hsa-miR-15a-5p
0.904
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000200
Biotype: transcript isomorph
Gene id: XLOC_000199
Gene Name: XLOC_000199
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Liver Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
532-549
0.047
1
CTA-929C8.9
hsa-miR-15a-5p
0.903
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624278
Biotype: sense_intronic
Gene id: ENSG00000279185
Gene Name: CTA-929C8.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
12133-12154
0.013
1
7mer
11287-11311
0.008
1
7mer
1247-1269
0.007
1
7mer
16140-16163
0.003
1
6mer
6314-6335
0.003
2
6mer
5381-5392
0.002
0
6mer
17441-17456
0.002
2
6mer
11057-11074
0.002
1
6mer
5159-5180
0.002
2
6mer
12551-12574
0.002
1
6mer
13618-13638
0.001
0
6mer
17893-17918
0.001
1
7mer
15480-15499
0.001
0
6mer
12561-12588
0.001
0
XLOC_006920
hsa-miR-15a-5p
0.902
mTTBlnEmP

Gene Details
Chromosome: chr8
Transcript: TCONS_00014545
Biotype: transcript isomorph
Gene id: XLOC_006920
Gene Name: XLOC_006920
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
608-623
0.029
2
7mer
740-767
0.009
1
7mer
997-1018
0.007
1
6mer
624-639
0.002
2
TINCR
hsa-miR-15a-5p
0.902
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000448587
Biotype: lincRNA
Gene id: ENSG00000223573
Gene Name: TINCR
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3382-3402
0.008
3
7mer
3380-3397
0.006
4
6mer
416-436
0.005
3
6mer
351-371
0.005
3
7mer
172-186
0.005
1
6mer
233-255
0.005
0
8mer
3544-3559
0.004
Not Conserved
6mer
500-518
0.003
1
6mer
3547-3563
0.003
2
7mer
1775-1793
0.002
Not Conserved
6mer
1933-1951
0.001
0
6mer
1671-1695
0.001
1
AC004951.6
hsa-miR-15a-5p
0.902
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000447643
Biotype: lincRNA
Gene id: ENSG00000228434
Gene Name: AC004951.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1346-1363
0.029
0
6mer
117-138
0.018
0
RP11-65D17.1
hsa-miR-15a-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000500180
Biotype: lincRNA
Gene id: ENSG00000244791
Gene Name: RP11-65D17.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
660-675
0.029
2
7mer
792-819
0.009
1
7mer
1049-1070
0.007
1
6mer
676-691
0.002
2
XLOC_003679
hsa-miR-15a-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: chr4
Transcript: TCONS_00008217
Biotype: transcript isomorph
Gene id: XLOC_003679
Gene Name: XLOC_003679
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Testes Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
193-211
0.042
1
6mer
380-393
0.005
2
RP4-742J24.2
hsa-miR-15a-5p
0.901
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000439529
Biotype: antisense
Gene id: ENSG00000236526
Gene Name: RP4-742J24.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1553-1576
0.021
10
8mer
1655-1672
0.012
5
7mer
1538-1562
0.006
2
7mer
1535-1555
0.005
2
6mer
1129-1151
0.004
2
MAGI2-AS3
hsa-miR-15a-5p
0.899
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: ENST00000426835
Biotype: antisense
Gene id: ENSG00000234456
Gene Name: MAGI2-AS3
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
341-360
0.031
1
7mer
237-253
0.012
0
6mer
441-453
0.003
0
NUTM2A-AS1
hsa-miR-15a-5p
0.899
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000446751
Biotype: antisense
Gene id: ENSG00000223482
Gene Name: NUTM2A-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
779-798
0.036
0
7mer
2003-2021
0.009
0
6mer
2302-2321
0.002
Not Conserved
DKFZP434L187
hsa-miR-15a-5p
0.898
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000455163
Biotype: lincRNA
Gene id: ENSG00000225930
Gene Name: DKFZP434L187
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
93-112
0.030
1
6mer
93-110
0.017
1
LOC90784
hsa-miR-15a-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: NR_026984.1
Biotype: sense
Gene id: NR_026984.1 (gene)
Gene Name: LOC90784
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
531-549
0.045
3
6mer
1177-1195
0.001
0
XLOC_000490
hsa-miR-15a-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00001218
Biotype: transcript isomorph
Gene id: XLOC_000490
Gene Name: XLOC_000490
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
472-491
0.041
1
7mer
186-209
0.005
1
RP11-554D20.2
hsa-miR-15a-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 15
Transcript: ENST00000616822
Biotype: sense_intronic
Gene id: ENSG00000273792
Gene Name: RP11-554D20.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1259-1277
0.046
0
RP11-199F11.2
hsa-miR-15a-5p
0.897
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000571370
Biotype: sense_intronic
Gene id: ENSG00000262251
Gene Name: RP11-199F11.2
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
8-34
0.046
2
C1orf132
hsa-miR-15a-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000487977
Biotype: lincRNA
Gene id: ENSG00000203709
Gene Name: C1orf132
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
2869-2889
0.012
6
7mer
2872-2889
0.012
7
6mer
2426-2443
0.007
6
6mer
2875-2895
0.005
5
6mer
189-211
0.004
2
7mer
1361-1369
0.002
0
6mer
1029-1049
0.001
1
6mer
2350-2368
0.001
1
RP11-312J18.6
hsa-miR-15a-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 1
Transcript: ENST00000427339
Biotype: lincRNA
Gene id: ENSG00000232188
Gene Name: RP11-312J18.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
382-399
0.046
0
CTC-265F19.1
hsa-miR-15a-5p
0.896
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000587894
Biotype: sense_intronic
Gene id: ENSG00000267749
Gene Name: CTC-265F19.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
257-279
0.037
1
6mer
793-813
0.009
1
XLOC_010236
hsa-miR-15a-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020260
Biotype: transcript isomorph
Gene id: XLOC_010236
Gene Name: XLOC_010236
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
495-516
0.034
1
7mer
441-458
0.012
3
XLOC_000561
hsa-miR-15a-5p
0.895
mTTBlnEmP

Gene Details
Chromosome: chr1
Transcript: TCONS_00000391
Biotype: transcript isomorph
Gene id: XLOC_000561
Gene Name: XLOC_000561
UCSC graphic: -
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1001-1018
0.020
2
8mer
120-138
0.015
1
7mer
1094-1116
0.004
1
6mer
120-135
0.004
1
6mer
1135-1153
0.002
3
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept