LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-15a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
CTD-2154I11.2
hsa-miR-15a-5p
0.914
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000513235
Biotype: antisense
Gene id: ENSG00000250240
Gene Name: CTD-2154I11.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
43-65
0.039
0
6mer
265-284
0.007
6
6mer
385-398
0.004
4
RP1-168P16.1
hsa-miR-15a-5p
0.914
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000567166
Biotype: sense_intronic
Gene id: ENSG00000261692
Gene Name: RP1-168P16.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
87-113
0.022
2
7mer
143-160
0.012
1
6mer
6-17
0.008
1
6mer
274-286
0.007
2
RP1-302G2.5
hsa-miR-15a-5p
0.912
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000576476
Biotype: lincRNA
Gene id: ENSG00000262179
Gene Name: RP1-302G2.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
94-111
0.023
9
7mer
61-83
0.014
5
7mer
75-96
0.009
1
6mer
61-81
0.004
2
TINCR
hsa-miR-15a-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_027064.1
Biotype: lincRNA
Gene id: NR_027064.1 (gene)
Gene Name: TINCR
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
3382-3402
0.008
3
7mer
3380-3397
0.007
4
6mer
416-436
0.006
3
7mer
172-186
0.005
1
6mer
351-371
0.005
3
6mer
233-255
0.005
0
6mer
500-518
0.004
1
8mer
3544-3559
0.003
Not Conserved
6mer
3547-3563
0.003
2
7mer
1775-1793
0.002
Not Conserved
6mer
1933-1951
0.001
0
6mer
1671-1695
0.001
1
LINC00284
hsa-miR-15a-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000423211
Biotype: lincRNA
Gene id: ENSG00000233725
Gene Name: LINC00284
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
582-602
0.033
3
7mer
1005-1030
0.008
1
8mer
1954-1972
0.005
0
7mer
1954-1969
0.002
0
6mer
1899-1913
0.001
Not Conserved
AC007392.3
hsa-miR-15a-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 2
Transcript: ENST00000412944
Biotype: lincRNA
Gene id: ENSG00000232046
Gene Name: AC007392.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
465-486
0.017
6
7mer
426-443
0.016
5
6mer
442-463
0.016
9
RP11-114G22.1
hsa-miR-15a-5p
0.911
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000540895
Biotype: lincRNA
Gene id: ENSG00000256995
Gene Name: RP11-114G22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1876-1898
0.043
0
6mer
123-139
0.005
0
XLOC_007930
hsa-miR-15a-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00017140
Biotype: transcript isomorph
Gene id: XLOC_007930
Gene Name: XLOC_007930
UCSC graphic: -
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Placenta Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1371-1393
0.049
2
XLOC_009645
hsa-miR-15a-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020306
Biotype: transcript isomorph
Gene id: XLOC_009645
Gene Name: XLOC_009645
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1749-1769
0.046
0
6mer
1286-1312
0.003
Not Conserved
RP1-302G2.5
hsa-miR-15a-5p
0.910
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000573382
Biotype: lincRNA
Gene id: ENSG00000262179
Gene Name: RP1-302G2.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
91-108
0.024
9
7mer
58-80
0.011
5
7mer
72-93
0.010
1
6mer
58-78
0.003
2
RP11-120D5.1
hsa-miR-15a-5p
0.909
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000608176
Biotype: lincRNA
Gene id: ENSG00000234129
Gene Name: RP11-120D5.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
A549 Lung Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1340-1356
0.023
1
7mer
374-399
0.021
Not Conserved
6mer
1034-1049
0.004
3
SCAMP1-AS1
hsa-miR-15a-5p
0.909
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000421004
Biotype: lincRNA
Gene id: ENSG00000245556
Gene Name: SCAMP1-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1177-1199
0.042
2
6mer
273-297
0.006
4
RP11-588H23.3
hsa-miR-15a-5p
0.908
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548687
Biotype: antisense
Gene id: ENSG00000258168
Gene Name: RP11-588H23.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HepG2 Liver Cancer/Malignant


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
4751-4772
0.027
3
8mer
366-386
0.008
1
7mer
1095-1116
0.005
1
6mer
284-304
0.003
1
6mer
5618-5638
0.003
0
6mer
2421-2445
0.002
3
LINC00837
hsa-miR-15a-5p
0.907
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000622423
Biotype: lincRNA
Gene id: ENSG00000235824
Gene Name: LINC00837
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
372-387
0.048
0
RP11-78O22.1
hsa-miR-15a-5p
0.907
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000470739
Biotype: lincRNA
Gene id: ENSG00000239661
Gene Name: RP11-78O22.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36-60
0.048
0
MIR4534
hsa-miR-15a-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
32458-32481
0.007
1
7mer
35245-35263
0.004
6
6mer
19627-19642
0.003
8
7mer
31048-31071
0.002
0
6mer
25155-25177
0.002
9
7mer
24944-24959
0.002
1
7mer
32082-32099
0.002
Not Conserved
6mer
28639-28654
0.002
0
6mer
30218-30241
0.002
3
6mer
4669-4681
0.002
1
6mer
20730-20743
0.001
3
6mer
20882-20904
0.001
1
6mer
3113-3138
0.001
4
6mer
25583-25603
0.001
1
6mer
28423-28448
0.001
Not Conserved
6mer
46690-46712
0.001
3
6mer
23474-23494
0.001
3
6mer
19146-19169
0.001
1
6mer
45893-45914
0.001
Not Conserved
6mer
37902-37921
0.001
3
6mer
31907-31924
0.001
2
6mer
23281-23301
0.001
0
6mer
33886-33902
0.001
0
6mer
5204-5219
0.001
1
6mer
34010-34029
0.001
1
6mer
30028-30044
0.001
1
6mer
52260-52278
0.001
1
6mer
36591-36616
0.001
0
6mer
42092-42118
0.001
1
6mer
42145-42161
0.001
4
6mer
25590-25613
0.000
Not Conserved
RP11-6F2.5
hsa-miR-15a-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000469196
Biotype: lincRNA
Gene id: ENSG00000241544
Gene Name: RP11-6F2.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Liver Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1360-1386
0.048
1
RP11-687F6.5
hsa-miR-15a-5p
0.906
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000621730
Biotype: lincRNA
Gene id: ENSG00000274776
Gene Name: RP11-687F6.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
93-117
0.045
2
6mer
1252-1267
0.003
1
LCMT1-AS2
hsa-miR-15a-5p
0.905
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565214
Biotype: antisense
Gene id: ENSG00000260034
Gene Name: LCMT1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1787-1807
0.024
1
6mer
5360-5385
0.014
1
6mer
1614-1627
0.005
1
6mer
4183-4203
0.004
1
RP5-991G20.1
hsa-miR-15a-5p
0.905
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000563328
Biotype: antisense
Gene id: ENSG00000259768
Gene Name: RP5-991G20.1
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-15a-5p
Sequence: uagcagcacauaaugguuugug
MirBase ID: MIMAT0000068
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
793-813
0.014
10
7mer
1782-1808
0.004
4
7mer
1350-1367
0.003
9
7mer
1350-1364
0.003
11
6mer
1287-1313
0.003
8
7mer
1321-1334
0.003
6
7mer
1321-1337
0.002
7
7mer
1350-1361
0.002
8
7mer
1321-1340
0.002
5
7mer
1321-1343
0.002
4
7mer
1297-1319
0.002
5
7mer
1799-1811
0.001
4
7mer
1297-1316
0.001
4
6mer
1347-1358
0.001
7
7mer
1874-1889
0.001
2
7mer
1873-1895
0.001
4
6mer
1838-1852
0.001
6
7mer
1873-1892
0.001
2
6mer
1851-1871
0.001
6
7mer
1873-1898
0.001
3
7mer
1895-1904
0.001
1
7mer
1874-1901
0.000
1
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept